RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR2V1 (Homo sapiens)

Ensembl gene IDs: ENSG00000185372

Ensembl transcript IDs: ENST00000641318.1, ENST00000641367.1, ENST00000641551.1, ENST00000642036.1

Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTGAGACAGATATCAGTTAATTTAGAAAGTTTATTTTGTCAAGGTTaGGGACGTGCACCCGTGACGCGGCCCTCCGGAGGTCCTGACGAC +
Preference number: 1 (lower is better)
Translates to: LRQISVNLESLFCQG*GRAPVTRPSGGPDD
Trigger: GTCGTCAGGACCTCCGGAGGGCCGCGTCACGGGTGCACGTCCTCAACCTTGACAAAATAAACTTTCTAAATTAACTGATATCTGTCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR TCA 90 bp GCTTCCAGGTCACAGGTAGGTGAGAGACAAATGGTTGCAGTCTTTTaGGTTTCCGATGAGACATTCCAAAGGAGTCAATCAGAAGCTGCA +
Preference number: 1 (lower is better)
Translates to: ASRSQVGERQMVAVF*VSDETFQRSQSEAA
Trigger: TGCAGCTTCTGATTGACTCCTTTGGAATGTCTCATCGGAAACTCAAAAGACTGCAACCATTTGTCTCTCACCTACCTGTGACCTGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR TCA 90 bp CCTCACTTGATGCTCTCTTCTTGCATTCATTCAATAATGTTTTATTaGGCAACTGCTACTTATAAGGCACAGGGTCTGGTACTGGTAATA +
Preference number: 1 (lower is better)
Translates to: PHLMLSSCIHSIMFY*ATATYKAQGLVLVI
Trigger: TATTACCAGTACCAGACCCTGTGCCTTATAAGTAGCAGTTGCTCAATAAAACATTATTGAATGAATGCAAGAAGAGAGCATCAAGTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR TCA 90 bp GAGACATTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGGAGGCAGGTTTGCCCTaGGCAGTTCCCACCTTGACT +
Preference number: 2 (lower is better)
Translates to: ETFQRSQSEAASISVSRGEAGLP*AVPTLT
Trigger: AGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTC...CCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAATGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR TCA 90 bp TTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTGAGGCAGGTTTGCCCTaGGCAGTTCCCACCTTGACT +
Preference number: 2 (lower is better)
Translates to: FQRSQSEAASISVSRGLTEAGLP*AVPTLT
Trigger: AGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTC...AGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR TCA 90 bp GAGACATTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGGAGCAGTTCCCACCTTaGCTTTTCCCTTTATCCTCG +
Preference number: 2 (lower is better)
Translates to: ETFQRSQSEAASISVSRGEQFPP*LFPLSS
Trigger: CGAGGATAAAGGGAAAAGTCAAGGTGGGAACTGCTC...CCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAATGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR CCA 90 bp GAGGTCCTGACGACACGTGCCCAAGGTGGTCAGGGCACGCTTGGTTTTATACATCCATCAACAGGTGAATaGAAACAGACACTCACAAAG +
Preference number: 2 (lower is better)
Translates to: EVLTTRAQGGQGTLGFIHPSTGE*KQTLTK
Trigger: CTTTGTGAGTGTCTGTTTCCATTCACCTGTTGATGG...ATGTATAAAACCAAGCGTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR CCA 90 bp GAGGTCCTGACGACACGTGCCCAAGGTGGTCAGGGCACGCTTGGTTTTATACATGCCGTTGCTTCTTCATaGAGCTTTAGATTGACACAT +
Preference number: 2 (lower is better)
Translates to: EVLTTRAQGGQGTLGFIHAVASS*SFRLTH
Trigger: ATGTGTCAATCTAAAGCTCCATGAAGAAGCAACGGC...ATGTATAAAACCAAGCGTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR TCA 90 bp GACTTTGAAAGAATGGGAGGCAGGTTTGCCCTGAGCAGTTCCCACCTTGACTTTCTCACAAAGGTTGAGTaGCTTCCCAATGTGACACAG +
Preference number: 2 (lower is better)
Translates to: DFERMGGRFALSSSHLDFLTKVE*LPNVTQ
Trigger: CTGTGTCACATTGGGAAGTCACTCAACCTTTGTGAG...AAAGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATTCTTTCAAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR TCA 90 bp TTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTCTCACAAAGGTTGAGTaGCTTCCCAATGTGACACAG +
Preference number: 2 (lower is better)
Translates to: FQRSQSEAASISVSRGLTLTKVE*LPNVTQ
Trigger: CTGTGTCACATTGGGAAGTCACTCAACCTTTGTGAG...AGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR TCA 90 bp GAGACATTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTCACAAAGGTTGAGTaGCTTCCCAATGTGACACAG +
Preference number: 2 (lower is better)
Translates to: ETFQRSQSEAASISVSRGLTKVE*LPNVTQ
Trigger: CTGTGTCACATTGGGAAGTCACTCAACCTTTGTGAG...CCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAATGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR TCA 90 bp GACTTTGAAAGAATGGGAGGCAGGTTTGCCCTGAGCAGTTCCCACCTTGACTTTGACACTCACAAAGGTTaGGTGACTTCCCAATGTGAC +
Preference number: 2 (lower is better)
Translates to: DFERMGGRFALSSSHLDFDTHKG*VTSQCD
Trigger: GTCACATTGGGAAGTCACTCAACCTTTGTGAGTGTC...AAAGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATTCTTTCAAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR TCA 90 bp GAGACATTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGATGACCATCAACAGGTaGATGGAAACAGACACTCAC +
Preference number: 2 (lower is better)
Translates to: ETFQRSQSEAASISVSRGMTINR*METDTH
Trigger: GTGAGTGTCTGTTTCCATTCACCTGTTGATGGTCAT...CCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAATGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR TCA 90 bp AGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTTTGAAAATGACCATCAACAGGTaGATGGAAACAGACACTCAC +
Preference number: 2 (lower is better)
Translates to: RSQSEAASISVSRGLTLKMTINR*METDTH
Trigger: GTGAGTGTCTGTTTCCATTCACCTGTTGATGGTCAT...TTTCAAAGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR CCA 90 bp GAGACATTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCCATCAACAGGTGAATaGAAACAGACACTCACAAAG +
