Pregenerated sensors for OR2T1 (Homo sapiens)
Ensembl gene IDs: ENSG00000175143, ENSG00000273508Ensembl transcript IDs: ENST00000611851.1, ENST00000613540.1, ENST00000642005.1
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTTCTGCCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATaGATGGGTTCTTATCACCCTCCTGTTCAGCTTCATGAGTTTAGC | + |
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Preference number: 1 (lower is better) Translates to: SFCLCGVGTCHPPGT*MGSYHPPVQLHEFS Trigger: GCTAAACTCATGAAGCTGAACAGGAGGGTGATAAGAACCCATCCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGGCAGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| 3UTR-3UTR TCA 90 bp | CATAAGAGCTTCTGCCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGCCACGAAGGCCTGTCTaGTCGGATTTTTCTTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: HKSFCLCGVGTCHPPGTWPRRPV*SDFSWP Trigger: AGGCCAAGAAAAATCCGATCAGACAGGCCTTCGTGG...CCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGGCAGAAGCTCTTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| 3UTR-3UTR TCA 90 bp | CCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGATGGGTTCTTATCAAGAAAAAGAAGCAGGTaGAAAGAGGGAAGGCGAAGA | + |
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Preference number: 2 (lower is better) Translates to: PLWSWDMPPSRHMDGFLSRKRSR*KEGRRR Trigger: TCTTCGCCTTCCCTCTTTTCACCTGCTTCTTTTTCT...TGATAAGAACCCATCCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| 3UTR-3UTR TCA 90 bp | ATGGGTTCTTATCACCCTCCTGTTCAGCTTCATGAGTTTAGCTGTCCAGAAGTTAAAGCACAGCCACAGTaGCCACAGAGTCCCCCATTT | + |
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Preference number: 2 (lower is better) Translates to: MGSYHPPVQLHEFSCPEVKAQPQ*PQSPPF Trigger: AAATGGGGGACTCTGTGGTCACTGTGGCTGTGCTTT...AACTTCTGGACAGCTAAACTCATGAAGCTGAACAGGAGGGTGATAAGAACCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| 3UTR-3UTR CCA 90 bp | GGGGATCCCACGGCCCTTCCTTGGGTTCAGTTAGTTTACTATAAAGGCTCACAGTCTGTCCTCTCCTTTTaGCCCTTATATGGAGACTTT | + |
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Preference number: 2 (lower is better) Translates to: GDPTALPWVQLVYYKGSQSVLSF*PLYGDF Trigger: AAAGTCTCCATATAAGGGCCAAAAGGAGAGGACAGA...CTGTGAGCCTTTATAGTAAACTAACTGAACCCAAGGAAGGGCCGTGGGATCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| 3UTR CCA 72 bp | GTGGAGTTGGGACATGCCACCCTCCAGGCACATGGATaGGTTCTTATCACCCTCCTGTTCAGCTTCATGAGT | + |
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Preference number: 3 (lower is better) Translates to: VELGHATLQAHG*VLITLLFSFMS Trigger: ACTCATGAAGCTGAACAGGAGGGTGATAAGAACCCATCCATGTGCCTGGAGGGTGGCATGTCCCAACTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| 3UTR-3UTR CAA 90 bp | CATAAGAGCTTCTGCCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGTTCTGTCCTCTCCTTTaGGCCCTTATATGGAGACTT | + |
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Preference number: 3 (lower is better) Translates to: HKSFCLCGVGTCHPPGTWFCPLL*ALIWRL Trigger: AAGTCTCCATATAAGGGCCAAAAGGAGAGGACAGAA...CCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGGCAGAAGCTCTTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| 3UTR-3UTR CAA 90 bp | CCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGATGGGTTCTTATCACTGATCGGATTTTTCTaGGCCTCTCTGTATAGCATT | + |
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Preference number: 3 (lower is better) Translates to: PLWSWDMPPSRHMDGFLSLIGFF*ASLYSI Trigger: AATGCTATACAGAGAGGCCAAGAAAAATCCGATCAG...TGATAAGAACCCATCCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| 3UTR TCA 72 bp | CATTCCCTCCCCCAGGGTATGAGAGAAGACCTCTTTTaGAACAGAGGTCTTATGACATACAGTCAGACAAGG | + |
