RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR2A5 (Homo sapiens)

Ensembl gene IDs: ENSG00000221836, ENSG00000284896

Ensembl transcript IDs: ENST00000641693.1, ENST00000641779.1, ENST00000642152.1, ENST00000645588.1

Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAAGCAGATCCTGGGTAGGGGTGGGACCTGGGAGTAGGAGTTCATaGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCT +
Preference number: 1 (lower is better)
Translates to: ESRSWVGVGPGSRSS*HFAPLLHHTAQRLS
Trigger: AGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCCATGAACTCCTACTCCCAGGTCCCACCCCTACCCAGGATCTGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CCA 90 bp CTCTCTCCCTCCCTCTTCTCTCATCTAGAAGCTCAGGGGTTGTCTTaGCCCAGCTCTTTGGGCTTCCTATCCAGACCTGGATCTTACGTA +
Preference number: 1 (lower is better)
Translates to: LSPSLFSHLEAQGLS*PSSLGFLSRPGSYV
Trigger: TACGTAAGATCCAGGTCTGGATAGGAAGCCCAAAGAGCTGGGCCAAGACAACCCCTGAGCTTCTAGATGAGAGAAGAGGGAGGGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR TCA 90 bp CCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTTGTaGTCTGCATGGTACTCCACGTTTAGGGATAGAATCCAATCAATA +
Preference number: 1 (lower is better)
Translates to: PLLHHTAQRLSACAL*SAWYSTFRDRIQSI
Trigger: TATTGATTGGATTCTATCCCTAAACGTGGAGTACCATGCAGATCACAAAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR TCA 90 bp GCAGGGTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATaGGGCCATGTGATTTTGCAGACAGGCATTAGGAGGGAGTTACTA +
Preference number: 1 (lower is better)
Translates to: AGCLSFRLSLWGNAL*GHVILQTGIRRELL
Trigger: TAGTAACTCCCTCCTAATGCCTGTCTGCAAAATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACACCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR TCA 90 bp GCATTAGGAGGGAGTTACTATTGGAAAATGATGATGCTGCTAATGTaGGTGTTTCTACTCTTCCCAAAGGTGGTAATGAATCCTCCAAAG +
Preference number: 1 (lower is better)
Translates to: ALGGSYYWKMMMLLM*VFLLFPKVVMNPPK
Trigger: CTTTGGAGGATTCATTACCACCTTTGGGAAGAGTAGAAACACTCACATTAGCAGCATCATCATTTTCCAATAGTAACTCCCTCCTAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR TCA 90 bp TTCCCAGTAGAGGGCTGCTTAACCAAGGTCAGTATTTATTCTGTGTaGTTACAAGTACTCTCTTATAGTAGCATATGGTATGGGATTACC +
Preference number: 1 (lower is better)
Translates to: FPVEGCLTKVSIYSV*LQVLSYSSIWYGIT
Trigger: GGTAATCCCATACCATATGCTACTATAAGAGAGTACTTGTAATCACACAGAATAAATACTGACCTTGGTTAAGCAGCCCTCTACTGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR TCA 90 bp TCTTTATCAAGACTTGACATGTTCTTGGTTCTAAGCGGTGGTCTATaGTGTTACATCAAGCTGTCAGTTTCCCTTGATGCTTTCTTCCTT +
Preference number: 1 (lower is better)
Translates to: SLSRLDMFLVLSGGL*CYIKLSVSLDAFFL
Trigger: AAGGAAGAAAGCATCAAGGGAAACTGACAGCTTGATGTAACATCATAGACCACCGCTTAGAACCAAGAACATGTCAAGTCTTGATAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR TCA 90 bp ATCAATTGTTCATTCCTGAACATGCACAAGGGACATCATCAGAAGTaGATTTATTTTCCAGTTGTTGATATTTTGGGCTGCTTCTCTTGG +
Preference number: 1 (lower is better)
Translates to: INCSFLNMHKGHHQK*IYFPVVDILGCFSW
Trigger: CCAAGAGAAGCAGCCCAAAATATCAACAACTGGAAAATAAATTCACTTCTGATGATGTCCCTTGTGCATGTTCAGGAATGAACAATTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR TCA 90 bp AATCACCGTAATGATAAATTGTCACCTACACCCGGCTTTGCGATCTaGATTATGAAAAAGGTAACTATCCCTAATAACATTCTCTCATAT +
Preference number: 1 (lower is better)
Translates to: NHRNDKLSPTPGFAI*IMKKVTIPNNILSY
Trigger: ATATGAGAGAATGTTATTAGGGATAGTTACCTTTTTCATAATTCAGATCGCAAAGCCGGGTGTAGGTGACAATTTATCATTACGGTGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CCA 90 bp GTAAAAATAGAAAAGGTACAGGCAGCAGATAATGTAATAACATCATaGGTCATACAGTTGAATTCACACAATACTACAAGGGTTGAGAGA +
Preference number: 1 (lower is better)
Translates to: VKIEKVQAADNVITS*VIQLNSHNTTRVER
Trigger: TCTCTCAACCCTTGTAGTATTGTGTGAATTCAACTGTATGACCCATGATGTTATTACATTATCTGCTGCCTGTACCTTTTCTATTTTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR GCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATACTTTGCACCTCTGCTaGACCACACGGCTCAGCGCC +
Preference number: 2 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDTLHLC*TTRLSA
Trigger: GGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGT...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CAA 90 bp TCTCTCTCCCTCCCTCTTCTCTCATCTAGAAGCTCAGGGGTTGTCTaGGCCCAGCTCTTTGGGCTTCCTATCCAGACCTGGATCTTACGT +
Preference number: 2 (lower is better)
Translates to: SLSLPLLSSRSSGVV*AQLFGLPIQTWILR
Trigger: ACGTAAGATCCAGGTCTGGATAGGAAGCCCAAAGAGCTGGGCCAAGACAACCCCTGAGCTTCTAGATGAGAGAAGAGGGAGGGAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR GCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGACTTTGCACCTCTGCTaGACCACACGGCTCAGCGCC +
Preference number: 2 (lower is better)
Translates to: RKLERTKPQKNRKQILGRTLHLC*TTRLSA
Trigger: GGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGT...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR TCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTCAGAAATCTAAGAGATaGGACTGTAAGGCATTTACA +
Preference number: 2 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLQKSKR*DCKAFT
Trigger: TGTAAATGCCTTACAGTCTCATCTCTTAGATTTCTG...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR GCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCCTCAGCTTGCACCTGTaGTGGGTTCCCCCTTTCTCA +
Preference number: 2 (lower is better)
Translates to: SSDPPTSISSVFGITCASLSLHL*WVPPFS
Trigger: TGAGAAAGGGGGAACCCAGCACAGGTGCAAGCTGAG...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CAA 90 bp ATGATCACTGAGAACAGCAGGGTGTCTCTCGTTCAGATTGTCCCTTaGGGGCAATGCCTTATGAGGCCATGTGATTTTGCAGACAGGCAT +
Preference number: 2 (lower is better)
Translates to: MITENSRVSLVQIVP*GQCLMRPCDFADRH
Trigger: ATGCCTGTCTGCAAAATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACACCCTGCTGTTCTCAGTGATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR GCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCGAGTTCATGGCACTTTaGACCTCTGCTGCACCACAC +
