Pregenerated sensors for OR3A1 (Homo sapiens)
Ensembl gene IDs: ENSG00000180090Ensembl transcript IDs: ENST00000323404.2, ENST00000615105.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTCAGCACTCACAGCTTCCTAGGTTTCACCTCTAGCCAGAAAGGAGAGAACACGTCCTTCTTATGCCCATaGAACAGAAACAGGTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: VSTHSFLGFTSSQKGENTSFLCP*NRNRCE Trigger: TTCACACCTGTTTCTGTTTCATGGGCATAAGAAGGA...CGTGTTCTCTCCTTTCTGGCTAGAGGTGAAACCTAGGAAGCTGTGAGTGCTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAGAACACGGTGCCTGAAGCTGAATTTGTCTAAGGGGCTGGCTTGGCAGATCCTCATTGCTTATAATTaGACAGGGCTGCTTTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: ERTRCLKLNLSKGLAWQILIAYN*TGLLSE Trigger: TTCTGAAAGCAGCCCTGTCCAATTATAAGCAATGAG...GATCTGCCAAGCCAGCCCCTTAGACAAATTCAGCTTCAGGCACCGTGTTCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| 3UTR-3UTR TCA 90 bp | GTCAGCACTCACAGCTTCCTAGGTTTCACCTCTAGCCAGAAAGGAGAGAACACGGGCTGCTTTCAGAAATaGAAACTATTATTCCCTACA | + |
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Preference number: 2 (lower is better) Translates to: VSTHSFLGFTSSQKGENTGCFQK*KLLFPT Trigger: TGTAGGGAATAATAGTTTTCATTTCTGAAAGCAGCC...CGTGTTCTCTCCTTTCTGGCTAGAGGTGAAACCTAGGAAGCTGTGAGTGCTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| 3UTR TCA 72 bp | GCTGTAACCAACCAAAGAGTCATTCCTTCTGGAACATaGACCTGTCAGCACTCACAGCTTCCTAGGTTTCAC | + |
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Preference number: 3 (lower is better) Translates to: AVTNQRVIPSGT*TCQHSQLPRFH Trigger: GTGAAACCTAGGAAGCTGTGAGTGCTGACAGGTTCATGTTCCAGAAGGAATGACTCTTTGGTTGGTTACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR TCA 90 bp | GAGAGAACACGGTGCCTGAAGCTGAATTTGTCTAAGGGGCTGGCTTGGCAGATCACCTCCTCAAGCCAGTaGCCGCCTCCCTGTGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: ERTRCLKLNLSKGLAWQITSSSQ*PPPCEH Trigger: ATGCTCACAGGGAGGCGGTCACTGGCTTGAGGAGGT...GATCTGCCAAGCCAGCCCCTTAGACAAATTCAGCTTCAGGCACCGTGTTCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR GCA 90 bp | TTCCTTCTGGAACATGAACCTGTCAGCACTCACAGCTTCCTAGGTTTCACCTCTGGCCCCACAGGGAACTaGACGCTTGCGGGACAGGAG | + |
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Preference number: 4 (lower is better) Translates to: FLLEHEPVSTHSFLGFTSGPTGN*TLAGQE Trigger: CTCCTGTCCCGCAAGCGTGCAGTTCCCTGTGGGGCC...AGAGGTGAAACCTAGGAAGCTGTGAGTGCTGACAGGTTCATGTTCCAGAAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR CCA 90 bp | GTCAGCACTCACAGCTTCCTAGGTTTCACCTCTAGCCAGAAAGGAGAGAACACGGAGCACAAAGACAACTaGCTGCAGCCCTGGCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: VSTHSFLGFTSSQKGENTEHKDN*LQPWRL Trigger: GAGGCGCCAGGGCTGCAGCCAGTTGTCTTTGTGCTC...CGTGTTCTCTCCTTTCTGGCTAGAGGTGAAACCTAGGAAGCTGTGAGTGCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR TCA 90 bp | TTCCTTCTGGAACATGAACCTGTCAGCACTCACAGCTTCCTAGGTTTCACCTCTGTGACCGCCTCCCTGTaGGCATCCTCCAGATGGCAC | + |
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Preference number: 4 (lower is better) Translates to: FLLEHEPVSTHSFLGFTSVTASL*ASSRWH Trigger: GTGCCATCTGGAGGATGCTCACAGGGAGGCGGTCAC...AGAGGTGAAACCTAGGAAGCTGTGAGTGCTGACAGGTTCATGTTCCAGAAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR GCA 90 bp | GTCAGCACTCACAGCTTCCTAGGTTTCACCTCTAGCCAGAAAGGAGAGAACACGAGGGAACTGCACGCTTaGGGGACAGGAGACGACTCA | + |