Preference number: 2 (lower is better)
Translates to: ETFQRSQSEAASISVSRGPSTGE*KQTLTK
Trigger: CTTTGTGAGTGTCTGTTTCCATTCACCTGTTGATGG...CCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAATGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR CCA 90 bp GAGACATTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGGCCGTTGCTTCTTCATaGAGCTTTAGATTGACACAT +
Preference number: 2 (lower is better)
Translates to: ETFQRSQSEAASISVSRGAVASS*SFRLTH
Trigger: ATGTGTCAATCTAAAGCTCCATGAAGAAGCAACGGC...CCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAATGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR TCA 90 bp TTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTCATGGAGCTTTAGATTaGCACATTGTGATCTTTACA +
Preference number: 2 (lower is better)
Translates to: FQRSQSEAASISVSRGLTHGALD*HIVIFT
Trigger: TGTAAAGATCACAATGTGTCAATCTAAAGCTCCATG...AGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR TCA 90 bp CAATCAACAATGACAATAATAGCAGCCGTTGCTTCTTCATGGAGCTTTAGATTGGACACTCACAAAGGTTaGGTGACTTCCCAATGTGAC +
Preference number: 2 (lower is better)
Translates to: QSTMTIIAAVASSWSFRLDTHKG*VTSQCD
Trigger: GTCACATTGGGAAGTCACTCAACCTTTGTGAGTGTC...CAATCTAAAGCTCCATGAAGAAGCAACGGCTGCTATTATTGTCATTGTTGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR CAA 90 bp ACAATGACAATAATAGCAGCCGTTGCTTCTTCATGGAGCTTTAGATaGACACATTGTGATCTTTACAAAATCCCTCAGAGCACGAGTGTC +
Preference number: 2 (lower is better)
Translates to: TMTIIAAVASSWSFR*THCDLYKIPQSTSV
Trigger: GACACTCGTGCTCTGAGGGATTTTGTAAAGATCACAATGTGTCAATCTAAAGCTCCATGAAGAAGCAACGGCTGCTATTATTGTCATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR TCA 90 bp GAAAAAGGCAAAGAACTGTCCAAAAAGAGTTATAGGGACTCAATTTCTGCCATTATGACCATCAACAGGTaGATGGAAACAGACACTCAC +
Preference number: 2 (lower is better)
Translates to: EKGKELSKKSYRDSISAIMTINR*METDTH
Trigger: GTGAGTGTCTGTTTCCATTCACCTGTTGATGGTCAT...AATGGCAGAAATTGAGTCCCTATAACTCTTTTTGGACAGTTCTTTGCCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR CCA 90 bp CAATCAACAATGACAATAATAGCAGCCGTTGCTTCTTCATGGAGCTTTAGATTGCCATCAACAGGTGAATaGAAACAGACACTCACAAAG +
Preference number: 2 (lower is better)
Translates to: QSTMTIIAAVASSWSFRLPSTGE*KQTLTK
Trigger: CTTTGTGAGTGTCTGTTTCCATTCACCTGTTGATGG...CAATCTAAAGCTCCATGAAGAAGCAACGGCTGCTATTATTGTCATTGTTGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR TCA 90 bp GAAAAAGGCAAAGAACTGTCCAAAAAGAGTTATAGGGACTCAATTTCTGCCATTCATGGAGCTTTAGATTaGCACATTGTGATCTTTACA +
Preference number: 2 (lower is better)
Translates to: EKGKELSKKSYRDSISAIHGALD*HIVIFT
Trigger: TGTAAAGATCACAATGTGTCAATCTAAAGCTCCATG...AATGGCAGAAATTGAGTCCCTATAACTCTTTTTGGACAGTTCTTTGCCTTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR TCA 72 bp AGGACGTGCACCCGTGACGCGGCCCTCCGGAGGTCCTaGCGACACGTGCCCAAGGTGGTCAGGGCACGCTTG +
Preference number: 3 (lower is better)
Translates to: RTCTRDAALRRS*RHVPKVVRARL
Trigger: CAAGCGTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACCTCCGGAGGGCCGCGTCACGGGTGCACGTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR GCA 72 bp CCCGTGACGCGGCCCTCCGGAGGTCCTGACGACACGTaGCCAAGGTGGTCAGGGCACGCTTGGTTTTATACA +
Preference number: 3 (lower is better)
Translates to: PVTRPSGGPDDT*PRWSGHAWFYT
Trigger: TGTATAAAACCAAGCGTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACCTCCGGAGGGCCGCGTCACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR CAA 90 bp GAGGTCCTGACGACACGTGCCCAAGGTGGTCAGGGCACGCTTGGTTTTATACATAGCAGAGGGCTGACTTaGAAAGAATGGGAGGCAGGT +
Preference number: 3 (lower is better)
Translates to: EVLTTRAQGGQGTLGFIHSRGLT*KEWEAG
Trigger: ACCTGCCTCCCATTCTTTCAAAGTCAGCCCTCTGCT...ATGTATAAAACCAAGCGTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR TCA 72 bp AACAGACACTCACAAAGGTTGAGTGACTTCCCAATGTaGCACAGGCAAGAAGGGGCACAGCAGGCACCAGAC +
Preference number: 3 (lower is better)
Translates to: NRHSQRLSDFPM*HRQEGAQQAPD
Trigger: GTCTGGTGCCTGCTGTGCCCCTTCTTGCCTGTGTCACATTGGGAAGTCACTCAACCTTTGTGAGTGTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR CAA 90 bp GAGGTCCTGACGACACGTGCCCAAGGTGGTCAGGGCACGCTTGGTTTTATACATGTGAGAGACAAATGGTaGCAGTCTTTTGAGTTTCCG +
Preference number: 3 (lower is better)
Translates to: EVLTTRAQGGQGTLGFIHVRDKW*QSFEFP
Trigger: CGGAAACTCAAAAGACTGCAACCATTTGTCTCTCAC...ATGTATAAAACCAAGCGTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR CAA 90 bp GAGACATTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGTTTATCCTCGTGATTTaGGGGGCCCAAGATATCCTC +
Preference number: 3 (lower is better)
Translates to: ETFQRSQSEAASISVSRGFILVI*GAQDIL
Trigger: GAGGATATCTTGGGCCCCCAAAATCACGAGGATAAA...CCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAATGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR TCA 72 bp ACAGGTGAATGGAAACAGACACTCACAAAGGTTGAGTaGCTTCCCAATGTGACACAGGCAAGAAGGGGCACA +
Preference number: 3 (lower is better)
Translates to: TGEWKQTLTKVE*LPNVTQARRGT
Trigger: TGTGCCCCTTCTTGCCTGTGTCACATTGGGAAGTCACTCAACCTTTGTGAGTGTCTGTTTCCATTCACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR-3UTR CAA 90 bp AGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTTTGAAATTTATCCTCGTGATTTaGGGGGCCCAAGATATCCTC +
Preference number: 3 (lower is better)
Translates to: RSQSEAASISVSRGLTLKFILVI*GAQDIL
Trigger: GAGGATATCTTGGGCCCCCAAAATCACGAGGATAAA...TTTCAAAGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
