RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR2V2 (Homo sapiens)

Ensembl gene IDs: ENSG00000182613

Ensembl transcript IDs: ENST00000641492.1, ENST00000641791.1

Found 194 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTaGACGATGAGGCAGGGACTTACCGATTTGAGCCCTAGCTTCCTC +
Preference number: 1 (lower is better)
Translates to: ALTNQSFPWGGEEEN*TMRQGLTDLSPSFL
Trigger: GAGGAAGCTAGGGCTCAAATCGGTAAGTCCCTGCCTCATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR TCA 90 bp GCTCATCTCAGCTGCGCTGACAAACCAGTCTTTCCCATGGGGAGGTaGAGAAGAAAACTGGACGATGAGGCAGGGACTTACCGATTTGAG +
Preference number: 1 (lower is better)
Translates to: AHLSCADKPVFPMGR*RRKLDDEAGTYRFE
Trigger: CTCAAATCGGTAAGTCCCTGCCTCATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGCAGCTGAGATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR TCA 90 bp AGGGAAGGAGCCTCCTCCGAAGTTGTTTGCTCATCTCAGCTGCGCTaGCAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGA +
Preference number: 1 (lower is better)
Translates to: REGASSEVVCSSQLR*QTSLSHGEVKKKTG
Trigger: TCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGCAGCTGAGATGAGCAAACAACTTCGGAGGAGGCTCCTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR CCA 90 bp AGTTGTTTGCTCATCTCAGCTGCGCTGACAAACCAGTCTTTCCCATaGGGAGGTGAAGAAGAAAACTGGACGATGAGGCAGGGACTTACC +
Preference number: 1 (lower is better)
Translates to: SCLLISAALTNQSFP*GGEEENWTMRQGLT
Trigger: GGTAAGTCCCTGCCTCATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGCAGCTGAGATGAGCAAACAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR CCA 90 bp TTGATTAGTGAACTGAAGTGTGTGCCTGGACATAAGAGGACCCTGTaGAACCTTTTTGTGACATGGAACTTACCACATTTCTGGGTGCTA +
Preference number: 1 (lower is better)
Translates to: LISELKCVPGHKRTL*NLFVTWNLPHFWVL
Trigger: TAGCACCCAGAAATGTGGTAAGTTCCATGTCACAAAAAGGTTCCACAGGGTCCTCTTATGTCCAGGCACACACTTCAGTTCACTAATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR GCA 90 bp GCAAAATCCCAGAGAAATCTGAGTGGGCATGAGGTTAATCAGGGATaGTTCCTGGAAGAGAAGAATTTGGGGCAAATAGAAATGTGTACA +
Preference number: 1 (lower is better)
Translates to: AKSQRNLSGHEVNQG*FLEEKNLGQIEMCT
Trigger: TGTACACATTTCTATTTGCCCCAAATTCTTCTCTTCCAGGAAGCATCCCTGATTAACCTCATGCCCACTCAGATTTCTCTGGGATTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR TCA 90 bp CTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCTTACTGCTAGGACGTGGTaGGGAGACAGCAGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: LGFSLILRTSSGLFSLRLTARTW*GDSRLG
Trigger: CCCAAGCCTGCTGTCTCCTCACCACGTCCTAGCAGT...AAGGCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR TCA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCAGTTGGAGACTCACCTaGGCCCAGGAGATCAAGGCT +
Preference number: 2 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRSWRLT*AQEIKA
Trigger: AGCCTTGATCTCCTGGGCTCAGGTGAGTCTCCAACT...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR TCA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCAGCTACTCAGGAGGCTaGGTTGGAGACTCACCTGAG +
Preference number: 2 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRSYSGG*VGDSPE
Trigger: CTCAGGTGAGTCTCCAACTCAGCCTCCTGAGTAGCT...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR TCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGAGTTGGAGACTCACCTaGGCCCAGGAGATCAAGGCT +
Preference number: 2 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMSWRLT*AQEIKA
Trigger: AGCCTTGATCTCCTGGGCTCAGGTGAGTCTCCAACT...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR TCA 90 bp GTGGGATCTACGTCTACACATAGATCACAGAGCGAAGTCTCCCACAGAGTAAGCAGCTACTCAGGAGGCTaGGTTGGAGACTCACCTGAG +
Preference number: 2 (lower is better)
Translates to: VGSTSTHRSQSEVSHRVSSYSGG*VGDSPE
Trigger: CTCAGGTGAGTCTCCAACTCAGCCTCCTGAGTAGCT...GCTTACTCTGTGGGAGACTTCGCTCTGTGATCTATGTGTAGACGTAGATCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR TCA 90 bp GTGGGATCTACGTCTACACATAGATCACAGAGCGAAGTCTCCCACAGAGTAAGCGGAAGGTGGATTGCTTaGGTCCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: VGSTSTHRSQSEVSHRVSGRWIA*VQEFET
Trigger: GGTCTCGAACTCCTGGACTCAAGCAATCCACCTTCC...GCTTACTCTGTGGGAGACTTCGCTCTGTGATCTATGTGTAGACGTAGATCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR CAA 90 bp CTTTTCAGGCAATTAAACCCCCAAGGGAAGGAGCCTCCTCCGAAGTaGTTTGCTCATCTCAGCTGCGCTGACAAACCAGTCTTTCCCATG +
Preference number: 2 (lower is better)
Translates to: LFRQLNPQGKEPPPK*FAHLSCADKPVFPM
Trigger: CATGGGAAAGACTGGTTTGTCAGCGCAGCTGAGATGAGCAAACAACTTCGGAGGAGGCTCCTTCCCTTGGGGGTTTAATTGCCTGAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR TCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGTTACAGAAGCTGAGCTaGCACAGAGCAGCACACACT +
Preference number: 2 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMLQKLS*HRAAHT
Trigger: AGTGTGTGCTGCTCTGTGTCAGCTCAGCTTCTGTAA...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR TCA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCTTGGGGGATTTCCACTaGATACACAAGCAAGCATGT +
Preference number: 2 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRLGDFH*IHKQAC
Trigger: ACATGCTTGCTTGTGTATTCAGTGGAAATCCCCCAA...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR CCA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCAGAGCTTGGAAGGATaGATACAAGTCCTGCAAATA +
Preference number: 2 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRQSLEG*IQVLQI
Trigger: TATTTGCAGGACTTGTATCCATCCTTCCAAGCTCTG...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR CCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGCAGAGCTTGGAAGGATaGATACAAGTCCTGCAAATA +
Preference number: 2 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMQSLEG*IQVLQI
Trigger: TATTTGCAGGACTTGTATCCATCCTTCCAAGCTCTG...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR TCA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCTTTAATACGTCTTTATaGAGTTTCCAGTGTGAGGAG +
Preference number: 2 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRFNTSL*SFQCEE
Trigger: CTCCTCACACTGGAAACTTCATAAAGACGTATTAAA...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR TCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTACTGCTAGGACGTGGTaGGGAGACAGCAGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSTARTW*GDSRLG
Trigger: CCCAAGCCTGCTGTCTCCTCACCACGTCCTAGCAGT...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR TCA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCTTTTCAAATAGCAGATaGAATTCTGTCACCATGCTC +
Preference number: 2 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRFSNSR*NSVTML
Trigger: GAGCATGGTGACAGAATTTCATCTGCTATTTGAAAA...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR TCA 90 bp GGGGGATTTCCACTGAATACACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATTTAATACGTCTTTATaGAGTTTCCAGTGTGAGGAG +
Preference number: 2 (lower is better)
Translates to: GGFPLNTQASMSLPCPSLFNTSL*SFQCEE
Trigger: CTCCTCACACTGGAAACTTCATAAAGACGTATTAAA...TAATGAGGGACAGGGTAGAGACATGCTTGCTTGTGTATTCAGTGGAAATCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR CCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTAGGAGACAGCAGGCTTaGGGGATTTCCACTGAATAC +