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Preference number: 4 (lower is better) Translates to: VSTHSFLGFTSSQKGENTRELHA*GTGDDS Trigger: TGAGTCGTCTCCTGTCCCGCAAGCGTGCAGTTCCCT...CGTGTTCTCTCCTTTCTGGCTAGAGGTGAAACCTAGGAAGCTGTGAGTGCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR TCA 90 bp | GTCAGCACTCACAGCTTCCTAGGTTTCACCTCTAGCCAGAAAGGAGAGAACACGGCTGCCCTTATTGAGTaGTCCTGGATCCCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: VSTHSFLGFTSSQKGENTAALIE*SWIPAP Trigger: TGGAGCAGGGATCCAGGATCACTCAATAAGGGCAGC...CGTGTTCTCTCCTTTCTGGCTAGAGGTGAAACCTAGGAAGCTGTGAGTGCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR TCA 90 bp | GTCAGCACTCACAGCTTCCTAGGTTTCACCTCTAGCCAGAAAGGAGAGAACACGTCAGGCTGCCCTTATTaGGTGATCCTGGATCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: VSTHSFLGFTSSQKGENTSGCPY*VILDPC Trigger: GCAGGGATCCAGGATCACTCAATAAGGGCAGCCTGA...CGTGTTCTCTCCTTTCTGGCTAGAGGTGAAACCTAGGAAGCTGTGAGTGCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR TCA 90 bp | GAGAGAACACGGTGCCTGAAGCTGAATTTGTCTAAGGGGCTGGCTTGGCAGATCGGAGAAAGGGTCAATTaGGACCTCCTCAAGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: ERTRCLKLNLSKGLAWQIGERVN*DLLKPV Trigger: CACTGGCTTGAGGAGGTCTCAATTGACCCTTTCTCC...GATCTGCCAAGCCAGCCCCTTAGACAAATTCAGCTTCAGGCACCGTGTTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR TCA 90 bp | TTCCTTCTGGAACATGAACCTGTCAGCACTCACAGCTTCCTAGGTTTCACCTCTCTCAGGCATCCAGCTTaGGGCTCAGGCTGCCCTTAT | + |
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Preference number: 4 (lower is better) Translates to: FLLEHEPVSTHSFLGFTSLRHPA*GSGCPY Trigger: ATAAGGGCAGCCTGAGCCTCAAGCTGGATGCCTGAG...AGAGGTGAAACCTAGGAAGCTGTGAGTGCTGACAGGTTCATGTTCCAGAAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR CCA 90 bp | GTCAGCACTCACAGCTTCCTAGGTTTCACCTCTAGCCAGAAAGGAGAGAACACGGGCTGCATGAGTTCCTaGATTACCACTCTCAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: VSTHSFLGFTSSQKGENTGCMSS*ITTLRH Trigger: ATGCCTGAGAGTGGTAATCCAGGAACTCATGCAGCC...CGTGTTCTCTCCTTTCTGGCTAGAGGTGAAACCTAGGAAGCTGTGAGTGCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR CCA 90 bp | GAGAGAACACGGTGCCTGAAGCTGAATTTGTCTAAGGGGCTGGCTTGGCAGATCCCCCTGTCTATGCTATaGGGTCCTTGTTTAATGGGA | + |
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Preference number: 4 (lower is better) Translates to: ERTRCLKLNLSKGLAWQIPLSML*GPCLMG Trigger: TCCCATTAAACAAGGACCCCATAGCATAGACAGGGG...GATCTGCCAAGCCAGCCCCTTAGACAAATTCAGCTTCAGGCACCGTGTTCTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR GCA 90 bp | TTCCTTCTGGAACATGAACCTGTCAGCACTCACAGCTTCCTAGGTTTCACCTCTGCCCCAGATTCTGGCTaGATGAGTTCCTGGATTACC | + |
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Preference number: 4 (lower is better) Translates to: FLLEHEPVSTHSFLGFTSAPDSG*MSSWIT Trigger: GGTAATCCAGGAACTCATGCAGCCAGAATCTGGGGC...AGAGGTGAAACCTAGGAAGCTGTGAGTGCTGACAGGTTCATGTTCCAGAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR CCA 90 bp | GAGAGAACACGGTGCCTGAAGCTGAATTTGTCTAAGGGGCTGGCTTGGCAGATCCCTTGTCTGAAAGCTTaGTTGAACCCAGTCGCATAT | + |
