RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR2B11 (Homo sapiens)

Ensembl gene IDs: ENSG00000177535

Ensembl transcript IDs: ENST00000641149.1, ENST00000641527.1, ENST00000641613.1

Found 406 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCTTGTTAGCACTTCTGAGCAGCACCAACTGGAGACTGGGTTTCTaGATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAAACAC +
Preference number: 1 (lower is better)
Translates to: VLLALLSSTNWRLGF*ILVNYYRLPSCYKH
Trigger: GTGTTTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTCCAGTTGGTGCTGCTCAGAAGTGCTAACAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR TCA 90 bp TCTAACTGTAATGAGTGGAATTTCATCTTTGATAGGATAGGAGATTaGAAATCGTGGAGGGAAAGGTTTGAGAGTATCAGAGCCTGCGCT +
Preference number: 1 (lower is better)
Translates to: SNCNEWNFIFDRIGD*KSWRERFESIRACA
Trigger: AGCGCAGGCTCTGATACTCTCAAACCTTTCCCTCCACGATTTTCAATCTCCTATCCTATCAAAGATGAAATTCCACTCATTACAGTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR GCA 90 bp GAAGACTATTTTTATAAGGGAAACAGTATGAGATTTACATTCTGTTaGAAACTCTGTCTTGTTAGCACTTCTGAGCAGCACCAACTGGAG +
Preference number: 1 (lower is better)
Translates to: EDYFYKGNSMRFTFC*KLCLVSTSEQHQLE
Trigger: CTCCAGTTGGTGCTGCTCAGAAGTGCTAACAAGACAGAGTTTGCAACAGAATGTAAATCTCATACTGTTTCCCTTATAAAAATAGTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR TCA 90 bp TTAGCCATCAAAGTAGCCACACTTTGCTACTCAAAGTGTAGTCTATaGACTGTCGATATAAGGAGCTTGTATAAGAATGTAAAACAATCA +
Preference number: 1 (lower is better)
Translates to: LAIKVATLCYSKCSL*TVDIRSLYKNVKQS
Trigger: TGATTGTTTTACATTCTTATACAAGCTCCTTATATCGACAGTTCATAGACTACACTTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR TCA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGAACTCCTGACCTTGTaGTTCACCCGCCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSELLTL*FTRLGL
Trigger: GAGGCCGAGGCGGGTGAATCACAAGGTCAGGAGTTC...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR CCA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTCTCTGTCGCCCAGTCTaGAGTGCAGAGGCGCGATCT +
Preference number: 2 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSLCRPV*SAEARS
Trigger: AGATCGCGCCTCTGCACTCCAGACTGGGCGACAGAG...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR GCA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGATTTCCTCTGGGTAGATaGCCCGTAGTGGGATTGCTG +
Preference number: 2 (lower is better)
Translates to: REREPLGIRTLKLARLLRFPLGR*PVVGLL
Trigger: CAGCAATCCCACTACGGGGCATCTACCCAGAGGAAA...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR CAA 90 bp TTAGCACTTCTGAGCAGCACCAACTGGAGACTGGGTTTCTGCATCTaGGTGAACTATTACCGACTGCCTTCCTGCTACAAACACTTTGAT +
Preference number: 2 (lower is better)
Translates to: LALLSSTNWRLGFCI*VNYYRLPSCYKHFD
Trigger: ATCAAAGTGTTTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTCCAGTTGGTGCTGCTCAGAAGTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR CCA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAAGCCACTGCGCCCAGATaGTTCCATATTTTTCCAATT +
Preference number: 2 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQATAPR*FHIFPI
Trigger: AATTGGAAAAATATGGAACCATCTGGGCGCAGTGGC...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR CCA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTCTGAGCAGCACCAACTaGAGACTGGGTTTCTGCATC +
Preference number: 2 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSLSSTN*RLGFCI
Trigger: GATGCAGAAACCCAGTCTCCAGTTGGTGCTGCTCAG...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR TCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAACTGGCCAGGTTGCTaGGAATGCCATTATTTCATT +
Preference number: 2 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGNWPGC*ECHYFI
Trigger: AATGAAATAATGGCATTCTCAGCAACCTGGCCAGTT...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR GCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAGAAAGATGCTCTGAGTaGACAATAGACTTGTGCTGT +
Preference number: 2 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGERCSE*TIDLCC
Trigger: ACAGCACAAGTCTATTGTGCACTCAGAGCATCTTTC...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR GCA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAAACAGGCATGAGCCACTaGGCCCAGATGGTTCCATAT +
Preference number: 2 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKTGMSH*AQMVPY
Trigger: ATATGGAACCATCTGGGCGCAGTGGCTCATGCCTGT...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR CCA 90 bp GGAGGGAAAGGTTTGAGAGTATCAGAGCCTGCGCTCCTAACTAGAAGTATTATGTTGCTTCTCTACACATaGACAACTCTTAAACCGCAT +
Preference number: 2 (lower is better)
Translates to: GGKGLRVSEPALLTRSIMLLLYT*TTLKPH
Trigger: ATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA...CATAATACTTCTAGTTAGGAGCGCAGGCTCTGATACTCTCAAACCTTTCCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR GCA 90 bp GCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACACGGAAAGATGCTCTGAGTaGACAATAGACTTGTGCTGT +
Preference number: 2 (lower is better)
Translates to: APRWFHIFPIANCAAINTERCSE*TIDLCC
Trigger: ACAGCACAAGTCTATTGTGCACTCAGAGCATCTTTC...CGTGTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR GCA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTCCTTAAGTGAAAGATaGTCTGAGTGCACAATAGAC +
Preference number: 2 (lower is better)
Translates to: GQLLNRMELLRMEILFPLSLSER*SECTID
Trigger: GTCTATTGTGCACTCAGAGCATCTTTCACTTAAGGA...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR GCA 90 bp TCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATGGAGACTGGGTTTCTaGATCTTGGTGAACTATTAC +
Preference number: 2 (lower is better)
Translates to: STHGQLLNRMELLRMEILWRLGF*ILVNYY
Trigger: GTAATAGTTCACCAAGATGCAGAAACCCAGTCTCCA...TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR CCA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTTGTCGCTATGGGATTTaGGGCATTATAACAGGAAGT +
Preference number: 2 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSCRYGI*GIITGS
Trigger: ACTTCCTGTTATAATGCCCCAAATCCCATAGCGACA...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR GCA 90 bp TCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATCCTTAAGTGAAAGATaGTCTGAGTGCACAATAGAC +
Preference number: 2 (lower is better)
Translates to: STHGQLLNRMELLRMEILSLSER*SECTID
Trigger: GTCTATTGTGCACTCAGAGCATCTTTCACTTAAGGA...TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR CCA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAAGCCACTGCGCCCAGATaGTTCCATATTTTTCCAATT +
Preference number: 2 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKATAPR*FHIFPI
Trigger: AATTGGAAAAATATGGAACCATCTGGGCGCAGTGGC...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR TCA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAAGCTGTGTTCTTTAATTaGTGGAGATGCTACATCTCA +
Preference number: 2 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKAVFFN*WRCYIS
Trigger: TGAGATGTAGCATCTCCATCAATTAAAGAACACAGC...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR CCA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTTGTCGCTATGGGATTTaGGGCATTATAACAGGAAGT +
Preference number: 2 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTCRYGI*GIITGS
Trigger: ACTTCCTGTTATAATGCCCCAAATCCCATAGCGACA...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR TCA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTGCTGTGTTCTTTAATTaGTGGAGATGCTACATCTCA +
Preference number: 2 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTAVFFN*WRCYIS
Trigger: TGAGATGTAGCATCTCCATCAATTAAAGAACACAGC...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR GCA 72 bp GCACTTCTGAGCAGCACCAACTGGAGACTGGGTTTCTaGATCTTGGTGAACTATTACCGACTGCCTTCCTGC +
Preference number: 3 (lower is better)
Translates to: ALLSSTNWRLGF*ILVNYYRLPSC
Trigger: GCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTCCAGTTGGTGCTGCTCAGAAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR TCA 72 bp GCAGCACCAACTGGAGACTGGGTTTCTGCATCTTGGTaGACTATTACCGACTGCCTTCCTGCTACAAACACT +
Preference number: 3 (lower is better)
Translates to: AAPTGDWVSASW*TITDCLPATNT
Trigger: AGTGTTTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTCCAGTTGGTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR CCA 72 bp AACTCTGTCTTGTTAGCACTTCTGAGCAGCACCAACTaGAGACTGGGTTTCTGCATCTTGGTGAACTATTAC +
Preference number: 3 (lower is better)
Translates to: NSVLLALLSSTN*RLGFCILVNYY
Trigger: GTAATAGTTCACCAAGATGCAGAAACCCAGTCTCCAGTTGGTGCTGCTCAGAAGTGCTAACAAGACAGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR CAA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGATTGTCGCTATGGGATTaGGGGCATTATAACAGGAAG +
Preference number: 3 (lower is better)
Translates to: REREPLGIRTLKLARLLRLSLWD*GHYNRK
Trigger: CTTCCTGTTATAATGCCCCAAATCCCATAGCGACAA...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR CAA 90 bp GAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGAATGCCATTATTGTCGCTATGGGATTaGGGGCATTATAACAGGAAG +
Preference number: 3 (lower is better)
Translates to: EPLGIRTLKLARLLRMPLLSLWD*GHYNRK
Trigger: CTTCCTGTTATAATGCCCCAAATCCCATAGCGACAA...TAATGGCATTCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR CAA 90 bp TCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTACTGGGTTTCTGCATCTaGGTGAACTATTACCGACTG +
Preference number: 3 (lower is better)
Translates to: STHGQLLNRMELLRMEILLGFCI*VNYYRL
Trigger: CAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAG...TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR GCA 72 bp CTTTTTCGTATAATGACTTATTTTCCTCTGGGTAGATaGCCCGTAGTGGGATTGCTGGATCAAATGGTAGAT +
Preference number: 3 (lower is better)
Translates to: LFRIMTYFPLGR*PVVGLLDQMVD
Trigger: ATCTACCATTTGATCCAGCAATCCCACTACGGGGCATCTACCCAGAGGAAAATAAGTCATTATACGAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR CAA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGATTTTCCAATTGCAAATaGTGCTGCTATAAACACGCA +
Preference number: 3 (lower is better)
Translates to: REREPLGIRTLKLARLLRFSNCK*CCYKHA
Trigger: TGCGTGTTTATAGCAGCACAATTTGCAATTGGAAAA...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR CAA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGAGAGAAAGAGAACCTTaGGGCATTAGGACATTAAAA +
Preference number: 3 (lower is better)
Translates to: GQLLNRMELLRMEILFPLREREP*GIRTLK
Trigger: TTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR TCA 72 bp AATGAGTGGAATTTCATCTTTGATAGGATAGGAGATTaGAAATCGTGGAGGGAAAGGTTTGAGAGTATCAGA +
Preference number: 3 (lower is better)
Translates to: NEWNFIFDRIGD*KSWRERFESIR
Trigger: TCTGATACTCTCAAACCTTTCCCTCCACGATTTTCAATCTCCTATCCTATCAAAGATGAAATTCCACTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR GCA 72 bp TTTTATAAGGGAAACAGTATGAGATTTACATTCTGTTaGAAACTCTGTCTTGTTAGCACTTCTGAGCAGCAC +
Preference number: 3 (lower is better)
Translates to: FYKGNSMRFTFC*KLCLVSTSEQH
Trigger: GTGCTGCTCAGAAGTGCTAACAAGACAGAGTTTGCAACAGAATGTAAATCTCATACTGTTTCCCTTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR-3UTR CAA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAATTTTCCAATTGCAAATaGTGCTGCTATAAACACGCA +
Preference number: 3 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKFSNCK*CCYKHA
Trigger: TGCGTGTTTATAGCAGCACAATTTGCAATTGGAAAA...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR TCA 72 bp AAAGTAGCCACACTTTGCTACTCAAAGTGTAGTCTATaGACTGTCGATATAAGGAGCTTGTATAAGAATGTA +
Preference number: 3 (lower is better)
Translates to: KVATLCYSKCSL*TVDIRSLYKNV
Trigger: TACATTCTTATACAAGCTCCTTATATCGACAGTTCATAGACTACACTTTGAGTAGCAAAGTGTGGCTACTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR CCA 72 bp AGATGCATCTTGCTTTCAGTTGATAACAGCTTATTTTaGATTTATCCCATCCGAGGAACAGTTCATCTATTA +
Preference number: 3 (lower is better)
Translates to: RCILLSVDNSLF*IYPIRGTVHLL
Trigger: TAATAGATGAACTGTTCCTCGGATGGGATAAATCCAAAATAAGCTGTTATCAACTGAAAGCAAGATGCATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR CCA 72 bp AAATCACAGGAAGAAGATAGCAATCTACTTCATTCCTaGAATTGTCTGAAAAAGTCGTGTAAAATTTGTGGA +
Preference number: 3 (lower is better)
Translates to: KSQEEDSNLLHS*NCLKKSCKICG
Trigger: TCCACAAATTTTACACGACTTTTTCAGACAATTCCAGGAATGAAGTAGATTGCTATCTTCTTCCTGTGATTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAATGGCGGCCAGGACGATaGACTCCGTGCATCCCAGCC +
Preference number: 4 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQWRPGR*TPCIPA
Trigger: GGCTGGGATGCACGGAGTGCATCGTCCTGGCCGCCA...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAAGGCAAAGCTGGACACTaGCCAGCCCTGCCCCTCATG +
Preference number: 4 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQGKAGH*PALPLM
Trigger: CATGAGGGGCAGGGCTGGGCAGTGTCCAGCTTTGCC...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR CCA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAACGTCCCTTGGAGGACTaGATCCTGAGCACTGCCCGG +
Preference number: 4 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQRPLED*ILSTAR
Trigger: CCGGGCAGTGCTCAGGATCCAGTCCTCCAAGGGACG...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAAGAACTCCTGACCTTGTaGTTCACCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQELLTL*FTRLGL
Trigger: GAGGCCGAGGCGGGTGAATCACAAGGTCAGGAGTTC...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGATGGCGGCCAGGACGATaGACTCCGTGCATCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGWRPGR*TPCIPA
Trigger: GGCTGGGATGCACGGAGTGCATCGTCCTGGCCGCCA...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAATCCCGGACTCTCCCTTaGCAGTACGTGAGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQSRTLP*QYVRSV
Trigger: CACCGACCTCACGTACTGCCAAGGGAGAGTCCGGGA...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GGCATTATAACAGGAAGTGAGATGTTTGAAGACAGGGTTTTTGAGCTCTCTGGGCCCGGGATGCCAGGATaGTGGCGACGTTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: GIITGSEMFEDRVFELSGPGMPG*WRRSPT
Trigger: TGTTGGGGAACGTCGCCATCATCCTGGCATCCCGGG...CCCAGAGAGCTCAAAAACCCTGTCTTCAAACATCTCACTTCCTGTTATAATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGAATGGGGCTGTGGAGTTaGGGATCCACCCGGGATGCC +
Preference number: 4 (lower is better)
Translates to: REREPLGIRTLKLARLLRMGLWS*GSTRDA
Trigger: GGCATCCCGGGTGGATCCTCAACTCCACAGCCCCAT...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGAAGTTGCCGAAGCCACTaGGCCAGGCCAGAGCCACGA +
Preference number: 4 (lower is better)
Translates to: REREPLGIRTLKLARLLRSCRSH*ARPEPR
Trigger: TCGTGGCTCTGGCCTGGCTCAGTGGCTTCGGCAACT...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAAGAGTCTGCTGTCCGTTaGAACAGGCTTGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQESAVR*NRLAGE
Trigger: CTCCCCAGCAAGCCTGTTGCAACGGACAGCAGACTC...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAAAGGATCCACCCGGGATaGCAGGATGATGGCGACGTT +
Preference number: 4 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQRIHPG*QDDGDV