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Preference number: 3 (lower is better) Translates to: HSLPQGMREDLF*NRGLMTYSQTR Trigger: CCTTGTCTGACTGTATGTCATAAGACCTCTGTTTCAAAAGAGGTCTTCTCTCATACCCTGGGGGAGGGAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| 3UTR TCA 72 bp | TGTCCTCTCCTTTTGGCCCTTATATGGAGACTTTATTaGATAGTCATGATTGAAGCATGGACAATTGCACAG | + |
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Preference number: 3 (lower is better) Translates to: CPLLLALIWRLY*IVMIEAWTIAQ Trigger: CTGTGCAATTGTCCATGCTTCAATCATGACTATTCAATAAAGTCTCCATATAAGGGCCAAAAGGAGAGGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR TCA 90 bp | CATAAGAGCTTCTGCCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGCTTCCTGCCCTCCACTaGGCTCATGCACTGAACTGT | + |
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Preference number: 4 (lower is better) Translates to: HKSFCLCGVGTCHPPGTWLPALH*AHALNC Trigger: ACAGTTCAGTGCATGAGCTCAGTGGAGGGCAGGAAG...CCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGGCAGAAGCTCTTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR TCA 90 bp | GGGGATCCCACGGCCCTTCCTTGGGTTCAGTTAGTTTACTATAAAGGCTCACAGCCCTTTGAGGACCCTTaGACCTCCCCAAGGCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: GDPTALPWVQLVYYKGSQPFEDP*TSPRPS Trigger: AGAGGGCCTTGGGGAGGTTCAAGGGTCCTCAAAGGG...CTGTGAGCCTTTATAGTAAACTAACTGAACCCAAGGAAGGGCCGTGGGATCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| 3UTR CAA 72 bp | GGGACACCCACGAAGGCCTGTCTGATCGGATTTTTCTaGGCCTCTCTGTATAGCATTCCCTCCCCCAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: GTPTKACLIGFF*ASLYSIPSPRV Trigger: TACCCTGGGGGAGGGAATGCTATACAGAGAGGCCAAGAAAAATCCGATCAGACAGGCCTTCGTGGGTGTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR TCA 90 bp | CATAAGAGCTTCTGCCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGCACAGTCATGTGGGATaGGCAAGTGGCAAATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: HKSFCLCGVGTCHPPGTWHSHVG*ASGKCL Trigger: AAGGCATTTGCCACTTGCTCATCCCACATGACTGTG...CCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGGCAGAAGCTCTTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR TCA 90 bp | CCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGATGGGTTCTTATCAAAAGCACAGCCACAGTaGCCACAGAGTCCCCCATTT | + |
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Preference number: 4 (lower is better) Translates to: PLWSWDMPPSRHMDGFLSKAQPQ*PQSPPF Trigger: AAATGGGGGACTCTGTGGTCACTGTGGCTGTGCTTT...TGATAAGAACCCATCCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR GCA 90 bp | CATAAGAGCTTCTGCCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGCCCCCATTTACCATATaGATGGGAAGGAGTCGACTG | + |
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Preference number: 4 (lower is better) Translates to: HKSFCLCGVGTCHPPGTWPPFTI*MGRSRL Trigger: CAGTCGACTCCTTCCCATGCATATGGTAAATGGGGG...CCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGGCAGAAGCTCTTATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR CCA 90 bp | CATAAGAGCTTCTGCCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGGACTTTGTCCTGGGCTaGCTTGTGGTAAGAATGTGG | + |