Preference number: 2 (lower is better)
Translates to: SSDPPTSISSVFGITCASEFMAL*TSAAPH
Trigger: GTGTGGTGCAGCAGAGGTGCAAAGTGCCATGAACTC...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CAA 90 bp CTCTTCTCTCATCTAGAAGCTCAGGGGTTGTCTTGGCCCAGCTCTTaGGGCTTCCTATCCAGACCTGGATCTTACGTAAATGGTTTAGAA +
Preference number: 2 (lower is better)
Translates to: LFSHLEAQGLSWPSS*GFLSRPGSYVNGLE
Trigger: TTCTAAACCATTTACGTAAGATCCAGGTCTGGATAGGAAGCCCAAAGAGCTGGGCCAAGACAACCCCTGAGCTTCTAGATGAGAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR TCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCTGGGGCAATGCCTTATaGGGCCATGTGATTTTGCAG +
Preference number: 2 (lower is better)
Translates to: SSDPPTSISSVFGITCASWGNAL*GHVILQ
Trigger: CTGCAAAATCACATGGCCTCATAAGGCATTGCCCCA...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR GCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCGGCACTTTGCACCTCTaGTGCACCACACGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: PNDRKKTRIIGKMITENSGTLHL*CTTRLS
Trigger: GCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR GCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATTTCCCAGTAGAGGGCTaGTTAACCAAGGTCAGTATT +
Preference number: 2 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDFPVEG*LTKVSI
Trigger: AATACTGACCTTGGTTAAGCAGCCCTCTACTGGGAA...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR GCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATTTTTGTTCCAGACTCTaGCCCATCATGTGGATGTTG +
Preference number: 2 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDFCSRL*PIMWML
Trigger: CAACATCCACATGATGGGGCAGAGTCTGGAACAAAA...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCCTCTGCCCCATCATGTaGATGTTGAGTCTAACCCCT +
Preference number: 2 (lower is better)
Translates to: SSDPPTSISSVFGITCASLCPIM*MLSLTP
Trigger: AGGGGTTAGACTCAACATCCACATGATGGGGCAGAG...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCACCTTCAACCTCCTTTaGTGGAGACCTTCCCCAATA +
Preference number: 2 (lower is better)
Translates to: SSDPPTSISSVFGITCASTFNLL*WRPSPI
Trigger: TATTGGGGAAGGTCTCCACCAAAGGAGGTTGAAGGT...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CAA 90 bp TCTTCAGCTAGCTACATAGGGAAGCAGTACAGCACAGTACATTTTTaGGTCTTCATTAGTAAGCAAAGGAAGTCAGTCCCTCCCACCCTC +
Preference number: 2 (lower is better)
Translates to: SSASYIGKQYSTVHF*VFISKQRKSVPPTL
Trigger: GAGGGTGGGAGGGACTGACTTCCTTTGCTTACTAATGAAGACCAAAAAATGTACTGTGCTGTACTGCTTCCCTATGTAGCTAGCTGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR TCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATATGAATTATACCCCCTaGTTTTTCCACTGTACCCTA +
Preference number: 2 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDMNYTP*FFHCTL
Trigger: TAGGGTACAGTGGAAAAATCAGGGGGTATAATTCAT...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR TCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCTATAAGGCACCTAGCTaGAACCTTGTTAGCCACATC +
Preference number: 2 (lower is better)
Translates to: SSDPPTSISSVFGITCASYKAPS*NLVSHI
Trigger: GATGTGGCTAACAAGGTTTCAGCTAGGTGCCTTATA...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR GCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCGGCTCAGCGCCTGTCTaGATGTGCTTTGTGATCTGC +
Preference number: 2 (lower is better)
Translates to: PNDRKKTRIIGKMITENSGSAPV*MCFVIC
Trigger: GCAGATCACAAAGCACATGCAGACAGGCGCTGAGCC...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR GCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATACCTACACCCGGCTTTaGGATCTGAATTATGAAAAA +
Preference number: 2 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDTYTRL*DLNYEK
Trigger: TTTTTCATAATTCAGATCGCAAAGCCGGGTGTAGGT...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR GCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATAAAGAGTTCCCCCTTTaGTTCTTTCTTTCATGGAAG +
Preference number: 2 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDKEFPL*FFLSWK
Trigger: CTTCCATGAAAGAAAGAAGCAAAGGGGGAACTCTTT...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR GCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCACTATGTTTGCCTCCTaGAAGATTCTCGATGGGACA +
Preference number: 2 (lower is better)
Translates to: SSDPPTSISSVFGITCASTMFAS*KILDGT
Trigger: TGTCCCATCGAGAATCTTGCAGGAGGCAAACATAGT...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATTCCTACAAATCTCATTaGGAGCAAATCTTCAACCCT +
Preference number: 2 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDSYKSH*EQIFNP
Trigger: AGGGTTGAAGATTTGCTCCCAATGAGATTTGTAGGA...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCCATTTGGAGAGGGGGTaGGAGGAAAGAGTTCCCCCT +
Preference number: 2 (lower is better)
Translates to: PNDRKKTRIIGKMITENSHLERG*EERVPP
Trigger: AGGGGGAACTCTTTCCTCCCACCCCCTCTCCAAATG...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR TCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATTGGTGCAGAATTAAGTaGAATGAAACAAAGATCCTG +
Preference number: 2 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDWCRIK*NETKIL
Trigger: CAGGATCTTTGTTTCATTTCACTTAATTCTGCACCA...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR TCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATGAGTCTAACCCCTGTTaGGCTAAAATTTGTAATGTT +
Preference number: 2 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDESNPC*AKICNV
Trigger: AACATTACAAATTTTAGCTCAACAGGGGTTAGACTC...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCCCTCCAAAGATGGGTTaGCTACAGGATGTATTCTTT +
Preference number: 2 (lower is better)
Translates to: SSDPPTSISSVFGITCASPPKMG*LQDVFF
Trigger: AAAGAATACATCCTGTAGCCAACCCATCTTTGGAGG...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CAA 90 bp CACCATTTCATACCCAACCTCCTGTGTACTAACCTTCAACCTCCTTaGGTGGAGACCTTCCCCAATATCACCAACCAAATAAAAACAAAG +