Trigger: AACGTCGCCATCATCCTGGCATCCCGGGTGGATCCT...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGACGTCCCTTGGAGGACTaGATCCTGAGCACTGCCCGG +
Preference number: 4 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGRPLED*ILSTAR
Trigger: CCGGGCAGTGCTCAGGATCCAGTCCTCCAAGGGACG...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGAAGAGCCACGAGCTGCTaGCAGAGAGCACGGTGCATG +
Preference number: 4 (lower is better)
Translates to: REREPLGIRTLKLARLLRRATSC*QRARCM
Trigger: CATGCACCGTGCTCTCTGTCAGCAGCTCGTGGCTCT...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAACATAGGAGAGAAGGATaGGAGCCAGGGGCACCAACA +
Preference number: 4 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQHRREG*EPGAPT
Trigger: TGTTGGTGCCCCTGGCTCTCATCCTTCTCTCCTATG...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAAGTGGAGGGAAAGGTTTaGGAGTATCAGAGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQVEGKV*EYQSLR
Trigger: GCGCAGGCTCTGATACTCTCAAACCTTTCCCTCCAC...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGGACACTGCCCAGCCCTaGCCCTCATGCCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: GQLLNRMELLRMEILFPLDTAQP*PSCPGS
Trigger: AGATCCAGGGCATGAGGGGCAGGGCTGGGCAGTGTC...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR CCA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGACTCTGTCGCCCAGTCTaGAGTGCAGAGGCGCGATCT +
Preference number: 4 (lower is better)
Translates to: REREPLGIRTLKLARLLRLCRPV*SAEARS
Trigger: AGATCGCGCCTCTGCACTCCAGACTGGGCGACAGAG...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAATCCCTTCAGTCACCGTaGTGCCAAGTACTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQSLQSP*CQVLRF
Trigger: GAACCTCAGTACTTGGCATCACGGTGACTGAAGGGA...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR TCA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGATGGGTTGCCACCTGCTaGTTCGTGGGTCCTTTCGAC +
Preference number: 4 (lower is better)
Translates to: REREPLGIRTLKLARLLRWVATC*FVGPFD
Trigger: GTCGAAAGGACCCACGAATCAGCAGGTGGCAACCCA...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp TCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTACCCGGGATGCCAGGATaGTGGCGACGTTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: STHGQLLNRMELLRMEILPGMPG*WRRSPT
Trigger: TGTTGGGGAACGTCGCCATCATCCTGGCATCCCGGG...TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp ACTGCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACATGGGGCTGTGGAGTTaGGGATCCACCCGGGATGCC +
Preference number: 4 (lower is better)
Translates to: TAPRWFHIFPIANCAAINMGLWS*GSTRDA
Trigger: GGCATCCCGGGTGGATCCTCAACTCCACAGCCCCAT...GTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp ACTGCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACAGTTGCCGAAGCCACTaGGCCAGGCCAGAGCCACGA +
Preference number: 4 (lower is better)
Translates to: TAPRWFHIFPIANCAAINSCRSH*ARPEPR
Trigger: TCGTGGCTCTGGCCTGGCTCAGTGGCTTCGGCAACT...GTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GGAGGGAAAGGTTTGAGAGTATCAGAGCCTGCGCTCCTAACTAGAAGTATTATGTCAGGCAACACACCTTaGCCGTGTCACGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: GGKGLRVSEPALLTRSIMSGNTP*PCHALC
Trigger: ACAGAGAGCGTGACACGGGCAAGGTGTGTTGCCTGA...CATAATACTTCTAGTTAGGAGCGCAGGCTCTGATACTCTCAAACCTTTCCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAGGATCCACCCGGGATaGCAGGATGATGGCGACGTT +
Preference number: 4 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGRIHPG*QDDGDV
Trigger: AACGTCGCCATCATCCTGGCATCCCGGGTGGATCCT...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAACAGCCAGTGGAAGACTaGATATTGCACAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQQPVED*ILHSAA
Trigger: GGCTGCACTGTGCAATATGCAGTCTTCCACTGGCTG...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAATTTCCTCTGGGTAGATaGCCCGTAGTGGGATTGCTG +
Preference number: 4 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQFPLGR*PVVGLL
Trigger: CAGCAATCCCACTACGGGGCATCTACCCAGAGGAAA...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTTCACCACTGCCGTCCTaGGCAGAAACGCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSSPLPS*AETPTR
Trigger: CCTGGTGGGCGTTTCTGCCCAGGACGGCAGTGGTGA...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR CCA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGATCTCAATGGCAAAGCTaGACACTGCCCAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: REREPLGIRTLKLARLLRSQWQS*TLPSPA
Trigger: GGCAGGGCTGGGCAGTGTCCAGCTTTGCCATTGAGA...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
3UTR CAA 72 bp CTGAGCAGCACCAACTGGAGACTGGGTTTCTGCATCTaGGTGAACTATTACCGACTGCCTTCCTGCTACAAA +
Preference number: 4 (lower is better)
Translates to: LSSTNWRLGFCI*VNYYRLPSCYK
Trigger: TTTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTCCAGTTGGTGCTGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTCCCTTGGCAGTACGTaGGGTCGGTGGAACTGCCTT +
Preference number: 4 (lower is better)
Translates to: GQLLNRMELLRMEILFPLSLGST*GRWNCL
Trigger: AAGGCAGTTCCACCGACCTCACGTACTGCCAAGGGA...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GGCATTATAACAGGAAGTGAGATGTTTGAAGACAGGGTTTTTGAGCTCTCTGGGCTCATGCCCTGGATCTaGTGCCCTTCTGTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: GIITGSEMFEDRVFELSGLMPWI*CPSVQV
Trigger: CACCTGAACAGAAGGGCATCAGATCCAGGGCATGAG...CCCAGAGAGCTCAAAAACCCTGTCTTCAAACATCTCACTTCCTGTTATAATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR TCA 90 bp GAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGAATGCCATTAAGCAGAAGGGCTTTGTaGGCAGCTGGGGGCTGTATT +
Preference number: 4 (lower is better)
Translates to: EPLGIRTLKLARLLRMPLSRRAL*AAGGCI
Trigger: AATACAGCCCCCAGCTGCTCACAAAGCCCTTCTGCT...TAATGGCATTCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGAGAGAGCACGGTGCATaGGAACGGCATAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GQLLNRMELLRMEILFPLREHGA*ERHSAG
Trigger: CCCTGCACTATGCCGTTCTCATGCACCGTGCTCTCT...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GGATTTATCCCATCCGAGGAACAGTTCATCTATTATACTTCACAGAGCATTAAGCAGCACACGACAGCTTaGTCACGGCCGGCACCTCAC +
Preference number: 4 (lower is better)
Translates to: GFIPSEEQFIYYTSQSIKQHTTA*SRPAPH
Trigger: GTGAGGTGCCGGCCGTGATCAAGCTGTCGTGTGCTG...CTTAATGCTCTGTGAAGTATAATAGATGAACTGTTCCTCGGATGGGATAAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGATCAGGCAACACACCTTaGCCGTGTCACGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGSGNTP*PCHALC
Trigger: ACAGAGAGCGTGACACGGGCAAGGTGTGTTGCCTGA...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGATGCTACCTGCCTCTCTaGAGGCAGTTTCAACCCCTC +
Preference number: 4 (lower is better)
Translates to: REREPLGIRTLKLARLLRCYLPL*RQFQPL
Trigger: GAGGGGTTGAAACTGCCTGCAGAGAGGCAGGTAGCA...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR GCA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAATTGGAACTTGCTACCTaGCTCTCTGCAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQLELAT*LSAGSF
Trigger: GAAACTGCCTGCAGAGAGGCAGGTAGCAAGTTCCAA...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR GCA 90 bp GGCATTATAACAGGAAGTGAGATGTTTGAAGACAGGGTTTTTGAGCTCTCTGGGTCACTGGCTCACGCTTaGATCCAGCTCCCGGATTCA +
Preference number: 4 (lower is better)
Translates to: GIITGSEMFEDRVFELSGSLAHA*IQLPDS
Trigger: TGAATCCGGGAGCTGGATGCAAGCGTGAGCCAGTGA...CCCAGAGAGCTCAAAAACCCTGTCTTCAAACATCTCACTTCCTGTTATAATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAACAGCCTCTGTGTCTTTaGTCTCCTTCCTACTCAGTG +
Preference number: 4 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQQPLCL*SPSYSV
Trigger: CACTGAGTAGGAAGGAGAGCAAAGACACAGAGGCTG...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACACGGGACGATGCACTCCGTaGATCCCAGCCAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: APRWFHIFPIANCAAINTGRCTP*IPASGR
Trigger: TCTTCCACTGGCTGGGATGCACGGAGTGCATCGTCC...CGTGTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACACGACCGTCAGGACCACCTaGACGAAGGAGTTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: APRWFHIFPIANCAAINTTVRTT*TKELPK
Trigger: CTTCGGCAACTCCTTCGTGCAGGTGGTCCTGACGGT...CGTGTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGCCGCAGAATGGCAATTaGACCGTCAGGACCACCTGC +
Preference number: 4 (lower is better)
Translates to: GQLLNRMELLRMEILFPLPQNGN*TVRTTC
Trigger: GCAGGTGGTCCTGACGGTGCAATTGCCATTCTGCGG...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GGCATTATAACAGGAAGTGAGATGTTTGAAGACAGGGTTTTTGAGCTCTCTGGGTTGCAACAGGCTTGCTaGGGAGACTCAGGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GIITGSEMFEDRVFELSGLQQAC*GDSGFP
Trigger: GGGAAACCCTGAGTCTCCCCAGCAAGCCTGTTGCAA...CCCAGAGAGCTCAAAAACCCTGTCTTCAAACATCTCACTTCCTGTTATAATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGACGACGTTCCCCAACATaGCCAGCACATAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGRRSPT*PAHRTA
Trigger: TGCTGTCCTATGTGCTGGCCATGTTGGGGAACGTCG...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGACGACGTTCCCCAACATaGCCAGCACATAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: REREPLGIRTLKLARLLRRRSPT*PAHRTA
Trigger: TGCTGTCCTATGTGCTGGCCATGTTGGGGAACGTCG...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGAGCTCTTGGGAGTAGCTaGAAGGGGGCTGCAGATACA +
Preference number: 4 (lower is better)
Translates to: REREPLGIRTLKLARLLRALGSS*KGAADT
Trigger: TGTATCTGCAGCCCCCTTCCAGCTACTCCCAAGAGC...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTTCCCTTGGCAGTACGTaGGGTCGGTGGAACTGCCTT +
Preference number: 4 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSSLGST*GRWNCL
Trigger: AAGGCAGTTCCACCGACCTCACGTACTGCCAAGGGA...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAACAGCACATTTCCTCTaGTGGGCTGCTGGGACCTTA +
Preference number: 4 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGTAHFL*WAAGTL
Trigger: TAAGGTCCCAGCAGCCCATCAGAGGAAATGTGCTGT...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp TCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATGGGTTGCCACCTGCTaGTTCGTGGGTCCTTTCGAC +
Preference number: 4 (lower is better)
Translates to: STHGQLLNRMELLRMEILWVATC*FVGPFD
Trigger: GTCGAAAGGACCCACGAATCAGCAGGTGGCAACCCA...TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAACAGCACACGACAGCTTaGTCACGGCCGGCACCTCAC +
Preference number: 4 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKQHTTA*SRPAPH
Trigger: GTGAGGTGCCGGCCGTGATCAAGCTGTCGTGTGCTG...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACACGCATAGGAGAGAAGGATaGGAGCCAGGGGCACCAACA +
Preference number: 4 (lower is better)
Translates to: APRWFHIFPIANCAAINTHRREG*EPGAPT
Trigger: TGTTGGTGCCCCTGGCTCTCATCCTTCTCTCCTATG...CGTGTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GGATTTATCCCATCCGAGGAACAGTTCATCTATTATACTTCACAGAGCATTAAGGAACTCCTGACCTTGTaGTTCACCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GFIPSEEQFIYYTSQSIKELLTL*FTRLGL
Trigger: GAGGCCGAGGCGGGTGAATCACAAGGTCAGGAGTTC...CTTAATGCTCTGTGAAGTATAATAGATGAACTGTTCCTCGGATGGGATAAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GGAGGGAAAGGTTTGAGAGTATCAGAGCCTGCGCTCCTAACTAGAAGTATTATGAGTCTAGAAGGAGTCTaGTGTCCGTTGCAACAGGCT +
Preference number: 4 (lower is better)
Translates to: GGKGLRVSEPALLTRSIMSLEGV*CPLQQA
Trigger: AGCCTGTTGCAACGGACAGCAGACTCCTTCTAGACT...CATAATACTTCTAGTTAGGAGCGCAGGCTCTGATACTCTCAAACCTTTCCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAATTTCCTCTGATGGGCTaGTGGGACCTTACCATTTAC +
Preference number: 4 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQFPLMG*WDLTIY
Trigger: GTAAATGGTAAGGTCCCAGCAGCCCATCAGAGGAAA...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp TCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTACTGTATCCTCACCACTaGCGTCCTGGGCAGAAACGC +
Preference number: 4 (lower is better)
Translates to: STHGQLLNRMELLRMEILLYPHH*RPGQKR
Trigger: GCGTTTCTGCCCAGGACGGCAGTGGTGAGGATACAG...TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR GCA 90 bp GCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACACGAGGAAGCAACTGGGTTaGCACCTGCTGATTCGTGGG +
Preference number: 4 (lower is better)
Translates to: APRWFHIFPIANCAAINTRKQLG*HLLIRG
Trigger: CCCACGAATCAGCAGGTGGCAACCCAGTTGCTTCCT...CGTGTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACACGTCACTGGCTCACGCTTaGATCCAGCTCCCGGATTCA +
Preference number: 4 (lower is better)
Translates to: APRWFHIFPIANCAAINTSLAHA*IQLPDS
Trigger: TGAATCCGGGAGCTGGATGCAAGCGTGAGCCAGTGA...CGTGTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp TCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTAGGACGATGCACTCCGTaGATCCCAGCCAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: STHGQLLNRMELLRMEILGRCTP*IPASGR
Trigger: TCTTCCACTGGCTGGGATGCACGGAGTGCATCGTCC...TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTACCGTCAGGACCACCTaGACGAAGGAGTTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSTVRTT*TKELPK
Trigger: CTTCGGCAACTCCTTCGTGCAGGTGGTCCTGACGGT...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GGCATTATAACAGGAAGTGAGATGTTTGAAGACAGGGTTTTTGAGCTCTCTGGGAAGTTGTTCAGCACCTaGCGCCCGCAGAATGGCAAT +
Preference number: 4 (lower is better)
Translates to: GIITGSEMFEDRVFELSGKLFST*RPQNGN
Trigger: ATTGCCATTCTGCGGGCGGCAGGTGCTGAACAACTT...CCCAGAGAGCTCAAAAACCCTGTCTTCAAACATCTCACTTCCTGTTATAATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACACGTTGCAACAGGCTTGCTaGGGAGACTCAGGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: APRWFHIFPIANCAAINTLQQAC*GDSGFP
Trigger: GGGAAACCCTGAGTCTCCCCAGCAAGCCTGTTGCAA...CGTGTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGACCTCTGATGGGCTGCTaGGACCTTACCATTTACTGG +
Preference number: 4 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGPLMGC*DLTIYW
Trigger: CCAGTAAATGGTAAGGTCCCAGCAGCCCATCAGAGG...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGAATGCCATTACACACGGTTTCTCAATaGCAAAGCTGGACACTGCCC +
Preference number: 4 (lower is better)
Translates to: EPLGIRTLKLARLLRMPLHTVSQ*QSWTLP
Trigger: GGGCAGTGTCCAGCTTTGCCATTGAGAAACCGTGTG...TAATGGCATTCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR CCA 90 bp GCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACACGCCACCTGCTGATTCGTaGGTCCTTTCGACTGCACCA +
Preference number: 4 (lower is better)
Translates to: APRWFHIFPIANCAAINTPPADS*VLSTAP
Trigger: TGGTGCAGTCGAAAGGACCCACGAATCAGCAGGTGG...CGTGTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAGGTCCTGTGAGTCTCTaGAGTGGAAGAGCCAAGGTA +
Preference number: 4 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGGPVSL*SGRAKV
Trigger: TACCTTGGCTCTTCCACTCCAGAGACTCACAGGACC...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GGCATTATAACAGGAAGTGAGATGTTTGAAGACAGGGTTTTTGAGCTCTCTGGGTTCTCCTTACCTCTGTaGAGACGCTGGGATGCGGAA +
Preference number: 4 (lower is better)
Translates to: GIITGSEMFEDRVFELSGFSLPL*RRWDAE