Preference number: 2 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSRRQQA*GISTEY
Trigger: GTATTCAGTGGAAATCCCCCAAGCCTGCTGTCTCCT...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR TCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTTTTCCCATGGGGAGGTaGAGAAGAAAACTGGACGAT +
Preference number: 2 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSFPMGR*RRKLDD
Trigger: ATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAA...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR CCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTGGTGAAGAAGAAAACTaGACGATGAGGCAGGGACTT +
Preference number: 2 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSGEEEN*TMRQGL
Trigger: AAGTCCCTGCCTCATCGTCCAGTTTTCTTCTTCACC...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR TCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTAATCTTGCAGCCCCGTaGCTAAGGAAAGTTACTTCT +
Preference number: 2 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSNLAAP*LRKVTS
Trigger: AGAAGTAACTTTCCTTAGTCACGGGGCTGCAAGATT...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR CAA 90 bp GCTTATTTTCTGTCATCTGTAAGTTGTTCATTTAAGACCCTAGGGTaGGGCTACAACTGTTGTGAGACATCATATAAACATCATGCAGGT +
Preference number: 2 (lower is better)
Translates to: AYFLSSVSCSFKTLG*GYNCCETSYKHHAG
Trigger: ACCTGCATGATGTTTATATGATGTCTCACAACAGTTGTAGCCCAACCCTAGGGTCTTAAATGAACAACTTACAGATGACAGAAAATAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR GCA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGCCAATGTCTTATTTCTaGACAGTGCTGATTTACAAT +
Preference number: 2 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMPMSYF*TVLIYN
Trigger: ATTGTAAATCAGCACTGTGCAGAAATAAGACATTGG...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR CAA 90 bp TTCCATGAAAAGAGAATTTTACTGCAAATAGGACAGGTACAGAGCTaGGAAGGATGGATACAAGTCCTGCAAATAGTTCACACTGAAATT +
Preference number: 2 (lower is better)
Translates to: FHEKRILLQIGQVQS*EGWIQVLQIVHTEI
Trigger: AATTTCAGTGTGAACTATTTGCAGGACTTGTATCCATCCTTCCAAGCTCTGTACCTGTCCTATTTGCAGTAAAATTCTCTTTTCATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR TCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTTTTTCAAATAGCAGATaGAATTCTGTCACCATGCTC +
Preference number: 2 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSFSNSR*NSVTML
Trigger: GAGCATGGTGACAGAATTTCATCTGCTATTTGAAAA...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR TCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTATAAAGAGTTGTGGTTaGAACACTCAAGGTACTTAC +
Preference number: 2 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSIKSCG*NTQGTY
Trigger: GTAAGTACCTTGAGTGTTTCAACCACAACTCTTTAT...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR CCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTAGTGATATCAGCAAGTaGTCACAGAATACACTAAGA +
Preference number: 2 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSSDISK*SQNTLR
Trigger: TCTTAGTGTATTCTGTGACCACTTGCTGATATCACT...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR GCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTCCAATGTCTTATTTCTaGACAGTGCTGATTTACAAT +
Preference number: 2 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSPMSYF*TVLIYN
Trigger: ATTGTAAATCAGCACTGTGCAGAAATAAGACATTGG...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR CAA 90 bp CAGCACACACTGCTAGGACGTGGTGAGGAGACAGCAGGCTTGGGGGATTTCCACTGGAAGGTGGATTGCTaGAGTCCAGGAGTTCGAGAC +
Preference number: 3 (lower is better)
Translates to: QHTLLGRGEETAGLGDFHWKVDC*SPGVRD
Trigger: GTCTCGAACTCCTGGACTCAAGCAATCCACCTTCCA...GTGGAAATCCCCCAAGCCTGCTGTCTCCTCACCACGTCCTAGCAGTGTGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR TCA 72 bp TCCCAGCTACTCAGGAGGCTGAGTTGGAGACTCACCTaGGCCCAGGAGATCAAGGCTGCTATAAGCCGAGAT +
Preference number: 3 (lower is better)
Translates to: SQLLRRLSWRLT*AQEIKAAISRD
Trigger: ATCTCGGCTTATAGCAGCCTTGATCTCCTGGGCTCAGGTGAGTCTCCAACTCAGCCTCCTGAGTAGCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR CAA 90 bp CAGCACACACTGCTAGGACGTGGTGAGGAGACAGCAGGCTTGGGGGATTTCCACTTTAAGACCCTAGGGTaGGGCTACAACTGTTGTGAG +
Preference number: 3 (lower is better)
Translates to: QHTLLGRGEETAGLGDFHFKTLG*GYNCCE
Trigger: CTCACAACAGTTGTAGCCCAACCCTAGGGTCTTAAA...GTGGAAATCCCCCAAGCCTGCTGTCTCCTCACCACGTCCTAGCAGTGTGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR TCA 72 bp GCCTCCTCCGAAGTTGTTTGCTCATCTCAGCTGCGCTaGCAAACCAGTCTTTCCCATGGGGAGGTGAAGAAG +
Preference number: 3 (lower is better)
Translates to: ASSEVVCSSQLR*QTSLSHGEVKK
Trigger: CTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGCAGCTGAGATGAGCAAACAACTTCGGAGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR GCA 72 bp GAGTTGGAGACTCACCTGAGCCCAGGAGATCAAGGCTaGTATAAGCCGAGATTGTGTCACTGCACTCTAGCC +
Preference number: 3 (lower is better)
Translates to: ELETHLSPGDQG*YKPRLCHCTLA
Trigger: GGCTAGAGTGCAGTGACACAATCTCGGCTTATAGCAGCCTTGATCTCCTGGGCTCAGGTGAGTCTCCAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR TCA 72 bp AGCTGCGCTGACAAACCAGTCTTTCCCATGGGGAGGTaGAGAAGAAAACTGGACGATGAGGCAGGGACTTAC +
Preference number: 3 (lower is better)
Translates to: SCADKPVFPMGR*RRKLDDEAGTY
Trigger: GTAAGTCCCTGCCTCATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR CCA 72 bp CTCATCTCAGCTGCGCTGACAAACCAGTCTTTCCCATaGGGAGGTGAAGAAGAAAACTGGACGATGAGGCAG +
Preference number: 3 (lower is better)
Translates to: LISAALTNQSFP*GGEEENWTMRQ
Trigger: CTGCCTCATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGCAGCTGAGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR CAA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCGGACAGGTACAGAGCTaGGAAGGATGGATACAAGTC +
Preference number: 3 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRGQVQS*EGWIQV
Trigger: GACTTGTATCCATCCTTCCAAGCTCTGTACCTGTCC...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR CCA 72 bp AACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTaGACGATGAGGCAGGGACTTACCGATTTGAGCCCT +
Preference number: 3 (lower is better)
Translates to: NQSFPWGGEEEN*TMRQGLTDLSP
Trigger: AGGGCTCAAATCGGTAAGTCCCTGCCTCATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR CAA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGTTTAAGACCCTAGGGTaGGGCTACAACTGTTGTGAG +
Preference number: 3 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMFKTLG*GYNCCE
Trigger: CTCACAACAGTTGTAGCCCAACCCTAGGGTCTTAAA...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR CAA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGTGGAAGGTGGATTGCTaGAGTCCAGGAGTTCGAGAC +
Preference number: 3 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMWKVDC*SPGVRD
Trigger: GTCTCGAACTCCTGGACTCAAGCAATCCACCTTCCA...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR CCA 72 bp GAACTGAAGTGTGTGCCTGGACATAAGAGGACCCTGTaGAACCTTTTTGTGACATGGAACTTACCACATTTC +
Preference number: 3 (lower is better)
