Pregenerated sensors for OR2Y1 (Homo sapiens)
Ensembl gene IDs: ENSG00000174339Ensembl transcript IDs: ENST00000307832.2, ENST00000307832.3
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | CAACTGCCCTCCAAGGAACAGGGAAAGATCTGTGATTaGAGAGCTATTACAGAAAATTTTACTGCTCATTTT | + |
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Preference number: 3 (lower is better) Translates to: QLPSKEQGKICD*RAITENFTAHF Trigger: AAAATGAGCAGTAAAATTTTCTGTAATAGCTCTTCAATCACAGATCTTTCCCTGTTCCTTGGAGGGCAGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307832.2 |
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| CDS CCA 90 bp | TTCAGTCGATGGCCACAGAGAGGCATGGCCATTGCGAGACCTGTCTaGATCAGAGAGTTCACGAAACCCGCACCCCAGGAGGCGATAGCC | + |
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Preference number: 5 (lower is better) Translates to: FSRWPQRGMAIARPV*IREFTKPAPQEAIA Trigger: GGCTATCGCCTCCTGGGGTGCGGGTTTCGTGAACTCTCTGATCCAGACAGGTCTCGCAATGGCCATGCCTCTCTGTGGCCATCGACTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307832.3 |
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| CDS GCA 90 bp | ACAGAAGAAGTGATTCAGTCGATGGCCACAGAGAGGCATGGCCATTaGGAGACCTGTCTGGATCAGAGAGTTCACGAAACCCGCACCCCA | + |
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Preference number: 5 (lower is better) Translates to: TEEVIQSMATERHGH*ETCLDQRVHETRTP Trigger: TGGGGTGCGGGTTTCGTGAACTCTCTGATCCAGACAGGTCTCGCAATGGCCATGCCTCTCTGTGGCCATCGACTGAATCACTTCTTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307832.3 |
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| CDS CCA 90 bp | GCATCTCACAGAAGAAGTGATTCAGTCGATGGCCACAGAGAGGCATaGCCATTGCGAGACCTGTCTGGATCAGAGAGTTCACGAAACCCG | + |
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Preference number: 5 (lower is better) Translates to: ASHRRSDSVDGHREA*PLRDLSGSESSRNP Trigger: CGGGTTTCGTGAACTCTCTGATCCAGACAGGTCTCGCAATGGCCATGCCTCTCTGTGGCCATCGACTGAATCACTTCTTCTGTGAGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307832.3 |
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| CDS CAA 72 bp | CCTCCACGGGTGATGGTGCGGTCCACCCCGCAAAGGTaGATCAGGAGCTGGGGCACGGTGCTGGTGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PPRVMVRSTPQR*IRSWGTVLVVK Trigger: CTTCACCACCAGCACCGTGCCCCAGCTCCTGATCAACCTTTGCGGGGTGGACCGCACCATCACCCGTGGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307832.3 |
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| CDS CAA 90 bp | CACAGAAGAAGTGATTCAGTCGATGGCCACAGAGAGGCATGGCCATaGCGAGACCTGTCTGGATCAGAGAGTTCACGAAACCCGCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: HRRSDSVDGHREAWP*RDLSGSESSRNPHP Trigger: GGGGTGCGGGTTTCGTGAACTCTCTGATCCAGACAGGTCTCGCAATGGCCATGCCTCTCTGTGGCCATCGACTGAATCACTTCTTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307832.3 |
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| CDS CAA 72 bp | GGAACAGCCACGACTATGACTCGGGCCACAAACATCTaGGCCTCTGTTCCTTCTGTGTCCGCACAAGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: GTATTMTRATNI*ASVPSVSAQAN Trigger: GTTGGCTTGTGCGGACACAGAAGGAACAGAGGCCAAGATGTTTGTGGCCCGAGTCATAGTCGTGGCTGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307832.3 |
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| CDS GCA 72 bp | GTGATTCAGTCGATGGCCACAGAGAGGCATGGCCATTaGGAGACCTGTCTGGATCAGAGAGTTCACGAAACC | + |
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Preference number: 6 (lower is better) Translates to: VIQSMATERHGH*ETCLDQRVHET Trigger: GGTTTCGTGAACTCTCTGATCCAGACAGGTCTCGCAATGGCCATGCCTCTCTGTGGCCATCGACTGAATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307832.3 |
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| CDS CAA 90 bp | AGTGCTGCAGGAACAGCCACGACTATGACTCGGGCCACAAACATCTaGGCCTCTGTTCCTTCTGTGTCCGCACAAGCCAACTTCAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: SAAGTATTMTRATNI*ASVPSVSAQANFRN Trigger: ATTTCTGAAGTTGGCTTGTGCGGACACAGAAGGAACAGAGGCCAAGATGTTTGTGGCCCGAGTCATAGTCGTGGCTGTTCCTGCAGCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307832.3 |
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| CDS CCA 72 bp | AGAAGAAGTGATTCAGTCGATGGCCACAGAGAGGCATaGCCATTGCGAGACCTGTCTGGATCAGAGAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: RRSDSVDGHREA*PLRDLSGSESS Trigger: TGAACTCTCTGATCCAGACAGGTCTCGCAATGGCCATGCCTCTCTGTGGCCATCGACTGAATCACTTCTTCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307832.3 |
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| CDS TCA 72 bp | AAAGACAAACAGGATGGGCTCCAGTTGCGGCCAATCTaGGAATCCCACCAAAATGAAGCCATCTTCAAAACT | + |
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Preference number: 6 (lower is better) Translates to: KDKQDGLQLRPI*ESHQNEAIFKT Trigger: AGTTTTGAAGATGGCTTCATTTTGGTGGGATTCTCAGATTGGCCGCAACTGGAGCCCATCCTGTTTGTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307832.3 |
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| CDS CCA 72 bp | CAACAAATTTTCCCTCACGCTCAGAATAATTGTGGATaGATTGGAGATATGTGTAGATGGCTGAGCCATAAA | + |
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Preference number: 6 (lower is better) Translates to: QQIFPHAQNNCG*IGDMCRWLSHK Trigger: TTTATGGCTCAGCCATCTACACATATCTCCAATCCATCCACAATTATTCTGAGCGTGAGGGAAAATTTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307832.3 |
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