Pregenerated sensors for OR2K2 (Homo sapiens)
Ensembl gene IDs: ENSG00000171133Ensembl transcript IDs: ENST00000302681.3, ENST00000374428.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | GACAGATACATCTGTACAGCACACCCAGAAAAGATAATGGTTTTCTaGGATGACAGCAAGTTCACCAGCAAAGTAGGAACAGAGGCAGAT | + |
Preference number: 5 (lower is better) Translates to: DRYICTAHPEKIMVF*DDSKFTSKVGTEAD Trigger: ATCTGCCTCTGTTCCTACTTTGCTGGTGAACTTGCTGTCATCCCAGAAAACCATTATCTTTTCTGGGTGTGCTGTACAGATGTATCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000302681.3 ENST00000374428.1 |
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CDS CCA 72 bp | ATCTGTACAGCACACCCAGAAAAGATAATGGTTTTCTaGGATGACAGCAAGTTCACCAGCAAAGTAGGAACA | + |
Preference number: 6 (lower is better) Translates to: ICTAHPEKIMVF*DDSKFTSKVGT Trigger: TGTTCCTACTTTGCTGGTGAACTTGCTGTCATCCCAGAAAACCATTATCTTTTCTGGGTGTGCTGTACAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000302681.3 ENST00000374428.1 |
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CDS CAA 72 bp | CGTGAATCTAGGATAGTGATCAAAATAAGAGTGCTGTaGCCCAAGAGCGTTGTCAGATACATTACAAGGCTG | + |
Preference number: 6 (lower is better) Translates to: RESRIVIKIRVL*PKSVVRYITRL Trigger: CAGCCTTGTAATGTATCTGACAACGCTCTTGGGCAACAGCACTCTTATTTTGATCACTATCCTAGATTCACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000302681.3 ENST00000374428.1 |
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CDS CAA 90 bp | GTTTTAAGGCGTGAATCTAGGATAGTGATCAAAATAAGAGTGCTGTaGCCCAAGAGCGTTGTCAGATACATTACAAGGCTGAAGACGAAG | + |
Preference number: 6 (lower is better) Translates to: VLRRESRIVIKIRVL*PKSVVRYITRLKTK Trigger: CTTCGTCTTCAGCCTTGTAATGTATCTGACAACGCTCTTGGGCAACAGCACTCTTATTTTGATCACTATCCTAGATTCACGCCTTAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000302681.3 ENST00000374428.1 |
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CDS CAA 90 bp | ATCTCTGGTAAAACCATAGGGACCCAATCAGAGATGTTCGTGTGTTaGATGCAATGTTATTTTGCCCAGCAATTTCTTCATAGCATCTTT | + |
Preference number: 6 (lower is better) Translates to: ISGKTIGTQSEMFVC*MQCYFAQQFLHSIF Trigger: AAAGATGCTATGAAGAAATTGCTGGGCAAAATAACATTGCATCAAACACACGAACATCTCTGATTGGGTCCCTATGGTTTTACCAGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302681.3 |