Translates to: ELKCVPGHKRTL*NLFVTWNLPHF
Trigger: GAAATGTGGTAAGTTCCATGTCACAAAAAGGTTCCACAGGGTCCTCTTATGTCCAGGCACACACTTCAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR CAA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTCTCCTCCGAAGTTGTTaGCTCATCTCAGCTGCGCTG +
Preference number: 3 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSLLRSC*LISAAL
Trigger: CAGCGCAGCTGAGATGAGCAAACAACTTCGGAGGAG...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR CCA 72 bp GGACTAGATAAGGTAAAGGCTGGTGAAACTTTTGCTTaGGTGATTATGATCCAAAATTCTGCATCACGGAAG +
Preference number: 3 (lower is better)
Translates to: GLDKVKAGETFA*VIMIQNSASRK
Trigger: CTTCCGTGATGCAGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATCTAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR TCA 72 bp AGAACTGATGTAGTGTTTAAAAAGACCTTCCAAGTCTaGGGGTGTCACAATCATCATAATTCACGAGGAAAC +
Preference number: 3 (lower is better)
Translates to: RTDVVFKKTFQV*GCHNHHNSRGN
Trigger: GTTTCCTCGTGAATTATGATGATTGTGACACCCTCAGACTTGGAAGGTCTTTTTAAACACTACATCAGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR GCA 72 bp GAATACACTAAGATCCATCTACACAGTGGAAAATCTTaGAGCCCCGTGACTAAGGAAAGTTACTTCTATTTT +
Preference number: 3 (lower is better)
Translates to: EYTKIHLHSGKS*SPVTKESYFYF
Trigger: AAAATAGAAGTAACTTTCCTTAGTCACGGGGCTGCAAGATTTTCCACTGTGTAGATGGATCTTAGTGTATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR-3UTR CAA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTGCTATAGATAAAGAGTaGTGGTTGAAACACTCAAGG +
Preference number: 3 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSAIDKE*WLKHSR
Trigger: CCTTGAGTGTTTCAACCACAACTCTTTATCTATAGC...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp CAGCACACACTGCTAGGACGTGGTGAGGAGACAGCAGGCTTGGGGGATTTCCACACTGCTAGGACGTGGTaGGGAGACAGCAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: QHTLLGRGEETAGLGDFHTARTW*GDSRLG
Trigger: CCCAAGCCTGCTGTCTCCTCACCACGTCCTAGCAGT...GTGGAAATCCCCCAAGCCTGCTGTCTCCTCACCACGTCCTAGCAGTGTGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp CAGCACACACTGCTAGGACGTGGTGAGGAGACAGCAGGCTTGGGGGATTTCCACCCATGGCTCGGTTGTTaGTCCTGGTCACCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: QHTLLGRGEETAGLGDFHPWLGC*SWSPVG
Trigger: ACCCACAGGTGACCAGGAGCAACAACCGAGCCATGG...GTGGAAATCCCCCAAGCCTGCTGTCTCCTCACCACGTCCTAGCAGTGTGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp CTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCTTGCTGGCTGCCGATCCTaGAGCGGTCCAGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: LGFSLILRTSSGLFSLRLAGCRS*SGPAPS
Trigger: GGAAGGGGCTGGACCGCTGCAGGATCGGCAGCCAGC...AAGGCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp CAGCACACACTGCTAGGACGTGGTGAGGAGACAGCAGGCTTGGGGGATTTCCACTCACCCACGTCTCCATaGCTCGGTTGTTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QHTLLGRGEETAGLGDFHSPTSP*LGCCSW
Trigger: CCAGGAGCAACAACCGAGCCATGGAGACGTGGGTGA...GTGGAAATCCCCCAAGCCTGCTGTCTCCTCACCACGTCCTAGCAGTGTGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCCCTGGGTTCAGTGCTaGCTGCCGATCCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRPWVQC*LPILQR
Trigger: CCGCTGCAGGATCGGCAGCCAGCACTGAACCCAGGG...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp CAGCACACACTGCTAGGACGTGGTGAGGAGACAGCAGGCTTGGGGGATTTCCACGCCTTTTTCCAGGCCTaGGCAGAGTGCATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: QHTLLGRGEETAGLGDFHAFFQA*AECICS
Trigger: GCTGCAAATGCACTCTGCTCAGGCCTGGAAAAAGGC...GTGGAAATCCCCCAAGCCTGCTGTCTCCTCACCACGTCCTAGCAGTGTGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp GTGGGATCTACGTCTACACATAGATCACAGAGCGAAGTCTCCCACAGAGTAAGCGCTGGCTGCCGATCCTaGAGCGGTCCAGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: VGSTSTHRSQSEVSHRVSAGCRS*SGPAPS
Trigger: GGAAGGGGCTGGACCGCTGCAGGATCGGCAGCCAGC...GCTTACTCTGTGGGAGACTTCGCTCTGTGATCTATGTGTAGACGTAGATCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCAGGCACTGGATGCCCTaGGTTCAGTGCTGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRRHWMP*VQCWLP
Trigger: CGGCAGCCAGCACTGAACCCAGGGCATCCAGTGCCT...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGACGGTAGGCCCTGGGTaGCACTTCCCTCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMTVGPG*HFPPPL
Trigger: GAGAGGTGGAGGGAAGTGGCACCCAGGGCCTACCGT...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGGGCAGAGCCAGGCACTaGATGCCCTGGGTTCAGTGC +
Preference number: 4 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMGRARH*MPWVQC
Trigger: GCACTGAACCCAGGGCATCCAGTGCCTGGCTCTGCC...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp CTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCTTAACCACGGTAGGCCCTaGGTGCCACTTCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: LGFSLILRTSSGLFSLRLNHGRP*VPLPST
Trigger: GGTGGAGGGAAGTGGCACCCAGGGCCTACCGTGGTT...AAGGCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCTGAGTTGCCCTGGCTaGGGTGCAGTGACACTGCAG +
Preference number: 4 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRLSCPG*GAVTLQ
Trigger: CTGCAGTGTCACTGCACCCCAGCCAGGGCAACTCAG...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp CTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCTTATGCCCTGGGTTCAGTaGTGGCTGCCGATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LGFSLILRTSSGLFSLRLMPWVQ*WLPILQ
Trigger: CTGCAGGATCGGCAGCCAGCACTGAACCCAGGGCAT...AAGGCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGATGCCCTGGGTTCAGTaGTGGCTGCCGATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMMPWVQ*WLPILQ
Trigger: CTGCAGGATCGGCAGCCAGCACTGAACCCAGGGCAT...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp GTGGGATCTACGTCTACACATAGATCACAGAGCGAAGTCTCCCACAGAGTAAGCACGGTAGGCCCTGGGTaGCACTTCCCTCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: VGSTSTHRSQSEVSHRVSTVGPG*HFPPPL
Trigger: GAGAGGTGGAGGGAAGTGGCACCCAGGGCCTACCGT...GCTTACTCTGTGGGAGACTTCGCTCTGTGATCTATGTGTAGACGTAGATCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp CTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCTTCTCGGTTGTTGCTCCTaGTCACCTGTGGGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LGFSLILRTSSGLFSLRLLGCCS*SPVGGS
Trigger: GGACCCACCCACAGGTGACCAGGAGCAACAACCGAG...AAGGCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp GTGGGATCTACGTCTACACATAGATCACAGAGCGAAGTCTCCCACAGAGTAAGCGGCAGAGCCAGGCACTaGATGCCCTGGGTTCAGTGC +
Preference number: 4 (lower is better)
Translates to: VGSTSTHRSQSEVSHRVSGRARH*MPWVQC
Trigger: GCACTGAACCCAGGGCATCCAGTGCCTGGCTCTGCC...GCTTACTCTGTGGGAGACTTCGCTCTGTGATCTATGTGTAGACGTAGATCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCGCAATCCTCCCACCTTaGCCTTGGCCTCCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRAILPP*PWPPKV
Trigger: CACTTTGGGAGGCCAAGGCCAAGGTGGGAGGATTGC...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp CTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCTTCACCTCTCCAAAGCCTaGAGCCCAGCAAACACCTCC +
Preference number: 4 (lower is better)
Translates to: LGFSLILRTSSGLFSLRLHLSKA*SPANTS