3UTR TCA 72 bp TCACAGGTAGGTGAGAGACAAATGGTTGCAGTCTTTTaGGTTTCCGATGAGACATTCCAAAGGAGTCAATCA +
Preference number: 3 (lower is better)
Translates to: SQVGERQMVAVF*VSDETFQRSQS
Trigger: TGATTGACTCCTTTGGAATGTCTCATCGGAAACTCAAAAGACTGCAACCATTTGTCTCTCACCTACCTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR GCA 90 bp GAGGTCCTGACGACACGTGCCCAAGGTGGTCAGGGCACGCTTGGTTTTATACATGGTCCTGACGACACGTaGCCAAGGTGGTCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: EVLTTRAQGGQGTLGFIHGPDDT*PRWSGH
Trigger: GTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACC...ATGTATAAAACCAAGCGTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp GAGGTCCTGACGACACGTGCCCAAGGTGGTCAGGGCACGCTTGGTTTTATACATGCAGGCACCAGACTCTaGGGTTCAGTGCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: EVLTTRAQGGQGTLGFIHAGTRL*GSVLAA
Trigger: GGCAGCCAGCACTGAACCCCAGAGTCTGGTGCCTGC...ATGTATAAAACCAAGCGTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp GAGGTCCTGACGACACGTGCCCAAGGTGGTCAGGGCACGCTTGGTTTTATACATGAGGCAGGTTTGCCCTaGGCAGTTCCCACCTTGACT +
Preference number: 4 (lower is better)
Translates to: EVLTTRAQGGQGTLGFIHEAGLP*AVPTLT
Trigger: AGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTC...ATGTATAAAACCAAGCGTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR GCA 90 bp GAGACATTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGGCTGGCTGCCAATCCTaGAGCGGTCCAGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: ETFQRSQSEAASISVSRGAGCQS*SGPAPS
Trigger: GGAAGGGGCTGGACCGCTGCAGGATTGGCAGCCAGC...CCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAATGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR GCA 90 bp GAGGTCCTGACGACACGTGCCCAAGGTGGTCAGGGCACGCTTGGTTTTATACATGACTCTGGGGTTCAGTaGTGGCTGCCAATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: EVLTTRAQGGQGTLGFIHDSGVQ*WLPILQ
Trigger: CTGCAGGATTGGCAGCCAGCACTGAACCCCAGAGTC...ATGTATAAAACCAAGCGTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp GAGACATTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGGAGTCGGGTGGAGCCTaGGGGCCTGGTTGGGATCCT +
Preference number: 4 (lower is better)
Translates to: ETFQRSQSEAASISVSRGESGGA*GPGWDP
Trigger: AGGATCCCAACCAGGCCCCCAGGCTCCACCCGACTC...CCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAATGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641551.1
CDS-3UTR GCA 90 bp GAGGTCCTGACGACACGTGCCCAAGGTGGTCAGGGCACGCTTGGTTTTATACATAATGGGAGGCAGGTTTaGCCTGAGCAGTTCCCACCT +
Preference number: 4 (lower is better)
Translates to: EVLTTRAQGGQGTLGFIHNGRQV*PEQFPP
Trigger: AGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATT...ATGTATAAAACCAAGCGTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR GCA 90 bp TTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTGGTCCTGACGACACGTaGCCAAGGTGGTCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: FQRSQSEAASISVSRGLTGPDDT*PRWSGH
Trigger: GTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACC...AGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp GACTTTGAAAGAATGGGAGGCAGGTTTGCCCTGAGCAGTTCCCACCTTGACTTTGGGTCAGTGTCTTCGTaGGCTGCTGGGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: DFERMGGRFALSSSHLDFGSVSS*AAGDGA
Trigger: AGCCCCATCCCCAGCAGCCCACGAAGACACTGACCC...AAAGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATTCTTTCAAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641551.1
CDS-3UTR CCA 90 bp GAGACATTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGTTCACGAGAGTCGGGTaGAGCCTGGGGGCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ETFQRSQSEAASISVSRGFTRVG*SLGAWL
Trigger: CAACCAGGCCCCCAGGCTCCACCCGACTCTCGTGAA...CCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAATGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641551.1
CDS-3UTR CCA 90 bp GAGACATTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGGCAGGCACCAGACTCTaGGGTTCAGTGCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ETFQRSQSEAASISVSRGAGTRL*GSVLAA
Trigger: GGCAGCCAGCACTGAACCCCAGAGTCTGGTGCCTGC...CCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAATGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp GACTTTGAAAGAATGGGAGGCAGGTTTGCCCTGAGCAGTTCCCACCTTGACTTTGCAGGCACCAGACTCTaGGGTTCAGTGCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: DFERMGGRFALSSSHLDFAGTRL*GSVLAA
Trigger: GGCAGCCAGCACTGAACCCCAGAGTCTGGTGCCTGC...AAAGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATTCTTTCAAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp TTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTGCAGGCACCAGACTCTaGGGTTCAGTGCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: FQRSQSEAASISVSRGLTAGTRL*GSVLAA
Trigger: GGCAGCCAGCACTGAACCCCAGAGTCTGGTGCCTGC...AGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR GCA 90 bp GAGACATTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGGGCACCAGCCACTTGTaGCTCTCAGGACACAGACGG +
Preference number: 4 (lower is better)
Translates to: ETFQRSQSEAASISVSRGGTSHL*LSGHRR
Trigger: CCGTCTGTGTCCTGAGAGGCACAAGTGGCTGGTGCC...CCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAATGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641318.1
ENST00000641551.1
CDS-3UTR CCA 90 bp GAGGTCCTGACGACACGTGCCCAAGGTGGTCAGGGCACGCTTGGTTTTATACATAGGTCAGTCTGGCTGTaGGAAAAGATGCCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: EVLTTRAQGGQGTLGFIHRSVWL*EKMPKR