Preference number: 2 (lower is better)
Translates to: HHFIPNLLCTNLQPP*VETFPNITNQIKTK
Trigger: CTTTGTTTTTATTTGGTTGGTGATATTGGGGAAGGTCTCCACCAAAGGAGGTTGAAGGTTAGTACACAGGAGGTTGGGTATGAAATGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR TCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCCTTGTTAGCCACATCTaGCCTAAAATAAAACTCAGG +
Preference number: 2 (lower is better)
Translates to: SSDPPTSISSVFGITCASLVSHI*PKIKLR
Trigger: CCTGAGTTTTATTTTAGGTCAGATGTGGCTAACAAG...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCTCCTACAAATCTCATTaGGAGCAAATCTTCAACCCT +
Preference number: 2 (lower is better)
Translates to: SSDPPTSISSVFGITCASSYKSH*EQIFNP
Trigger: AGGGTTGAAGATTTGCTCCCAATGAGATTTGTAGGA...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCCTTGGTTCTAAGCGGTaGTCTATGATGTTACATCAA +
Preference number: 2 (lower is better)
Translates to: SSDPPTSISSVFGITCASLGSKR*SMMLHQ
Trigger: TTGATGTAACATCATAGACCACCGCTTAGAACCAAG...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCTTTAACCGAGATGAATaGATGAGCAGAATAGTCAGC +
Preference number: 2 (lower is better)
Translates to: SSDPPTSISSVFGITCASFNRDE*MSRIVS
Trigger: GCTGACTATTCTGCTCATCCATTCATCTCGGTTAAA...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR TCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCCAGAAATCTAAGAGATaGGACTGTAAGGCATTTACA +
Preference number: 2 (lower is better)
Translates to: SSDPPTSISSVFGITCASQKSKR*DCKAFT
Trigger: TGTAAATGCCTTACAGTCTCATCTCTTAGATTTCTG...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR TCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCTGGTGCAGAATTAAGTaGAATGAAACAAAGATCCTG +
Preference number: 2 (lower is better)
Translates to: SSDPPTSISSVFGITCASWCRIK*NETKIL
Trigger: CAGGATCTTTGTTTCATTTCACTTAATTCTGCACCA...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR TCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCGTCTTTATCAAGACTTaGCATGTTCTTGGTTCTAAG +
Preference number: 2 (lower is better)
Translates to: SSDPPTSISSVFGITCASVFIKT*HVLGSK
Trigger: CTTAGAACCAAGAACATGTCAAGTCTTGATAAAGAC...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCGGAATAGCTTCTCTTTaGAATTTTGTTGAGGTTCCT +
Preference number: 2 (lower is better)
Translates to: SSDPPTSISSVFGITCASGIASL*NFVEVP
Trigger: AGGAACCTCAACAAAATTCCAAAGAGAAGCTATTCC...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CAA 90 bp ATTTGTAATGTTTTGGGCAGAAAGCTGCTAAGAAGCAGCTTGGGTTaGCAATCAGTACGATCCATAACACTCAGTTCTATTACTGGTTGC +
Preference number: 2 (lower is better)
Translates to: ICNVLGRKLLRSSLG*QSVRSITLSSITGC
Trigger: GCAACCAGTAATAGAACTGAGTGTTATGGATCGTACTGATTGCAAACCCAAGCTGCTTCTTAGCAGCTTTCTGCCCAAAACATTACAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR TCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCCTAAGCGGTGGTCTATaGTGTTACATCAAGCTGTCA +
Preference number: 2 (lower is better)
Translates to: PNDRKKTRIIGKMITENSLSGGL*CYIKLS
Trigger: TGACAGCTTGATGTAACATCATAGACCACCGCTTAG...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR TCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCCCTTATGAGGCCATGTaGTTTTGCAGACAGGCATTA +
Preference number: 2 (lower is better)
Translates to: PNDRKKTRIIGKMITENSPYEAM*FCRQAL
Trigger: TAATGCCTGTCTGCAAAATCACATGGCCTCATAAGG...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCTCTTATAGTAGCATATaGTATGGGATTACCAGCATA +
Preference number: 2 (lower is better)
Translates to: SSDPPTSISSVFGITCASSYSSI*YGITSI
Trigger: TATGCTGGTAATCCCATACCATATGCTACTATAAGA...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCAATGTCCTCACAGTATaGAGATATGAAAACAAAGAC +
Preference number: 2 (lower is better)
Translates to: SSDPPTSISSVFGITCASNVLTV*RYENKD
Trigger: GTCTTTGTTTTCATATCTCCATACTGTGAGGACATT...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR TCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCTGGGTCCAGGAAAAGTaGTTTATGTCACCTGGAATA +
Preference number: 2 (lower is better)
Translates to: PNDRKKTRIIGKMITENSWVQEK*FMSPGI
Trigger: TATTCCAGGTGACATAAATCACTTTTCCTGGACCCA...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR GCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCAAAGAGTTCCCCCTTTaGTTCTTTCTTTCATGGAAG +
Preference number: 2 (lower is better)
Translates to: PNDRKKTRIIGKMITENSKEFPL*FFLSWK
Trigger: CTTCCATGAAAGAAAGAAGCAAAGGGGGAACTCTTT...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCGGAGGGAGTTACTATTaGAAAATGATGATGCTGCTA +
Preference number: 2 (lower is better)
Translates to: PNDRKKTRIIGKMITENSGGSYY*KMMMLL
Trigger: TAGCAGCATCATCATTTTCCAATAGTAACTCCCTCC...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR TCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCGTCTTTATCAAGACTTaGCATGTTCTTGGTTCTAAG +
Preference number: 2 (lower is better)
Translates to: PNDRKKTRIIGKMITENSVFIKT*HVLGSK
Trigger: CTTAGAACCAAGAACATGTCAAGTCTTGATAAAGAC...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR GCA 72 bp AGCACCCAGAGTGGGTGTCTGGATTCCACATTTGGTTaGAGCGCAGGGCCTGGGTTCTCACAAGTCTTCAGC +
Preference number: 3 (lower is better)
Translates to: STQSGCLDSTFG*SAGPGFSQVFS
Trigger: GCTGAAGACTTGTGAGAACCCAGGCCCTGCGCTGCAACCAAATGTGGAATCCAGACACCCACTCTGGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CCA 72 bp TCCCAGCACCCAGAGTGGGTGTCTGGATTCCACATTTaGTTGCAGCGCAGGGCCTGGGTTCTCACAAGTCTT +
Preference number: 3 (lower is better)
Translates to: SQHPEWVSGFHI*LQRRAWVLTSL
Trigger: AAGACTTGTGAGAACCCAGGCCCTGCGCTGCAACCAAATGTGGAATCCAGACACCCACTCTGGGTGCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR TCA 72 bp CTGGCTGAAAGGCTGGTGAAGCCACTGAGGAGTGGATaGCAGACGTATTGCCTGCTACAACTGCAGCAGAGG +
Preference number: 3 (lower is better)