Trigger: TTCCGCATCCCAGCGTCTCCACAGAGGTAAGGAGAA...CCCAGAGAGCTCAAAAACCCTGTCTTCAAACATCTCACTTCCTGTTATAATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGAGAGACGATCATCAGGTaGGAGGAACACGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: REREPLGIRTLKLARLLRETIIR*EEHVPK
Trigger: CTTTGGGACGTGTTCCTCCCACCTGATGATCGTCTC...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGAGAGCCTCCAGATCCTaGCCAGAAGTCTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GQLLNRMELLRMEILFPLRASRS*PEVSSE
Trigger: CTCTGAGGAGACTTCTGGCCAGGATCTGGAGGCTCT...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGACTGAGCAGCACCAACTaGAGACTGGGTTTCTGCATC +
Preference number: 4 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGLSSTN*RLGFCI
Trigger: GATGCAGAAACCCAGTCTCCAGTTGGTGCTGCTCAG...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTTGCAGCCTCCATAGCTaGTGGTCTTCTGGGAACTGC +
Preference number: 4 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSCSLHS*WSSGNC
Trigger: GCAGTTCCCAGAAGACCATCAGCTATGGAGGCTGCA...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp TCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTAGTGGAGGGAAAGGTTTaGGAGTATCAGAGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: STHGQLLNRMELLRMEILVEGKV*EYQSLR
Trigger: GCGCAGGCTCTGATACTCTCAAACCTTTCCCTCCAC...TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GGCATTATAACAGGAAGTGAGATGTTTGAAGACAGGGTTTTTGAGCTCTCTGGGACACCTTCCAGTTCCTaGTGGGGATGTTATGCTGCT +
Preference number: 4 (lower is better)
Translates to: GIITGSEMFEDRVFELSGTPSSS*WGCYAA
Trigger: AGCAGCATAACATCCCCATCAGGAACTGGAAGGTGT...CCCAGAGAGCTCAAAAACCCTGTCTTCAAACATCTCACTTCCTGTTATAATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641527.1
CDS-3UTR GCA 90 bp TCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTACCGTTGCAACAGGCTTaGTGGGGAGACTCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: STHGQLLNRMELLRMEILPLQQA*WGDSGF
Trigger: AAACCCTGAGTCTCCCCAGCAAGCCTGTTGCAACGG...TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GGAGGGAAAGGTTTGAGAGTATCAGAGCCTGCGCTCCTAACTAGAAGTATTATGACAATGTTGCATCGTTaGAGGCACGCACTGTCTGTA +
Preference number: 4 (lower is better)
Translates to: GGKGLRVSEPALLTRSIMTMLHR*RHALSV
Trigger: TACAGACAGTGCGTGCCTGCAACGATGCAACATTGT...CATAATACTTCTAGTTAGGAGCGCAGGCTCTGATACTCTCAAACCTTTCCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR GCA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGGTGGGTCCTTTCGACTaGACCATTGGCTTCTCACCT +
Preference number: 4 (lower is better)
Translates to: GQLLNRMELLRMEILFPLVGPFD*TIGFSP
Trigger: AGGTGAGAAGCCAATGGTGCAGTCGAAAGGACCCAC...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGACCTGCACAATTTCTTTaGCGAGCAGCTGTCACCTCT +
Preference number: 4 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGPAQFL*RAAVTS
Trigger: AGAGGTGACAGCTGCTCGGCAAAGAAATTGTGCAGG...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACACGCTGGATCCTGAGCACTaGCCGGGCAATAAAGCCATA +
Preference number: 4 (lower is better)
Translates to: APRWFHIFPIANCAAINTLDPEH*PGNKAI
Trigger: TATGGCTTTATTGCCCGGGCAGTGCTCAGGATCCAG...CGTGTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGACAGGCATGAGCCACTaGGCCCAGATGGTTCCATAT +
Preference number: 4 (lower is better)
Translates to: GQLLNRMELLRMEILFPLTGMSH*AQMVPY
Trigger: ATATGGAACCATCTGGGCGCAGTGGCTCATGCCTGT...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp TCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTACACCAGGACCCCTCTTaGAACTTGCTACCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: STHGQLLNRMELLRMEILHQDPS*NLLPAS
Trigger: AGAGGCAGGTAGCAAGTTCCAAGAGGGGTCCTGGTG...TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR CCA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGACAGCCTTGCTTCCCTaGATGGACACAGTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: GQLLNRMELLRMEILFPLTALLP*MDTVVP
Trigger: GGGAACTACTGTGTCCATCCAGGGAAGCAAGGCTGT...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR CCA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAAGAGAAAGGTAGCCCCTaGAATTGTCTACGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQEKGSP*NCLRKD
Trigger: ATCTTTCCGTAGACAATTCCAGGGGCTACCTTTCTC...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACACGTTCTCCTTACCTCTGTaGAGACGCTGGGATGCGGAA +
Preference number: 4 (lower is better)
Translates to: APRWFHIFPIANCAAINTFSLPL*RRWDAE
Trigger: TTCCGCATCCCAGCGTCTCCACAGAGGTAAGGAGAA...CGTGTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGCCAGCACAGCCAGTATaGTGTCATTCACAGCGGTGT +
Preference number: 4 (lower is better)
Translates to: GQLLNRMELLRMEILFPLPAQPV*CHSQRC
Trigger: ACACCGCTGTGAATGACACCATACTGGCTGTGCTGG...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGGAGACGATCATCAGGTaGGAGGAACACGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: GQLLNRMELLRMEILFPLETIIR*EEHVPK
Trigger: CTTTGGGACGTGTTCCTCCCACCTGATGATCGTCTC...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGCTCTTGGGAGTAGCTaGAAGGGGGCTGCAGATACA +
Preference number: 4 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSALGSS*KGAADT
Trigger: TGTATCTGCAGCCCCCTTCCAGCTACTCCCAAGAGC...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAACTCTGTCGCCCAGTCTaGAGTGCAGAGGCGCGATCT +
Preference number: 4 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKLCRPV*SAEARS
Trigger: AGATCGCGCCTCTGCACTCCAGACTGGGCGACAGAG...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGAATGCCATTATGGAACCCAACCCTCTaGGCAAGTCTGAGAGATTAT +
Preference number: 4 (lower is better)
Translates to: EPLGIRTLKLARLLRMPLWNPTL*ASLRDY
Trigger: ATAATCTCTCAGACTTGCTCAGAGGGTTGGGTTCCA...TAATGGCATTCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GGCATTATAACAGGAAGTGAGATGTTTGAAGACAGGGTTTTTGAGCTCTCTGGGAGTCGCGTAAACGACTaGGACAAAAGAAGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GIITGSEMFEDRVFELSGSRVND*DKRSSW
Trigger: CCAGGAACTTCTTTTGTCTCAGTCGTTTACGCGACT...CCCAGAGAGCTCAAAAACCCTGTCTTCAAACATCTCACTTCCTGTTATAATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR TCA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGACAGACCATGGAATTTTaGGCACAGGGAGAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: REREPLGIRTLKLARLLRQTMEF*AQGESS
Trigger: AGAGCTTTCTCCCTGTGCTCAAAATTCCATGGTCTG...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTAGAGCCACGAGCTGCTaGCAGAGAGCACGGTGCATG +
Preference number: 4 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTRATSC*QRARCM
Trigger: CATGCACCGTGCTCTCTGTCAGCAGCTCGTGGCTCT...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GGATTTATCCCATCCGAGGAACAGTTCATCTATTATACTTCACAGAGCATTAAGCCGTTGCAACAGGCTTaGTGGGGAGACTCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: GFIPSEEQFIYYTSQSIKPLQQA*WGDSGF
Trigger: AAACCCTGAGTCTCCCCAGCAAGCCTGTTGCAACGG...CTTAATGCTCTGTGAAGTATAATAGATGAACTGTTCCTCGGATGGGATAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACACGAGTCTAGAAGGAGTCTaGTGTCCGTTGCAACAGGCT +
Preference number: 4 (lower is better)
Translates to: APRWFHIFPIANCAAINTSLEGV*CPLQQA
Trigger: AGCCTGTTGCAACGGACAGCAGACTCCTTCTAGACT...CGTGTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAACTACCCAAGTACAGGTaGCCCCTCAAGGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKLPKYR*PLKAQP
Trigger: AGGCTGTGCCTTGAGGGGGCACCTGTACTTGGGTAG...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR CCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAGGTACCTTGACATGGTaGAGGTTACTTCCGAGGATA +
Preference number: 4 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGGTLTW*RLLPRI
Trigger: TATCCTCGGAAGTAACCTCCACCATGTCAAGGTACC...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGGAGAAAGCTCTTGATTaGCGTGAGAAAGGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: GQLLNRMELLRMEILFPLEKALD*REKGSP
Trigger: GGGGCTACCTTTCTCACGCCAATCAAGAGCTTTCTC...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp ACTGCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACGGTCCTGTGAGTCTCTaGAGTGGAAGAGCCAAGGTA +
Preference number: 4 (lower is better)
Translates to: TAPRWFHIFPIANCAAINGPVSL*SGRAKV
Trigger: TACCTTGGCTCTTCCACTCCAGAGACTCACAGGACC...GTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAACCTCTGTGGAGACGCTaGGATGCGGAAGGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKPLWRR*DAEGSE
Trigger: TTCTGACCCTTCCGCATCCCAGCGTCTCCACAGAGG...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAACCTCTGTGGAGACGCTaGGATGCGGAAGGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKPLWRR*DAEGSE
Trigger: TTCTGACCCTTCCGCATCCCAGCGTCTCCACAGAGG...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GGATTTATCCCATCCGAGGAACAGTTCATCTATTATACTTCACAGAGCATTAAGAGAGCCTCCAGATCCTaGCCAGAAGTCTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GFIPSEEQFIYYTSQSIKRASRS*PEVSSE
Trigger: CTCTGAGGAGACTTCTGGCCAGGATCTGGAGGCTCT...CTTAATGCTCTGTGAAGTATAATAGATGAACTGTTCCTCGGATGGGATAAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTACCCACACAATGCTGTaGTCCCACCACAATGTTGCA +
Preference number: 4 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSTHTML*SHHNVA
Trigger: TGCAACATTGTGGTGGGATCACAGCATTGTGTGGGT...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR TCA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTTGTCAGTTCCTCACTaGCCTCTAACCCCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: GQLLNRMELLRMEILFPLLSVPH*PLTPFL
Trigger: CAAAAAGGGGGTTAGAGGTCAGTGAGGAACTGACAA...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR TCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGACCCCAGTTGATGTTCTaGAGAACTCTACTGTTACTG +
Preference number: 4 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGPQLMF*RTLLLL
Trigger: CAGTAACAGTAGAGTTCTTCAGAACATCAACTGGGG...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR TCA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAATGCAGCCTCCATAGCTaGTGGTCTTCTGGGAACTGC +
Preference number: 4 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKCSLHS*WSSGNC
Trigger: GCAGTTCCCAGAAGACCATCAGCTATGGAGGCTGCA...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTAGAGAGCACGGTGCATaGGAACGGCATAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTREHGA*ERHSAG
Trigger: CCCTGCACTATGCCGTTCTCATGCACCGTGCTCTCT...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GGAGGGAAAGGTTTGAGAGTATCAGAGCCTGCGCTCCTAACTAGAAGTATTATGAACTGGCCAGGTTGCTaGGAATGCCATTATTTCATT +
Preference number: 4 (lower is better)
Translates to: GGKGLRVSEPALLTRSIMNWPGC*ECHYFI
Trigger: AATGAAATAATGGCATTCTCAGCAACCTGGCCAGTT...CATAATACTTCTAGTTAGGAGCGCAGGCTCTGATACTCTCAAACCTTTCCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGAGATAGGATAGGAGATTaGAAATCGTGGAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: REREPLGIRTLKLARLLRDRIGD*KSWRER
Trigger: CCTTTCCCTCCACGATTTTCAATCTCCTATCCTATC...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGAATGCCATTAGGGATGTTATGCTGCTaGTTGTATCATGTTCACGCT +
Preference number: 4 (lower is better)
Translates to: EPLGIRTLKLARLLRMPLGMLCC*LYHVHA
Trigger: AGCGTGAACATGATACAATCAGCAGCATAACATCCC...TAATGGCATTCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641527.1
CDS-3UTR GCA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAAACCCCTCTTGGAACTTaGTACCTGCCTCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKTPLGT*YLPLCR
Trigger: CCTGCAGAGAGGCAGGTAGCAAGTTCCAAGAGGGGT...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR GCA 90 bp ACTGCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACGCTCAGCTTACATGTTaGAACAGGTGTTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TAPRWFHIFPIANCAAINAQLTC*NRCSLL
Trigger: CAGCAGGGAACACCTGTTGCAACATGTAAGCTGAGC...GTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR GCA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAAAGGAAGCAACTGGGTTaGCACCTGCTGATTCGTGGG +
Preference number: 4 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKRKQLG*HLLIRG
Trigger: CCCACGAATCAGCAGGTGGCAACCCAGTTGCTTCCT...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp TCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTACACTTTCCTCCCTCTTaGATCCACTCTTCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: STHGQLLNRMELLRMEILHFPPS*IHSSFP
Trigger: GGGAAAGGAAGAGTGGATGCAAGAGGGAGGAAAGTG...TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTCCGCAGAATGGCAATTaGACCGTCAGGACCACCTGC +
Preference number: 4 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTPQNGN*TVRTTC
Trigger: GCAGGTGGTCCTGACGGTGCAATTGCCATTCTGCGG...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GGATTTATCCCATCCGAGGAACAGTTCATCTATTATACTTCACAGAGCATTAAGCTGGATCCTGAGCACTaGCCGGGCAATAAAGCCATA +
Preference number: 4 (lower is better)
Translates to: GFIPSEEQFIYYTSQSIKLDPEH*PGNKAI
Trigger: TATGGCTTTATTGCCCGGGCAGTGCTCAGGATCCAG...CTTAATGCTCTGTGAAGTATAATAGATGAACTGTTCCTCGGATGGGATAAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GGAGGGAAAGGTTTGAGAGTATCAGAGCCTGCGCTCCTAACTAGAAGTATTATGTGGAGACTGGGTTTCTaGATCTTGGTGAACTATTAC +
Preference number: 4 (lower is better)
Translates to: GGKGLRVSEPALLTRSIMWRLGF*ILVNYY
Trigger: GTAATAGTTCACCAAGATGCAGAAACCCAGTCTCCA...CATAATACTTCTAGTTAGGAGCGCAGGCTCTGATACTCTCAAACCTTTCCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACACGATAGGTACCTTGACATaGTGGAGGTTACTTCCGAGG +
Preference number: 4 (lower is better)
Translates to: APRWFHIFPIANCAAINTIGTLT*WRLLPR
Trigger: CCTCGGAAGTAACCTCCACCATGTCAAGGTACCTAT...CGTGTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GGCATTATAACAGGAAGTGAGATGTTTGAAGACAGGGTTTTTGAGCTCTCTGGGTTTCGACTGCACCATTaGCTTCTCACCTCCTACAAT +
Preference number: 4 (lower is better)
Translates to: GIITGSEMFEDRVFELSGFRLHH*LLTSYN
Trigger: ATTGTAGGAGGTGAGAAGCCAATGGTGCAGTCGAAA...CCCAGAGAGCTCAAAAACCCTGTCTTCAAACATCTCACTTCCTGTTATAATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGAATGCCATTATGTTGCGGCATTTTCTaGCACTTGTGGCAAATTGAG +
Preference number: 4 (lower is better)
Translates to: EPLGIRTLKLARLLRMPLCCGIF*HLWQIE
Trigger: CTCAATTTGCCACAAGTGCCAGAAAATGCCGCAACA...TAATGGCATTCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTGCATCCCAGCCAGTaGAAGACTGCATATTGCACA +
Preference number: 4 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSVHPSQ*KTAYCT
Trigger: TGTGCAATATGCAGTCTTCCACTGGCTGGGATGCAC...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GGATTTATCCCATCCGAGGAACAGTTCATCTATTATACTTCACAGAGCATTAAGCCAGCACAGCCAGTATaGTGTCATTCACAGCGGTGT +
Preference number: 4 (lower is better)
Translates to: GFIPSEEQFIYYTSQSIKPAQPV*CHSQRC
Trigger: ACACCGCTGTGAATGACACCATACTGGCTGTGCTGG...CTTAATGCTCTGTGAAGTATAATAGATGAACTGTTCCTCGGATGGGATAAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACACGCCCTCTGAGCAAGTCTaGGAGATTATTCTCAGTCTA +
Preference number: 4 (lower is better)
Translates to: APRWFHIFPIANCAAINTPSEQV*EIILSL
Trigger: TAGACTGAGAATAATCTCTCAGACTTGCTCAGAGGG...CGTGTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAAACAGCACATTTCCTCTaGTGGGCTGCTGGGACCTTA +