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Preference number: 4 (lower is better) Translates to: ERTRCLKLNLSKGLAWQIPCLKA*LNPVAY Trigger: ATATGCGACTGGGTTCAACCAAGCTTTCAGACAAGG...GATCTGCCAAGCCAGCCCCTTAGACAAATTCAGCTTCAGGCACCGTGTTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR TCA 90 bp | TTCCTTCTGGAACATGAACCTGTCAGCACTCACAGCTTCCTAGGTTTCACCTCTCAGATTCTGGCTGCATaGGTTCCTGGATTACCACTC | + |
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Preference number: 4 (lower is better) Translates to: FLLEHEPVSTHSFLGFTSQILAA*VPGLPL Trigger: GAGTGGTAATCCAGGAACTCATGCAGCCAGAATCTG...AGAGGTGAAACCTAGGAAGCTGTGAGTGCTGACAGGTTCATGTTCCAGAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR TCA 90 bp | GTCAGCACTCACAGCTTCCTAGGTTTCACCTCTAGCCAGAAAGGAGAGAACACGCTTGAGGGAAAAATATaGCTTCTGGCGGGGAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: VSTHSFLGFTSSQKGENTLEGKI*LLAGSF Trigger: AAAACTCCCCGCCAGAAGTCATATTTTTCCCTCAAG...CGTGTTCTCTCCTTTCTGGCTAGAGGTGAAACCTAGGAAGCTGTGAGTGCTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR GCA 90 bp | TTCCTTCTGGAACATGAACCTGTCAGCACTCACAGCTTCCTAGGTTTCACCTCTAGCCATGGGGGTACCTaGCATTATAAAACCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: FLLEHEPVSTHSFLGFTSSHGGT*HYKTHS Trigger: GCTGTGGGTTTTATAATGGCAGGTACCCCCATGGCT...AGAGGTGAAACCTAGGAAGCTGTGAGTGCTGACAGGTTCATGTTCCAGAAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR GCA 90 bp | TTCCTTCTGGAACATGAACCTGTCAGCACTCACAGCTTCCTAGGTTTCACCTCTCTCCAGATGGCACTCTaGACATCAGGGTTTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: FLLEHEPVSTHSFLGFTSLQMAL*TSGFLK Trigger: CTTCAGAAACCCTGATGTGCAGAGTGCCATCTGGAG...AGAGGTGAAACCTAGGAAGCTGTGAGTGCTGACAGGTTCATGTTCCAGAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR CCA 90 bp | TTCCTTCTGGAACATGAACCTGTCAGCACTCACAGCTTCCTAGGTTTCACCTCTATTGGCCCCAGATTCTaGCTGCATGAGTTCCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: FLLEHEPVSTHSFLGFTSIGPRF*LHEFLD Trigger: ATCCAGGAACTCATGCAGCCAGAATCTGGGGCCAAT...AGAGGTGAAACCTAGGAAGCTGTGAGTGCTGACAGGTTCATGTTCCAGAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR TCA 90 bp | TTCCTTCTGGAACATGAACCTGTCAGCACTCACAGCTTCCTAGGTTTCACCTCTATTCCTTCTGGAACATaGACCTGTCAGCACTCACAG | + |
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Preference number: 4 (lower is better) Translates to: FLLEHEPVSTHSFLGFTSIPSGT*TCQHSQ Trigger: CTGTGAGTGCTGACAGGTTCATGTTCCAGAAGGAAT...AGAGGTGAAACCTAGGAAGCTGTGAGTGCTGACAGGTTCATGTTCCAGAAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR CCA 90 bp | TTCCTTCTGGAACATGAACCTGTCAGCACTCACAGCTTCCTAGGTTTCACCTCTACTCCAACGAACAGATaGAAGAAGAAGAGCTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: FLLEHEPVSTHSFLGFTSTPTNR*KKKSWV Trigger: TACCCAGCTCTTCTTCTTCCATCTGTTCGTTGGAGT...AGAGGTGAAACCTAGGAAGCTGTGAGTGCTGACAGGTTCATGTTCCAGAAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR CCA 90 bp | TTCCTTCTGGAACATGAACCTGTCAGCACTCACAGCTTCCTAGGTTTCACCTCTATTTGTCTAAGGGGCTaGCTTGGCAGATCCTATACA | + |