Translates to: LAERLVKPLRSG*QTYCLLQLQQR
Trigger: CCTCTGCTGCAGTTGTAGCAGGCAATACGTCTGTCATCCACTCCTCAGTGGCTTCACCAGCCTTTCAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CCA 72 bp AGTATATTGGGAATCCCAGCACCCAGAGTGGGTGTCTaGATTCCACATTTGGTTGCAGCGCAGGGCCTGGGT +
Preference number: 3 (lower is better)
Translates to: SILGIPAPRVGV*IPHLVAAQGLG
Trigger: ACCCAGGCCCTGCGCTGCAACCAAATGTGGAATCCAGACACCCACTCTGGGTGCTGGGATTCCCAATATACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CCA 72 bp TCCCTCTTCTCTCATCTAGAAGCTCAGGGGTTGTCTTaGCCCAGCTCTTTGGGCTTCCTATCCAGACCTGGA +
Preference number: 3 (lower is better)
Translates to: SLFSHLEAQGLS*PSSLGFLSRPG
Trigger: TCCAGGTCTGGATAGGAAGCCCAAAGAGCTGGGCCAAGACAACCCCTGAGCTTCTAGATGAGAGAAGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTTTCCTACAAATCTCATaGGGAGCAAATCTTCAACCC +
Preference number: 3 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLFLQIS*GANLQP
Trigger: GGGTTGAAGATTTGCTCCCAATGAGATTTGTAGGAA...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATGGAGTTCATGGCACTTaGCACCTCTGCTGCACCACA +
Preference number: 3 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDGVHGT*HLCCTT
Trigger: TGTGGTGCAGCAGAGGTGCAAAGTGCCATGAACTCC...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATAAGAAAACAGTGCATTaGGAGAGGGGGTGGGAGGAA +
Preference number: 3 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDKKTVH*ERGWEE
Trigger: TTCCTCCCACCCCCTCTCCAAATGCACTGTTTTCTT...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATTTCAAATTGCTCTCTTaGGGAGGGGCAGAGCAAGGT +
Preference number: 3 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDFKLLS*GGAEQG
Trigger: ACCTTGCTCTGCCCCTCCCAAAGAGAGCAATTTGAA...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATCCCATCATGTGGATGTaGAGTCTAACCCCTGTTGAG +
Preference number: 3 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDPIMWM*SLTPVE
Trigger: CTCAACAGGGGTTAGACTCAACATCCACATGATGGG...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR TCA 72 bp CTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATaGGGCCATGTGATTTTGCAGACAGGCATTAGGAGG +
Preference number: 3 (lower is better)
Translates to: LSFRLSLWGNAL*GHVILQTGIRR
Trigger: CCTCCTAATGCCTGTCTGCAAAATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATCTGCTAAGAAGCAGCTaGGGTTTGCAATCAGTACGA +
Preference number: 3 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDLLRSS*GLQSVR
Trigger: TCGTACTGATTGCAAACCCAAGCTGCTTCTTAGCAG...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR GCA 72 bp CAGTTCTTCTGGCCACCGTGTGAAGAAGGATGTGTTTaGTTCCACTTCCGCCATGATTGTAAGTTTCCTGAG +
Preference number: 3 (lower is better)
Translates to: QFFWPPCEEGCV*FHFRHDCKFPE
Trigger: CTCAGGAAACTTACAATCATGGCGGAAGTGGAAGCAAACACATCCTTCTTCACACGGTGGCCAGAAGAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CCA 72 bp CTCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTaGGATTACATGTGCAAGCCCCTGTGCCTGTGTTTA +
Preference number: 3 (lower is better)
Translates to: LKRSSHLNLFSF*DYMCKPLCLCL
Trigger: TAAACACAGGCACAGGGGCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATAGCTGTCAGTTTCCCTaGATGCTTTCTTCCTTTGCA +
Preference number: 3 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDSCQFP*MLSSFA
Trigger: TGCAAAGGAAGAAAGCATCAAGGGAAACTGACAGCT...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATTCCTCCAAAGATGGGTaGGCTACAGGATGTATTCTT +
Preference number: 3 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDSSKDG*ATGCIL
Trigger: AAGAATACATCCTGTAGCCAACCCATCTTTGGAGGA...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCAACCTTCAACCTCCTTaGGTGGAGACCTTCCCCAAT +
Preference number: 3 (lower is better)
Translates to: SSDPPTSISSVFGITCASNLQPP*VETFPN
Trigger: ATTGGGGAAGGTCTCCACCAAAGGAGGTTGAAGGTT...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCACTGTAAACTCCGTTTaGTTCCAGACTCTGCCCCAT +
Preference number: 3 (lower is better)
Translates to: SSDPPTSISSVFGITCASTVNSV*FQTLPH
Trigger: ATGGGGCAGAGTCTGGAACAAAACGGAGTTTACAGT...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR TCA 72 bp GATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTaGTTTTGCAGACAGGCATTAGGAGGGAGTTACTAT +
Preference number: 3 (lower is better)
Translates to: DCPFGAMPYEAM*FCRQALGGSYY
Trigger: ATAGTAACTCCCTCCTAATGCCTGTCTGCAAAATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCCACCGTAATGATAAATaGTCACCTACACCCGGCTTT +
Preference number: 3 (lower is better)
Translates to: SSDPPTSISSVFGITCASHRNDK*SPTPGF
Trigger: AAAGCCGGGTGTAGGTGACAATTTATCATTACGGTG...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCAGACTTGACATGTTCTaGGTTCTAAGCGGTGGTCTA +
Preference number: 3 (lower is better)
Translates to: SSDPPTSISSVFGITCASRLDMF*VLSGGL
Trigger: TAGACCACCGCTTAGAACCAAGAACATGTCAAGTCT...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCAGAAGCAGCTTGGGTTaGCAATCAGTACGATCCATA +
Preference number: 3 (lower is better)
Translates to: SSDPPTSISSVFGITCASRSSLG*QSVRSI
Trigger: TATGGATCGTACTGATTGCAAACCCAAGCTGCTTCT...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR GCA 72 bp GGCCAGCTTACAAACAGTCGGCTAACCCGTGGCTTCTaGATCACTCACACATCTGATTTTATGTTTTGTTTC +
Preference number: 3 (lower is better)
Translates to: GQLTNSRLTRGF*ITHTSDFMFCF
Trigger: GAAACAAAACATAAAATCAGATGTGTGAGTGATGCAGAAGCCACGGGTTAGCCGACTGTTTGTAAGCTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCGAAAGAGTTCCCCCTTaGCTTCTTTCTTTCATGGAA +
Preference number: 3 (lower is better)
Translates to: SSDPPTSISSVFGITCASERVPP*LLSFME
Trigger: TTCCATGAAAGAAAGAAGCAAAGGGGGAACTCTTTC...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR TCA 72 bp AAGGCCAGGGAGACCAATATAAGGAGTTGGCTACTATaGGTGCCAAAATTTCAGCCAACTAACAAGGTGTCA +
Preference number: 3 (lower is better)