Preference number: 4 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKTAHFL*WAAGTL
Trigger: TAAGGTCCCAGCAGCCCATCAGAGGAAATGTGCTGT...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GGCATTATAACAGGAAGTGAGATGTTTGAAGACAGGGTTTTTGAGCTCTCTGGGTCAAGAGTTACCTGCTaGTTGTATCATGTTCACGCT +
Preference number: 4 (lower is better)
Translates to: GIITGSEMFEDRVFELSGSRVTC*LYHVHA
Trigger: AGCGTGAACATGATACAATCAGCAGGTAACTCTTGA...CCCAGAGAGCTCAAAAACCCTGTCTTCAAACATCTCACTTCCTGTTATAATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR TCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGACGTGATGCCAAGTACTaGGGTTCTTTCTATTCATGT +
Preference number: 4 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGRDAKY*GSFYSC
Trigger: ACATGAATAGAAAGAACCTCAGTACTTGGCATCACG...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR TCA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAATGCCTGTCAAAACAGTaGGCTGTGGCCGAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKCLSKQ*AVAEQS
Trigger: ACTTTGCTCGGCCACAGCTCACTGTTTTGACAGGCA...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR TCA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAACCCTGCTGCCCCAGTTaGTGTTCTGAAGAACTCTAC +
Preference number: 4 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKPCCPS*CSEELY
Trigger: GTAGAGTTCTTCAGAACATCAACTGGGGCAGCAGGG...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR TCA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTAGCAGAAGGGCTTTGTaGGCAGCTGGGGGCTGTATT +
Preference number: 4 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTSRRAL*AAGGCI
Trigger: AATACAGCCCCCAGCTGCTCACAAAGCCCTTCTGCT...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGCACCGTCAGAGTGTTTaGTTTCTCTCTACATCCACA +
Preference number: 4 (lower is better)
Translates to: GQLLNRMELLRMEILFPLHRQSV*FLSTST
Trigger: TGTGGATGTAGAGAGAAATCAAACACTCTGACGGTG...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACACGCACCGTCAGAGTGTTTaGTTTCTCTCTACATCCACA +
Preference number: 4 (lower is better)
Translates to: APRWFHIFPIANCAAINTHRQSV*FLSTST
Trigger: TGTGGATGTAGAGAGAAATCAAACACTCTGACGGTG...CGTGTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GGAGGGAAAGGTTTGAGAGTATCAGAGCCTGCGCTCCTAACTAGAAGTATTATGTCAAAGTGTAGTCTATaGACTGTCGATATAAGGAGC +
Preference number: 4 (lower is better)
Translates to: GGKGLRVSEPALLTRSIMSKCSL*TVDIRS
Trigger: GCTCCTTATATCGACAGTTCATAGACTACACTTTGA...CATAATACTTCTAGTTAGGAGCGCAGGCTCTGATACTCTCAAACCTTTCCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp ACTGCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACTTTCCTCTGATGGGCTaGTGGGACCTTACCATTTAC +
Preference number: 4 (lower is better)
Translates to: TAPRWFHIFPIANCAAINFPLMG*WDLTIY
Trigger: GTAAATGGTAAGGTCCCAGCAGCCCATCAGAGGAAA...GTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp ACTGCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACTCAACACCCACACAATaGTGTGATCCCACCACAATG +
Preference number: 4 (lower is better)
Translates to: TAPRWFHIFPIANCAAINSTPTQ*CDPTTM
Trigger: CATTGTGGTGGGATCACAGCATTGTGTGGGTGTTGA...GTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR GCA 90 bp GGAGGGAAAGGTTTGAGAGTATCAGAGCCTGCGCTCCTAACTAGAAGTATTATGAAACTAACGGAGATCTaGTCAGCTTACATGTTGCAA +
Preference number: 4 (lower is better)
Translates to: GGKGLRVSEPALLTRSIMKLTEI*SAYMLQ
Trigger: TTGCAACATGTAAGCTGAGCAGATCTCCGTTAGTTT...CATAATACTTCTAGTTAGGAGCGCAGGCTCTGATACTCTCAAACCTTTCCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR GCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGATGTCACTTTTCATGTTaGGGCATTTTCTGGCACTTG +
Preference number: 4 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGCHFSC*GIFWHL
Trigger: CAAGTGCCAGAAAATGCCGCAACATGAAAAGTGACA...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAACAGCCAGTGGAAGACTaGATATTGCACAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKQPVED*ILHSAA
Trigger: GGCTGCACTGTGCAATATGCAGTCTTCCACTGGCTG...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGAATGCCATTAGAAAGATGCTCTGAGTaGACAATAGACTTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: EPLGIRTLKLARLLRMPLERCSE*TIDLCC
Trigger: ACAGCACAAGTCTATTGTGCACTCAGAGCATCTTTC...TAATGGCATTCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAATTTCCTCTGGGTAGATaGCCCGTAGTGGGATTGCTG +
Preference number: 4 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKFPLGR*PVVGLL
Trigger: CAGCAATCCCACTACGGGGCATCTACCCAGAGGAAA...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAAACAGGCATGAGCCACTaGGCCCAGATGGTTCCATAT +
Preference number: 4 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKTGMSH*AQMVPY
Trigger: ATATGGAACCATCTGGGCGCAGTGGCTCATGCCTGT...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GGATTTATCCCATCCGAGGAACAGTTCATCTATTATACTTCACAGAGCATTAAGGTTCAAGCAATTCTCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GFIPSEEQFIYYTSQSIKVQAIL*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGAGAATTGCTTGAAC...CTTAATGCTCTGTGAAGTATAATAGATGAACTGTTCCTCGGATGGGATAAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTATAGGTACCTTGACATaGTGGAGGTTACTTCCGAGG +
Preference number: 4 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSIGTLT*WRLLPR
Trigger: CCTCGGAAGTAACCTCCACCATGTCAAGGTACCTAT...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAACCTCTGATGGGCTGCTaGGACCTTACCATTTACTGG +
Preference number: 4 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKPLMGC*DLTIYW
Trigger: CCAGTAAATGGTAAGGTCCCAGCAGCCCATCAGAGG...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTCCACCTGCTGATTCGTaGGTCCTTTCGACTGCACCA +
Preference number: 4 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTPPADS*VLSTAP
Trigger: TGGTGCAGTCGAAAGGACCCACGAATCAGCAGGTGG...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACACGGAGAAAGGTAGCCCCTaGAATTGTCTACGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: APRWFHIFPIANCAAINTEKGSP*NCLRKD
Trigger: ATCTTTCCGTAGACAATTCCAGGGGCTACCTTTCTC...CGTGTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GGAGGGAAAGGTTTGAGAGTATCAGAGCCTGCGCTCCTAACTAGAAGTATTATGTCTGCATCTGTAAAATaGGGAGAAATACCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GGKGLRVSEPALLTRSIMSASVK*GEIPPS
Trigger: TGAAGGAGGTATTTCTCCCCATTTTACAGATGCAGA...CATAATACTTCTAGTTAGGAGCGCAGGCTCTGATACTCTCAAACCTTTCCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGCTCCTTCCTACTCAGTaGCCGCAACTAAACCATTTA +
Preference number: 4 (lower is better)
Translates to: GQLLNRMELLRMEILFPLLLPTQ*PQLNHL
Trigger: TAAATGGTTTAGTTGCGGCCACTGAGTAGGAAGGAG...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GGAGGGAAAGGTTTGAGAGTATCAGAGCCTGCGCTCCTAACTAGAAGTATTATGTCCCCTAAGAAGCTATaGTTGTCACTTTTCATGTTG +
Preference number: 4 (lower is better)
Translates to: GGKGLRVSEPALLTRSIMSPKKL*LSLFML
Trigger: CAACATGAAAAGTGACAACCATAGCTTCTTAGGGGA...CATAATACTTCTAGTTAGGAGCGCAGGCTCTGATACTCTCAAACCTTTCCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGATGTCGCTATGGGATTTaGGGCATTATAACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: REREPLGIRTLKLARLLRCRYGI*GIITGS
Trigger: ACTTCCTGTTATAATGCCCCAAATCCCATAGCGACA...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAACTGAGCAGCACCAACTaGAGACTGGGTTTCTGCATC +
Preference number: 4 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKLSSTN*RLGFCI
Trigger: GATGCAGAAACCCAGTCTCCAGTTGGTGCTGCTCAG...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp TCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTAGTATCATGTTCACGCTaGATTCCCGCAGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: STHGQLLNRMELLRMEILVSCSR*IPAVSS
Trigger: AGAAGAAACTGCGGGAATTCAGCGTGAACATGATAC...TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAAACACCTTCCAGTTCCTaGTGGGGATGTTATGCTCCA +
Preference number: 4 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKTPSSS*WGCYAP
Trigger: TGGAGCATAACATCCCCATCAGGAACTGGAAGGTGT...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR TCA 90 bp TCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTAGATAGGATAGGAGATTaGAAATCGTGGAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: STHGQLLNRMELLRMEILDRIGD*KSWRER
Trigger: CCTTTCCCTCCACGATTTTCAATCTCCTATCCTATC...TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTATCCCACCACAATGTTaGATCGTTGCAGGCACGCAC +
Preference number: 4 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTIPPQC*IVAGTH
Trigger: GTGCGTGCCTGCAACGATGCAACATTGTGGTGGGAT...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR GCA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTAGTCCACTGTACATGTaGACACTTACGTACACACGT +
Preference number: 4 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSSPLYM*TLTYTR
Trigger: ACGTGTGTACGTAAGTGTGCACATGTACAGTGGACT...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR GCA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTGTGGGTCCTTTCGACTaGACCATTGGCTTCTCACCT +
Preference number: 4 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTVGPFD*TIGFSP
Trigger: AGGTGAGAAGCCAATGGTGCAGTCGAAAGGACCCAC...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACACGTGTCACTTTTCATGTTaGGGCATTTTCTGGCACTTG +
Preference number: 4 (lower is better)
Translates to: APRWFHIFPIANCAAINTCHFSC*GIFWHL
Trigger: CAAGTGCCAGAAAATGCCGCAACATGAAAAGTGACA...CGTGTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTAAGTTGTTCAGCACCTaGCGCCCGCAGAATGGCAAT +
Preference number: 4 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTKLFST*RPQNGN
Trigger: ATTGCCATTCTGCGGGCGGCAGGTGCTGAACAACTT...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTGGAGACTGGGTTTCTaGATCTTGGTGAACTATTAC +
Preference number: 4 (lower is better)
Translates to: GQLLNRMELLRMEILFPLWRLGF*ILVNYY
Trigger: GTAATAGTTCACCAAGATGCAGAAACCCAGTCTCCA...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTTTCAGAGCCTAAACTaGGAGAAAAGGGAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: GQLLNRMELLRMEILFPLFQSLN*EKREKL
Trigger: CAACTTCTCCCTTTTCTCCCAGTTTAGGCTCTGAAA...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR CCA 90 bp GGATTTATCCCATCCGAGGAACAGTTCATCTATTATACTTCACAGAGCATTAAGCAAAACAGTGAGCTGTaGCCGAGCAAAGTCAAGCTA +
Preference number: 4 (lower is better)
Translates to: GFIPSEEQFIYYTSQSIKQNSEL*PSKVKL
Trigger: TAGCTTGACTTTGCTCGGCCACAGCTCACTGTTTTG...CTTAATGCTCTGTGAAGTATAATAGATGAACTGTTCCTCGGATGGGATAAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR CCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGATCTGCATCTGTAAAATaGGGAGAAATACCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGSASVK*GEIPPS
Trigger: TGAAGGAGGTATTTCTCCCCATTTTACAGATGCAGA...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAAATTTTCTGGCACTTGTaGCAAATTGAGAAAATTGGA +
Preference number: 4 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQIFWHL*QIEKIG
Trigger: TCCAATTTTCTCAATTTGCCACAAGTGCCAGAAAAT...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGATCCCCTAAGAAGCTATaGTTGTCACTTTTCATGTTG +
Preference number: 4 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGSPKKL*LSLFML
Trigger: CAACATGAAAAGTGACAACCATAGCTTCTTAGGGGA...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GGATTTATCCCATCCGAGGAACAGTTCATCTATTATACTTCACAGAGCATTAAGGTATCATGTTCACGCTaGATTCCCGCAGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GFIPSEEQFIYYTSQSIKVSCSR*IPAVSS
Trigger: AGAAGAAACTGCGGGAATTCAGCGTGAACATGATAC...CTTAATGCTCTGTGAAGTATAATAGATGAACTGTTCCTCGGATGGGATAAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAAACGAAGTCATCTTTCTaGGACTCAGGCCTTAAGGCA +
Preference number: 4 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKTKSSF*DSGLKA
Trigger: TGCCTTAAGGCCTGAGTCTCAGAAAGATGACTTCGT...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR TCA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTTTTGACATTGTGAACTaGGGCATCCCAAATTTCACC +
Preference number: 4 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSFDIVN*GIPNFT
Trigger: GGTGAAATTTGGGATGCCTCAGTTCACAATGTCAAA...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR TCA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTAGCCTCTGCACTCCTTaGCCTTCTTTCATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTSLCTP*PSFIFP
Trigger: TGGGAAGATGAAAGAAGGTCAAGGAGTGCAGAGGCT...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR TCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAGAAAACAGCCAATTTaGTTTCTGAAACCATTGCTG +
Preference number: 4 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGRKQPI*FLKPLL
Trigger: CAGCAATGGTTTCAGAAATCAAATTGGCTGTTTTCT...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGAATGCCATTATTTTATCTGATGGCTTaGGTGACATTCCAATTTCCT +
Preference number: 4 (lower is better)
Translates to: EPLGIRTLKLARLLRMPLFYLMA*VTFQFP
Trigger: AGGAAATTGGAATGTCACTCAAGCCATCAGATAAAA...TAATGGCATTCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAGAGACATTAAGTATGTaGGAAGAATACCTCACGAAT +
Preference number: 4 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGETLSM*EEYLTN
Trigger: ATTCGTGAGGTATTCTTCTCACATACTTAATGTCTC...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTAATACCTCCTTCAATTaGCAAGACTTGGGGACGATA +
Preference number: 4 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSNTSFN*QDLGTI
Trigger: TATCGTCCCCAAGTCTTGGCAATTGAAGGAGGTATT...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp ACTGCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACAATACCTCCTTCAATTaGCAAGACTTGGGGACGATA +
Preference number: 4 (lower is better)
Translates to: TAPRWFHIFPIANCAAINNTSFN*QDLGTI
Trigger: TATCGTCCCCAAGTCTTGGCAATTGAAGGAGGTATT...GTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTCAGCCTCTGTGTCTTTaGTCTCCTTCCTACTCAGTG +
Preference number: 4 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTQPLCL*SPSYSV
Trigger: CACTGAGTAGGAAGGAGAGCAAAGACACAGAGGCTG...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTCACTTTCCTCCCTCTTaGATCCACTCTTCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTHFPPS*IHSSFP
Trigger: GGGAAAGGAAGAGTGGATGCAAGAGGGAGGAAAGTG...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTGTTCAAGCAATTCTCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTVQAIL*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGAGAATTGCTTGAAC...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGAAAAGTAGCCACACTTTaGTACTCAAAGTGTAGTCTA +
Preference number: 4 (lower is better)
Translates to: REREPLGIRTLKLARLLRKVATL*YSKCSL
Trigger: TAGACTACACTTTGAGTAGCAAAGTGTGGCTACTTT...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAAGGTACCTTGACATGGTaGAGGTTACTTCCGAGGATA +
Preference number: 4 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKGTLTW*RLLPRI