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Preference number: 4 (lower is better) Translates to: HKSFCLCGVGTCHPPGTWDFVLG*LVVRMW Trigger: CCACATTCTTACCACAAGCCAGCCCAGGACAAAGTC...CCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGGCAGAAGCTCTTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR TCA 90 bp | CCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGATGGGTTCTTATCAACTGAGCTCATGCACTaGACTGTAGTCAGGATTCGG | + |
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Preference number: 4 (lower is better) Translates to: PLWSWDMPPSRHMDGFLSTELMH*TVVRIR Trigger: CCGAATCCTGACTACAGTTCAGTGCATGAGCTCAGT...TGATAAGAACCCATCCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR GCA 90 bp | CATAAGAGCTTCTGCCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGCCCATTGGCCATCAGTaGGGTGAAGAAGATGATAGA | + |
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Preference number: 4 (lower is better) Translates to: HKSFCLCGVGTCHPPGTWPIGHQ*GEEDDR Trigger: TCTATCATCTTCTTCACCGCACTGATGGCCAATGGG...CCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGGCAGAAGCTCTTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR GCA 90 bp | CCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGATGGGTTCTTATCAGAGCATAAGAGCTTCTaGCTCTGTGGAGTTGGGACA | + |
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Preference number: 4 (lower is better) Translates to: PLWSWDMPPSRHMDGFLSEHKSF*LCGVGT Trigger: TGTCCCAACTCCACAGAGGCAGAAGCTCTTATGCTC...TGATAAGAACCCATCCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR CCA 90 bp | CCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGATGGGTTCTTATCACAACTTCAGGACTGCTaGTGCCTCACAGAAGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: PLWSWDMPPSRHMDGFLSQLQDC*CLTEEV Trigger: CACTTCTTCTGTGAGGCACCAGCAGTCCTGAAGTTG...TGATAAGAACCCATCCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR TCA 90 bp | CCCACGGCCCTTCCTTGGGTTCAGTTAGTTTACTATAAAGGCTCACAGAATTCACCTCCTGACACCCTTTaGGGACCCTTGAACCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: PTALPWVQLVYYKGSQNSPPDTL*GPLNLP Trigger: GGGGAGGTTCAAGGGTCCTCAAAGGGTGTCAGGAGG...TGAATTCTGTGAGCCTTTATAGTAAACTAACTGAACCCAAGGAAGGGCCGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR GCA 90 bp | GCCACAGTGACCACAGAGTCCCCCATTTACCATATGCATGGGAAGGAGTCGACTTGCCAACTTCAGGACTaGTGGTGCCTCACAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: ATVTTESPIYHMHGKESTCQLQD*WCLTEE Trigger: TTCTTCTGTGAGGCACCAGCAGTCCTGAAGTTGGCA...AGTCGACTCCTTCCCATGCATATGGTAAATGGGGGACTCTGTGGTCACTGTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR GCA 90 bp | GGGGATCCCACGGCCCTTCCTTGGGTTCAGTTAGTTTACTATAAAGGCTCACAGGTAGAGGGCTGTGTCTaGACATGCCAACTTCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: GDPTALPWVQLVYYKGSQVEGCV*TCQLQD Trigger: GTCCTGAAGTTGGCATGTGCAGACACAGCCCTCTAC...CTGTGAGCCTTTATAGTAAACTAACTGAACCCAAGGAAGGGCCGTGGGATCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR GCA 90 bp | GATGAAAGCACAGCCACAGTGACCACAGAGTCCCCCATTTACCATATGCATGGGCAAATGCCTTCTTCCTaGCCTCCACTGAGCTCATGC | + |
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Preference number: 4 (lower is better) Translates to: DESTATVTTESPIYHMHGQMPSS*PPLSSC Trigger: GCATGAGCTCAGTGGAGGGCAGGAAGAAGGCATTTG...CCCATGCATATGGTAAATGGGGGACTCTGTGGTCACTGTGGCTGTGCTTTCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR CCA 90 bp | CCCACGGCCCTTCCTTGGGTTCAGTTAGTTTACTATAAAGGCTCACAGAATTCACTGCCTCTGTGGAGTTaGGACATGCCACCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PTALPWVQLVYYKGSQNSLPLWS*DMPPSR Trigger: CCTGGAGGGTGGCATGTCCCAACTCCACAGAGGCAG...TGAATTCTGTGAGCCTTTATAGTAAACTAACTGAACCCAAGGAAGGGCCGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR TCA 90 bp | CCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGATGGGTTCTTATCAGTTGTACTCTTCCATTaGTCCTACAGTTGTGCCGAT | + |