Translates to: KARETNIRSWLL*VPKFQPTNKVS
Trigger: TGACACCTTGTTAGTTGGCTGAAATTTTGGCACTCATAGTAGCCAACTCCTTATATTGGTCTCCCTGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCCCCATCATGTGGATGTaGAGTCTAACCCCTGTTGAG +
Preference number: 3 (lower is better)
Translates to: PNDRKKTRIIGKMITENSPIMWM*SLTPVE
Trigger: CTCAACAGGGGTTAGACTCAACATCCACATGATGGG...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCGTTCAGATTGTCCCTTaGGGGCAATGCCTTATGAGG +
Preference number: 3 (lower is better)
Translates to: PNDRKKTRIIGKMITENSVQIVP*GQCLMR
Trigger: CCTCATAAGGCATTGCCCCAAAGGGACAATCTGAAC...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCAATAAACAACTATGTTaGCCTCCTGCAAGATTCTCG +
Preference number: 3 (lower is better)
Translates to: SSDPPTSISSVFGITCASNKQLC*PPARFS
Trigger: CGAGAATCTTGCAGGAGGCAAACATAGTTGTTTATT...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCATTGGAAAGACTCTATaGCAAATGCCTGTTCAACGT +
Preference number: 3 (lower is better)
Translates to: SSDPPTSISSVFGITCASIGKTL*QMPVQR
Trigger: ACGTTGAACAGGCATTTGCAATAGAGTCTTTCCAAT...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR TCA 72 bp AGACTTGACATGTTCTTGGTTCTAAGCGGTGGTCTATaGTGTTACATCAAGCTGTCAGTTTCCCTTGATGCT +
Preference number: 3 (lower is better)
Translates to: RLDMFLVLSGGL*CYIKLSVSLDA
Trigger: AGCATCAAGGGAAACTGACAGCTTGATGTAACATCATAGACCACCGCTTAGAACCAAGAACATGTCAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CCA 72 bp CACGGATCTGTACACAGGAGAGATGGGGACACTTCCTaGAAAAGCATTAATCACATCATAAAGGTAAAGAAC +
Preference number: 3 (lower is better)
Translates to: HGSVHRRDGDTS*KSINHIIKVKN
Trigger: GTTCTTTACCTTTATGATGTGATTAATGCTTTTCCAGGAAGTGTCCCCATCTCTCCTGTGTACAGATCCGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCCACCGTAATGATAAATaGTCACCTACACCCGGCTTT +
Preference number: 3 (lower is better)
Translates to: PNDRKKTRIIGKMITENSHRNDK*SPTPGF
Trigger: AAAGCCGGGTGTAGGTGACAATTTATCATTACGGTG...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCTGTCATTCTGACCACTaGGGTCCAGGAAAAGTGATT +
Preference number: 3 (lower is better)
Translates to: PNDRKKTRIIGKMITENSCHSDH*GPGKVI
Trigger: AATCACTTTTCCTGGACCCAAGTGGTCAGAATGACA...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCTTCCTACAAATCTCATaGGGAGCAAATCTTCAACCC +
Preference number: 3 (lower is better)
Translates to: PNDRKKTRIIGKMITENSFLQIS*GANLQP
Trigger: GGGTTGAAGATTTGCTCCCAATGAGATTTGTAGGAA...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR TCA 72 bp ATGATTGTAAGTTTCCTGAGGCCTCCTCAGCCATGCTaGACTGTGAGTCAACTAAACCCTGTTTTAAAAATA +
Preference number: 3 (lower is better)
Translates to: MIVSFLRPPQPC*TVSQLNPVLKI
Trigger: TATTTTTAAAACAGGGTTTAGTTGACTCACAGTTCAGCATGGCTGAGGAGGCCTCAGGAAACTTACAATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR-3UTR CAA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCCTTCTCTTTGGAATTTaGTTGAGGTTCCTGAAAGTC +
Preference number: 3 (lower is better)
Translates to: PNDRKKTRIIGKMITENSLLFGI*LRFLKV
Trigger: GACTTTCAGGAACCTCAACAAAATTCCAAAGAGAAG...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR TCA 72 bp ATTTTGTTGAGGTTCCTGAAAGTCTTTATCAAGACTTaGCATGTTCTTGGTTCTAAGCGGTGGTCTATGATG +
Preference number: 3 (lower is better)
Translates to: ILLRFLKVFIKT*HVLGSKRWSMM
Trigger: CATCATAGACCACCGCTTAGAACCAAGAACATGTCAAGTCTTGATAAAGACTTTCAGGAACCTCAACAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CCA 72 bp GAAAAGGTACAGGCAGCAGATAATGTAATAACATCATaGGTCATACAGTTGAATTCACACAATACTACAAGG +
Preference number: 3 (lower is better)
Translates to: EKVQAADNVITS*VIQLNSHNTTR
Trigger: CCTTGTAGTATTGTGTGAATTCAACTGTATGACCCATGATGTTATTACATTATCTGCTGCCTGTACCTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR TCA 72 bp AAGGAAGGTGCTAAGCCTCAGTTCCCCATTATTGCATaGAGAACTTTAATATATTTAGTTCCTAAGAGCAAA +
Preference number: 3 (lower is better)
Translates to: KEGAKPQFPIIA*RTLIYLVPKSK
Trigger: TTTGCTCTTAGGAACTAAATATATTAAAGTTCTTCATGCAATAATGGGGAACTGAGGCTTAGCACCTTCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR TCA 72 bp AATGATAAATTGTCACCTACACCCGGCTTTGCGATCTaGATTATGAAAAAGGTAACTATCCCTAATAACATT +
Preference number: 3 (lower is better)
Translates to: NDKLSPTPGFAI*IMKKVTIPNNI
Trigger: AATGTTATTAGGGATAGTTACCTTTTTCATAATTCAGATCGCAAAGCCGGGTGTAGGTGACAATTTATCATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTAGCCTCCCAGGTAGCTaGGACTACAAGCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLSLPGS*DYKHVP
Trigger: TGGCACGTGCTTGTAGTCCCAGCTACCTGGGAGGCT...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTCCCACCAGCAGCCCCTaGGAGAAGGAATTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLPTSSP*EKEFPD
Trigger: ATCTGGAAATTCCTTCTCTCAGGGGCTGCTGGTGGG...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTCTTGTCTTGAACTCCTaGTCTCGCGATCCACCCACC +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLLVLNS*SRDPPT
Trigger: GGTGGGTGGATCGCGAGATCAGGAGTTCAAGACAAG...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTGGCTCAGCGCCTGTCTaGATGTGCTTTGTGATCTGC +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLGSAPV*MCFVIC
Trigger: GCAGATCACAAAGCACATGCAGACAGGCGCTGAGCC...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTCCACTGAGGAGTGGATaGCAGACGTATTGCCTGCTA +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLPLRSG*QTYCLL
Trigger: TAGCAGGCAATACGTCTGTCATCCACTCCTCAGTGG...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTATGGTCATAGCTCACTaGAGCCTCAAACTACGGGGC +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLMVIAH*SLKLRG
Trigger: GCCCCGTAGTTTGAGGCTGCAGTGAGCTATGACCAT...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTCTTCTGGCCACCGTGTaGAGAAGGATGTGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLLLATV*RRMCLL