Trigger: TATCCTCGGAAGTAACCTCCACCATGTCAAGGTACC...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTGAGAAAGCTCTTGATTaGCGTGAGAAAGGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTEKALD*REKGSP
Trigger: GGGGCTACCTTTCTCACGCCAATCAAGAGCTTTCTC...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GGATTTATCCCATCCGAGGAACAGTTCATCTATTATACTTCACAGAGCATTAAGCTCCTTCCTACTCAGTaGCCGCAACTAAACCATTTA +
Preference number: 4 (lower is better)
Translates to: GFIPSEEQFIYYTSQSIKLLPTQ*PQLNHL
Trigger: TAAATGGTTTAGTTGCGGCCACTGAGTAGGAAGGAG...CTTAATGCTCTGTGAAGTATAATAGATGAACTGTTCCTCGGATGGGATAAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTGTGCATCCCAGCCAGTaGAAGACTGCATATTGCACA +
Preference number: 4 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTVHPSQ*KTAYCT
Trigger: TGTGCAATATGCAGTCTTCCACTGGCTGGGATGCAC...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGATGGAATTGCTCAGGATaGAAATACTATTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGWNCSG*KYYFLC
Trigger: ACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCA...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAACCCTCTGAGCAAGTCTaGGAGATTATTCTCAGTCTA +
Preference number: 4 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKPSEQV*EIILSL
Trigger: TAGACTGAGAATAATCTCTCAGACTTGCTCAGAGGG...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGCTGTGTTCTTTAATTaGTGGAGATGCTACATCTCA +
Preference number: 4 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSAVFFN*WRCYIS
Trigger: TGAGATGTAGCATCTCCATCAATTAAAGAACACAGC...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GGATTTATCCCATCCGAGGAACAGTTCATCTATTATACTTCACAGAGCATTAAGAACTGGCCAGGTTGCTaGGAATGCCATTATTTCATT +
Preference number: 4 (lower is better)
Translates to: GFIPSEEQFIYYTSQSIKNWPGC*ECHYFI
Trigger: AATGAAATAATGGCATTCTCAGCAACCTGGCCAGTT...CTTAATGCTCTGTGAAGTATAATAGATGAACTGTTCCTCGGATGGGATAAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp ACTGCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACTCCTTAAGTGAAAGATaGTCTGAGTGCACAATAGAC +
Preference number: 4 (lower is better)
Translates to: TAPRWFHIFPIANCAAINSLSER*SECTID
Trigger: GTCTATTGTGCACTCAGAGCATCTTTCACTTAAGGA...GTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGACTCCAGGGTTTCAATaGAGGAATAAGTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: GQLLNRMELLRMEILFPLTPGFQ*RNKFSF
Trigger: AAAACTGAACTTATTCCTCCATTGAAACCCTGGAGT...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR CCA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAATTTCGACTGCACCATTaGCTTCTCACCTCCTACAAT +
Preference number: 4 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKFRLHH*LLTSYN
Trigger: ATTGTAGGAGGTGAGAAGCCAATGGTGCAGTCGAAA...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAATGTTGCGGCATTTTCTaGCACTTGTGGCAAATTGAG +
Preference number: 4 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKCCGIF*HLWQIE
Trigger: CTCAATTTGCCACAAGTGCCAGAAAATGCCGCAACA...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACACGTGGAATTGCTCAGGATaGAAATACTATTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: APRWFHIFPIANCAAINTWNCSG*KYYFLC
Trigger: ACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCA...CGTGTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp TCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTGCTTCTCTACACATaGACAACTCTTAAACCGCAT +
Preference number: 4 (lower is better)
Translates to: STHGQLLNRMELLRMEILLLLYT*TTLKPH
Trigger: ATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA...TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGGATAACAGCTTATTTTaGATTTATCCCATCCGAGGA +
Preference number: 4 (lower is better)
Translates to: GQLLNRMELLRMEILFPLDNSLF*IYPIRG
Trigger: TCCTCGGATGGGATAAATCCAAAATAAGCTGTTATC...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp GGATTTATCCCATCCGAGGAACAGTTCATCTATTATACTTCACAGAGCATTAAGATTTACCACTCACTGTaGGCCAGGTACTGTAATAAT +
Preference number: 4 (lower is better)
Translates to: GFIPSEEQFIYYTSQSIKIYHSL*ARYCNN
Trigger: ATTATTACAGTACCTGGCTCACAGTGAGTGGTAAAT...CTTAATGCTCTGTGAAGTATAATAGATGAACTGTTCCTCGGATGGGATAAATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR TCA 90 bp ACTGCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACAGAAAACAGCCAATTTaGTTTCTGAAACCATTGCTG +
Preference number: 4 (lower is better)
Translates to: TAPRWFHIFPIANCAAINRKQPI*FLKPLL
Trigger: CAGCAATGGTTTCAGAAATCAAATTGGCTGTTTTCT...GTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAACTCCTACAGAAGACTTaGTTTAGGACTGAAGGCTAT +
Preference number: 4 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKLLQKT*FRTEGY
Trigger: ATAGCCTTCAGTCCTAAAGCAAGTCTTCTGTAGGAG...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAACTCCTACAGAAGACTTaGTTTAGGACTGAAGGCTAT +
Preference number: 4 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKLLQKT*FRTEGY
Trigger: ATAGCCTTCAGTCCTAAAGCAAGTCTTCTGTAGGAG...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp ACTGCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACATATTCCTGAACTTCTaGATCTGTAAAATGGGGAGA +
Preference number: 4 (lower is better)
Translates to: TAPRWFHIFPIANCAAINIFLNF*ICKMGR
Trigger: TCTCCCCATTTTACAGATGCAGAAGTTCAGGAATAT...GTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp TCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTAAAAGTAGCCACACTTTaGTACTCAAAGTGTAGTCTA +
Preference number: 4 (lower is better)
Translates to: STHGQLLNRMELLRMEILKVATL*YSKCSL
Trigger: TAGACTACACTTTGAGTAGCAAAGTGTGGCTACTTT...TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAATGTCGCTATGGGATTTaGGGCATTATAACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKCRYGI*GIITGS
Trigger: ACTTCCTGTTATAATGCCCCAAATCCCATAGCGACA...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTGCCACTGCGCCCAGATaGTTCCATATTTTTCCAATT +
Preference number: 4 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTATAPR*FHIFPI
Trigger: AATTGGAAAAATATGGAACCATCTGGGCGCAGTGGC...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
3UTR CAA 72 bp TTCTCTACACATGGACAACTCTTAAACCGCATGGAATaGCTCAGGATGGAAATACTATTTCCTCTGTACAAT +
Preference number: 4 (lower is better)
Translates to: FSTHGQLLNRME*LRMEILFPLYN
Trigger: ATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAATCAAAGTGTAGTCTATaGACTGTCGATATAAGGAGC +
Preference number: 4 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKSKCSL*TVDIRS
Trigger: GCTCCTTATATCGACAGTTCATAGACTACACTTTGA...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAACTGATGGGGATGTTATaGTCCATGATAGGATTGAAA +
Preference number: 4 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKLMGML*SMIGLK
Trigger: TTTCAATCCTATCATGGAGCATAACATCCCCATCAG...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR CCA 90 bp GGATTTATCCCATCCGAGGAACAGTTCATCTATTATACTTCACAGAGCATTAAGGATAACAGCTTATTTTaGATTTATCCCATCCGAGGA +
Preference number: 4 (lower is better)
Translates to: GFIPSEEQFIYYTSQSIKDNSLF*IYPIRG
Trigger: TCCTCGGATGGGATAAATCCAAAATAAGCTGTTATC...CTTAATGCTCTGTGAAGTATAATAGATGAACTGTTCCTCGGATGGGATAAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAATTTTATCTGATGGCTTaGGTGACATTCCAATTTCCT +
Preference number: 4 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKFYLMA*VTFQFP
Trigger: AGGAAATTGGAATGTCACTCAAGCCATCAGATAAAA...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR TCA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAAGAGACATTAAGTATGTaGGAAGAATACCTCACGAAT +
Preference number: 4 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKETLSM*EEYLTN
Trigger: ATTCGTGAGGTATTCTTCTCACATACTTAATGTCTC...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAAATATTCCTGAACTTCTaGATCTGTAAAATGGGGAGA +
Preference number: 4 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKIFLNF*ICKMGR
Trigger: TCTCCCCATTTTACAGATGCAGAAGTTCAGGAATAT...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR GCA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTGTAGAAGATGCATCTTaGTTTCAGTTGATAACAGCT +
Preference number: 4 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTVEDAS*FQLITA
Trigger: AGCTGTTATCAACTGAAAGCAAGATGCATCTTCTAC...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CCA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAAATTTTCTGGCACTTGTaGCAAATTGAGAAAATTGGA +
Preference number: 4 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKIFWHL*QIEKIG
Trigger: TCCAATTTTCTCAATTTGCCACAAGTGCCAGAAAAT...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS GCA 90 bp AGCACCTGCCGCCCGCAGAATGGCAATTGCACCGTCAGGACCACCTaGACGAAGGAGTTGCCGAAGCCACTGAGCCAGGCCAGAGCCACG +
Preference number: 5 (lower is better)
Translates to: STCRPQNGNCTVRTT*TKELPKPLSQARAT
Trigger: CGTGGCTCTGGCCTGGCTCAGTGGCTTCGGCAACTCCTTCGTGCAGGTGGTCCTGACGGTGCAATTGCCATTCTGCGGGCGGCAGGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS GCA 90 bp CTGCCGTCCTGGGCAGAAACGCCCACCAGGACCCCTCTTGGAACTTaGTACCTGCCTCTCTGCAGGCAGTTTCAACCCCTCACTCACCCT +
Preference number: 5 (lower is better)
Translates to: LPSWAETPTRTPLGT*YLPLCRQFQPLTHP
Trigger: AGGGTGAGTGAGGGGTTGAAACTGCCTGCAGAGAGGCAGGTAGCAAGTTCCAAGAGGGGTCCTGGTGGGCGTTTCTGCCCAGGACGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS CCA 90 bp CTCACCACTGCCGTCCTGGGCAGAAACGCCCACCAGGACCCCTCTTaGAACTTGCTACCTGCCTCTCTGCAGGCAGTTTCAACCCCTCAC +
Preference number: 5 (lower is better)
Translates to: LTTAVLGRNAHQDPS*NLLPASLQAVSTPH
Trigger: GTGAGGGGTTGAAACTGCCTGCAGAGAGGCAGGTAGCAAGTTCCAAGAGGGGTCCTGGTGGGCGTTTCTGCCCAGGACGGCAGTGGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS GCA 90 bp CCTGGGCAGAAACGCCCACCAGGACCCCTCTTGGAACTTGCTACCTaGCTCTCTGCAGGCAGTTTCAACCCCTCACTCACCCTCACACGA +
Preference number: 5 (lower is better)
Translates to: PGQKRPPGPLLELAT*LSAGSFNPSLTLTR
Trigger: TCGTGTGAGGGTGAGTGAGGGGTTGAAACTGCCTGCAGAGAGGCAGGTAGCAAGTTCCAAGAGGGGTCCTGGTGGGCGTTTCTGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS CCA 90 bp CATCGTTGCAGGCACGCACTGTCTGTATCCTCACCACTGCCGTCCTaGGCAGAAACGCCCACCAGGACCCCTCTTGGAACTTGCTACCTG +
Preference number: 5 (lower is better)
Translates to: HRCRHALSVSSPLPS*AETPTRTPLGTCYL
Trigger: CAGGTAGCAAGTTCCAAGAGGGGTCCTGGTGGGCGTTTCTGCCCAGGACGGCAGTGGTGAGGATACAGACAGTGCGTGCCTGCAACGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS TCA 90 bp TGCTGGGGAGACTCAGGGTTTCCCGGACTCTCCCTTGGCAGTACGTaGGGTCGGTGGAACTGCCTTAACCTTAGTCCCCCAGAGTGCCTA +
Preference number: 5 (lower is better)
Translates to: CWGDSGFPGLSLGST*GRWNCLNLSPPECL
Trigger: TAGGCACTCTGGGGGACTAAGGTTAAGGCAGTTCCACCGACCTCACGTACTGCCAAGGGAGAGTCCGGGAAACCCTGAGTCTCCCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS TCA 90 bp TGTACATGGGGCTGTGGAGTTGAGGATCCACCCGGGATGCCAGGATaGTGGCGACGTTCCCCAACATGGCCAGCACATAGGACAGCAGGA +
Preference number: 5 (lower is better)
Translates to: CTWGCGVEDPPGMPG*WRRSPTWPAHRTAG
Trigger: TCCTGCTGTCCTATGTGCTGGCCATGTTGGGGAACGTCGCCATCATCCTGGCATCCCGGGTGGATCCTCAACTCCACAGCCCCATGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS GCA 90 bp CAATGTTGCATCGTTGCAGGCACGCACTGTCTGTATCCTCACCACTaGCGTCCTGGGCAGAAACGCCCACCAGGACCCCTCTTGGAACTT +
Preference number: 5 (lower is better)
Translates to: QCCIVAGTHCLYPHH*RPGQKRPPGPLLEL
Trigger: AAGTTCCAAGAGGGGTCCTGGTGGGCGTTTCTGCCCAGGACGGCAGTGGTGAGGATACAGACAGTGCGTGCCTGCAACGATGCAACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS GCA 90 bp TCACAGAAAAAGTTGTTCAGCACCTGCCGCCCGCAGAATGGCAATTaGACCGTCAGGACCACCTGCACGAAGGAGTTGCCGAAGCCACTG +
Preference number: 5 (lower is better)
Translates to: SQKKLFSTCRPQNGN*TVRTTCTKELPKPL
Trigger: CAGTGGCTTCGGCAACTCCTTCGTGCAGGTGGTCCTGACGGTGCAATTGCCATTCTGCGGGCGGCAGGTGCTGAACAACTTTTTCTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS GCA 90 bp TCAACACCCACACAATGCTGTGATCCCACCACAATGTTGCATCGTTaGAGGCACGCACTGTCTGTATCCTCACCACTGCCGTCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: STPTQCCDPTTMLHR*RHALSVSSPLPSWA
Trigger: TGCCCAGGACGGCAGTGGTGAGGATACAGACAGTGCGTGCCTGCAACGATGCAACATTGTGGTGGGATCACAGCATTGTGTGGGTGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS TCA 90 bp AACCCGTCGCTCAAGAGTTACCTGCTGATTGTATCATGTTCACGCTaGATTCCCGCAGTTTCTTCTGGGGGCTGCTGGCAGGCTAGGCTG +
Preference number: 5 (lower is better)
Translates to: NPSLKSYLLIVSCSR*IPAVSSGGCWQARL
Trigger: CAGCCTAGCCTGCCAGCAGCCCCCAGAAGAAACTGCGGGAATTCAGCGTGAACATGATACAATCAGCAGGTAACTCTTGAGCGACGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS GCA 90 bp ATTATTCTCAGTCTAGAAGGAGTCTGCTGTCCGTTGCAACAGGCTTaGTGGGGAGACTCAGGGTTTCCCGGACTCTCCCTTGGCAGTACG +
Preference number: 5 (lower is better)
Translates to: IILSLEGVCCPLQQA*WGDSGFPGLSLGST
Trigger: CGTACTGCCAAGGGAGAGTCCGGGAAACCCTGAGTCTCCCCAGCAAGCCTGTTGCAACGGACAGCAGACTCCTTCTAGACTGAGAATAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS CCA 90 bp ACTACCCAAGTACAGGTGCCCCCTCAAGGCACAGCCTTGCTTCCCTaGATGGACACAGTAGTTCCCACAAACATCGCCATCGCATTCAGA +
Preference number: 5 (lower is better)
Translates to: TTQVQVPPQGTALLP*MDTVVPTNIAIAFR
Trigger: TCTGAATGCGATGGCGATGTTTGTGGGAACTACTGTGTCCATCCAGGGAAGCAAGGCTGTGCCTTGAGGGGGCACCTGTACTTGGGTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS CCA 90 bp CTGGGTTGCCACCTGCTGATTCGTGGGTCCTTTCGACTGCACCATTaGCTTCTCACCTCCTACAATCGCTCAAGCATTGCACACCTTCCA +
Preference number: 5 (lower is better)
Translates to: LGCHLLIRGSFRLHH*LLTSYNRSSIAHLP
Trigger: TGGAAGGTGTGCAATGCTTGAGCGATTGTAGGAGGTGAGAAGCCAATGGTGCAGTCGAAAGGACCCACGAATCAGCAGGTGGCAACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS TCA 90 bp GGAATTGTCCACCTTCTTAGGCTGCTGATTGTATCATGTTCACGCTaGATTCCCGCAGTTTCTTCTGGGGGCTGCTGGCAGGCTAGGCTG +
Preference number: 5 (lower is better)
Translates to: GIVHLLRLLIVSCSR*IPAVSSGGCWQARL
Trigger: CAGCCTAGCCTGCCAGCAGCCCCCAGAAGAAACTGCGGGAATTCAGCGTGAACATGATACAATCAGCAGCCTAAGAAGGTGGACAATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641613.1
CDS TCA 90 bp TTTCTGAAACCATTGCTGTTAGGAAGCAACTGGGTTGCCACCTGCTaGTTCGTGGGTCCTTTCGACTGCACCATTGGCTTCTCACCTCCT +
Preference number: 5 (lower is better)
Translates to: FLKPLLLGSNWVATC*FVGPFDCTIGFSPP
Trigger: AGGAGGTGAGAAGCCAATGGTGCAGTCGAAAGGACCCACGAATCAGCAGGTGGCAACCCAGTTGCTTCCTAACAGCAATGGTTTCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp GGAGGGAAAGGTTTGAGAGTATCAGAGCCTGCGCTCCTAACTAGAAGTATTATGTTCAGGCAACACACCTaGCCCGTGTCACGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: GGKGLRVSEPALLTRSIMFRQHT*PVSRSL
Trigger: CAGAGAGCGTGACACGGGCAAGGTGTGTTGCCTGAA...CATAATACTTCTAGTTAGGAGCGCAGGCTCTGATACTCTCAAACCTTTCCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAGGAGTCTGCTGTCCGTaGCAACAGGCTTGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGGVCCP*QQACWG
Trigger: TCCCCAGCAAGCCTGTTGCAACGGACAGCAGACTCC...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGAACCTGCACGAAGGAGTaGCCGAAGCCACTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: REREPLGIRTLKLARLLRTCTKE*PKPLSQ