Trigger: GGAGGTGTTTGCTGGGCTTCAGGCTTTGGAGAGGTG...AAGGCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGCCATGGCTCGGTTGTTaGTCCTGGTCACCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMPWLGC*SWSPVG
Trigger: ACCCACAGGTGACCAGGAGCAACAACCGAGCCATGG...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGAGGATCTCTCTGAGTTaGCCTGGCTGGGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMRISLS*PGWGAV
Trigger: CACTGCACCCCAGCCAGGGCAACTCAGAGAGATCCT...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCCTCAGGACCAGTTCTaGCCTCTTTTCTCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRPQDQF*PLFSPP
Trigger: AGGCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGG...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp CAGCACACACTGCTAGGACGTGGTGAGGAGACAGCAGGCTTGGGGGATTTCCACGGTGAAGAAGAAAACTaGACGATGAGGCAGGGACTT +
Preference number: 4 (lower is better)
Translates to: QHTLLGRGEETAGLGDFHGEEEN*TMRQGL
Trigger: AAGTCCCTGCCTCATCGTCCAGTTTTCTTCTTCACC...GTGGAAATCCCCCAAGCCTGCTGTCTCCTCACCACGTCCTAGCAGTGTGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp CAGCACACACTGCTAGGACGTGGTGAGGAGACAGCAGGCTTGGGGGATTTCCACGATCCATCTACACAGTaGAAAATCTTGCAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: QHTLLGRGEETAGLGDFHDPSTQ*KILQPR
Trigger: ACGGGGCTGCAAGATTTTCCACTGTGTAGATGGATC...GTGGAAATCCCCCAAGCCTGCTGTCTCCTCACCACGTCCTAGCAGTGTGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCGTGATCCTCCCACCTTaGCCTCCCCATTATCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRVILPP*PPHYQL
Trigger: CAGCTGATAATGGGGAGGCCAAGGTGGGAGGATCAC...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGCTCTCTGAGTTGCCCTaGCTGGGGTGCAGTGACACT +
Preference number: 4 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMLSELP*LGCSDT
Trigger: AGTGTCACTGCACCCCAGCCAGGGCAACTCAGAGAG...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGAGCTACTCAGGAGGCTaGGTTGGAGACTCACCTGAG +
Preference number: 4 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMSYSGG*VGDSPE
Trigger: CTCAGGTGAGTCTCCAACTCAGCCTCCTGAGTAGCT...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp CTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCTTGGAAGGTGGATTGCTTaGGTCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: LGFSLILRTSSGLFSLRLGRWIA*VQEFET
Trigger: GGTCTCGAACTCCTGGACTCAAGCAATCCACCTTCC...AAGGCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGTGGAGTGCAGTGGCATaGTCATGGGTCATTGCAGCC +
Preference number: 4 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMWSAVA*SWVIAA
Trigger: GGCTGCAATGACCCATGATCATGCCACTGCACTCCA...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp GTGGGATCTACGTCTACACATAGATCACAGAGCGAAGTCTCCCACAGAGTAAGCTTCGAGACAGGCTTCTaGTCTGTGGCCCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VGSTSTHRSQSEVSHRVSFETGF*SVAQAG
Trigger: TCCAGCCTGGGCCACAGAGCAGAAGCCTGTCTCGAA...GCTTACTCTGTGGGAGACTTCGCTCTGTGATCTATGTGTAGACGTAGATCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGCCTCAGGACCAGTTCTaGCCTCTTTTCTCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMPQDQF*PLFSPP
Trigger: AGGCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGG...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp GTGGGATCTACGTCTACACATAGATCACAGAGCGAAGTCTCCCACAGAGTAAGCGCAATCCTCCCACCTTaGCCTTGGCCTCCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: VGSTSTHRSQSEVSHRVSAILPP*PWPPKV
Trigger: CACTTTGGGAGGCCAAGGCCAAGGTGGGAGGATTGC...GCTTACTCTGTGGGAGACTTCGCTCTGTGATCTATGTGTAGACGTAGATCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCTTACAGAAGCTGAGCTaGCACAGAGCAGCACACACT +
Preference number: 4 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRLQKLS*HRAAHT
Trigger: AGTGTGTGCTGCTCTGTGTCAGCTCAGCTTCTGTAA...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GGGGGATTTCCACTGAATACACAAGCAAGCATGTCTCTACCCTGTCCCTCATTACACCTCTCCAAAGCCTaGAGCCCAGCAAACACCTCC +
Preference number: 4 (lower is better)
Translates to: GGFPLNTQASMSLPCPSLHLSKA*SPANTS
Trigger: GGAGGTGTTTGCTGGGCTTCAGGCTTTGGAGAGGTG...TAATGAGGGACAGGGTAGAGACATGCTTGCTTGTGTATTCAGTGGAAATCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GTGGGATCTACGTCTACACATAGATCACAGAGCGAAGTCTCCCACAGAGTAAGCTGGAGTGCAGTGGCATaGTCATGGGTCATTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VGSTSTHRSQSEVSHRVSWSAVA*SWVIAA
Trigger: GGCTGCAATGACCCATGATCATGCCACTGCACTCCA...GCTTACTCTGTGGGAGACTTCGCTCTGTGATCTATGTGTAGACGTAGATCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGGGGGTTTCACCATGTTaGCCAGGTTGGTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMGVSPC*PGWSPT
Trigger: AGTTGGAGACCAACCTGGGCAACATGGTGAAACCCC...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp CTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCTTGGGGTTTCACCATGTTaGCCAGGTTGGTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: LGFSLILRTSSGLFSLRLGVSPC*PGWSPT
Trigger: AGTTGGAGACCAACCTGGGCAACATGGTGAAACCCC...AAGGCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp GGGGGATTTCCACTGAATACACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATTCGAGACAGGCTTCTaGTCTGTGGCCCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GGFPLNTQASMSLPCPSLFETGF*SVAQAG
Trigger: TCCAGCCTGGGCCACAGAGCAGAAGCCTGTCTCGAA...TAATGAGGGACAGGGTAGAGACATGCTTGCTTGTGTATTCAGTGGAAATCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp GGGGGATTTCCACTGAATACACAAGCAAGCATGTCTCTACCCTGTCCCTCATTAAGGATCTCTCTGAGTTaGCCTGGCTGGGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: GGFPLNTQASMSLPCPSLRISLS*PGWGAV
Trigger: CACTGCACCCCAGCCAGGGCAACTCAGAGAGATCCT...TAATGAGGGACAGGGTAGAGACATGCTTGCTTGTGTATTCAGTGGAAATCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp CAGCACACACTGCTAGGACGTGGTGAGGAGACAGCAGGCTTGGGGGATTTCCACATTTTCACCAGTCCTTaGAGACACCTTTTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: QHTLLGRGEETAGLGDFHIFTSP*RHLFRQ
Trigger: TTGCCTGAAAAGGTGTCTCCAAGGACTGGTGAAAAT...GTGGAAATCCCCCAAGCCTGCTGTCTCCTCACCACGTCCTAGCAGTGTGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGGGGTTCAGTGCTGGCTaGCGATCCTGCAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMGFSAG*RSCSGP
Trigger: TGGACCGCTGCAGGATCGGCAGCCAGCACTGAACCC...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGATGATCATGGGTCATTaGAGCCTCAGCCTCCTAAGC +
Preference number: 4 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMMIMGH*SLSLLS
Trigger: GCTTAGGAGGCTGAGGCTGCAATGACCCATGATCAT...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp CTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCTTATGATCATGGGTCATTaGAGCCTCAGCCTCCTAAGC +
Preference number: 4 (lower is better)
Translates to: LGFSLILRTSSGLFSLRLMIMGH*SLSLLS
Trigger: GCTTAGGAGGCTGAGGCTGCAATGACCCATGATCAT...AAGGCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp CTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCTTAGGTCAGCAGTACTGTaGGAGAAGATGCCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: LGFSLILRTSSGLFSLRLRSAVL*EKMPKR