Trigger: AAGCAAACACATCCTTCTTCACACGGTGGCCAGAAG...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTGACAGACGTATTGCCTaGTACAACTGCAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLDRRIA*YNCSRG
Trigger: ACCTCTGCTGCAGTTGTAGCAGGCAATACGTCTGTC...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CAA 72 bp CAGCACCCAGAGTGGGTGTCTGGATTCCACATTTGGTaGCAGCGCAGGGCCTGGGTTCTCACAAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: QHPEWVSGFHIW*QRRAWVLTSLQ
Trigger: CTGAAGACTTGTGAGAACCCAGGCCCTGCGCTGCAACCAAATGTGGAATCCAGACACCCACTCTGGGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CAA 72 bp ATCCCAGCACCCAGAGTGGGTGTCTGGATTCCACATTaGGTTGCAGCGCAGGGCCTGGGTTCTCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: IPAPRVGVWIPH*VAAQGLGSHKS
Trigger: AGACTTGTGAGAACCCAGGCCCTGCGCTGCAACCAAATGTGGAATCCAGACACCCACTCTGGGTGCTGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTACTCTGCTGTGGCAATaGGCTATGTGTGTGGTATCA +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLTLLWQ*AMCVVS
Trigger: TGATACCACACACATAGCTCATTGCCACAGCAGAGT...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CAA 72 bp CTCCCTCTTCTCTCATCTAGAAGCTCAGGGGTTGTCTaGGCCCAGCTCTTTGGGCTTCCTATCCAGACCTGG +
Preference number: 4 (lower is better)
Translates to: LPLLSSRSSGVV*AQLFGLPIQTW
Trigger: CCAGGTCTGGATAGGAAGCCCAAAGAGCTGGGCCAAGACAACCCCTGAGCTTCTAGATGAGAGAAGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTCTAAGCGGTGGTCTATaGTGTTACATCAAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLLSGGL*CYIKLS
Trigger: TGACAGCTTGATGTAACATCATAGACCACCGCTTAG...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTTATAAGGCACCTAGCTaGAACCTTGTTAGCCACATC +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLYKAPS*NLVSHI
Trigger: GATGTGGCTAACAAGGTTTCAGCTAGGTGCCTTATA...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTTGGCATCTGTTTTGCTaGGGGGAAGTCCACTATTAT +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLWHLFC*GEVHYY
Trigger: ATAATAGTGGACTTCCCCTCAGCAAAACAGATGCCA...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTTTCCCAGTAGAGGGCTaGTTAACCAAGGTCAGTATT +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLFPVEG*LTKVSI
Trigger: AATACTGACCTTGGTTAAGCAGCCCTCTACTGGGAA...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTTTTTGTTCCAGACTCTaGCCCATCATGTGGATGTTG +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLFCSRL*PIMWML
Trigger: CAACATCCACATGATGGGGCAGAGTCTGGAACAAAA...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTGTTGATATTTTGGGCTaGTTCTCTTGGCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLVDILG*FSWQLL
Trigger: CAGAAGCTGCCAAGAGAAGCAGCCCAAAATATCAAC...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTTTCAACCTCCTTTGGTaGAGACCTTCCCCAATATCA +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLFNLLW*RPSPIS
Trigger: TGATATTGGGGAAGGTCTCCACCAAAGGAGGTTGAA...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CAA 72 bp TCTCCCTCCCTCTTCTCTCATCTAGAAGCTCAGGGGTaGTCTTGGCCCAGCTCTTTGGGCTTCCTATCCAGA +
Preference number: 4 (lower is better)
Translates to: SPSLFSHLEAQG*SWPSSLGFLSR
Trigger: TCTGGATAGGAAGCCCAAAGAGCTGGGCCAAGACAACCCCTGAGCTTCTAGATGAGAGAAGAGGGAGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTGTGTGGTATCAGGCCTaGTCTTGTCTCAGAAATATA +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLVWYQA*SCLRNI
Trigger: TATATTTCTGAGACAAGACCAGGCCTGATACCACAC...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTTTGGGCTGCTTCTCTTaGCAGCTTCTGAAAATAGAT +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLLGCFS*QLLKID
Trigger: ATCTATTTTCAGAAGCTGCCAAGAGAAGCAGCCCAA...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATCACATGCCCAAGAAGTaGCAGCCAGGACTGTGCACA +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDHMPKK*QPGLCT
Trigger: TGTGCACAGTCCTGGCTGTCACTTCTTGGGCATGTG...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTGATCATTATCTTAAGTaGAACAAGCCAGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLDHYLK*NKPGTE
Trigger: TTCTGTGCCTGGCTTGTTTCACTTAAGATAATGATC...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATCCTTGTGACAGTACCTaGGTTGGACTCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDPCDST*VGLCCG
Trigger: GCCACAGCAGAGTCCAACGCAGGTACTGTCACAAGG...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGGGCACTTTGCACCTCTaGTGCACCACACGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRGTLHL*CTTRLS
Trigger: GCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTACCTACACCCGGCTTTaGGATCTGAATTATGAAAAA +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLTYTRL*DLNYEK
Trigger: TTTTTCATAATTCAGATCGCAAAGCCGGGTGTAGGT...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTGTTGGCTACTATGAGTaGCAAAATTTCAGCCAACTA +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLVGYYE*QNFSQL
Trigger: TAGTTGGCTGAAATTTTGGCACTCATAGTAGCCAAC...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTTCCTACAAATCTCATTaGGAGCAAATCTTCAACCCT +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLSYKSH*EQIFNP
Trigger: AGGGTTGAAGATTTGCTCCCAATGAGATTTGTAGGA...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTGGAGGGAGTTACTATTaGAAAATGATGATGCTGCTA +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLGGSYY*KMMMLL
Trigger: TAGCAGCATCATCATTTTCCAATAGTAACTCCCTCC...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATTTGCAGCGCAGGGCCTaGGTTCTCACAAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDLQRRA*VLTSLQ
Trigger: CTGAAGACTTGTGAGAACCCAGGCCCTGCGCTGCAA...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTTTCCGTCTTAATCCCTaGCCATCTAAAATAGTTAGC +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLFRLNP*PSKIVS
Trigger: GCTAACTATTTTAGATGGCCAGGGATTAAGACGGAA...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTGTTCTCACTCATAAATaGGTGAAGATTATGGGAGTC +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLVLTHK*VKIMGV