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Preference number: 4 (lower is better) Translates to: PLWSWDMPPSRHMDGFLSVVLFH*SYSCAD Trigger: ATCGGCACAACTGTAGGATCAATGGAAGAGTACAAC...TGATAAGAACCCATCCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR GCA 90 bp | CCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGATGGGTTCTTATCACCCAAACCAGGAACCTaGTATAATCATCCAACAGAC | + |
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Preference number: 4 (lower is better) Translates to: PLWSWDMPPSRHMDGFLSPKPGT*YNHPTD Trigger: GTCTGTTGGATGATTATAGCAGGTTCCTGGTTTGGG...TGATAAGAACCCATCCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR CCA 90 bp | GCCACAGTGACCACAGAGTCCCCCATTTACCATATGCATGGGAAGGAGTCGACTACCCCACAAAGGAAATaGTCCTTTGATCCAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: ATVTTESPIYHMHGKESTTPQRK*SFDPAG Trigger: ACCTGCTGGATCAAAGGACCATTTCCTTTGTGGGGT...AGTCGACTCCTTCCCATGCATATGGTAAATGGGGGACTCTGTGGTCACTGTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR CCA 90 bp | CATAAGAGCTTCTGCCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGTCTGTCCTCTCCTTTTaGCCCTTATATGGAGACTTT | + |
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Preference number: 4 (lower is better) Translates to: HKSFCLCGVGTCHPPGTWSVLSF*PLYGDF Trigger: AAAGTCTCCATATAAGGGCCAAAAGGAGAGGACAGA...CCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGGCAGAAGCTCTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR CCA 90 bp | GATGAAAGCACAGCCACAGTGACCACAGAGTCCCCCATTTACCATATGCATGGGCAAGTGATTGTAAATTaGGGATCCCACGGCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: DESTATVTTESPIYHMHGQVIVN*GSHGPS Trigger: GGAAGGGCCGTGGGATCCCCAATTTACAATCACTTG...CCCATGCATATGGTAAATGGGGGACTCTGTGGTCACTGTGGCTGTGCTTTCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR TCA 90 bp | CCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGATGGGTTCTTATCACCCCCAAGTATCCTTTaGCTTGAAAGGATTGTTACT | + |
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Preference number: 4 (lower is better) Translates to: PLWSWDMPPSRHMDGFLSPPSIL*LERIVT Trigger: AGTAACAATCCTTTCAAGTCAAAGGATACTTGGGGG...TGATAAGAACCCATCCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR TCA 90 bp | CATAAGAGCTTCTGCCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGCAGATAATTTCTTTGTaGCCAAAAGCGGGGAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: HKSFCLCGVGTCHPPGTWQIISL*PKAGKD Trigger: ATCTTTCCCCGCTTTTGGTCACAAAGAAATTATCTG...CCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGGCAGAAGCTCTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR TCA 90 bp | GGGGATCCCACGGCCCTTCCTTGGGTTCAGTTAGTTTACTATAAAGGCTCACAGAAAAGACACAGAGGGTaGGGTCTGGAAGAGCATAAG | + |
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Preference number: 4 (lower is better) Translates to: GDPTALPWVQLVYYKGSQKRHRG*GLEEHK Trigger: CTTATGCTCTTCCAGACCTCACCCTCTGTGTCTTTT...CTGTGAGCCTTTATAGTAAACTAACTGAACCCAAGGAAGGGCCGTGGGATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR CCA 90 bp | CCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGATGGGTTCTTATCAAGGCGCAAATCTGTTTaGATCAGGAAGATCATAACC | + |