Trigger: CCTCTTAGGCATCTTCTCCCACAGTACTGCTGACCT...AAGGCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGAGGCACTGGATGCCCTaGGTTCAGTGCTGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMRHWMP*VQCWLP
Trigger: CGGCAGCCAGCACTGAACCCAGGGCATCCAGTGCCT...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGAGGAGACAGCAGGCTTaGGGGATTTCCACTGAATAC +
Preference number: 4 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMRRQQA*GISTEY
Trigger: GTATTCAGTGGAAATCCCCCAAGCCTGCTGTCTCCT...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGTTTCCCATGGGGAGGTaGAGAAGAAAACTGGACGAT +
Preference number: 4 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMFPMGR*RRKLDD
Trigger: ATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAA...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCAATCTTGCAGCCCCGTaGCTAAGGAAAGTTACTTCT +
Preference number: 4 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRNLAAP*LRKVTS
Trigger: AGAAGTAACTTTCCTTAGTCACGGGGCTGCAAGATT...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGGAAATTCTGTCACCATaGTCCAGTCTTCATTCCCCG +
Preference number: 4 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMEILSP*SSLHSP
Trigger: CGGGGAATGAAGACTGGAGCATGGTGACAGAATTTC...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp CTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCTTCACAGTGGAAAATCTTaGAGCCCCGTGACTAAGGAA +
Preference number: 4 (lower is better)
Translates to: LGFSLILRTSSGLFSLRLHSGKS*SPVTKE
Trigger: TTCCTTAGTCACGGGGCTGCAAGATTTTCCACTGTG...AAGGCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCAACCAGTCTTTCCCATaGGGAGGTGAAGAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRNQSFP*GGEEEN
Trigger: GTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTT...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp CAGCACACACTGCTAGGACGTGGTGAGGAGACAGCAGGCTTGGGGGATTTCCACAGTGATATCAGCAAGTaGTCACAGAATACACTAAGA +
Preference number: 4 (lower is better)
Translates to: QHTLLGRGEETAGLGDFHSDISK*SQNTLR
Trigger: TCTTAGTGTATTCTGTGACCACTTGCTGATATCACT...GTGGAAATCCCCCAAGCCTGCTGTCTCCTCACCACGTCCTAGCAGTGTGTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCAACTTACCACATTTCTaGGTGCTAGTGGCGTTCAGT +
Preference number: 4 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRNLPHF*VLVAFS
Trigger: ACTGAACGCCACTAGCACCCAGAAATGTGGTAAGTT...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCAACTCCCATGTCCCCTaGCAAGATTCTTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRNSHVP*QDSCFF
Trigger: AAAGAAGCAAGAATCTTGCCAGGGGACATGGGAGTT...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GGGGGATTTCCACTGAATACACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCATCTCAGCTGCGCTaGCAAACCAGTCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GGFPLNTQASMSLPCPSLSSQLR*QTSLSH
Trigger: ATGGGAAAGACTGGTTTGTCAGCGCAGCTGAGATGA...TAATGAGGGACAGGGTAGAGACATGCTTGCTTGTGTATTCAGTGGAAATCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp CTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCTTTGGGCATTACCTAAGTaGTATCAGCAAGTGGTCACA +
Preference number: 4 (lower is better)
Translates to: LGFSLILRTSSGLFSLRLWALPK*YQQVVT
Trigger: TGTGACCACTTGCTGATATCACTTAGGTAATGCCCA...AAGGCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GTGGGATCTACGTCTACACATAGATCACAGAGCGAAGTCTCCCACAGAGTAAGCAAGGTACTTACGGGTTaGAGGGTGCAAAATCCCAGA +
Preference number: 4 (lower is better)
Translates to: VGSTSTHRSQSEVSHRVSKVLTG*RVQNPR
Trigger: TCTGGGATTTTGCACCCTTCAACCCGTAAGTACCTT...GCTTACTCTGTGGGAGACTTCGCTCTGTGATCTATGTGTAGACGTAGATCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGTCCTTGTGCGGGAAATaGATTAAGGACATCAAGCCT +
Preference number: 4 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMSLCGK*IKDIKP
Trigger: AGGCTTGATGTCCTTAATTCATTTCCCGCACAAGGA...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp GTGGGATCTACGTCTACACATAGATCACAGAGCGAAGTCTCCCACAGAGTAAGCGAAATTCTGTCACCATaGTCCAGTCTTCATTCCCCG +
Preference number: 4 (lower is better)
Translates to: VGSTSTHRSQSEVSHRVSEILSP*SSLHSP
Trigger: CGGGGAATGAAGACTGGAGCATGGTGACAGAATTTC...GCTTACTCTGTGGGAGACTTCGCTCTGTGATCTATGTGTAGACGTAGATCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGAGGAATGAGCCACCATaGCTGGCTTCAAGCAATTTT +
Preference number: 4 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMRNEPP*LASSNF
Trigger: AAAATTGCTTGAAGCCAGGCATGGTGGCTCATTCCT...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCATCTCACAGAAGAAATaGTTCACCTTCCTCAAGCCA +
Preference number: 4 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRISQKK*FTFLKP
Trigger: TGGCTTGAGGAAGGTGAACCATTTCTTCTGTGAGAT...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp GTGGGATCTACGTCTACACATAGATCACAGAGCGAAGTCTCCCACAGAGTAAGCGACAGGTACAGAGCTTaGAAGGATGGATACAAGTCC +
Preference number: 4 (lower is better)
Translates to: VGSTSTHRSQSEVSHRVSDRYRA*KDGYKS
Trigger: GGACTTGTATCCATCCTTCCAAGCTCTGTACCTGTC...GCTTACTCTGTGGGAGACTTCGCTCTGTGATCTATGTGTAGACGTAGATCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp CTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCTTCATAAGAGGACCCTGTaGAACCTTTTTGTGACATGG +
Preference number: 4 (lower is better)
Translates to: LGFSLILRTSSGLFSLRLHKRTL*NLFVTW
Trigger: CCATGTCACAAAAAGGTTCCACAGGGTCCTCTTATG...AAGGCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR CAA 72 bp GAAGAAAACTGGACGATGAGGCAGGGACTTACCGATTaGAGCCCTAGCTTCCTCTCCTGTAAAATGGGCATA +
Preference number: 4 (lower is better)
Translates to: EENWTMRQGLTD*SPSFLSCKMGI
Trigger: TATGCCCATTTTACAGGAGAGGAAGCTAGGGCTCAAATCGGTAAGTCCCTGCCTCATCGTCCAGTTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGAGTTGGAGACTCACCTaGGCCCAGGAGATCAAGGCT +
Preference number: 4 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMSWRLT*AQEIKA
Trigger: AGCCTTGATCTCCTGGGCTCAGGTGAGTCTCCAACT...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGGGAAGGTGGATTGCTTaGGTCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMGRWIA*VQEFET
Trigger: GGTCTCGAACTCCTGGACTCAAGCAATCCACCTTCC...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GTGGGATCTACGTCTACACATAGATCACAGAGCGAAGTCTCCCACAGAGTAAGCTTGGGGGATTTCCACTaGATACACAAGCAAGCATGT +
Preference number: 4 (lower is better)
Translates to: VGSTSTHRSQSEVSHRVSLGDFH*IHKQAC
Trigger: ACATGCTTGCTTGTGTATTCAGTGGAAATCCCCCAA...GCTTACTCTGTGGGAGACTTCGCTCTGTGATCTATGTGTAGACGTAGATCCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GTGGGATCTACGTCTACACATAGATCACAGAGCGAAGTCTCCCACAGAGTAAGCAATCTTGCAGCCCCGTaGCTAAGGAAAGTTACTTCT +
Preference number: 4 (lower is better)
Translates to: VGSTSTHRSQSEVSHRVSNLAAP*LRKVTS
Trigger: AGAAGTAACTTTCCTTAGTCACGGGGCTGCAAGATT...GCTTACTCTGTGGGAGACTTCGCTCTGTGATCTATGTGTAGACGTAGATCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGTTACGGGTTGAAGGGTaGAAAATCCCAGAGAAATCT +
Preference number: 4 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMLRVEG*KIPEKS
Trigger: AGATTTCTCTGGGATTTTGCACCCTTCAACCCGTAA...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCATTACTACCACCATCTaGATCAAGCCATCGATTATC +