Trigger: CCTCTTGGGCATCTTTTCCCACAGCCAGACTGACCT...ATGTATAAAACCAAGCGTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641318.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp GAGACATTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGTCTGGGGTTCAGTGCTaGCTGCCAATCCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: ETFQRSQSEAASISVSRGSGVQC*LPILQR
Trigger: CCGCTGCAGGATTGGCAGCCAGCACTGAACCCCAGA...CCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAATGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp GAGGTCCTGACGACACGTGCCCAAGGTGGTCAGGGCACGCTTGGTTTTATACATACCTCACAGAAAAAGTaGTCCACGCTCCTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: EVLTTRAQGGQGTLGFIHTSQKK*STLLEP
Trigger: TGGCTCAAGGAGCGTGGATCACTTTTTCTGTGAGGT...ATGTATAAAACCAAGCGTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp GACTTTGAAAGAATGGGAGGCAGGTTTGCCCTGAGCAGTTCCCACCTTGACTTTGAGGCAGGTTTGCCCTaGGCAGTTCCCACCTTGACT +
Preference number: 4 (lower is better)
Translates to: DFERMGGRFALSSSHLDFEAGLP*AVPTLT
Trigger: AGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTC...AAAGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATTCTTTCAAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR GCA 90 bp AGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTTTGAAAGGGTTCAGTGCTGGCTaGCAATCCTGCAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: RSQSEAASISVSRGLTLKGFSAG*QSCSGP
Trigger: TGGACCGCTGCAGGATTGGCAGCCAGCACTGAACCC...TTTCAAAGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp GACTTTGAAAGAATGGGAGGCAGGTTTGCCCTGAGCAGTTCCCACCTTGACTTTGCCTGGGGGCCTGGTTaGGATCCTCATAAACCTGAC +
Preference number: 4 (lower is better)
Translates to: DFERMGGRFALSSSHLDFAWGPG*DPHKPD
Trigger: GTCAGGTTTATGAGGATCCCAACCAGGCCCCCAGGC...AAAGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATTCTTTCAAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641551.1
CDS-3UTR CCA 90 bp AGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTTTGAAATCTGGGGTTCAGTGCTaGCTGCCAATCCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RSQSEAASISVSRGLTLKSGVQC*LPILQR
Trigger: CCGCTGCAGGATTGGCAGCCAGCACTGAACCCCAGA...TTTCAAAGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp GACTTTGAAAGAATGGGAGGCAGGTTTGCCCTGAGCAGTTCCCACCTTGACTTTGACACGTGCCCAAGGTaGTCAGGGCACGCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: DFERMGGRFALSSSHLDFDTCPR*SGHAWF
Trigger: AAACCAAGCGTGCCCTGACCACCTTGGGCACGTGTC...AAAGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATTCTTTCAAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp TTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTGACACGTGCCCAAGGTaGTCAGGGCACGCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: FQRSQSEAASISVSRGLTDTCPR*SGHAWF
Trigger: AAACCAAGCGTGCCCTGACCACCTTGGGCACGTGTC...AGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp AGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTTTGAAAGAGGCAGGTTTGCCCTaGGCAGTTCCCACCTTGACT +
Preference number: 4 (lower is better)
Translates to: RSQSEAASISVSRGLTLKEAGLP*AVPTLT
Trigger: AGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTC...TTTCAAAGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR GCA 90 bp TTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTCCTGACAGGCGTTTCTaGAGGGTCAGTGTCTTCGTG +
Preference number: 4 (lower is better)
Translates to: FQRSQSEAASISVSRGLTPDRRF*RVSVFV
Trigger: CACGAAGACACTGACCCTGCAGAAACGCCTGTCAGG...AGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641551.1
CDS-3UTR GCA 90 bp GACTTTGAAAGAATGGGAGGCAGGTTTGCCCTGAGCAGTTCCCACCTTGACTTTAATGGGAGGCAGGTTTaGCCTGAGCAGTTCCCACCT +
Preference number: 4 (lower is better)
Translates to: DFERMGGRFALSSSHLDFNGRQV*PEQFPP
Trigger: AGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATT...AAAGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATTCTTTCAAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp AGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTTTGAAAGACACGTGCCCAAGGTaGTCAGGGCACGCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: RSQSEAASISVSRGLTLKDTCPR*SGHAWF
Trigger: AAACCAAGCGTGCCCTGACCACCTTGGGCACGTGTC...TTTCAAAGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp GAGGTCCTGACGACACGTGCCCAAGGTGGTCAGGGCACGCTTGGTTTTATACATATGACCATCAACAGGTaGATGGAAACAGACACTCAC +
Preference number: 4 (lower is better)
Translates to: EVLTTRAQGGQGTLGFIHMTINR*METDTH
Trigger: GTGAGTGTCTGTTTCCATTCACCTGTTGATGGTCAT...ATGTATAAAACCAAGCGTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR GCA 90 bp AGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTTTGAAAAATGGGAGGCAGGTTTaGCCTGAGCAGTTCCCACCT +
Preference number: 4 (lower is better)
Translates to: RSQSEAASISVSRGLTLKNGRQV*PEQFPP
Trigger: AGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATT...TTTCAAAGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp GAGGTCCTGACGACACGTGCCCAAGGTGGTCAGGGCACGCTTGGTTTTATACATTCACCCATCTTCCCATaGCTTAGTTGTTCACTGTCA +
Preference number: 4 (lower is better)
Translates to: EVLTTRAQGGQGTLGFIHSPIFP*LSCSLS
Trigger: TGACAGTGAACAACTAAGCCATGGGAAGATGGGTGA...ATGTATAAAACCAAGCGTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641318.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp GACTTTGAAAGAATGGGAGGCAGGTTTGCCCTGAGCAGTTCCCACCTTGACTTTAGGTCAGTCTGGCTGTaGGAAAAGATGCCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: DFERMGGRFALSSSHLDFRSVWL*EKMPKR