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Preference number: 4 (lower is better) Translates to: PLWSWDMPPSRHMDGFLSRRKSV*IRKIIT Trigger: GGTTATGATCTTCCTGATCCAAACAGATTTGCGCCT...TGATAAGAACCCATCCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR TCA 90 bp | GATGAAAGCACAGCCACAGTGACCACAGAGTCCCCCATTTACCATATGCATGGGAGAAAAAGAAGCAGGTaGAAAGAGGGAAGGCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: DESTATVTTESPIYHMHGRKRSR*KEGRRR Trigger: TCTTCGCCTTCCCTCTTTTCACCTGCTTCTTTTTCT...CCCATGCATATGGTAAATGGGGGACTCTGTGGTCACTGTGGCTGTGCTTTCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR TCA 90 bp | GCCACAGTGACCACAGAGTCCCCCATTTACCATATGCATGGGAAGGAGTCGACTACATCTAAATGCCTTTaGAGAGCAGAAGTATGCTTG | + |
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Preference number: 4 (lower is better) Translates to: ATVTTESPIYHMHGKESTTSKCL*RAEVCL Trigger: CAAGCATACTTCTGCTCTTCAAAGGCATTTAGATGT...AGTCGACTCCTTCCCATGCATATGGTAAATGGGGGACTCTGTGGTCACTGTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR TCA 90 bp | GCCACAGTGACCACAGAGTCCCCCATTTACCATATGCATGGGAAGGAGTCGACTATAACTATGGAGTTATaGACCAGAAACCCTAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: ATVTTESPIYHMHGKESTITMEL*TRNPSQ Trigger: TTGGCTAGGGTTTCTGGTTCATAACTCCATAGTTAT...AGTCGACTCCTTCCCATGCATATGGTAAATGGGGGACTCTGTGGTCACTGTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR TCA 90 bp | ATGGGTTCTTATCACCCTCCTGTTCAGCTTCATGAGTTTAGCTGTCCAGAAGTTCCCTCCCCCAGGGTATaGGAGAAGACCTCTTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: MGSYHPPVQLHEFSCPEVPSPRV*EKTSFE Trigger: TTCAAAAGAGGTCTTCTCTCATACCCTGGGGGAGGG...AACTTCTGGACAGCTAAACTCATGAAGCTGAACAGGAGGGTGATAAGAACCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR TCA 90 bp | ATGGGTTCTTATCACCCTCCTGTTCAGCTTCATGAGTTTAGCTGTCCAGAAGTTCCACGAAGGCCTGTCTaGTCGGATTTTTCTTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: MGSYHPPVQLHEFSCPEVPRRPV*SDFSWP Trigger: AGGCCAAGAAAAATCCGATCAGACAGGCCTTCGTGG...AACTTCTGGACAGCTAAACTCATGAAGCTGAACAGGAGGGTGATAAGAACCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR GCA 90 bp | CCCACGGCCCTTCCTTGGGTTCAGTTAGTTTACTATAAAGGCTCACAGAATTCAGGAAGTGTTGAGCTGTaGACCCCACAAAGGAAATGG | + |
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Preference number: 4 (lower is better) Translates to: PTALPWVQLVYYKGSQNSGSVEL*TPQRKW Trigger: CCATTTCCTTTGTGGGGTGCACAGCTCAACACTTCC...TGAATTCTGTGAGCCTTTATAGTAAACTAACTGAACCCAAGGAAGGGCCGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR TCA 90 bp | GGGGATCCCACGGCCCTTCCTTGGGTTCAGTTAGTTTACTATAAAGGCTCACAGGGCAAAAATAAGACCTaGGGTTTCCTTTCTGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: GDPTALPWVQLVYYKGSQGKNKT*GFLSVE Trigger: TTCAACAGAAAGGAAACCTCAGGTCTTATTTTTGCC...CTGTGAGCCTTTATAGTAAACTAACTGAACCCAAGGAAGGGCCGTGGGATCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR TCA 90 bp | GCCACAGTGACCACAGAGTCCCCCATTTACCATATGCATGGGAAGGAGTCGACTGTTGTCCTGTACTTTTaGCCAAGTGATTGTAAATTG | + |
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Preference number: 4 (lower is better) Translates to: ATVTTESPIYHMHGKESTVVLYF*PSDCKL Trigger: CAATTTACAATCACTTGGTCAAAAGTACAGGACAAC...AGTCGACTCCTTCCCATGCATATGGTAAATGGGGGACTCTGTGGTCACTGTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| 3UTR CAA 72 bp | GCATTCCCTCCCCCAGGGTATGAGAGAAGACCTCTTTaGAAACAGAGGTCTTATGACATACAGTCAGACAAG | + |