Preference number: 4 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRITTTI*IKPSII
Trigger: GATAATCGATGGCTTGATCCAGATGGTGGTAGTAAT...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp CTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCTTCAGAGCTTGGAAGGATaGATACAAGTCCTGCAAATA +
Preference number: 4 (lower is better)
Translates to: LGFSLILRTSSGLFSLRLQSLEG*IQVLQI
Trigger: TATTTGCAGGACTTGTATCCATCCTTCCAAGCTCTG...AAGGCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp GGGGGATTTCCACTGAATACACAAGCAAGCATGTCTCTACCCTGTCCCTCATTAGACAGGTACAGAGCTTaGAAGGATGGATACAAGTCC +
Preference number: 4 (lower is better)
Translates to: GGFPLNTQASMSLPCPSLDRYRA*KDGYKS
Trigger: GGACTTGTATCCATCCTTCCAAGCTCTGTACCTGTC...TAATGAGGGACAGGGTAGAGACATGCTTGCTTGTGTATTCAGTGGAAATCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTAACCACGGTAGGCCCTaGGTGCCACTTCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSNHGRP*VPLPST
Trigger: GGTGGAGGGAAGTGGCACCCAGGGCCTACCGTGGTT...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCAATCACCCAATAAAATaGACAGACAACTTGATGGGA +
Preference number: 4 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRNHPIK*TDNLMG
Trigger: TCCCATCAAGTTGTCTGTTCATTTTATTGGGTGATT...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp GGGGGATTTCCACTGAATACACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATTTGCTCATCTCAGCTaGGCTGACAAACCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: GGFPLNTQASMSLPCPSLFAHLS*ADKPVF
Trigger: AAAGACTGGTTTGTCAGCGCAGCTGAGATGAGCAAA...TAATGAGGGACAGGGTAGAGACATGCTTGCTTGTGTATTCAGTGGAAATCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTCTCGGTTGTTGCTCCTaGTCACCTGTGGGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSLGCCS*SPVGGS
Trigger: GGACCCACCCACAGGTGACCAGGAGCAACAACCGAG...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp GGGGGATTTCCACTGAATACACAAGCAAGCATGTCTCTACCCTGTCCCTCATTAAACTTACCACATTTCTaGGTGCTAGTGGCGTTCAGT +
Preference number: 4 (lower is better)
Translates to: GGFPLNTQASMSLPCPSLNLPHF*VLVAFS
Trigger: ACTGAACGCCACTAGCACCCAGAAATGTGGTAAGTT...TAATGAGGGACAGGGTAGAGACATGCTTGCTTGTGTATTCAGTGGAAATCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp GGGGGATTTCCACTGAATACACAAGCAAGCATGTCTCTACCCTGTCCCTCATTACTCCCCATTATCAGCTaGGATTATAGGAATGAGCCA +
Preference number: 4 (lower is better)
Translates to: GGFPLNTQASMSLPCPSLLPIIS*DYRNEP
Trigger: TGGCTCATTCCTATAATCCCAGCTGATAATGGGGAG...TAATGAGGGACAGGGTAGAGACATGCTTGCTTGTGTATTCAGTGGAAATCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGTTTAATACGTCTTTATaGAGTTTCCAGTGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMFNTSL*SFQCEE
Trigger: CTCCTCACACTGGAAACTTCATAAAGACGTATTAAA...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGTTTTCAAATAGCAGATaGAATTCTGTCACCATGCTC +
Preference number: 4 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMFSNSR*NSVTML
Trigger: GAGCATGGTGACAGAATTTCATCTGCTATTTGAAAA...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp GTGGGATCTACGTCTACACATAGATCACAGAGCGAAGTCTCCCACAGAGTAAGCATTACTACCACCATCTaGATCAAGCCATCGATTATC +
Preference number: 4 (lower is better)
Translates to: VGSTSTHRSQSEVSHRVSITTTI*IKPSII
Trigger: GATAATCGATGGCTTGATCCAGATGGTGGTAGTAAT...GCTTACTCTGTGGGAGACTTCGCTCTGTGATCTATGTGTAGACGTAGATCCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp GGGGGATTTCCACTGAATACACAAGCAAGCATGTCTCTACCCTGTCCCTCATTAATCTCACAGAAGAAATaGTTCACCTTCCTCAAGCCA +
Preference number: 4 (lower is better)
Translates to: GGFPLNTQASMSLPCPSLISQKK*FTFLKP
Trigger: TGGCTTGAGGAAGGTGAACCATTTCTTCTGTGAGAT...TAATGAGGGACAGGGTAGAGACATGCTTGCTTGTGTATTCAGTGGAAATCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGAGGAGACAGCAGGCTTaGGGGATTTCCACTGAATAC +
Preference number: 4 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMRRQQA*GISTEY
Trigger: GTATTCAGTGGAAATCCCCCAAGCCTGCTGTCTCCT...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTGCCTTTTTCCAGGCCTaGGCAGAGTGCATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSAFFQA*AECICS
Trigger: GCTGCAAATGCACTCTGCTCAGGCCTGGAAAAAGGC...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTAGTTGGAGACTCACCTaGGCCCAGGAGATCAAGGCT +
Preference number: 4 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSSWRLT*AQEIKA
Trigger: AGCCTTGATCTCCTGGGCTCAGGTGAGTCTCCAACT...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGTTTCCCATGGGGAGGTaGAGAAGAAAACTGGACGAT +
Preference number: 4 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMFPMGR*RRKLDD
Trigger: ATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAA...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GGGGGATTTCCACTGAATACACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATGTGGAACCTTTTTGTaGCATGGAACTTACCACATT +
Preference number: 4 (lower is better)
Translates to: GGFPLNTQASMSLPCPSLCGTFL*HGTYHI
Trigger: AATGTGGTAAGTTCCATGTCACAAAAAGGTTCCACA...TAATGAGGGACAGGGTAGAGACATGCTTGCTTGTGTATTCAGTGGAAATCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGCCAATGTCTTATTTCTaGACAGTGCTGATTTACAAT +
Preference number: 4 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMPMSYF*TVLIYN
Trigger: ATTGTAAATCAGCACTGTGCAGAAATAAGACATTGG...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp CTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCTTCCAATGTCTTATTTCTaGACAGTGCTGATTTACAAT +
Preference number: 4 (lower is better)
Translates to: LGFSLILRTSSGLFSLRLPMSYF*TVLIYN
Trigger: ATTGTAAATCAGCACTGTGCAGAAATAAGACATTGG...AAGGCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTGTGATCCTCCCACCTTaGCCTCCCCATTATCAGCTG +
Preference number: 4 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSVILPP*PPHYQL
Trigger: CAGCTGATAATGGGGAGGCCAAGGTGGGAGGATCAC...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GGGGGATTTCCACTGAATACACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATTTTCAAATAGCAGATaGAATTCTGTCACCATGCTC +
Preference number: 4 (lower is better)
Translates to: GGFPLNTQASMSLPCPSLFSNSR*NSVTML
Trigger: GAGCATGGTGACAGAATTTCATCTGCTATTTGAAAA...TAATGAGGGACAGGGTAGAGACATGCTTGCTTGTGTATTCAGTGGAAATCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGAGGAATGAGCCACCATaGCTGGCTTCAAGCAATTTT +
Preference number: 4 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMRNEPP*LASSNF
Trigger: AAAATTGCTTGAAGCCAGGCATGGTGGCTCATTCCT...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp GGGGGATTTCCACTGAATACACAAGCAAGCATGTCTCTACCCTGTCCCTCATTAAGTGATATCAGCAAGTaGTCACAGAATACACTAAGA +
Preference number: 4 (lower is better)
Translates to: GGFPLNTQASMSLPCPSLSDISK*SQNTLR
Trigger: TCTTAGTGTATTCTGTGACCACTTGCTGATATCACT...TAATGAGGGACAGGGTAGAGACATGCTTGCTTGTGTATTCAGTGGAAATCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGCATAAGAGGACCCTGTaGAACCTTTTTGTGACATGG +
Preference number: 4 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMHKRTL*NLFVTW