Trigger: CCTCTTGGGCATCTTTTCCCACAGCCAGACTGACCT...AAAGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATTCTTTCAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641318.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp TTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTACCTCACAGAAAAAGTaGTCCACGCTCCTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: FQRSQSEAASISVSRGLTTSQKK*STLLEP
Trigger: TGGCTCAAGGAGCGTGGATCACTTTTTCTGTGAGGT...AGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp GACTTTGAAAGAATGGGAGGCAGGTTTGCCCTGAGCAGTTCCCACCTTGACTTTACCTCACAGAAAAAGTaGTCCACGCTCCTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: DFERMGGRFALSSSHLDFTSQKK*STLLEP
Trigger: TGGCTCAAGGAGCGTGGATCACTTTTTCTGTGAGGT...AAAGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATTCTTTCAAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp GACTTTGAAAGAATGGGAGGCAGGTTTGCCCTGAGCAGTTCCCACCTTGACTTTGAGCAGTTCCCACCTTaGCTTTTCCCTTTATCCTCG +
Preference number: 4 (lower is better)
Translates to: DFERMGGRFALSSSHLDFEQFPP*LFPLSS
Trigger: CGAGGATAAAGGGAAAAGTCAAGGTGGGAACTGCTC...AAAGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATTCTTTCAAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp TTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTGAGCAGTTCCCACCTTaGCTTTTCCCTTTATCCTCG +
Preference number: 4 (lower is better)
Translates to: FQRSQSEAASISVSRGLTEQFPP*LFPLSS
Trigger: CGAGGATAAAGGGAAAAGTCAAGGTGGGAACTGCTC...AGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp GACTTTGAAAGAATGGGAGGCAGGTTTGCCCTGAGCAGTTCCCACCTTGACTTTCAGGTCACAGGTAGGTaGGAGACAAATGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: DFERMGGRFALSSSHLDFQVTGR*ETNGCS
Trigger: ACTGCAACCATTTGTCTCTCACCTACCTGTGACCTG...AAAGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATTCTTTCAAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp TTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTCAGGTCACAGGTAGGTaGGAGACAAATGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: FQRSQSEAASISVSRGLTQVTGR*ETNGCS
Trigger: ACTGCAACCATTTGTCTCTCACCTACCTGTGACCTG...AGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp AGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTTTGAAAAGGTCAGTCTGGCTGTaGGAAAAGATGCCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: RSQSEAASISVSRGLTLKRSVWL*EKMPKR
Trigger: CCTCTTGGGCATCTTTTCCCACAGCCAGACTGACCT...TTTCAAAGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641318.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp TTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTGACACTCACAAAGGTTaGGTGACTTCCCAATGTGAC +
Preference number: 4 (lower is better)
Translates to: FQRSQSEAASISVSRGLTDTHKG*VTSQCD
Trigger: GTCACATTGGGAAGTCACTCAACCTTTGTGAGTGTC...AGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp AGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTTTGAAACAGGTCACAGGTAGGTaGGAGACAAATGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: RSQSEAASISVSRGLTLKQVTGR*ETNGCS
Trigger: ACTGCAACCATTTGTCTCTCACCTACCTGTGACCTG...TTTCAAAGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR GCA 90 bp GAAAAAGGCAAAGAACTGTCCAAAAAGAGTTATAGGGACTCAATTTCTGCCATTGCTGGCTGCCAATCCTaGAGCGGTCCAGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: EKGKELSKKSYRDSISAIAGCQS*SGPAPS
Trigger: GGAAGGGGCTGGACCGCTGCAGGATTGGCAGCCAGC...AATGGCAGAAATTGAGTCCCTATAACTCTTTTTGGACAGTTCTTTGCCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp CAATCAACAATGACAATAATAGCAGCCGTTGCTTCTTCATGGAGCTTTAGATTGGACGGCAAGATCCTGTaGGTGGGTCCCTGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: QSTMTIIAAVASSWSFRLDGKIL*VGPCRG
Trigger: TCCCCTGCAGGGACCCACCCACAGGATCTTGCCGTC...CAATCTAAAGCTCCATGAAGAAGCAACGGCTGCTATTATTGTCATTGTTGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641318.1
ENST00000641551.1
CDS-3UTR TCA 90 bp AGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTTTGAAAGACACTCACAAAGGTTaGGTGACTTCCCAATGTGAC +
Preference number: 4 (lower is better)
Translates to: RSQSEAASISVSRGLTLKDTHKG*VTSQCD
Trigger: GTCACATTGGGAAGTCACTCAACCTTTGTGAGTGTC...TTTCAAAGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp GACTTTGAAAGAATGGGAGGCAGGTTTGCCCTGAGCAGTTCCCACCTTGACTTTATGACCATCAACAGGTaGATGGAAACAGACACTCAC +
Preference number: 4 (lower is better)
Translates to: DFERMGGRFALSSSHLDFMTINR*METDTH
Trigger: GTGAGTGTCTGTTTCCATTCACCTGTTGATGGTCAT...AAAGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATTCTTTCAAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp GAGGTCCTGACGACACGTGCCCAAGGTGGTCAGGGCACGCTTGGTTTTATACATCATGGAGCTTTAGATTaGCACATTGTGATCTTTACA +
Preference number: 4 (lower is better)
Translates to: EVLTTRAQGGQGTLGFIHHGALD*HIVIFT
Trigger: TGTAAAGATCACAATGTGTCAATCTAAAGCTCCATG...ATGTATAAAACCAAGCGTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp GAGGTCCTGACGACACGTGCCCAAGGTGGTCAGGGCACGCTTGGTTTTATACATTTATATTACCTCACTTaGTGCTCTCTTCTTGCATTC +
Preference number: 4 (lower is better)
Translates to: EVLTTRAQGGQGTLGFIHLYYLT*CSLLAF