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Preference number: 4 (lower is better) Translates to: FLLEHEPVSTHSFLGFTSICLRG*LGRSYT Trigger: TGTATAGGATCTGCCAAGCCAGCCCCTTAGACAAAT...AGAGGTGAAACCTAGGAAGCTGTGAGTGCTGACAGGTTCATGTTCCAGAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR TCA 90 bp | TTCCTTCTGGAACATGAACCTGTCAGCACTCACAGCTTCCTAGGTTTCACCTCTTCCTTCTTATGCCCATaGAACAGAAACAGGTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: FLLEHEPVSTHSFLGFTSSFLCP*NRNRCE Trigger: TTCACACCTGTTTCTGTTTCATGGGCATAAGAAGGA...AGAGGTGAAACCTAGGAAGCTGTGAGTGCTGACAGGTTCATGTTCCAGAAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR GCA 90 bp | TTCCTTCTGGAACATGAACCTGTCAGCACTCACAGCTTCCTAGGTTTCACCTCTCACACAGGTATCAGGTaGTCCAGAATTACTAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: FLLEHEPVSTHSFLGFTSHTGIR*SRITRE Trigger: TTCTCTAGTAATTCTGGAGCACCTGATACCTGTGTG...AGAGGTGAAACCTAGGAAGCTGTGAGTGCTGACAGGTTCATGTTCCAGAAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR CCA 90 bp | TTCCTTCTGGAACATGAACCTGTCAGCACTCACAGCTTCCTAGGTTTCACCTCTAAGAGTCATTCCTTCTaGAACATGAACCTGTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: FLLEHEPVSTHSFLGFTSKSHSF*NMNLSA Trigger: TGCTGACAGGTTCATGTTCCAGAAGGAATGACTCTT...AGAGGTGAAACCTAGGAAGCTGTGAGTGCTGACAGGTTCATGTTCCAGAAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR CCA 90 bp | TTCCTTCTGGAACATGAACCTGTCAGCACTCACAGCTTCCTAGGTTTCACCTCTCTCATTGCTTATAATTaGACAGGGCTGCTTTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: FLLEHEPVSTHSFLGFTSLIAYN*TGLLSE Trigger: TTCTGAAAGCAGCCCTGTCCAATTATAAGCAATGAG...AGAGGTGAAACCTAGGAAGCTGTGAGTGCTGACAGGTTCATGTTCCAGAAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR CAA 90 bp | GTCAGCACTCACAGCTTCCTAGGTTTCACCTCTAGCCAGAAAGGAGAGAACACGCAGGGAACTGCACGCTaGCGGGACAGGAGACGACTC | + |
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Preference number: 5 (lower is better) Translates to: VSTHSFLGFTSSQKGENTQGTAR*RDRRRL Trigger: GAGTCGTCTCCTGTCCCGCAAGCGTGCAGTTCCCTG...CGTGTTCTCTCCTTTCTGGCTAGAGGTGAAACCTAGGAAGCTGTGAGTGCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS TCA 90 bp | ACAAGACACAGGGAGAAAGGGTCAATTGAGACCTCCTCAAGCCAGTaGCCGCCTCCCTGTGAGCATCCTCCAGATGGCACTCTGCACATC | + |
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Preference number: 5 (lower is better) Translates to: TRHREKGSIETSSSQ*PPPCEHPPDGTLHI Trigger: GATGTGCAGAGTGCCATCTGGAGGATGCTCACAGGGAGGCGGTCACTGGCTTGAGGAGGTCTCAATTGACCCTTTCTCCCTGTGTCTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR CAA 90 bp | GAGAGAACACGGTGCCTGAAGCTGAATTTGTCTAAGGGGCTGGCTTGGCAGATCCTCAGGCTGCCCTTATaGAGTGATCCTGGATCCCTG | + |
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Preference number: 5 (lower is better) Translates to: ERTRCLKLNLSKGLAWQILRLPL*SDPGSL Trigger: CAGGGATCCAGGATCACTCAATAAGGGCAGCCTGAG...GATCTGCCAAGCCAGCCCCTTAGACAAATTCAGCTTCAGGCACCGTGTTCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR CAA 90 bp | GTCAGCACTCACAGCTTCCTAGGTTTCACCTCTAGCCAGAAAGGAGAGAACACGTCTCAGGCATCCAGCTaGAGGCTCAGGCTGCCCTTA | + |