Trigger: CCATGTCACAAAAAGGTTCCACAGGGTCCTCTTATG...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR CAA 72 bp TTCCAGTCTAGGGGTTCAGTGGCTATAGATAAAGAGTaGTGGTTGAAACACTCAAGGTACTTACGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: FQSRGSVAIDKE*WLKHSRYLRVE
Trigger: TTCAACCCGTAAGTACCTTGAGTGTTTCAACCACAACTCTTTATCTATAGCCACTGAACCCCTAGACTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTTTACAGAAGCTGAGCTaGCACAGAGCAGCACACACT +
Preference number: 4 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSLQKLS*HRAAHT
Trigger: AGTGTGTGCTGCTCTGTGTCAGCTCAGCTTCTGTAA...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTTCATCTCAGCTGCGCTaGCAAACCAGTCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSSSQLR*QTSLSH
Trigger: ATGGGAAAGACTGGTTTGTCAGCGCAGCTGAGATGA...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTAGGTCAGCAGTACTGTaGGAGAAGATGCCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSRSAVL*EKMPKR
Trigger: CCTCTTAGGCATCTTCTCCCACAGTACTGCTGACCT...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTAAGGTACTTACGGGTTaGAGGGTGCAAAATCCCAGA +
Preference number: 4 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSKVLTG*RVQNPR
Trigger: TCTGGGATTTTGCACCCTTCAACCCGTAAGTACCTT...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTCACAGTGGAAAATCTTaGAGCCCCGTGACTAAGGAA +
Preference number: 4 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSHSGKS*SPVTKE
Trigger: TTCCTTAGTCACGGGGCTGCAAGATTTTCCACTGTG...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTGATCCATCTACACAGTaGAAAATCTTGCAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSDPSTQ*KILQPR
Trigger: ACGGGGCTGCAAGATTTTCCACTGTGTAGATGGATC...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGTTTAATACGTCTTTATaGAGTTTCCAGTGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMFNTSL*SFQCEE
Trigger: CTCCTCACACTGGAAACTTCATAAAGACGTATTAAA...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGATAAAGAGTTGTGGTTaGAACACTCAAGGTACTTAC +
Preference number: 4 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMIKSCG*NTQGTY
Trigger: GTAAGTACCTTGAGTGTTTCAACCACAACTCTTTAT...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTTCCTTGTGCGGGAAATaGATTAAGGACATCAAGCCT +
Preference number: 4 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSSLCGK*IKDIKP
Trigger: AGGCTTGATGTCCTTAATTCATTTCCCGCACAAGGA...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTTTTGCTCATCTCAGCTaGGCTGACAAACCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSFAHLS*ADKPVF
Trigger: AAAGACTGGTTTGTCAGCGCAGCTGAGATGAGCAAA...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
3UTR CAA 72 bp AAGAGAATTTTACTGCAAATAGGACAGGTACAGAGCTaGGAAGGATGGATACAAGTCCTGCAAATAGTTCAC +
Preference number: 4 (lower is better)
Translates to: KRILLQIGQVQS*EGWIQVLQIVH
Trigger: GTGAACTATTTGCAGGACTTGTATCCATCCTTCCAAGCTCTGTACCTGTCCTATTTGCAGTAAAATTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR GCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTTTACGGGTTGAAGGGTaGAAAATCCCAGAGAAATCT +
Preference number: 4 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSLRVEG*KIPEKS
Trigger: AGATTTCTCTGGGATTTTGCACCCTTCAACCCGTAA...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTCAGAGCTTGGAAGGATaGATACAAGTCCTGCAAATA +
Preference number: 4 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSQSLEG*IQVLQI
Trigger: TATTTGCAGGACTTGTATCCATCCTTCCAAGCTCTG...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR TCA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTTGTGGAACCTTTTTGTaGCATGGAACTTACCACATT +
Preference number: 4 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSCGTFL*HGTYHI
Trigger: AATGTGGTAAGTTCCATGTCACAAAAAGGTTCCACA...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp GTGGGATCTACGTCTACACATAGATCACAGAGCGAAGTCTCCCACAGAGTAAGCTCCATGGCTCGGTTGTaGCTCCTGGTCACCTGTGGG +
Preference number: 5 (lower is better)
Translates to: VGSTSTHRSQSEVSHRVSSMARL*LLVTCG
Trigger: CCCACAGGTGACCAGGAGCAACAACCGAGCCATGGA...GCTTACTCTGTGGGAGACTTCGCTCTGTGATCTATGTGTAGACGTAGATCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGGTCTCCATGGCTCGGTaGTTGCTCCTGGTCACCTGT +
Preference number: 5 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMVSMAR*LLLVTC
Trigger: ACAGGTGACCAGGAGCAACAACCGAGCCATGGAGAC...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp CTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCTTGAGCCTCCTCCGAAGTaGTTTGCTCATCTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LGFSLILRTSSGLFSLRLEPPPK*FAHLSC
Trigger: GCAGCTGAGATGAGCAAACAACTTCGGAGGAGGCTC...AAGGCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp CAGCACACACTGCTAGGACGTGGTGAGGAGACAGCAGGCTTGGGGGATTTCCACTATTTTCACCAGTCCTaGGAGACACCTTTTCAGGCA +
Preference number: 5 (lower is better)
Translates to: QHTLLGRGEETAGLGDFHYFHQS*ETPFQA
Trigger: TGCCTGAAAAGGTGTCTCCAAGGACTGGTGAAAATA...GTGGAAATCCCCCAAGCCTGCTGTCTCCTCACCACGTCCTAGCAGTGTGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp CTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCTTTGGGGTTTCACCATGTaGCCCAGGTTGGTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: LGFSLILRTSSGLFSLRLWGFTM*PRLVSN
Trigger: GTTGGAGACCAACCTGGGCAACATGGTGAAACCCCA...AAGGCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp GTGGGATCTACGTCTACACATAGATCACAGAGCGAAGTCTCCCACAGAGTAAGCCTCCTCCGAAGTTGTTaGCTCATCTCAGCTGCGCTG +
Preference number: 5 (lower is better)
Translates to: VGSTSTHRSQSEVSHRVSLLRSC*LISAAL
Trigger: CAGCGCAGCTGAGATGAGCAAACAACTTCGGAGGAG...GCTTACTCTGTGGGAGACTTCGCTCTGTGATCTATGTGTAGACGTAGATCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp CAGCACACACTGCTAGGACGTGGTGAGGAGACAGCAGGCTTGGGGGATTTCCACTCTCTAAGTTTGCAGTaGCTCACACTGAGACTAGTT +
Preference number: 5 (lower is better)
Translates to: QHTLLGRGEETAGLGDFHSLSLQ*LTLRLV
Trigger: AACTAGTCTCAGTGTGAGCAACTGCAAACTTAGAGA...GTGGAAATCCCCCAAGCCTGCTGTCTCCTCACCACGTCCTAGCAGTGTGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp CAGCACACACTGCTAGGACGTGGTGAGGAGACAGCAGGCTTGGGGGATTTCCACTACACATCTCTAAGTTaGCAGTTGCTCACACTGAGA +
Preference number: 5 (lower is better)
Translates to: QHTLLGRGEETAGLGDFHYTSLS*QLLTLR
Trigger: TCTCAGTGTGAGCAACTGCAAACTTAGAGATGTGTA...GTGGAAATCCCCCAAGCCTGCTGTCTCCTCACCACGTCCTAGCAGTGTGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp GGGGGATTTCCACTGAATACACAAGCAAGCATGTCTCTACCCTGTCCCTCATTAAGCAATCCTCCCACCTaGGCCTTGGCCTCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: GGFPLNTQASMSLPCPSLSNPPT*ALASQS
Trigger: ACTTTGGGAGGCCAAGGCCAAGGTGGGAGGATTGCT...TAATGAGGGACAGGGTAGAGACATGCTTGCTTGTGTATTCAGTGGAAATCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp GGGGGATTTCCACTGAATACACAAGCAAGCATGTCTCTACCCTGTCCCTCATTACTCCTCCGAAGTTGTTaGCTCATCTCAGCTGCGCTG +
Preference number: 5 (lower is better)
Translates to: GGFPLNTQASMSLPCPSLLLRSC*LISAAL
Trigger: CAGCGCAGCTGAGATGAGCAAACAACTTCGGAGGAG...TAATGAGGGACAGGGTAGAGACATGCTTGCTTGTGTATTCAGTGGAAATCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGCAAGGTACTTACGGGTaGAAGGGTGCAAAATCCCAG +