Trigger: CTGGCTCAGTGGCTTCGGCAACTCCTTCGTGCAGGT...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS TCA 90 bp CTGATGGGCTGCTGGGACCTTACCATTTACTGGAACCCAACCCTCTaGGCAAGTCTGAGAGATTATTCTCAGTCTAGAAGGAGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: LMGCWDLTIYWNPTL*ASLRDYSQSRRSLL
Trigger: CAGCAGACTCCTTCTAGACTGAGAATAATCTCTCAGACTTGCTCAGAGGGTTGGGTTCCAGTAAATGGTAAGGTCCCAGCAGCCCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS-3UTR CAA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGATCCGTTGCAACAGGCTaGCTGGGGAGACTCAGGGTT +
Preference number: 5 (lower is better)
Translates to: REREPLGIRTLKLARLLRSVATG*LGRLRV
Trigger: AACCCTGAGTCTCCCCAGCAAGCCTGTTGCAACGGA...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGCCACCAGGACCCCTCTaGGAACTTGCTACCTGCCTC +
Preference number: 5 (lower is better)
Translates to: GQLLNRMELLRMEILFPLPPGPL*ELATCL
Trigger: GAGGCAGGTAGCAAGTTCCAAGAGGGGTCCTGGTGG...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR CAA 90 bp TCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTACATGGGGCTGTGGAGTaGAGGATCCACCCGGGATGC +
Preference number: 5 (lower is better)
Translates to: STHGQLLNRMELLRMEILHGAVE*RIHPGC
Trigger: GCATCCCGGGTGGATCCTCAACTCCACAGCCCCATG...TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGACCTGCACGAAGGAGTaGCCGAAGCCACTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: GQLLNRMELLRMEILFPLTCTKE*PKPLSQ
Trigger: CTGGCTCAGTGGCTTCGGCAACTCCTTCGTGCAGGT...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS TCA 90 bp GCTGGGACCTTACCATTTACTGGAACCCAACCCTCTGAGCAAGTCTaGGAGATTATTCTCAGTCTAGAAGGAGTCTGCTGTCCGTTGCAA +
Preference number: 5 (lower is better)
Translates to: AGTLPFTGTQPSEQV*EIILSLEGVCCPLQ
Trigger: TTGCAACGGACAGCAGACTCCTTCTAGACTGAGAATAATCTCTCAGACTTGCTCAGAGGGTTGGGTTCCAGTAAATGGTAAGGTCCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS GCA 90 bp CACTCTAGTTCAGCACCGAAGTTAAAGAATTCAACACCCACACAATaGTGTGATCCCACCACAATGTTGCATCGTTGCAGGCACGCACTG +
Preference number: 5 (lower is better)
Translates to: HSSSAPKLKNSTPTQ*CDPTTMLHRCRHAL
Trigger: CAGTGCGTGCCTGCAACGATGCAACATTGTGGTGGGATCACAGCATTGTGTGGGTGTTGAATTCTTTAACTTCGGTGCTGAACTAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS GCA 90 bp GCCAATTTGATTTCTGAAACCATTGCTGTTAGGAAGCAACTGGGTTaGCACCTGCTGATTCGTGGGTCCTTTCGACTGCACCATTGGCTT +
Preference number: 5 (lower is better)
Translates to: ANLISETIAVRKQLG*HLLIRGSFRLHHWL
Trigger: AAGCCAATGGTGCAGTCGAAAGGACCCACGAATCAGCAGGTGGCAACCCAGTTGCTTCCTAACAGCAATGGTTTCAGAAATCAAATTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp ACTGCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACCCCGCAGAATGGCAATaGCACCGTCAGGACCACCTG +
Preference number: 5 (lower is better)
Translates to: TAPRWFHIFPIANCAAINPAEWQ*HRQDHL
Trigger: CAGGTGGTCCTGACGGTGCAATTGCCATTCTGCGGG...GTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp GAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGAATGCCATTAACCTCACAGAAAAAGTaGTTCAGCACCTGCCGCCCG +
Preference number: 5 (lower is better)
Translates to: EPLGIRTLKLARLLRMPLTSQKK*FSTCRP
Trigger: CGGGCGGCAGGTGCTGAACAACTTTTTCTGTGAGGT...TAATGGCATTCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTTCAGCACACGACAGCTaGATCACGGCCGGCACCTCA +
Preference number: 5 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSSAHDS*ITAGTS
Trigger: TGAGGTGCCGGCCGTGATCAAGCTGTCGTGTGCTGA...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp ACTGCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACGCCTTGTGTCGTCCCTaGGAGGACTGGATCCTGAGC +
Preference number: 5 (lower is better)
Translates to: TAPRWFHIFPIANCAAINALCRP*EDWILS
Trigger: GCTCAGGATCCAGTCCTCCAAGGGACGACACAAGGC...GTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTAGCCTTGTGTCGTCCCTaGGAGGACTGGATCCTGAGC +
Preference number: 5 (lower is better)
Translates to: STHGQLLNRMELLRMEILALCRP*EDWILS
Trigger: GCTCAGGATCCAGTCCTCCAAGGGACGACACAAGGC...TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTACACGTCCCAAAGGCCTaGTGTCGTCCCTTGGAGGAC +
Preference number: 5 (lower is better)
Translates to: STHGQLLNRMELLRMEILHVPKA*CRPLED
Trigger: GTCCTCCAAGGGACGACACAAGGCCTTTGGGACGTG...TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGACGTGGAGGGAAAGGTTaGAGAGTATCAGAGCCTGCG +
Preference number: 5 (lower is better)
Translates to: REREPLGIRTLKLARLLRRGGKG*RVSEPA
Trigger: CGCAGGCTCTGATACTCTCAAACCTTTCCCTCCACG...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS GCA 90 bp TGGTGGAGGTTACTTCCGAGGATAAGGCTTTCAGGCAACACACCTTaGCCGTGTCACGCTCTCTGTTCATTTCAAAATTATCCCTCAGAT +
Preference number: 5 (lower is better)
Translates to: WWRLLPRIRLSGNTP*PCHALCSFQNYPSD
Trigger: ATCTGAGGGATAATTTTGAAATGAACAGAGAGCGTGACACGGGCAAGGTGTGTTGCCTGAAAGCCTTATCCTCGGAAGTAACCTCCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS CCA 90 bp AGCCCCAGTAGCAGCCTCTGTGTCTTTGCTCTCCTTCCTACTCAGTaGCCGCAACTAAACCATTTAATATTCCTGAACTTCTGCATCTGT +
Preference number: 5 (lower is better)
Translates to: SPSSSLCVFALLPTQ*PQLNHLIFLNFCIC
Trigger: ACAGATGCAGAAGTTCAGGAATATTAAATGGTTTAGTTGCGGCCACTGAGTAGGAAGGAGAGCAAAGACACAGAGGCTGCTACTGGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS CCA 90 bp AGCCCCAGTAGCAGCCTCTGTGTCTTTGCTCTCCTTCCTACTCAGTaGCCGCAACTAAACCATTTAATATTCCTGAACTTCTGCATCTCA +
Preference number: 5 (lower is better)
Translates to: SPSSSLCVFALLPTQ*PQLNHLIFLNFCIS
Trigger: TGAGATGCAGAAGTTCAGGAATATTAAATGGTTTAGTTGCGGCCACTGAGTAGGAAGGAGAGCAAAGACACAGAGGCTGCTACTGGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641613.1
CDS-3UTR CAA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTTTCAGGCAACACACCTaGCCCGTGTCACGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSFRQHT*PVSRSL
Trigger: CAGAGAGCGTGACACGGGCAAGGTGTGTTGCCTGAA...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp GGATTTATCCCATCCGAGGAACAGTTCATCTATTATACTTCACAGAGCATTAAGGGAGTCTGCTGTCCGTaGCAACAGGCTTGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: GFIPSEEQFIYYTSQSIKGVCCP*QQACWG
Trigger: TCCCCAGCAAGCCTGTTGCAACGGACAGCAGACTCC...CTTAATGCTCTGTGAAGTATAATAGATGAACTGTTCCTCGGATGGGATAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAATATTGCAGTCTGTGTaGGCCTTAGTCGCGGAGGGA +
Preference number: 5 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGILQSV*ALVAEG
Trigger: TCCCTCCGCGACTAAGGCCAACACAGACTGCAATAT...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGACCCCTCTTGGAACTaGCTACCTGCCTCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSDPSWN*LPASLQ
Trigger: CTGCAGAGAGGCAGGTAGCAAGTTCCAAGAGGGGTC...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR CAA 90 bp ACTGCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACCCTCAAGGCACAGCCTaGCTTCCCTGGATGGACACA +
Preference number: 5 (lower is better)
Translates to: TAPRWFHIFPIANCAAINPQGTA*LPWMDT
Trigger: TGTGTCCATCCAGGGAAGCAAGGCTGTGCCTTGAGG...GTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR CAA 90 bp GGAGGGAAAGGTTTGAGAGTATCAGAGCCTGCGCTCCTAACTAGAAGTATTATGCTTTCGACTGCACCATaGGCTTCTCACCTCCTACAA +
Preference number: 5 (lower is better)
Translates to: GGKGLRVSEPALLTRSIMLSTAP*ASHLLQ
Trigger: TTGTAGGAGGTGAGAAGCCAATGGTGCAGTCGAAAG...CATAATACTTCTAGTTAGGAGCGCAGGCTCTGATACTCTCAAACCTTTCCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAACATGGGGCTGTGGAGTaGAGGATCCACCCGGGATGC +
Preference number: 5 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKHGAVE*RIHPGC
Trigger: GCATCCCGGGTGGATCCTCAACTCCACAGCCCCATG...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp GGATTTATCCCATCCGAGGAACAGTTCATCTATTATACTTCACAGAGCATTAAGCCCGCAGAATGGCAATaGCACCGTCAGGACCACCTG +
Preference number: 5 (lower is better)
Translates to: GFIPSEEQFIYYTSQSIKPAEWQ*HRQDHL
Trigger: CAGGTGGTCCTGACGGTGCAATTGCCATTCTGCGGG...CTTAATGCTCTGTGAAGTATAATAGATGAACTGTTCCTCGGATGGGATAAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp GGATTTATCCCATCCGAGGAACAGTTCATCTATTATACTTCACAGAGCATTAAGTCAGCACACGACAGCTaGATCACGGCCGGCACCTCA +
Preference number: 5 (lower is better)
Translates to: GFIPSEEQFIYYTSQSIKSAHDS*ITAGTS
Trigger: TGAGGTGCCGGCCGTGATCAAGCTGTCGTGTGCTGA...CTTAATGCTCTGTGAAGTATAATAGATGAACTGTTCCTCGGATGGGATAAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGCGTGGAGGGAAAGGTTaGAGAGTATCAGAGCCTGCG +
Preference number: 5 (lower is better)
Translates to: GQLLNRMELLRMEILFPLRGGKG*RVSEPA
Trigger: CGCAGGCTCTGATACTCTCAAACCTTTCCCTCCACG...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS TCA 90 bp GGAAAGATCAGACTGCCCTCTAGGGCTAGGTTTTATCTGATGGCTTaGGTGACATTCCAATTTCCTGCACAATTTCTTTGCCGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: GKIRLPSRARFYLMA*VTFQFPAQFLCRAA
Trigger: AGCTGCTCGGCAAAGAAATTGTGCAGGAAATTGGAATGTCACTCAAGCCATCAGATAAAACCTAGCCCTAGAGGGCAGTCTGATCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAATTCCCGGACTCTCCCTaGGCAGTACGTGAGGTCGGT +
Preference number: 5 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKFPDSP*AVREVG
Trigger: ACCGACCTCACGTACTGCCAAGGGAGAGTCCGGGAA...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp GGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGATATTGCAGTCTGTGTaGGCCTTAGTCGCGGAGGGA +
Preference number: 5 (lower is better)
Translates to: GQLLNRMELLRMEILFPLILQSV*ALVAEG
Trigger: TCCCTCCGCGACTAAGGCCAACACAGACTGCAATAT...CAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTAGATCCCACCACAATGTaGCATCGTTGCAGGCACGCA +
Preference number: 5 (lower is better)
Translates to: STHGQLLNRMELLRMEILDPTTM*HRCRHA
Trigger: TGCGTGCCTGCAACGATGCAACATTGTGGTGGGATC...TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR CAA 90 bp GGCATTATAACAGGAAGTGAGATGTTTGAAGACAGGGTTTTTGAGCTCTCTGGGACAATCGCTCAAGCATaGCACACCTTCCAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: GIITGSEMFEDRVFELSGTIAQA*HTFQFL
Trigger: CAGGAACTGGAAGGTGTGCAATGCTTGAGCGATTGT...CCCAGAGAGCTCAAAAACCCTGTCTTCAAACATCTCACTTCCTGTTATAATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAAGTCACTGGCTCACGCTaGCATCCAGCTCCCGGATTC +
Preference number: 5 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKVTGSR*HPAPGF
Trigger: GAATCCGGGAGCTGGATGCAAGCGTGAGCCAGTGAC...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAACACATCGACAAGGAATaGTCCACCTTCTTAGGCTTT +
Preference number: 5 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQHIDKE*STFLGF
Trigger: AAAGCCTAAGAAGGTGGACAATTCCTTGTCGATGTG...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAACCTAAGAAGCTATGGTaGTCACTTTTCATGTTGCGG +
Preference number: 5 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQPKKLW*SLFMLR
Trigger: CCGCAACATGAAAAGTGACAACCATAGCTTCTTAGG...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp GGCATTATAACAGGAAGTGAGATGTTTGAAGACAGGGTTTTTGAGCTCTCTGGGGTGGAAGACTGCATATaGCACAGTGCAGCCTCCATA +
Preference number: 5 (lower is better)
Translates to: GIITGSEMFEDRVFELSGVEDCI*HSAASI
Trigger: TATGGAGGCTGCACTGTGCAATATGCAGTCTTCCAC...CCCAGAGAGCTCAAAAACCCTGTCTTCAAACATCTCACTTCCTGTTATAATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAGTGGAAGACTGCATATaGCACAGTGCAGCCTCCATA +
Preference number: 5 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGVEDCI*HSAASI
Trigger: TATGGAGGCTGCACTGTGCAATATGCAGTCTTCCAC...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAATTGTCGCTATGGGATTaGGGGCATTATAACAGGAAG +
Preference number: 5 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQLSLWD*GHYNRK
Trigger: CTTCCTGTTATAATGCCCCAAATCCCATAGCGACAA...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS TCA 90 bp TCAATTACCAAAAACGTAAGAACCCGTCGCTCAAGAGTTACCTGCTaGTTGTATCATGTTCACGCTGAATTCCCGCAGTTTCTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: SITKNVRTRRSRVTC*LYHVHAEFPQFLLG
Trigger: CCCCAGAAGAAACTGCGGGAATTCAGCGTGAACATGATACAATCAGCAGGTAACTCTTGAGCGACGGGTTCTTACGTTTTTGGTAATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS TCA 90 bp CTTACATGTTGCAACAGGTGTTCCCTGCTGCCCCAGTTGATGTTCTaGAGAACTCTACTGTTACTGGAAAACAACTCAAACTCCAGGGTT +
Preference number: 5 (lower is better)
Translates to: LTCCNRCSLLPQLMF*RTLLLLENNSNSRV
Trigger: AACCCTGGAGTTTGAGTTGTTTTCCAGTAACAGTAGAGTTCTTCAGAACATCAACTGGGGCAGCAGGGAACACCTGTTGCAACATGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS GCA 90 bp GATATATATCATTCCCTCCAGGGTTCCTGGCTCCTACAGAAGACTTaGTTTAGGACTGAAGGCTATATTGCAGTCTGTGTTGGCCTTAGT +
Preference number: 5 (lower is better)
Translates to: DIYHSLQGSWLLQKT*FRTEGYIAVCVGLS
Trigger: ACTAAGGCCAACACAGACTGCAATATAGCCTTCAGTCCTAAAGCAAGTCTTCTGTAGGAGCCAGGAACCCTGGAGGGAATGATATATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS-3UTR CAA 90 bp GGCATTATAACAGGAAGTGAGATGTTTGAAGACAGGGTTTTTGAGCTCTCTGGGACAGGGAGAAAGCTCTaGATTGGCGTGAGAAAGGTA +
Preference number: 5 (lower is better)
Translates to: GIITGSEMFEDRVFELSGTGRKL*IGVRKV
Trigger: TACCTTTCTCACGCCAATCAAGAGCTTTCTCCCTGT...CCCAGAGAGCTCAAAAACCCTGTCTTCAAACATCTCACTTCCTGTTATAATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTGTCACTGGCTCACGCTaGCATCCAGCTCCCGGATTC +
Preference number: 5 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTVTGSR*HPAPGF
Trigger: GAATCCGGGAGCTGGATGCAAGCGTGAGCCAGTGAC...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGACAGGTGATAGCCTGTTaGATTCTCCTTACCTCTGTG +
Preference number: 5 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGQVIAC*ILLTSV
Trigger: CACAGAGGTAAGGAGAATCAAACAGGCTATCACCTG...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS TCA 90 bp AGGCAGTTTCAACCCCTCACTCACCCTCACACGAAGTCATCTTTCTaGGACTCAGGCCTTAAGGCAAAGATATCTTTAGGTGTTTCAATT +
Preference number: 5 (lower is better)
Translates to: RQFQPLTHPHTKSSF*DSGLKAKISLGVSI
Trigger: AATTGAAACACCTAAAGATATCTTTGCCTTAAGGCCTGAGTCTCAGAAAGATGACTTCGTGTGAGGGTGAGTGAGGGGTTGAAACTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR CAA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTTCCGTTGCAACAGGCTaGCTGGGGAGACTCAGGGTT +
Preference number: 5 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTSVATG*LGRLRV
Trigger: AACCCTGAGTCTCCCCAGCAAGCCTGTTGCAACGGA...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTTGCTCAGCTTACATGTaGCAACAGGTGTTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSCSAYM*QQVFPA
Trigger: AGCAGGGAACACCTGTTGCAACATGTAAGCTGAGCA...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR CAA 90 bp AGAGAAAGAGAACCTTTGGGCATTAGGACATTAAAACTGGCCAGGTTGCTGAGACACATCGACAAGGAATaGTCCACCTTCTTAGGCTTT +
Preference number: 5 (lower is better)
Translates to: REREPLGIRTLKLARLLRHIDKE*STFLGF
Trigger: AAAGCCTAAGAAGGTGGACAATTCCTTGTCGATGTG...TCTCAGCAACCTGGCCAGTTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGACCTAAGAAGCTATGGTaGTCACTTTTCATGTTGCGG +