Trigger: GACTCCCATAATCTTCACCCATTTATGAGTGAGAAC...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATGATCACAGGAGCTTTTaGAGGCCAGAGCTGAGGATC +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDDHRSF*RPELRI
Trigger: GATCCTCAGCTCTGGCCTTCAAAAGCTCCTGTGATC...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATCCAGAGAGGAGCATCTaGATCCTTAGGCTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDPERSI*ILRLSG
Trigger: TCCACTCAGCCTAAGGATTCAGATGCTCCTCTCTGG...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTTTATTTTCCAGTTGTTaGTATTTTGGGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLLFSSC*YFGLLL
Trigger: GAGAAGCAGCCCAAAATATCAACAACTGGAAAATAA...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATATGGTCATAGCTCACTaGAGCCTCAAACTACGGGGC +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDMVIAH*SLKLRG
Trigger: GCCCCGTAGTTTGAGGCTGCAGTGAGCTATGACCAT...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATTTTCCCTGCTTTGCTTaGCAGTTCTTCTGGCCACCG +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDFPCFA*QFFWPP
Trigger: CGGTGGCCAGAAGAACTGCCAAGCAAAGCAGGGAAA...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCAGCCTCCCAGGTAGCTaGGACTACAAGCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASSLPGS*DYKHVP
Trigger: TGGCACGTGCTTGTAGTCCCAGCTACCTGGGAGGCT...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTGGAATAGCTTCTCTTTaGAATTTTGTTGAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLGIASL*NFVEVP
Trigger: AGGAACCTCAACAAAATTCCAAAGAGAAGCTATTCC...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CAA 72 bp GTGACTCATGTGGCTGTAATCACTAGGACAACAGCCTaGTATCTGGCTGAAAGGCTGGTGAAGCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: VTHVAVITRTTA*YLAERLVKPLR
Trigger: CCTCAGTGGCTTCACCAGCCTTTCAGCCAGATACAAGGCTGTTGTCCTAGTGATTACAGCCACATGAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCTTTGAAGGCCAGAGCTaGGGATCTTGCTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASFEGQS*GSCSHQ
Trigger: CTGGTGGGAGCAAGATCCTCAGCTCTGGCCTTCAAA...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATCCTCCTCAGCCATGCTaGACTGTGAGTCAACTAAAC +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDPPQPC*TVSQLN
Trigger: GTTTAGTTGACTCACAGTTCAGCATGGCTGAGGAGG...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATCTTCTGGCCACCGTGTaGAGAAGGATGTGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDLLATV*RRMCLL
Trigger: AAGCAAACACATCCTTCTTCACACGGTGGCCAGAAG...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGCTTGTCTTGAACTCCTaGTCTCGCGATCCACCCACC +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRLVLNS*SRDPPT
Trigger: GGTGGGTGGATCGCGAGATCAGGAGTTCAAGACAAG...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGTGGCCAGGCTTGTCTTaGACTCCTGATCTCGCGATC +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRWPGLS*TPDLAI
Trigger: GATCGCGAGATCAGGAGTTCAAGACAAGCCTGGCCA...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCCACATGCCCAAGAAGTaGCAGCCAGGACTGTGCACA +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASHMPKK*QPGLCT
Trigger: TGTGCACAGTCCTGGCTGTCACTTCTTGGGCATGTG...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATTGGGGCAATGCCTTATaGGGCCATGTGATTTTGCAG +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDWGNAL*GHVILQ
Trigger: CTGCAAAATCACATGGCCTCATAAGGCATTGCCCCA...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTTATTTAGAGAAATTGTaGAGAGATCACAGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLYLEKL*RDHRSF
Trigger: AAAGCTCCTGTGATCTCTGCACAATTTCTCTAAATA...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATACCTGCGTTGGACTCTaGTGTGGCAATGAGCTATGT +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDTCVGL*CGNELC
Trigger: ACATAGCTCATTGCCACAGCAGAGTCCAACGCAGGT...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGCCTTGTGACAGTACCTaGGTTGGACTCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRPCDST*VGLCCG
Trigger: GCCACAGCAGAGTCCAACGCAGGTACTGTCACAAGG...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGGGCTCAGCGCCTGTCTaGATGTGCTTTGTGATCTGC +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRGSAPV*MCFVIC
Trigger: GCAGATCACAAAGCACATGCAGACAGGCGCTGAGCC...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGCTCAGCTTGCACCTGTaGTGGGTTCCCCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRLSLHL*WVPPFS
Trigger: TGAGAAAGGGGGAACCCAGCACAGGTGCAAGCTGAG...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTTCTTATAGTAGCATATaGTATGGGATTACCAGCATA +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLSYSSI*YGITSI
Trigger: TATGCTGGTAATCCCATACCATATGCTACTATAAGA...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGCATTTGGAGAGGGGGTaGGAGGAAAGAGTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRHLERG*EERVPP
Trigger: AGGGGGAACTCTTTCCTCCCACCCCCTCTCCAAATG...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCCAGTCGGCTAACCCGTaGCTTCTGCATCACTCACAC +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASQSANP*LLHHSH
Trigger: GTGTGAGTGATGCAGAAGCCACGGGTTAGCCGACTG...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCCTTGGCCCAGCTCTTTaGGCTTCCTATCCAGACCTG +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASLGPAL*ASYPDL
Trigger: CAGGTCTGGATAGGAAGCCCAAAGAGCTGGGCCAAG...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGCTTGGCCCAGCTCTTTaGGCTTCCTATCCAGACCTG +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRLGPAL*ASYPDL
Trigger: CAGGTCTGGATAGGAAGCCCAAAGAGCTGGGCCAAG...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTGTCTCTGTTGCATTTTaGGAAAATTATGCATTCCAT +
Preference number: 4 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLVSVAF*ENYAFH