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Preference number: 4 (lower is better) Translates to: AFPPPGYERRPL*KQRSYDIQSDK Trigger: CTTGTCTGACTGTATGTCATAAGACCTCTGTTTCAAAAGAGGTCTTCTCTCATACCCTGGGGGAGGGAATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR GCA 90 bp | ATGGGTTCTTATCACCCTCCTGTTCAGCTTCATGAGTTTAGCTGTCCAGAAGTTGCCTTCCATTTCCAGTaGCAATTAAAAGCCCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: MGSYHPPVQLHEFSCPEVAFHFQ*QLKAPS Trigger: ACTTGGGGCTTTTAATTGGCACTGGAAATGGAAGGC...AACTTCTGGACAGCTAAACTCATGAAGCTGAACAGGAGGGTGATAAGAACCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR CCA 90 bp | ATGGGTTCTTATCACCCTCCTGTTCAGCTTCATGAGTTTAGCTGTCCAGAAGTTCATTTACCATATGCATaGGAAGGAGTCGACTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: MGSYHPPVQLHEFSCPEVHLPYA*EGVDCQ Trigger: TTGACAGTCGACTCCTTCCCATGCATATGGTAAATG...AACTTCTGGACAGCTAAACTCATGAAGCTGAACAGGAGGGTGATAAGAACCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS TCA 90 bp | GCATGGGAAGGAGTCGACTGTCAAAAGACACCTCCTGACACCCTTTaGGGACCCTTGAACCTCCCCAAGGCCCTCTTCAGAGCTCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: AWEGVDCQKTPPDTL*GPLNLPKALFRAPV Trigger: GACTGGAGCTCTGAAGAGGGCCTTGGGGAGGTTCAAGGGTCCTCAAAGGGTGTCAGGAGGTGTCTTTTGACAGTCGACTCCTTCCCATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR CAA 90 bp | CATAAGAGCTTCTGCCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGGAGGTTTCCTTTCTGTaGAACAGCCCCATGAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: HKSFCLCGVGTCHPPGTWEVSFL*NSPMKV Trigger: CACTTTCATGGGGCTGTTCAACAGAAAGGAAACCTC...CCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGGCAGAAGCTCTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR CAA 90 bp | CCTCTGTGGAGTTGGGACATGCCACCCTCCAGGCACATGGATGGGTTCTTATCAAAGGTAGAGGAAGTGTaGAGCTGTGCACCCCACAAA | + |
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Preference number: 5 (lower is better) Translates to: PLWSWDMPPSRHMDGFLSKVEEV*SCAPHK Trigger: TTTGTGGGGTGCACAGCTCAACACTTCCTCTACCTT...TGATAAGAACCCATCCATGTGCCTGGAGGGTGGCATGTCCCAACTCCACAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR CAA 90 bp | GATGAAAGCACAGCCACAGTGACCACAGAGTCCCCCATTTACCATATGCATGGGAAGATCATAACCCCATaGGCCATCAGTGCGGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: DESTATVTTESPIYHMHGKIITP*AISAVK Trigger: CTTCACCGCACTGATGGCCAATGGGGTTATGATCTT...CCCATGCATATGGTAAATGGGGGACTCTGTGGTCACTGTGGCTGTGCTTTCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR CAA 90 bp | GATGAAAGCACAGCCACAGTGACCACAGAGTCCCCCATTTACCATATGCATGGGTGTTGTACTCTTCCATaGATCCTACAGTTGTGCCGA | + |
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Preference number: 5 (lower is better) Translates to: DESTATVTTESPIYHMHGCCTLP*ILQLCR Trigger: TCGGCACAACTGTAGGATCAATGGAAGAGTACAACA...CCCATGCATATGGTAAATGGGGGACTCTGTGGTCACTGTGGCTGTGCTTTCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR CAA 90 bp | GCCACAGTGACCACAGAGTCCCCCATTTACCATATGCATGGGAAGGAGTCGACTAAGGCGCAAATCTGTTaGGATCAGGAAGATCATAAC | + |
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Preference number: 5 (lower is better) Translates to: ATVTTESPIYHMHGKESTKAQIC*DQEDHN Trigger: GTTATGATCTTCCTGATCCAAACAGATTTGCGCCTT...AGTCGACTCCTTCCCATGCATATGGTAAATGGGGGACTCTGTGGTCACTGTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR CAA 90 bp | GGGGATCCCACGGCCCTTCCTTGGGTTCAGTTAGTTTACTATAAAGGCTCACAGTTCTGTCCTCTCCTTTaGGCCCTTATATGGAGACTT | + |
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Preference number: 5 (lower is better) Translates to: GDPTALPWVQLVYYKGSQFCPLL*ALIWRL Trigger: AAGTCTCCATATAAGGGCCAAAAGGAGAGGACAGAA...CTGTGAGCCTTTATAGTAAACTAACTGAACCCAAGGAAGGGCCGTGGGATCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR CAA 90 bp | GCCACAGTGACCACAGAGTCCCCCATTTACCATATGCATGGGAAGGAGTCGACTAAAGGAAATGGTCCTTaGATCCAGCAGGTAATTAAC | + |