Preference number: 5 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGPKKLW*SLFMLR
Trigger: CCGCAACATGAAAAGTGACAACCATAGCTTCTTAGG...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAAAAATTTGCCCTGCTCTaGGGAGTAGCTGGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKKFALL*GVAGRG
Trigger: CCCCCTTCCAGCTACTCCCAAGAGCAGGGCAAATTT...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAAAAATTTGCCCTGCTCTaGGGAGTAGCTGGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKKFALL*GVAGRG
Trigger: CCCCCTTCCAGCTACTCCCAAGAGCAGGGCAAATTT...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp ACTGCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACGTGCCTATAGGTACCTaGACATGGTGGAGGTTACTT +
Preference number: 5 (lower is better)
Translates to: TAPRWFHIFPIANCAAINVPIGT*TWWRLL
Trigger: AAGTAACCTCCACCATGTCAAGGTACCTATAGGCAC...GTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGGACTGAAGGCTATATaGCAGTCTGTGTTGGCCTTA +
Preference number: 5 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSGLKAI*QSVLAL
Trigger: TAAGGCCAACACAGACTGCAATATAGCCTTCAGTCC...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAACACAATGTTGCATCGTaGCAGGCACGCACTGTCTGT +
Preference number: 5 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKHNVAS*QARTVC
Trigger: ACAGACAGTGCGTGCCTGCAACGATGCAACATTGTG...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR CAA 90 bp GGATTTATCCCATCCGAGGAACAGTTCATCTATTATACTTCACAGAGCATTAAGACAATCGCTCAAGCATaGCACACCTTCCAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: GFIPSEEQFIYYTSQSIKTIAQA*HTFQFL
Trigger: CAGGAACTGGAAGGTGTGCAATGCTTGAGCGATTGT...CTTAATGCTCTGTGAAGTATAATAGATGAACTGTTCCTCGGATGGGATAAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAATCCTGCACAATTTCTTaGCCGAGCAGCTGTCACCTC +
Preference number: 5 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKSCTIS*PSSCHL
Trigger: GAGGTGACAGCTGCTCGGCAAAGAAATTGTGCAGGA...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTACAGGGAGAAAGCTCTaGATTGGCGTGAGAAAGGTA +
Preference number: 5 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSTGRKL*IGVRKV
Trigger: TACCTTTCTCACGCCAATCAAGAGCTTTCTCCCTGT...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TTGCTTCTCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGATTCAATTGCCAAGACTaGGGGACGATAGAGACATTA +
Preference number: 5 (lower is better)
Translates to: LLLYTWTTLKPHGIAQDGFNCQD*GTIETL
Trigger: TAATGTCTCTATCGTCCCCAAGTCTTGGCAATTGAA...TCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGAGAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp ACTGCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACCAGGTGATAGCCTGTTaGATTCTCCTTACCTCTGTG +
Preference number: 5 (lower is better)
Translates to: TAPRWFHIFPIANCAAINQVIAC*ILLTSV
Trigger: CACAGAGGTAAGGAGAATCAAACAGGCTATCACCTG...GTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTACCTCACAGAAAAAGTaGTTCAGCACCTGCCGCCCG +
Preference number: 5 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTTSQKK*FSTCRP
Trigger: CGGGCGGCAGGTGCTGAACAACTTTTTCTGTGAGGT...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp GAGACTGGGTTTCTGCATCTTGGTGAACTATTACCGACTGCCTTCCTGCTACAAAGAGAAAGAGAACCTTaGGGCATTAGGACATTAAAA +
Preference number: 5 (lower is better)
Translates to: ETGFLHLGELLPTAFLLQREREP*GIRTLK
Trigger: TTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT...TTGTAGCAGGAAGGCAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp ACTGCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACCTGGGTTTCTGCATCTaGGTGAACTATTACCGACTG +
Preference number: 5 (lower is better)
Translates to: TAPRWFHIFPIANCAAINLGFCI*VNYYRL
Trigger: CAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAG...GTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS TCA 90 bp AATGTGATCTTATCTCTAACGAGCTCAAGATGCCTGTCAAAACAGTaGGCTGTGGCCGAGCAAAGTCAAGCTAGCACATTTTTAAGTCTA +
Preference number: 5 (lower is better)
Translates to: NVILSLTSSRCLSKQ*AVAEQSQASTFLSL
Trigger: TAGACTTAAAAATGTGCTAGCTTGACTTTGCTCGGCCACAGCTCACTGTTTTGACAGGCATCTTGAGCTCGTTAGAGATAAGATCACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS TCA 90 bp TCCTTCAATTGCCAAGACTTGGGGACGATAGAGACATTAAGTATGTaGGAAGAATACCTCACGAATGACAATTATGTTCCAGGTAGAGCG +
Preference number: 5 (lower is better)
Translates to: SFNCQDLGTIETLSM*EEYLTNDNYVPGRA
Trigger: CGCTCTACCTGGAACATAATTGTCATTCGTGAGGTATTCTTCTCACATACTTAATGTCTCTATCGTCCCCAAGTCTTGGCAATTGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS GCA 90 bp CCTACTCAGTGGCCGCAACTAAACCATTTAATATTCCTGAACTTCTaGATCTGTAAAATGGGGAGAAATACCTCCTTCAATTGCCAAGAC +
Preference number: 5 (lower is better)
Translates to: PTQWPQLNHLIFLNF*ICKMGRNTSFNCQD
Trigger: GTCTTGGCAATTGAAGGAGGTATTTCTCCCCATTTTACAGATGCAGAAGTTCAGGAATATTAAATGGTTTAGTTGCGGCCACTGAGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp GGAGGGAAAGGTTTGAGAGTATCAGAGCCTGCGCTCCTAACTAGAAGTATTATGAAAACCACACACGTTTaGTCAGAAAGTTGCCAATAT +
Preference number: 5 (lower is better)
Translates to: GGKGLRVSEPALLTRSIMKTTHV*SESCQY
Trigger: ATATTGGCAACTTTCTGACAAAACGTGTGTGGTTTT...CATAATACTTCTAGTTAGGAGCGCAGGCTCTGATACTCTCAAACCTTTCCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS-3UTR CAA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAACTTTCGACTGCACCATaGGCTTCTCACCTCCTACAA +
Preference number: 5 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKLSTAP*ASHLLQ
Trigger: TTGTAGGAGGTGAGAAGCCAATGGTGCAGTCGAAAG...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTTCCTGCACAATTTCTTaGCCGAGCAGCTGTCACCTC +
Preference number: 5 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTSCTIS*PSSCHL
Trigger: GAGGTGACAGCTGCTCGGCAAAGAAATTGTGCAGGA...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp GGAGGGAAAGGTTTGAGAGTATCAGAGCCTGCGCTCCTAACTAGAAGTATTATGAGAGAAAGAGAACCTTaGGGCATTAGGACATTAAAA +
Preference number: 5 (lower is better)
Translates to: GGKGLRVSEPALLTRSIMREREP*GIRTLK
Trigger: TTTTAATGTCCTAATGCCCAAAGGTTCTCTTTCTCT...CATAATACTTCTAGTTAGGAGCGCAGGCTCTGATACTCTCAAACCTTTCCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp GGATTTATCCCATCCGAGGAACAGTTCATCTATTATACTTCACAGAGCATTAAGCTGGGTTTCTGCATCTaGGTGAACTATTACCGACTG +
Preference number: 5 (lower is better)
Translates to: GFIPSEEQFIYYTSQSIKLGFCI*VNYYRL
Trigger: CAGTCGGTAATAGTTCACCAAGATGCAGAAACCCAG...CTTAATGCTCTGTGAAGTATAATAGATGAACTGTTCCTCGGATGGGATAAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAAGTGCCTATAGGTACCTaGACATGGTGGAGGTTACTT +
Preference number: 5 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKVPIGT*TWWRLL
Trigger: AAGTAACCTCCACCATGTCAAGGTACCTATAGGCAC...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAAGGACTGAAGGCTATATaGCAGTCTGTGTTGGCCTTA +
Preference number: 5 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKGLKAI*QSVLAL
Trigger: TAAGGCCAACACAGACTGCAATATAGCCTTCAGTCC...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp GGATTTATCCCATCCGAGGAACAGTTCATCTATTATACTTCACAGAGCATTAAGAAATACCTCCTTCAATaGCCAAGACTTGGGGACGAT +
Preference number: 5 (lower is better)
Translates to: GFIPSEEQFIYYTSQSIKKYLLQ*PRLGDD
Trigger: ATCGTCCCCAAGTCTTGGCAATTGAAGGAGGTATTT...CTTAATGCTCTGTGAAGTATAATAGATGAACTGTTCCTCGGATGGGATAAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp GGCATTATAACAGGAAGTGAGATGTTTGAAGACAGGGTTTTTGAGCTCTCTGGGTTTTCCAATTGCAAATaGTGCTGCTATAAACACGCA +
Preference number: 5 (lower is better)
Translates to: GIITGSEMFEDRVFELSGFSNCK*CCYKHA
Trigger: TGCGTGTTTATAGCAGCACAATTTGCAATTGGAAAA...CCCAGAGAGCTCAAAAACCCTGTCTTCAAACATCTCACTTCCTGTTATAATGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS TCA 90 bp TTCTGGCACTTGTGGCAAATTGAGAAAATTGGAATGAATAATACCTaGGAAGAGGAATTGATCACTTTCCTCCCTCTTGCATCCACTCTT +
Preference number: 5 (lower is better)
Translates to: FWHLWQIEKIGMNNT*EEELITFLPLASTL
Trigger: AAGAGTGGATGCAAGAGGGAGGAAAGTGATCAATTCCTCTTCTCAGGTATTATTCATTCCAATTTTCTCAATTTGCCACAAGTGCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp GGATTTATCCCATCCGAGGAACAGTTCATCTATTATACTTCACAGAGCATTAAGTTCAATTGCCAAGACTaGGGGACGATAGAGACATTA +
Preference number: 5 (lower is better)
Translates to: GFIPSEEQFIYYTSQSIKFNCQD*GTIETL
Trigger: TAATGTCTCTATCGTCCCCAAGTCTTGGCAATTGAA...CTTAATGCTCTGTGAAGTATAATAGATGAACTGTTCCTCGGATGGGATAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAAAAATACCTCCTTCAATaGCCAAGACTTGGGGACGAT +
Preference number: 5 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKKYLLQ*PRLGDD
Trigger: ATCGTCCCCAAGTCTTGGCAATTGAAGGAGGTATTT...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGGCATTTTCTGGCACTaGTGGCAAATTGAGAAAATT +
Preference number: 5 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSGIFWH*WQIEKI
Trigger: AATTTTCTCAATTTGCCACAAGTGCCAGAAAATGCC...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATTTCCTCTTTAAACCGCATGGAATaGCTCAGGATGGAAATACTA +
Preference number: 5 (lower is better)
Translates to: WTTLKPHGIAQDGNTISSLNRME*LRMEIL
Trigger: TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAA...AGAGGAAATAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TCTACACATGGACAACTCTTAAACCGCATGGAATTGCTCAGGATGGAAATACTATGTAGAAGATGCATCTaGCTTTCAGTTGATAACAGC +
Preference number: 5 (lower is better)
Translates to: STHGQLLNRMELLRMEILCRRCI*LSVDNS
Trigger: GCTGTTATCAACTGAAAGCAAGATGCATCTTCTACA...TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAAGAGTTGTCCATGTGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp ACTGCGCCCAGATGGTTCCATATTTTTCCAATTGCAAATTGTGCTGCTATAAACTTTTCCAATTGCAAATaGTGCTGCTATAAACACGCA +
Preference number: 5 (lower is better)
Translates to: TAPRWFHIFPIANCAAINFSNCK*CCYKHA
Trigger: TGCGTGTTTATAGCAGCACAATTTGCAATTGGAAAA...GTTTATAGCAGCACAATTTGCAATTGGAAAAATATGGAACCATCTGGGCGCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp CATGGAATTGCTCAGGATGGAAATACTATTTCCTCTGTACAATTAGCCATCAAATTAAACCGCATGGAATaGCTCAGGATGGAAATACTA +
Preference number: 5 (lower is better)
Translates to: HGIAQDGNTISSVQLAIKLNRME*LRMEIL
Trigger: TAGTATTTCCATCCTGAGCAATTCCATGCGGTTTAA...TTTGATGGCTAATTGTACAGAGGAAATAGTATTTCCATCCTGAGCAATTCCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp TACTATTTCCTCTGTACAATTAGCCATCAAAGTAGCCACACTTTGCTACTCAAATGTAGAAGATGCATCTaGCTTTCAGTTGATAACAGC +
Preference number: 5 (lower is better)
Translates to: YYFLCTISHQSSHTLLLKCRRCI*LSVDNS
Trigger: GCTGTTATCAACTGAAAGCAAGATGCATCTTCTACA...TTTGAGTAGCAAAGTGTGGCTACTTTGATGGCTAATTGTACAGAGGAAATAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS-3UTR CAA 90 bp AGATCTACTTTTTGTTCTTTAAGGATCCACAATGTTTTCCATCGTGGTTGTACTGGCATTTTCTGGCACTaGTGGCAAATTGAGAAAATT +
Preference number: 5 (lower is better)
Translates to: RSTFCSLRIHNVFHRGCTGIFWH*WQIEKI
Trigger: AATTTTCTCAATTTGCCACAAGTGCCAGAAAATGCC...AGTACAACCACGATGGAAAACATTGTGGATCCTTAAAGAACAAAAAGTAGATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS GCA 72 bp CGCCCGCAGAATGGCAATTGCACCGTCAGGACCACCTaGACGAAGGAGTTGCCGAAGCCACTGAGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: RPQNGNCTVRTT*TKELPKPLSQA
Trigger: GGCCTGGCTCAGTGGCTTCGGCAACTCCTTCGTGCAGGTGGTCCTGACGGTGCAATTGCCATTCTGCGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS CAA 72 bp GGCAATTGCACCGTCAGGACCACCTGCACGAAGGAGTaGCCGAAGCCACTGAGCCAGGCCAGAGCCACGAGC +
Preference number: 6 (lower is better)
Translates to: GNCTVRTTCTKE*PKPLSQARATS
Trigger: GCTCGTGGCTCTGGCCTGGCTCAGTGGCTTCGGCAACTCCTTCGTGCAGGTGGTCCTGACGGTGCAATTGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS GCA 72 bp ATCGTTGCAGGCACGCACTGTCTGTATCCTCACCACTaGCGTCCTGGGCAGAAACGCCCACCAGGACCCCTC +
Preference number: 6 (lower is better)
Translates to: IVAGTHCLYPHH*RPGQKRPPGPL
Trigger: GAGGGGTCCTGGTGGGCGTTTCTGCCCAGGACGGCAGTGGTGAGGATACAGACAGTGCGTGCCTGCAACGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS CAA 90 bp ACTGCCGTCCTGGGCAGAAACGCCCACCAGGACCCCTCTTGGAACTaGCTACCTGCCTCTCTGCAGGCAGTTTCAACCCCTCACTCACCC +
Preference number: 6 (lower is better)
Translates to: TAVLGRNAHQDPSWN*LPASLQAVSTPHSP
Trigger: GGGTGAGTGAGGGGTTGAAACTGCCTGCAGAGAGGCAGGTAGCAAGTTCCAAGAGGGGTCCTGGTGGGCGTTTCTGCCCAGGACGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS CAA 90 bp CCTCACCACTGCCGTCCTGGGCAGAAACGCCCACCAGGACCCCTCTaGGAACTTGCTACCTGCCTCTCTGCAGGCAGTTTCAACCCCTCA +
Preference number: 6 (lower is better)
Translates to: PHHCRPGQKRPPGPL*ELATCLSAGSFNPS
Trigger: TGAGGGGTTGAAACTGCCTGCAGAGAGGCAGGTAGCAAGTTCCAAGAGGGGTCCTGGTGGGCGTTTCTGCCCAGGACGGCAGTGGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS TCA 72 bp GGCTGTGGAGTTGAGGATCCACCCGGGATGCCAGGATaGTGGCGACGTTCCCCAACATGGCCAGCACATAGG +
Preference number: 6 (lower is better)
Translates to: GCGVEDPPGMPG*WRRSPTWPAHR
Trigger: CCTATGTGCTGGCCATGTTGGGGAACGTCGCCATCATCCTGGCATCCCGGGTGGATCCTCAACTCCACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS CCA 72 bp GCCGTCCTGGGCAGAAACGCCCACCAGGACCCCTCTTaGAACTTGCTACCTGCCTCTCTGCAGGCAGTTTCA +
Preference number: 6 (lower is better)
Translates to: AVLGRNAHQDPS*NLLPASLQAVS
Trigger: TGAAACTGCCTGCAGAGAGGCAGGTAGCAAGTTCCAAGAGGGGTCCTGGTGGGCGTTTCTGCCCAGGACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS CCA 72 bp AGGCACGCACTGTCTGTATCCTCACCACTGCCGTCCTaGGCAGAAACGCCCACCAGGACCCCTCTTGGAACT +
Preference number: 6 (lower is better)
Translates to: RHALSVSSPLPS*AETPTRTPLGT
Trigger: AGTTCCAAGAGGGGTCCTGGTGGGCGTTTCTGCCCAGGACGGCAGTGGTGAGGATACAGACAGTGCGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS GCA 72 bp TGGGCAGAAACGCCCACCAGGACCCCTCTTGGAACTTaGTACCTGCCTCTCTGCAGGCAGTTTCAACCCCTC +
Preference number: 6 (lower is better)
Translates to: WAETPTRTPLGT*YLPLCRQFQPL
Trigger: GAGGGGTTGAAACTGCCTGCAGAGAGGCAGGTAGCAAGTTCCAAGAGGGGTCCTGGTGGGCGTTTCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS GCA 72 bp AAGTTGTTCAGCACCTGCCGCCCGCAGAATGGCAATTaGACCGTCAGGACCACCTGCACGAAGGAGTTGCCG +
Preference number: 6 (lower is better)
Translates to: KLFSTCRPQNGN*TVRTTCTKELP
Trigger: CGGCAACTCCTTCGTGCAGGTGGTCCTGACGGTGCAATTGCCATTCTGCGGGCGGCAGGTGCTGAACAACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS CCA 72 bp CTAGAAGGAGTCTGCTGTCCGTTGCAACAGGCTTGCTaGGGAGACTCAGGGTTTCCCGGACTCTCCCTTGGC +
Preference number: 6 (lower is better)
Translates to: LEGVCCPLQQAC*GDSGFPGLSLG
Trigger: GCCAAGGGAGAGTCCGGGAAACCCTGAGTCTCCCCAGCAAGCCTGTTGCAACGGACAGCAGACTCCTTCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS CAA 72 bp CTTGCTGGGGAGACTCAGGGTTTCCCGGACTCTCCCTaGGCAGTACGTGAGGTCGGTGGAACTGCCTTAACC +
Preference number: 6 (lower is better)
Translates to: LAGETQGFPDSP*AVREVGGTALT
Trigger: GGTTAAGGCAGTTCCACCGACCTCACGTACTGCCAAGGGAGAGTCCGGGAAACCCTGAGTCTCCCCAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS CAA 72 bp CTGGGCAGAAACGCCCACCAGGACCCCTCTTGGAACTaGCTACCTGCCTCTCTGCAGGCAGTTTCAACCCCT +
Preference number: 6 (lower is better)