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Preference number: 5 (lower is better) Translates to: VSTHSFLGFTSSQKGENTSQASS*RLRLPL Trigger: TAAGGGCAGCCTGAGCCTCAAGCTGGATGCCTGAGA...CGTGTTCTCTCCTTTCTGGCTAGAGGTGAAACCTAGGAAGCTGTGAGTGCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR CAA 90 bp | TTCCTTCTGGAACATGAACCTGTCAGCACTCACAGCTTCCTAGGTTTCACCTCTGCAATGACTGTTCCATaGGCCCCAGATTCTGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: FLLEHEPVSTHSFLGFTSAMTVP*APDSGC Trigger: GCAGCCAGAATCTGGGGCCAATGGAACAGTCATTGC...AGAGGTGAAACCTAGGAAGCTGTGAGTGCTGACAGGTTCATGTTCCAGAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR CAA 90 bp | GTCAGCACTCACAGCTTCCTAGGTTTCACCTCTAGCCAGAAAGGAGAGAACACGTCCTTGTCTGAAAGCTaGGTTGAACCCAGTCGCATA | + |
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Preference number: 5 (lower is better) Translates to: VSTHSFLGFTSSQKGENTSLSES*VEPSRI Trigger: TATGCGACTGGGTTCAACCAAGCTTTCAGACAAGGA...CGTGTTCTCTCCTTTCTGGCTAGAGGTGAAACCTAGGAAGCTGTGAGTGCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR CAA 90 bp | TTCCTTCTGGAACATGAACCTGTCAGCACTCACAGCTTCCTAGGTTTCACCTCTTGCCTGAAGCTGAATTaGTCTAAGGGGCTGGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: FLLEHEPVSTHSFLGFTSCLKLN*SKGLAW Trigger: CCAAGCCAGCCCCTTAGACAAATTCAGCTTCAGGCA...AGAGGTGAAACCTAGGAAGCTGTGAGTGCTGACAGGTTCATGTTCCAGAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR CAA 90 bp | GTCAGCACTCACAGCTTCCTAGGTTTCACCTCTAGCCAGAAAGGAGAGAACACGTGTCTGAAAGCTTGGTaGAACCCAGTCGCATATAGT | + |
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Preference number: 5 (lower is better) Translates to: VSTHSFLGFTSSQKGENTCLKAW*NPVAYS Trigger: ACTATATGCGACTGGGTTCAACCAAGCTTTCAGACA...CGTGTTCTCTCCTTTCTGGCTAGAGGTGAAACCTAGGAAGCTGTGAGTGCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR CAA 90 bp | GAGAGAACACGGTGCCTGAAGCTGAATTTGTCTAAGGGGCTGGCTTGGCAGATCTATGCTATGGGGTCCTaGTTTAATGGGAATAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: ERTRCLKLNLSKGLAWQIYAMGS*FNGNRK Trigger: CTTTCTATTCCCATTAAACAAGGACCCCATAGCATA...GATCTGCCAAGCCAGCCCCTTAGACAAATTCAGCTTCAGGCACCGTGTTCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS-3UTR CAA 90 bp | GTCAGCACTCACAGCTTCCTAGGTTTCACCTCTAGCCAGAAAGGAGAGAACACGGGATTGATGACAGTGTaGAAAATTCCAACAGCTTTA | + |
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Preference number: 5 (lower is better) Translates to: VSTHSFLGFTSSQKGENTGLMTV*KIPTAL Trigger: TAAAGCTGTTGGAATTTTCAACACTGTCATCAATCC...CGTGTTCTCTCCTTTCTGGCTAGAGGTGAAACCTAGGAAGCTGTGAGTGCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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| CDS CAA 72 bp | AGCTGGGTAAGGCAGGCCCCACAGGGAACTGCACGCTaGCGGGACAGGAGACGACTCAACATTGATGGAACA | + |
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Preference number: 6 (lower is better) Translates to: SWVRQAPQGTAR*RDRRRLNIDGT Trigger: TGTTCCATCAATGTTGAGTCGTCTCCTGTCCCGCAAGCGTGCAGTTCCCTGTGGGGCCTGCCTTACCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000323404.2 ENST00000615105.1 |
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| CDS CAA 72 bp | TTTCCTTTAGTACAAGACACAGGGAGAAAGGGTCAATaGAGACCTCCTCAAGCCAGTGACCGCCTCCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: FPLVQDTGRKGQ*RPPQASDRLPV Trigger: CACAGGGAGGCGGTCACTGGCTTGAGGAGGTCTCAATTGACCCTTTCTCCCTGTGTCTTGTACTAAAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323404.2 |
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