Trigger: GAATGCAAGAAGAGAGCATCAAGTGAGGTAATATAA...ATGTATAAAACCAAGCGTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR GCA 90 bp CAATCAACAATGACAATAATAGCAGCCGTTGCTTCTTCATGGAGCTTTAGATTGGGGTTCAGTGCTGGCTaGCAATCCTGCAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: QSTMTIIAAVASSWSFRLGFSAG*QSCSGP
Trigger: TGGACCGCTGCAGGATTGGCAGCCAGCACTGAACCC...CAATCTAAAGCTCCATGAAGAAGCAACGGCTGCTATTATTGTCATTGTTGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR GCA 90 bp GAAAAAGGCAAAGAACTGTCCAAAAAGAGTTATAGGGACTCAATTTCTGCCATTGGTCCTGACGACACGTaGCCAAGGTGGTCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: EKGKELSKKSYRDSISAIGPDDT*PRWSGH
Trigger: GTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACC...AATGGCAGAAATTGAGTCCCTATAACTCTTTTTGGACAGTTCTTTGCCTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR GCA 90 bp GAAAAAGGCAAAGAACTGTCCAAAAAGAGTTATAGGGACTCAATTTCTGCCATTGGCACCAGCCACTTGTaGCTCTCAGGACACAGACGG +
Preference number: 4 (lower is better)
Translates to: EKGKELSKKSYRDSISAIGTSHL*LSGHRR
Trigger: CCGTCTGTGTCCTGAGAGGCACAAGTGGCTGGTGCC...AATGGCAGAAATTGAGTCCCTATAACTCTTTTTGGACAGTTCTTTGCCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641318.1
ENST00000641551.1
CDS-3UTR GCA 90 bp GAAAAAGGCAAAGAACTGTCCAAAAAGAGTTATAGGGACTCAATTTCTGCCATTGGGTTCAGTGCTGGCTaGCAATCCTGCAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: EKGKELSKKSYRDSISAIGFSAG*QSCSGP
Trigger: TGGACCGCTGCAGGATTGGCAGCCAGCACTGAACCC...AATGGCAGAAATTGAGTCCCTATAACTCTTTTTGGACAGTTCTTTGCCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR GCA 90 bp CAATCAACAATGACAATAATAGCAGCCGTTGCTTCTTCATGGAGCTTTAGATTGGACTCTGGGGTTCAGTaGTGGCTGCCAATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QSTMTIIAAVASSWSFRLDSGVQ*WLPILQ
Trigger: CTGCAGGATTGGCAGCCAGCACTGAACCCCAGAGTC...CAATCTAAAGCTCCATGAAGAAGCAACGGCTGCTATTATTGTCATTGTTGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp AGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTTTGAAATCACCCATCTTCCCATaGCTTAGTTGTTCACTGTCA +
Preference number: 4 (lower is better)
Translates to: RSQSEAASISVSRGLTLKSPIFP*LSCSLS
Trigger: TGACAGTGAACAACTAAGCCATGGGAAGATGGGTGA...TTTCAAAGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641318.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp GAAAAAGGCAAAGAACTGTCCAAAAAGAGTTATAGGGACTCAATTTCTGCCATTTCTGGGGTTCAGTGCTaGCTGCCAATCCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: EKGKELSKKSYRDSISAISGVQC*LPILQR
Trigger: CCGCTGCAGGATTGGCAGCCAGCACTGAACCCCAGA...AATGGCAGAAATTGAGTCCCTATAACTCTTTTTGGACAGTTCTTTGCCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp TTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTCCATCAACAGGTGAATaGAAACAGACACTCACAAAG +
Preference number: 4 (lower is better)
Translates to: FQRSQSEAASISVSRGLTPSTGE*KQTLTK
Trigger: CTTTGTGAGTGTCTGTTTCCATTCACCTGTTGATGG...AGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp GACTTTGAAAGAATGGGAGGCAGGTTTGCCCTGAGCAGTTCCCACCTTGACTTTGCCGTTGCTTCTTCATaGAGCTTTAGATTGACACAT +
Preference number: 4 (lower is better)
Translates to: DFERMGGRFALSSSHLDFAVASS*SFRLTH
Trigger: ATGTGTCAATCTAAAGCTCCATGAAGAAGCAACGGC...AAAGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATTCTTTCAAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR GCA 90 bp GAAAAAGGCAAAGAACTGTCCAAAAAGAGTTATAGGGACTCAATTTCTGCCATTGACTCTGGGGTTCAGTaGTGGCTGCCAATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: EKGKELSKKSYRDSISAIDSGVQ*WLPILQ
Trigger: CTGCAGGATTGGCAGCCAGCACTGAACCCCAGAGTC...AATGGCAGAAATTGAGTCCCTATAACTCTTTTTGGACAGTTCTTTGCCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR GCA 90 bp CAATCAACAATGACAATAATAGCAGCCGTTGCTTCTTCATGGAGCTTTAGATTGAATGGGAGGCAGGTTTaGCCTGAGCAGTTCCCACCT +
Preference number: 4 (lower is better)
Translates to: QSTMTIIAAVASSWSFRLNGRQV*PEQFPP
Trigger: AGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATT...CAATCTAAAGCTCCATGAAGAAGCAACGGCTGCTATTATTGTCATTGTTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp GAGACATTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCATGGAGCTTTAGATTaGCACATTGTGATCTTTACA +
Preference number: 4 (lower is better)
Translates to: ETFQRSQSEAASISVSRGHGALD*HIVIFT
Trigger: TGTAAAGATCACAATGTGTCAATCTAAAGCTCCATG...CCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAATGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp GAGACATTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCATTTTAGGGAGACATaGGACATCAATCAATGTATG +
Preference number: 4 (lower is better)
Translates to: ETFQRSQSEAASISVSRGHFRET*DINQCM
Trigger: CATACATTGATTGATGTCTCATGTCTCCCTAAAATG...CCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAATGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp GACTTTGAAAGAATGGGAGGCAGGTTTGCCCTGAGCAGTTCCCACCTTGACTTTCATTTTAGGGAGACATaGGACATCAATCAATGTATG +
Preference number: 4 (lower is better)
Translates to: DFERMGGRFALSSSHLDFHFRET*DINQCM
Trigger: CATACATTGATTGATGTCTCATGTCTCCCTAAAATG...AAAGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATTCTTTCAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp TTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTCATTTTAGGGAGACATaGGACATCAATCAATGTATG +
Preference number: 4 (lower is better)
Translates to: FQRSQSEAASISVSRGLTHFRET*DINQCM
Trigger: CATACATTGATTGATGTCTCATGTCTCCCTAAAATG...AGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp GAGACATTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGTTATATTACCTCACTTaGTGCTCTCTTCTTGCATTC +