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Preference number: 5 (lower is better) Translates to: ATVTTESPIYHMHGKESTKGNGP*IQQVIN Trigger: GTTAATTACCTGCTGGATCAAAGGACCATTTCCTTT...AGTCGACTCCTTCCCATGCATATGGTAAATGGGGGACTCTGTGGTCACTGTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR CAA 90 bp | GATGAAAGCACAGCCACAGTGACCACAGAGTCCCCCATTTACCATATGCATGGGCTGATCGGATTTTTCTaGGCCTCTCTGTATAGCATT | + |
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Preference number: 5 (lower is better) Translates to: DESTATVTTESPIYHMHGLIGFF*ASLYSI Trigger: AATGCTATACAGAGAGGCCAAGAAAAATCCGATCAG...CCCATGCATATGGTAAATGGGGGACTCTGTGGTCACTGTGGCTGTGCTTTCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR CAA 90 bp | GATGAAAGCACAGCCACAGTGACCACAGAGTCCCCCATTTACCATATGCATGGGCCATTGATCCTACAGTaGTGCCGATATAAGGTAATA | + |
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Preference number: 5 (lower is better) Translates to: DESTATVTTESPIYHMHGPLILQ*CRYKVI Trigger: TATTACCTTATATCGGCACAACTGTAGGATCAATGG...CCCATGCATATGGTAAATGGGGGACTCTGTGGTCACTGTGGCTGTGCTTTCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR CAA 90 bp | CCCACGGCCCTTCCTTGGGTTCAGTTAGTTTACTATAAAGGCTCACAGAATTCATTAATCTCCCGGGAATaGCAGAAGGGAAAGCTCATG | + |
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Preference number: 5 (lower is better) Translates to: PTALPWVQLVYYKGSQNSLISRE*QKGKLM Trigger: CATGAGCTTTCCCTTCTGCAATTCCCGGGAGATTAA...TGAATTCTGTGAGCCTTTATAGTAAACTAACTGAACCCAAGGAAGGGCCGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS-3UTR CAA 90 bp | CCCACGGCCCTTCCTTGGGTTCAGTTAGTTTACTATAAAGGCTCACAGAATTCATCTGTAGAGGATGTGTaGTACTCTTCCATTGATCCT | + |
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Preference number: 5 (lower is better) Translates to: PTALPWVQLVYYKGSQNSSVEDV*YSSIDP Trigger: AGGATCAATGGAAGAGTACAACACATCCTCTACAGA...TGAATTCTGTGAGCCTTTATAGTAAACTAACTGAACCCAAGGAAGGGCCGTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS TCA 72 bp | GGAGTCGACTGTCAAAAGACACCTCCTGACACCCTTTaGGGACCCTTGAACCTCCCCAAGGCCCTCTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: GVDCQKTPPDTL*GPLNLPKALFR Trigger: TCTGAAGAGGGCCTTGGGGAGGTTCAAGGGTCCTCAAAGGGTGTCAGGAGGTGTCTTTTGACAGTCGACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS CCA 72 bp | CACAGTGACCACAGAGTCCCCCATTTACCATATGCATaGGAAGGAGTCGACTGTCAAAAGACACCTCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: HSDHRVPHLPYA*EGVDCQKTPPD Trigger: GTCAGGAGGTGTCTTTTGACAGTCGACTCCTTCCCATGCATATGGTAAATGGGGGACTCTGTGGTCACTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642005.1 |
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| CDS CAA 72 bp | GTGTTGAGCTGTGCACCCCACAAAGGAAATGGTCCTTaGATCCAGCAGGTAATTAACCAGCATCTTAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: VLSCAPHKGNGP*IQQVINQHLRH Trigger: GTGCCTAAGATGCTGGTTAATTACCTGCTGGATCAAAGGACCATTTCCTTTGTGGGGTGCACAGCTCAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000611851.1 ENST00000613540.1 ENST00000642005.1 |
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| CDS CAA 72 bp | AACAGCCCCATGAAAGTGAAGTCTGTAGAGGATGTGTaGTACTCTTCCATTGATCCTACAGTTGTGCCGATA | + |
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Preference number: 6 (lower is better) Translates to: NSPMKVKSVEDV*YSSIDPTVVPI Trigger: TATCGGCACAACTGTAGGATCAATGGAAGAGTACAACACATCCTCTACAGACTTCACTTTCATGGGGCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000611851.1 ENST00000613540.1 ENST00000642005.1 |
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