Preference number: 5 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMQGTYG*KGAKSQ
Trigger: CTGGGATTTTGCACCCTTCAACCCGTAAGTACCTTG...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp GGGGGATTTCCACTGAATACACAAGCAAGCATGTCTCTACCCTGTCCCTCATTAAGTGATCCTCCCACCTaGGCCTCCCCATTATCAGCT +
Preference number: 5 (lower is better)
Translates to: GGFPLNTQASMSLPCPSLSDPPT*ASPLSA
Trigger: AGCTGATAATGGGGAGGCCAAGGTGGGAGGATCACT...TAATGAGGGACAGGGTAGAGACATGCTTGCTTGTGTATTCAGTGGAAATCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGTCCATGGCTCGGTTGTaGCTCCTGGTCACCTGTGGG +
Preference number: 5 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMSMARL*LLVTCG
Trigger: CCCACAGGTGACCAGGAGCAACAACCGAGCCATGGA...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp CTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCCTTTTTAAGACCCTAGGGTaGGGCTACAACTGTTGTGAG +
Preference number: 5 (lower is better)
Translates to: LGFSLILRTSSGLFSLRLFKTLG*GYNCCE
Trigger: CTCACAACAGTTGTAGCCCAACCCTAGGGTCTTAAA...AAGGCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCTATTTTCACCAGTCCTaGGAGACACCTTTTCAGGCA +
Preference number: 5 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRYFHQS*ETPFQA
Trigger: TGCCTGAAAAGGTGTCTCCAAGGACTGGTGAAAATA...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGGTCTCCATGGCTCGGTaGTTGCTCCTGGTCACCTGT +
Preference number: 5 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMVSMAR*LLLVTC
Trigger: ACAGGTGACCAGGAGCAACAACCGAGCCATGGAGAC...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGGAGCCTCCTCCGAAGTaGTTTGCTCATCTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMEPPPK*FAHLSC
Trigger: GCAGCTGAGATGAGCAAACAACTTCGGAGGAGGCTC...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGTGGGGTTTCACCATGTaGCCCAGGTTGGTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMWGFTM*PRLVSN
Trigger: GTTGGAGACCAACCTGGGCAACATGGTGAAACCCCA...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCGATTGCAATGAAGATTaGTCACATCTATGCCCCAAA +
Preference number: 5 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRDCNED*SHLCPK
Trigger: TTTGGGGCATAGATGTGACAAATCTTCATTGCAATC...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGAGTGATCCTCCCACCTaGGCCTCCCCATTATCAGCT +
Preference number: 5 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMSDPPT*ASPLSA
Trigger: AGCTGATAATGGGGAGGCCAAGGTGGGAGGATCACT...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGCTGGAAGAGAAGAATTaGGGGCAAATAGAAATGTGT +
Preference number: 5 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMLEEKN*GQIEMC
Trigger: ACACATTTCTATTTGCCCCAAATTCTTCTCTTCCAG...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp TCCCTGGGGTTTAGTCTAATCCTCAGGACCAGTTCTGGCCTCTTTTCTCTCCGCGATAAAGAGTTGTGGTaGAAACACTCAAGGTACTTA +
Preference number: 5 (lower is better)
Translates to: SLGFSLILRTSSGLFSLRDKELW*KHSRYL
Trigger: TAAGTACCTTGAGTGTTTCAACCACAACTCTTTATC...GCGGAGAGAAAAGAGGCCAGAACTGGTCCTGAGGATTAGACTAAACCCCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGGCTATAGATAAAGAGTaGTGGTTGAAACACTCAAGG +
Preference number: 5 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMAIDKE*WLKHSR
Trigger: CCTTGAGTGTTTCAACCACAACTCTTTATCTATAGC...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp GCGCTGACAAACCAGTCTTTCCCATGGGGAGGTGAAGAAGAAAACTGGACGATGGATTGCAATGAAGATTaGTCACATCTATGCCCCAAA +
Preference number: 5 (lower is better)
Translates to: ALTNQSFPWGGEEENWTMDCNED*SHLCPK
Trigger: TTTGGGGCATAGATGTGACAAATCTTCATTGCAATC...CATCGTCCAGTTTTCTTCTTCACCTCCCCATGGGAAAGACTGGTTTGTCAGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGGGACAGGTACAGAGCTaGGAAGGATGGATACAAGTC +
Preference number: 5 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMGQVQS*EGWIQV
Trigger: GACTTGTATCCATCCTTCCAAGCTCTGTACCTGTCC...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp GTGGGATCTACGTCTACACATAGATCACAGAGCGAAGTCTCCCACAGAGTAAGCCTGGAAGAGAAGAATTaGGGGCAAATAGAAATGTGT +
Preference number: 5 (lower is better)
Translates to: VGSTSTHRSQSEVSHRVSLEEKN*GQIEMC
Trigger: ACACATTTCTATTTGCCCCAAATTCTTCTCTTCCAG...GCTTACTCTGTGGGAGACTTCGCTCTGTGATCTATGTGTAGACGTAGATCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGCAAGGTACTTACGGGTaGAAGGGTGCAAAATCCCAG +
Preference number: 5 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMQGTYG*KGAKSQ
Trigger: CTGGGATTTTGCACCCTTCAACCCGTAAGTACCTTG...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTAGCAATCCTCCCACCTaGGCCTTGGCCTCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSSNPPT*ALASQS
Trigger: ACTTTGGGAGGCCAAGGCCAAGGTGGGAGGATTGCT...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGTTTAAGACCCTAGGGTaGGGCTACAACTGTTGTGAG +
Preference number: 5 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMFKTLG*GYNCCE
Trigger: CTCACAACAGTTGTAGCCCAACCCTAGGGTCTTAAA...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGCCCCTGGCAAGATTCTaGCTTCTTTTACTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMPLARF*LLLLSC
Trigger: ACAGGAGAGTAAAAGAAGCAAGAATCTTGCCAGGGG...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp GATAAGGTAAAGGCTGGTGAAACTTTTGCTTGGGTGATTATGATCCAAAATTCTTGGAAGGTGGATTGCTaGAGTCCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: DKVKAGETFAWVIMIQNSWKVDC*SPGVRD
Trigger: GTCTCGAACTCCTGGACTCAAGCAATCCACCTTCCA...AGAATTTTGGATCATAATCACCCAAGCAAAAGTTTCACCAGCCTTTACCTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp GGGGGATTTCCACTGAATACACAAGCAAGCATGTCTCTACCCTGTCCCTCATTAGATAAAGAGTTGTGGTaGAAACACTCAAGGTACTTA +
Preference number: 5 (lower is better)
Translates to: GGFPLNTQASMSLPCPSLDKELW*KHSRYL
Trigger: TAAGTACCTTGAGTGTTTCAACCACAACTCTTTATC...TAATGAGGGACAGGGTAGAGACATGCTTGCTTGTGTATTCAGTGGAAATCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGTCTCTAAGTTTGCAGTaGCTCACACTGAGACTAGTT +
Preference number: 5 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMSLSLQ*LTLRLV
Trigger: AACTAGTCTCAGTGTGAGCAACTGCAAACTTAGAGA...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGTACACATCTCTAAGTTaGCAGTTGCTCACACTGAGA +
Preference number: 5 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMYTSLS*QLLTLR
Trigger: TCTCAGTGTGAGCAACTGCAAACTTAGAGATGTGTA...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS-3UTR CAA 90 bp ACAAGCAAGCATGTCTCTACCCTGTCCCTCATTATCTCAAAGACAACTTGTATGGCTATAGATAAAGAGTaGTGGTTGAAACACTCAAGG +
Preference number: 5 (lower is better)
Translates to: TSKHVSTLSLIISKTTCMAIDKE*WLKHSR
Trigger: CCTTGAGTGTTTCAACCACAACTCTTTATCTATAGC...CATACAAGTTGTCTTTGAGATAATGAGGGACAGGGTAGAGACATGCTTGCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1
CDS CCA 72 bp GGCAGAGCCAGGCACTGGATGCCCTGGGTTCAGTGCTaGCTGCCGATCCTGCAGCGGTCCAGCCCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: GRARHWMPWVQC*LPILQRSSPFL
Trigger: GAGGAAGGGGCTGGACCGCTGCAGGATCGGCAGCCAGCACTGAACCCAGGGCATCCAGTGCCTGGCTCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641492.1
ENST00000641791.1