Preference number: 4 (lower is better)
Translates to: ETFQRSQSEAASISVSRGLYYLT*CSLLAF
Trigger: GAATGCAAGAAGAGAGCATCAAGTGAGGTAATATAA...CCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAATGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp TTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTTTATATTACCTCACTTaGTGCTCTCTTCTTGCATTC +
Preference number: 4 (lower is better)
Translates to: FQRSQSEAASISVSRGLTLYYLT*CSLLAF
Trigger: GAATGCAAGAAGAGAGCATCAAGTGAGGTAATATAA...AGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp AGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTTTGAAACATGGAGCTTTAGATTaGCACATTGTGATCTTTACA +
Preference number: 4 (lower is better)
Translates to: RSQSEAASISVSRGLTLKHGALD*HIVIFT
Trigger: TGTAAAGATCACAATGTGTCAATCTAAAGCTCCATG...TTTCAAAGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp GAAAAAGGCAAAGAACTGTCCAAAAAGAGTTATAGGGACTCAATTTCTGCCATTCTCACAAAGGTTGAGTaGCTTCCCAATGTGACACAG +
Preference number: 4 (lower is better)
Translates to: EKGKELSKKSYRDSISAILTKVE*LPNVTQ
Trigger: CTGTGTCACATTGGGAAGTCACTCAACCTTTGTGAG...AATGGCAGAAATTGAGTCCCTATAACTCTTTTTGGACAGTTCTTTGCCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp GAAAAAGGCAAAGAACTGTCCAAAAAGAGTTATAGGGACTCAATTTCTGCCATTGACACTCACAAAGGTTaGGTGACTTCCCAATGTGAC +
Preference number: 4 (lower is better)
Translates to: EKGKELSKKSYRDSISAIDTHKG*VTSQCD
Trigger: GTCACATTGGGAAGTCACTCAACCTTTGTGAGTGTC...AATGGCAGAAATTGAGTCCCTATAACTCTTTTTGGACAGTTCTTTGCCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp GAAAAAGGCAAAGAACTGTCCAAAAAGAGTTATAGGGACTCAATTTCTGCCATTAGTAAGGTAAGCCCATaGCTGCCACCATCTGAATCA +
Preference number: 4 (lower is better)
Translates to: EKGKELSKKSYRDSISAISKVSP*LPPSES
Trigger: TGATTCAGATGGTGGCAGCCATGGGCTTACCTTACT...AATGGCAGAAATTGAGTCCCTATAACTCTTTTTGGACAGTTCTTTGCCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp GAAAAAGGCAAAGAACTGTCCAAAAAGAGTTATAGGGACTCAATTTCTGCCATTTCACCCATCTTCCCATaGCTTAGTTGTTCACTGTCA +
Preference number: 4 (lower is better)
Translates to: EKGKELSKKSYRDSISAISPIFP*LSCSLS
Trigger: TGACAGTGAACAACTAAGCCATGGGAAGATGGGTGA...AATGGCAGAAATTGAGTCCCTATAACTCTTTTTGGACAGTTCTTTGCCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000641318.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp CAATCAACAATGACAATAATAGCAGCCGTTGCTTCTTCATGGAGCTTTAGATTGGCCGTTGCTTCTTCATaGAGCTTTAGATTGACACAT +
Preference number: 4 (lower is better)
Translates to: QSTMTIIAAVASSWSFRLAVASS*SFRLTH
Trigger: ATGTGTCAATCTAAAGCTCCATGAAGAAGCAACGGC...CAATCTAAAGCTCCATGAAGAAGCAACGGCTGCTATTATTGTCATTGTTGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CCA 90 bp GAAAAAGGCAAAGAACTGTCCAAAAAGAGTTATAGGGACTCAATTTCTGCCATTCCATCAACAGGTGAATaGAAACAGACACTCACAAAG +
Preference number: 4 (lower is better)
Translates to: EKGKELSKKSYRDSISAIPSTGE*KQTLTK
Trigger: CTTTGTGAGTGTCTGTTTCCATTCACCTGTTGATGG...AATGGCAGAAATTGAGTCCCTATAACTCTTTTTGGACAGTTCTTTGCCTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp CAATCAACAATGACAATAATAGCAGCCGTTGCTTCTTCATGGAGCTTTAGATTGTTATATTACCTCACTTaGTGCTCTCTTCTTGCATTC +
Preference number: 4 (lower is better)
Translates to: QSTMTIIAAVASSWSFRLLYYLT*CSLLAF
Trigger: GAATGCAAGAAGAGAGCATCAAGTGAGGTAATATAA...CAATCTAAAGCTCCATGAAGAAGCAACGGCTGCTATTATTGTCATTGTTGATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR TCA 90 bp GAAAAAGGCAAAGAACTGTCCAAAAAGAGTTATAGGGACTCAATTTCTGCCATTCATTTTAGGGAGACATaGGACATCAATCAATGTATG +
Preference number: 4 (lower is better)
Translates to: EKGKELSKKSYRDSISAIHFRET*DINQCM
Trigger: CATACATTGATTGATGTCTCATGTCTCCCTAAAATG...AATGGCAGAAATTGAGTCCCTATAACTCTTTTTGGACAGTTCTTTGCCTTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS CCA 90 bp GGAACAAACTCAGCAGAGTCACCTTCACGAGAGTCGGGTGGAGCCTaGGGGCCTGGTTGGGATCCTCATAAACCTGACAGGCGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: GTNSAESPSRESGGA*GPGWDPHKPDRRFC
Trigger: GCAGAAACGCCTGTCAGGTTTATGAGGATCCCAACCAGGCCCCCAGGCTCCACCCGACTCTCGTGAAGGTGACTCTGCTGAGTTTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641551.1
CDS TCA 90 bp GTGAATGGAAACAGACACTCACAAAGGTTGAGTGACTTCCCAATGTaGCACAGGCAAGAAGGGGCACAGCAGGCACCAGACTCTGGGGTT +
Preference number: 5 (lower is better)
Translates to: VNGNRHSQRLSDFPM*HRQEGAQQAPDSGV
Trigger: AACCCCAGAGTCTGGTGCCTGCTGTGCCCCTTCTTGCCTGTGTCACATTGGGAAGTCACTCAACCTTTGTGAGTGTCTGTTTCCATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CAA 90 bp GAGACATTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGAGTGATCCACGCTCCTaGAGCCACAGTAAGGTAAGC +
Preference number: 5 (lower is better)
Translates to: ETFQRSQSEAASISVSRGSDPRS*SHSKVS
Trigger: GCTTACCTTACTGTGGCTCAAGGAGCGTGGATCACT...CCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAATGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CAA 90 bp GACTTTGAAAGAATGGGAGGCAGGTTTGCCCTGAGCAGTTCCCACCTTGACTTTAGTGATCCACGCTCCTaGAGCCACAGTAAGGTAAGC +
Preference number: 5 (lower is better)
Translates to: DFERMGGRFALSSSHLDFSDPRS*SHSKVS
Trigger: GCTTACCTTACTGTGGCTCAAGGAGCGTGGATCACT...AAAGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATTCTTTCAAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CAA 90 bp TTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTAGCAGAGGGCTGACTTaGAAAGAATGGGAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: FQRSQSEAASISVSRGLTSRGLT*KEWEAG