Translates to: LGRNAHQDPSWN*LPASLQAVSTP
Trigger: AGGGGTTGAAACTGCCTGCAGAGAGGCAGGTAGCAAGTTCCAAGAGGGGTCCTGGTGGGCGTTTCTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS CAA 90 bp TGCAACAGGCTTGCTGGGGAGACTCAGGGTTTCCCGGACTCTCCCTaGGCAGTACGTGAGGTCGGTGGAACTGCCTTAACCTTAGTCCCC +
Preference number: 6 (lower is better)
Translates to: CNRLAGETQGFPDSP*AVREVGGTALTLVP
Trigger: GGGGACTAAGGTTAAGGCAGTTCCACCGACCTCACGTACTGCCAAGGGAGAGTCCGGGAAACCCTGAGTCTCCCCAGCAAGCCTGTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS TCA 72 bp GACTCAGGGTTTCCCGGACTCTCCCTTGGCAGTACGTaGGGTCGGTGGAACTGCCTTAACCTTAGTCCCCCA +
Preference number: 6 (lower is better)
Translates to: DSGFPGLSLGST*GRWNCLNLSPP
Trigger: TGGGGGACTAAGGTTAAGGCAGTTCCACCGACCTCACGTACTGCCAAGGGAGAGTCCGGGAAACCCTGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS GCA 72 bp AAACGCCCACCAGGACCCCTCTTGGAACTTGCTACCTaGCTCTCTGCAGGCAGTTTCAACCCCTCACTCACC +
Preference number: 6 (lower is better)
Translates to: KRPPGPLLELAT*LSAGSFNPSLT
Trigger: GGTGAGTGAGGGGTTGAAACTGCCTGCAGAGAGGCAGGTAGCAAGTTCCAAGAGGGGTCCTGGTGGGCGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS CAA 72 bp CAGTCTAGAAGGAGTCTGCTGTCCGTTGCAACAGGCTaGCTGGGGAGACTCAGGGTTTCCCGGACTCTCCCT +
Preference number: 6 (lower is better)
Translates to: QSRRSLLSVATG*LGRLRVSRTLP
Trigger: AGGGAGAGTCCGGGAAACCCTGAGTCTCCCCAGCAAGCCTGTTGCAACGGACAGCAGACTCCTTCTAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS CAA 72 bp AAAGTTGTTCAGCACCTGCCGCCCGCAGAATGGCAATaGCACCGTCAGGACCACCTGCACGAAGGAGTTGCC +
Preference number: 6 (lower is better)
Translates to: KVVQHLPPAEWQ*HRQDHLHEGVA
Trigger: GGCAACTCCTTCGTGCAGGTGGTCCTGACGGTGCAATTGCCATTCTGCGGGCGGCAGGTGCTGAACAACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS CAA 90 bp CTCACAGAAAAAGTTGTTCAGCACCTGCCGCCCGCAGAATGGCAATaGCACCGTCAGGACCACCTGCACGAAGGAGTTGCCGAAGCCACT +
Preference number: 6 (lower is better)
Translates to: LTEKVVQHLPPAEWQ*HRQDHLHEGVAEAT
Trigger: AGTGGCTTCGGCAACTCCTTCGTGCAGGTGGTCCTGACGGTGCAATTGCCATTCTGCGGGCGGCAGGTGCTGAACAACTTTTTCTGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS GCA 72 bp AGTCTAGAAGGAGTCTGCTGTCCGTTGCAACAGGCTTaGTGGGGAGACTCAGGGTTTCCCGGACTCTCCCTT +
Preference number: 6 (lower is better)
Translates to: SLEGVCCPLQQA*WGDSGFPGLSL
Trigger: AAGGGAGAGTCCGGGAAACCCTGAGTCTCCCCAGCAAGCCTGTTGCAACGGACAGCAGACTCCTTCTAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS CCA 72 bp GCACCAACACGAAGAAGGCCACCAGCACAGCCAGTATaGTGTCATTCACAGCGGTGTCAGCACACGACAGCT +
Preference number: 6 (lower is better)
Translates to: APTRRRPPAQPV*CHSQRCQHTTA
Trigger: AGCTGTCGTGTGCTGACACCGCTGTGAATGACACCATACTGGCTGTGCTGGTGGCCTTCTTCGTGTTGGTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS CAA 90 bp GATTATTCTCAGTCTAGAAGGAGTCTGCTGTCCGTTGCAACAGGCTaGCTGGGGAGACTCAGGGTTTCCCGGACTCTCCCTTGGCAGTAC +
Preference number: 6 (lower is better)
Translates to: DYSQSRRSLLSVATG*LGRLRVSRTLPWQY
Trigger: GTACTGCCAAGGGAGAGTCCGGGAAACCCTGAGTCTCCCCAGCAAGCCTGTTGCAACGGACAGCAGACTCCTTCTAGACTGAGAATAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS CAA 90 bp ACTGGGTTGCCACCTGCTGATTCGTGGGTCCTTTCGACTGCACCATaGGCTTCTCACCTCCTACAATCGCTCAAGCATTGCACACCTTCC +
Preference number: 6 (lower is better)
Translates to: TGLPPADSWVLSTAP*ASHLLQSLKHCTPS
Trigger: GGAAGGTGTGCAATGCTTGAGCGATTGTAGGAGGTGAGAAGCCAATGGTGCAGTCGAAAGGACCCACGAATCAGCAGGTGGCAACCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS CAA 90 bp TCCTCCCTCTTGCATCCACTCTTCCTTTCCCAGGTGATAGCCTGTTaGATTCTCCTTACCTCTGTGGAGACGCTGGGATGCGGAAGGGTC +
Preference number: 6 (lower is better)
Translates to: SSLLHPLFLSQVIAC*ILLTSVETLGCGRV
Trigger: GACCCTTCCGCATCCCAGCGTCTCCACAGAGGTAAGGAGAATCAAACAGGCTATCACCTGGGAAAGGAAGAGTGGATGCAAGAGGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS TCA 72 bp CCATTGCTGTTAGGAAGCAACTGGGTTGCCACCTGCTaGTTCGTGGGTCCTTTCGACTGCACCATTGGCTTC +
Preference number: 6 (lower is better)
Translates to: PLLLGSNWVATC*FVGPFDCTIGF
Trigger: GAAGCCAATGGTGCAGTCGAAAGGACCCACGAATCAGCAGGTGGCAACCCAGTTGCTTCCTAACAGCAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS GCA 72 bp ACACAATGCTGTGATCCCACCACAATGTTGCATCGTTaGAGGCACGCACTGTCTGTATCCTCACCACTGCCG +
Preference number: 6 (lower is better)
Translates to: TQCCDPTTMLHR*RHALSVSSPLP
Trigger: CGGCAGTGGTGAGGATACAGACAGTGCGTGCCTGCAACGATGCAACATTGTGGTGGGATCACAGCATTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS TCA 72 bp CACCTTCTTAGGCTGCTGATTGTATCATGTTCACGCTaGATTCCCGCAGTTTCTTCTGGGGGCTGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: HLLRLLIVSCSR*IPAVSSGGCWQ
Trigger: CTGCCAGCAGCCCCCAGAAGAAACTGCGGGAATTCAGCGTGAACATGATACAATCAGCAGCCTAAGAAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641613.1
CDS TCA 72 bp GGGGATGTTATGCTGCTGATTGTATCATGTTCACGCTaGATTCCCGCAGTTTCTTCTGGGGGCTGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: GDVMLLIVSCSR*IPAVSSGGCWQ
Trigger: CTGCCAGCAGCCCCCAGAAGAAACTGCGGGAATTCAGCGTGAACATGATACAATCAGCAGCATAACATCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641527.1
CDS CAA 90 bp CAGGTAGAGCGAAGCGTGCTGCAGCTCCCATCACCGTCAGAGTGTTaGATTTCTCTCTACATCCACATCGACAAGGAATTGTCCACCTTC +
Preference number: 6 (lower is better)
Translates to: QVERSVLQLPSPSEC*ISLYIHIDKELSTF
Trigger: GAAGGTGGACAATTCCTTGTCGATGTGGATGTAGAGAGAAATCAAACACTCTGACGGTGATGGGAGCTGCAGCACGCTTCGCTCTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS TCA 72 bp CTCAAGAGTTACCTGCTGATTGTATCATGTTCACGCTaGATTCCCGCAGTTTCTTCTGGGGGCTGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: LKSYLLIVSCSR*IPAVSSGGCWQ
Trigger: CTGCCAGCAGCCCCCAGAAGAAACTGCGGGAATTCAGCGTGAACATGATACAATCAGCAGGTAACTCTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS TCA 72 bp TCACTGACCTCTAACCCCCTTTTTGACATTGTGAACTaGGGCATCCCAAATTTCACCTGGCAGCCATCCCCC +
Preference number: 6 (lower is better)
Translates to: SLTSNPLFDIVN*GIPNFTWQPSP
Trigger: GGGGGATGGCTGCCAGGTGAAATTTGGGATGCCTCAGTTCACAATGTCAAAAAGGGGGTTAGAGGTCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS CAA 72 bp TCAACACCCACACAATGCTGTGATCCCACCACAATGTaGCATCGTTGCAGGCACGCACTGTCTGTATCCTCA +
Preference number: 6 (lower is better)
Translates to: STPTQCCDPTTM*HRCRHALSVSS
Trigger: TGAGGATACAGACAGTGCGTGCCTGCAACGATGCAACATTGTGGTGGGATCACAGCATTGTGTGGGTGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS CAA 72 bp TTGCATCCACTCTTCCTTTCCCAGGTGATAGCCTGTTaGATTCTCCTTACCTCTGTGGAGACGCTGGGATGC +
Preference number: 6 (lower is better)
Translates to: LHPLFLSQVIAC*ILLTSVETLGC
Trigger: GCATCCCAGCGTCTCCACAGAGGTAAGGAGAATCAAACAGGCTATCACCTGGGAAAGGAAGAGTGGATGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS CAA 90 bp TTAAAGAATTCAACACCCACACAATGCTGTGATCCCACCACAATGTaGCATCGTTGCAGGCACGCACTGTCTGTATCCTCACCACTGCCG +
Preference number: 6 (lower is better)
Translates to: LKNSTPTQCCDPTTM*HRCRHALSVSSPLP
Trigger: CGGCAGTGGTGAGGATACAGACAGTGCGTGCCTGCAACGATGCAACATTGTGGTGGGATCACAGCATTGTGTGGGTGTTGAATTCTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS CCA 72 bp CCATGGAATTTTGAGCACAGGGAGAAAGCTCTTGATTaGCGTGAGAAAGGTAGCCCCTGGAATTGTCTACGG +
Preference number: 6 (lower is better)
Translates to: PWNFEHREKALD*REKGSPWNCLR
Trigger: CCGTAGACAATTCCAGGGGCTACCTTTCTCACGCCAATCAAGAGCTTTCTCCCTGTGCTCAAAATTCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS CAA 72 bp ACCATTGGCTTCTCACCTCCTACAATCGCTCAAGCATaGCACACCTTCCAGTTCCTGATGGGGATGTTATGC +
Preference number: 6 (lower is better)
Translates to: TIGFSPPTIAQA*HTFQFLMGMLC
Trigger: GCATAACATCCCCATCAGGAACTGGAAGGTGTGCAATGCTTGAGCGATTGTAGGAGGTGAGAAGCCAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS CAA 72 bp CGAAGCGTGCTGCAGCTCCCATCACCGTCAGAGTGTTaGATTTCTCTCTACATCCACATCGACAAGGAATTG +
Preference number: 6 (lower is better)
Translates to: RSVLQLPSPSEC*ISLYIHIDKEL
Trigger: CAATTCCTTGTCGATGTGGATGTAGAGAGAAATCAAACACTCTGACGGTGATGGGAGCTGCAGCACGCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS CAA 90 bp GTTCCTGGCTCCTACAGAAGACTTGCTTTAGGACTGAAGGCTATATaGCAGTCTGTGTTGGCCTTAGTCGCGGAGGGACATTTAAGGATG +
Preference number: 6 (lower is better)
Translates to: VPGSYRRLALGLKAI*QSVLALVAEGHLRM
Trigger: CATCCTTAAATGTCCCTCCGCGACTAAGGCCAACACAGACTGCAATATAGCCTTCAGTCCTAAAGCAAGTCTTCTGTAGGAGCCAGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS CAA 90 bp TTCGACTGCACCATTGGCTTCTCACCTCCTACAATCGCTCAAGCATaGCACACCTTCCAGTTCCTGATGGGGATGTTATGCTCCATGATA +
Preference number: 6 (lower is better)
Translates to: FDCTIGFSPPTIAQA*HTFQFLMGMLCSMI
Trigger: TATCATGGAGCATAACATCCCCATCAGGAACTGGAAGGTGTGCAATGCTTGAGCGATTGTAGGAGGTGAGAAGCCAATGGTGCAGTCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS TCA 72 bp ACCGAAGTTAAAGAATTCAACACCCACACAATGCTGTaGTCCCACCACAATGTTGCATCGTTGCAGGCACGC +
Preference number: 6 (lower is better)
Translates to: TEVKEFNTHTML*SHHNVASLQAR
Trigger: GCGTGCCTGCAACGATGCAACATTGTGGTGGGATCACAGCATTGTGTGGGTGTTGAATTCTTTAACTTCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS TCA 72 bp GAAGCGTGCTGCAGCTCCCATCACCGTCAGAGTGTTTaGTTTCTCTCTACATCCACATCGACAAGGAATTGT +
Preference number: 6 (lower is better)
Translates to: EACCSSHHRQSV*FLSTSTSTRNC
Trigger: ACAATTCCTTGTCGATGTGGATGTAGAGAGAAATCAAACACTCTGACGGTGATGGGAGCTGCAGCACGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS CAA 72 bp CTTGCTTTAGGACTGAAGGCTATATTGCAGTCTGTGTaGGCCTTAGTCGCGGAGGGACATTTAAGGATGGAC +
Preference number: 6 (lower is better)
Translates to: LALGLKAILQSV*ALVAEGHLRMD
Trigger: GTCCATCCTTAAATGTCCCTCCGCGACTAAGGCCAACACAGACTGCAATATAGCCTTCAGTCCTAAAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS CAA 72 bp TCCTACAGAAGACTTGCTTTAGGACTGAAGGCTATATaGCAGTCTGTGTTGGCCTTAGTCGCGGAGGGACAT +
Preference number: 6 (lower is better)
Translates to: SYRRLALGLKAI*QSVLALVAEGH
Trigger: ATGTCCCTCCGCGACTAAGGCCAACACAGACTGCAATATAGCCTTCAGTCCTAAAGCAAGTCTTCTGTAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS GCA 72 bp TCAGCACCGAAGTTAAAGAATTCAACACCCACACAATaGTGTGATCCCACCACAATGTTGCATCGTTGCAGG +
Preference number: 6 (lower is better)
Translates to: SAPKLKNSTPTQ*CDPTTMLHRCR
Trigger: CCTGCAACGATGCAACATTGTGGTGGGATCACAGCATTGTGTGGGTGTTGAATTCTTTAACTTCGGTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS CCA 72 bp AGTAAAAGCAGCACAATTCTAGGTCCTGTGAGTCTCTaGAGTGGAAGAGCCAAGGTATACGTTACTTCAGCC +
Preference number: 6 (lower is better)
Translates to: SKSSTILGPVSL*SGRAKVYVTSA
Trigger: GGCTGAAGTAACGTATACCTTGGCTCTTCCACTCCAGAGACTCACAGGACCTAGAATTGTGCTGCTTTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS TCA 72 bp TTATCTCTAACGAGCTCAAGATGCCTGTCAAAACAGTaGGCTGTGGCCGAGCAAAGTCAAGCTAGCACATTT +
Preference number: 6 (lower is better)
Translates to: LSLTSSRCLSKQ*AVAEQSQASTF
Trigger: AAATGTGCTAGCTTGACTTTGCTCGGCCACAGCTCACTGTTTTGACAGGCATCTTGAGCTCGTTAGAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS TCA 72 bp TGCAACAGGTGTTCCCTGCTGCCCCAGTTGATGTTCTaGAGAACTCTACTGTTACTGGAAAACAACTCAAAC +
Preference number: 6 (lower is better)
Translates to: CNRCSLLPQLMF*RTLLLLENNSN
Trigger: GTTTGAGTTGTTTTCCAGTAACAGTAGAGTTCTTCAGAACATCAACTGGGGCAGCAGGGAACACCTGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS TCA 72 bp CTACAATCGCTCAAGCATTGCACACCTTCCAGTTCCTaGTGGGGATGTTATGCTGCTGATTGTATCATGTTC +
Preference number: 6 (lower is better)
Translates to: LQSLKHCTPSSS*WGCYAADCIMF
Trigger: GAACATGATACAATCAGCAGCATAACATCCCCATCAGGAACTGGAAGGTGTGCAATGCTTGAGCGATTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641527.1
CDS CAA 72 bp GGCTTGAGTGACATTCCAATTTCCTGCACAATTTCTTaGCCGAGCAGCTGTCACCTCTCAGTGATAGAAAAC +
Preference number: 6 (lower is better)
Translates to: GLSDIPISCTIS*PSSCHLSVIEN
Trigger: GTTTTCTATCACTGAGAGGTGACAGCTGCTCGGCAAAGAAATTGTGCAGGAAATTGGAATGTCACTCAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS CAA 90 bp TACAGAAGACTTGCTTTAGGACTGAAGGCTATATTGCAGTCTGTGTaGGCCTTAGTCGCGGAGGGACATTTAAGGATGGACTTACTAGAA +
Preference number: 6 (lower is better)
Translates to: YRRLALGLKAILQSV*ALVAEGHLRMDLLE
Trigger: TTCTAGTAAGTCCATCCTTAAATGTCCCTCCGCGACTAAGGCCAACACAGACTGCAATATAGCCTTCAGTCCTAAAGCAAGTCTTCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS TCA 72 bp TTACCATTTACTGGAACCCAACCCTCTGAGCAAGTCTaGGAGATTATTCTCAGTCTAGAAGGAGTCTGCTGT +
Preference number: 6 (lower is better)
Translates to: LPFTGTQPSEQV*EIILSLEGVCC
Trigger: ACAGCAGACTCCTTCTAGACTGAGAATAATCTCTCAGACTTGCTCAGAGGGTTGGGTTCCAGTAAATGGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641149.1
ENST00000641527.1
ENST00000641613.1
CDS TCA 72 bp AAAAACGTAAGAACCCGTCGCTCAAGAGTTACCTGCTaGTTGTATCATGTTCACGCTGAATTCCCGCAGTTT +
Preference number: 6 (lower is better)
Translates to: KNVRTRRSRVTC*LYHVHAEFPQF
Trigger: AAACTGCGGGAATTCAGCGTGAACATGATACAATCAGCAGGTAACTCTTGAGCGACGGGTTCTTACGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS TCA 72 bp AGACTGCCCTCTAGGGCTAGGTTTTATCTGATGGCTTaGGTGACATTCCAATTTCCTGCACAATTTCTTTGC +
Preference number: 6 (lower is better)
Translates to: RLPSRARFYLMA*VTFQFPAQFLC
Trigger: GCAAAGAAATTGTGCAGGAAATTGGAATGTCACTCAAGCCATCAGATAAAACCTAGCCCTAGAGGGCAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS CAA 72 bp TGTTTGATTTCTCTCTACATCCACATCGACAAGGAATaGTCCACCTTCTTAGGCTTTCCCATTTTGGGAGGT +
Preference number: 6 (lower is better)
Translates to: CLISLYIHIDKE*STFLGFPILGG
Trigger: ACCTCCCAAAATGGGAAAGCCTAAGAAGGTGGACAATTCCTTGTCGATGTGGATGTAGAGAGAAATCAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS CAA 90 bp TTATCTGATGGCTTGAGTGACATTCCAATTTCCTGCACAATTTCTTaGCCGAGCAGCTGTCACCTCTCAGTGATAGAAAACAGCCAATTT +
Preference number: 6 (lower is better)
Translates to: LSDGLSDIPISCTIS*PSSCHLSVIENSQF
Trigger: AAATTGGCTGTTTTCTATCACTGAGAGGTGACAGCTGCTCGGCAAAGAAATTGTGCAGGAAATTGGAATGTCACTCAAGCCATCAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS TCA 72 bp ACCACTCACTGTGAGCCAGGTACTGTAATAATAACTTaGTGTTGCCTTAATATCTCAGCAAGGTCCATGTTT +
Preference number: 6 (lower is better)
Translates to: TTHCEPGTVIIT*CCLNISARSMF
Trigger: AAACATGGACCTTGCTGAGATATTAAGGCAACATCAAGTTATTATTACAGTACCTGGCTCACAGTGAGTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641149.1
CDS TCA 72 bp TGCCAAGACTTGGGGACGATAGAGACATTAAGTATGTaGGAAGAATACCTCACGAATGACAATTATGTTCCA +
Preference number: 6 (lower is better)
Translates to: CQDLGTIETLSM*EEYLTNDNYVP
Trigger: TGGAACATAATTGTCATTCGTGAGGTATTCTTCTCACATACTTAATGTCTCTATCGTCCCCAAGTCTTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641149.1
ENST00000641527.1
CDS GCA 72 bp TGGCCGCAACTAAACCATTTAATATTCCTGAACTTCTaGATCTCACGAATGACAATTATGTTCCAGGTAGAG +
Preference number: 6 (lower is better)
Translates to: WPQLNHLIFLNF*ISRMTIMFQVE
Trigger: CTCTACCTGGAACATAATTGTCATTCGTGAGATGCAGAAGTTCAGGAATATTAAATGGTTTAGTTGCGGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641613.1