Trigger: ACCTGCCTCCCATTCTTTCAAAGTCAGCCCTCTGCT...AGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CAA 90 bp TTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTGTGAGAGACAAATGGTaGCAGTCTTTTGAGTTTCCG +
Preference number: 5 (lower is better)
Translates to: FQRSQSEAASISVSRGLTVRDKW*QSFEFP
Trigger: CGGAAACTCAAAAGACTGCAACCATTTGTCTCTCAC...AGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CAA 90 bp GACTTTGAAAGAATGGGAGGCAGGTTTGCCCTGAGCAGTTCCCACCTTGACTTTGTGAGAGACAAATGGTaGCAGTCTTTTGAGTTTCCG +
Preference number: 5 (lower is better)
Translates to: DFERMGGRFALSSSHLDFVRDKW*QSFEFP
Trigger: CGGAAACTCAAAAGACTGCAACCATTTGTCTCTCAC...AAAGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATTCTTTCAAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CAA 90 bp GAGGTCCTGACGACACGTGCCCAAGGTGGTCAGGGCACGCTTGGTTTTATACATTTTAGAAAGTTTATTTaGTCAAGGTTGAGGACGTGC +
Preference number: 5 (lower is better)
Translates to: EVLTTRAQGGQGTLGFIHFRKFI*SRLRTC
Trigger: GCACGTCCTCAACCTTGACAAAATAAACTTTCTAAA...ATGTATAAAACCAAGCGTGCCCTGACCACCTTGGGCACGTGTCGTCAGGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CAA 90 bp TTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTGTGAACCCCCAACCTTaGAGACAGATATCAGTTAAT +
Preference number: 5 (lower is better)
Translates to: FQRSQSEAASISVSRGLTVNPQP*RQISVN
Trigger: ATTAACTGATATCTGTCTCAAAGGTTGGGGGTTCAC...AGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CAA 90 bp GACTTTGAAAGAATGGGAGGCAGGTTTGCCCTGAGCAGTTCCCACCTTGACTTTGTGAACCCCCAACCTTaGAGACAGATATCAGTTAAT +
Preference number: 5 (lower is better)
Translates to: DFERMGGRFALSSSHLDFVNPQP*RQISVN
Trigger: ATTAACTGATATCTGTCTCAAAGGTTGGGGGTTCAC...AAAGTCAAGGTGGGAACTGCTCAGGGCAAACCTGCCTCCCATTCTTTCAAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CAA 90 bp TTCCAAAGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTTTTAGAAAGTTTATTTaGTCAAGGTTGAGGACGTGC +
Preference number: 5 (lower is better)
Translates to: FQRSQSEAASISVSRGLTFRKFI*SRLRTC
Trigger: GCACGTCCTCAACCTTGACAAAATAAACTTTCTAAA...AGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCTTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CAA 90 bp GAAAAAGGCAAAGAACTGTCCAAAAAGAGTTATAGGGACTCAATTTCTGCCATTAGTGATCCACGCTCCTaGAGCCACAGTAAGGTAAGC +
Preference number: 5 (lower is better)
Translates to: EKGKELSKKSYRDSISAISDPRS*SHSKVS
Trigger: GCTTACCTTACTGTGGCTCAAGGAGCGTGGATCACT...AATGGCAGAAATTGAGTCCCTATAACTCTTTTTGGACAGTTCTTTGCCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CAA 90 bp AGGAGTCAATCAGAAGCTGCATCGATCTCAGTGAGCAGAGGGCTGACTTTGAAATTTAGAAAGTTTATTTaGTCAAGGTTGAGGACGTGC +
Preference number: 5 (lower is better)
Translates to: RSQSEAASISVSRGLTLKFRKFI*SRLRTC
Trigger: GCACGTCCTCAACCTTGACAAAATAAACTTTCTAAA...TTTCAAAGTCAGCCCTCTGCTCACTGAGATCGATGCAGCTTCTGATTGACTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CAA 90 bp GAAAAAGGCAAAGAACTGTCCAAAAAGAGTTATAGGGACTCAATTTCTGCCATTGTGAACCCCCAACCTTaGAGACAGATATCAGTTAAT +
Preference number: 5 (lower is better)
Translates to: EKGKELSKKSYRDSISAIVNPQP*RQISVN
Trigger: ATTAACTGATATCTGTCTCAAAGGTTGGGGGTTCAC...AATGGCAGAAATTGAGTCCCTATAACTCTTTTTGGACAGTTCTTTGCCTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS-3UTR CAA 90 bp GAAAAAGGCAAAGAACTGTCCAAAAAGAGTTATAGGGACTCAATTTCTGCCATTTTTAGAAAGTTTATTTaGTCAAGGTTGAGGACGTGC +
Preference number: 5 (lower is better)
Translates to: EKGKELSKKSYRDSISAIFRKFI*SRLRTC
Trigger: GCACGTCCTCAACCTTGACAAAATAAACTTTCTAAA...AATGGCAGAAATTGAGTCCCTATAACTCTTTTTGGACAGTTCTTTGCCTTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS CCA 72 bp ACACAGGCAAGAAGGGGCACAGCAGGCACCAGACTCTaGGGTTCAGTGCTGGCTGCCAATCCTGCAGCGGTC +
Preference number: 6 (lower is better)
Translates to: TQARRGTAGTRL*GSVLAANPAAV
Trigger: GACCGCTGCAGGATTGGCAGCCAGCACTGAACCCCAGAGTCTGGTGCCTGCTGTGCCCCTTCTTGCCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1
CDS CCA 72 bp CCTTCACGAGAGTCGGGTGGAGCCTGGGGGCCTGGTTaGGATCCTCATAAACCTGACAGGCGTTTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: PSRESGGAWGPG*DPHKPDRRFCR
Trigger: CCTGCAGAAACGCCTGTCAGGTTTATGAGGATCCCAACCAGGCCCCCAGGCTCCACCCGACTCTCGTGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641551.1
CDS CCA 72 bp TCAGCAGAGTCACCTTCACGAGAGTCGGGTGGAGCCTaGGGGCCTGGTTGGGATCCTCATAAACCTGACAGG +
Preference number: 6 (lower is better)
Translates to: SAESPSRESGGA*GPGWDPHKPDR
Trigger: CCTGTCAGGTTTATGAGGATCCCAACCAGGCCCCCAGGCTCCACCCGACTCTCGTGAAGGTGACTCTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641551.1
CDS GCA 72 bp CCTGGTTGGGATCCTCATAAACCTGACAGGCGTTTCTaGAGGGTCAGTGTCTTCGTGGGCTGCTGGGGATGG +
Preference number: 6 (lower is better)
Translates to: PGWDPHKPDRRF*RVSVFVGCWGW
Trigger: CCATCCCCAGCAGCCCACGAAGACACTGACCCTGCAGAAACGCCTGTCAGGTTTATGAGGATCCCAACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641551.1
CDS CCA 72 bp GATCCACGCTCCTTGAGCCACAGTAAGGTAAGCCCATaGCTGCCACCATCTGAATCACTCCATCTATTATCC +
Preference number: 6 (lower is better)
Translates to: DPRSLSHSKVSP*LPPSESLHLLS
Trigger: GGATAATAGATGGAGTGATTCAGATGGTGGCAGCCATGGGCTTACCTTACTGTGGCTCAAGGAGCGTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641318.1
ENST00000641367.1
ENST00000641551.1
ENST00000642036.1