Trigger: ATGGAATGCATAATTTTCCCAAAATGCAACAGAGAC...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCCAACTGCAGCAGAGGTaGGGGGCTCAAAGATGGCAA +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASQLQQR*GAQRWQ
Trigger: TTGCCATCTTTGAGCCCCCCACCTCTGCTGCAGTTG...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATGAAGCCACTGAGGAGTaGATGACAGACGTATTGCCT +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDEATEE*MTDVLP
Trigger: AGGCAATACGTCTGTCATCCACTCCTCAGTGGCTTC...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CAA 72 bp GAGAACAGCAGGGTGTCTCTCGTTCAGATTGTCCCTTaGGGGCAATGCCTTATGAGGCCATGTGATTTTGCA +
Preference number: 4 (lower is better)
Translates to: ENSRVSLVQIVP*GQCLMRPCDFA
Trigger: TGCAAAATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACACCCTGCTGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CAA 72 bp CATCTAGAAGCTCAGGGGTTGTCTTGGCCCAGCTCTTaGGGCTTCCTATCCAGACCTGGATCTTACGTAAAT +
Preference number: 4 (lower is better)
Translates to: HLEAQGLSWPSS*GFLSRPGSYVN
Trigger: ATTTACGTAAGATCCAGGTCTGGATAGGAAGCCCAAAGAGCTGGGCCAAGACAACCCCTGAGCTTCTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCGATCACAGGAGCTTTTaGAGGCCAGAGCTGAGGATC +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASDHRSF*RPELRI
Trigger: GATCCTCAGCTCTGGCCTTCAAAAGCTCCTGTGATC...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGTTCAAGCGATTCTTCTaGCTCAGCCTCCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRFKRFF*LSLPGS
Trigger: GCTACCTGGGAGGCTGAGGCAGAAGAATCGCTTGAA...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGGAGTTCATGGCACTTTaGACCTCTGCTGCACCACAC +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGREFMAL*TSAAPH
Trigger: GTGTGGTGCAGCAGAGGTGCAAAGTGCCATGAACTC...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCTTTGTCATGCCCTTGTaGCAGTACCTGCGTTGGACT +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASFVMPL*QYLRWT
Trigger: AGTCCAACGCAGGTACTGTCACAAGGGCATGACAAA...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATTGGCATCTGTTTTGCTaGGGGGAAGTCCACTATTAT +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDWHLFC*GEVHYY
Trigger: ATAATAGTGGACTTCCCCTCAGCAAAACAGATGCCA...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGAGGTGTGAGTCACCATaGCAGGCTGATCTGATGGTT +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRRCESP*QADLMV
Trigger: AACCATCAGATCAGCCTGGCATGGTGACTCACACCT...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCACTTTGCACCTCTGCTaGACCACACGGCTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSTLHLC*TTRLSA
Trigger: GGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGT...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGGTCCCTTTGGGGCAATaGCTTATGAGGCCATGTGAT +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRVPLGQ*LMRPCD
Trigger: ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGAC...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATAATGAGCTATGTGTGTaGTATCAGGCCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDNELCV*YQAWSC
Trigger: ACAAGACCAGGCCTGATACCACACACATAGCTCATT...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGCTCTGCCCCATCATGTaGATGTTGAGTCTAACCCCT +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRLCPIM*MLSLTP
Trigger: AGGGGTTAGACTCAACATCCACATGATGGGGCAGAG...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGCCCAGAGTGGGTGTCTaGATTCCACATTTGGTTGCA +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRPRVGV*IPHLVA
Trigger: TGCAACCAAATGTGGAATCCAGACACCCACTCTGGG...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATCAGTTGTTGATATTTTaGGCTGCTTCTCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDQLLIF*AASLGS
Trigger: GCTGCCAAGAGAAGCAGCCCAAAATATCAACAACTG...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCGAAGCCACTGAGGAGTaGATGACAGACGTATTGCCT +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASEATEE*MTDVLP
Trigger: AGGCAATACGTCTGTCATCCACTCCTCAGTGGCTTC...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGACTCTGCTGTGGCAATaGGCTATGTGTGTGGTATCA +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRTLLWQ*AMCVVS
Trigger: TGATACCACACACATAGCTCATTGCCACAGCAGAGT...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATACATCATTACCAAGATaGGACACTCAGTGTGAGCAA +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDTSLPR*DTQCEQ
Trigger: TTGCTCACACTGAGTGTCTCATCTTGGTAATGATGT...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCGCTGTCAGTTTCCCTTaGTGCTTTCTTCCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASAVSFP*CFLPLQ
Trigger: CTGCAAAGGAAGAAAGCATCAAGGGAAACTGACAGC...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATTCTACATACAGAGACTaGGATTTCCTAGAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDSTYRD*DFLEEL
Trigger: TAGCTCCTCTAGGAAATCTCAGTCTCTGTATGTAGA...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATTTAAAAGGCTTTCCCTaGTTTGCTTGGCAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDLKGFP*FAWQFF
Trigger: GAAGAACTGCCAAGCAAAGCAGGGAAAGCCTTTTAA...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCAGAAAACAGTGCATTTaGAGAGGGGGTGGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASRKQCI*RGGGRK
Trigger: TTTCCTCCCACCCCCTCTCCAAATGCACTGTTTTCT...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGTGTACACAGGAGAGATaGGGACACTTCCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRCTQER*GHFLEK
Trigger: CTTTTCCAGGAAGTGTCCCCATCTCTCCTGTGTACA...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATCATTTCCTCTCCTTGTaGTTTAATCTGTCACTGCTC +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDHFLSL*FNLSLL
Trigger: GAGCAGTGACAGATTAAACCACAAGGAGAGGAAATG...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCTTTGAAGGCCAGAGCTaGGGATCTTGCTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSFEGQS*GSCSHQ
Trigger: CTGGTGGGAGCAAGATCCTCAGCTCTGGCCTTCAAA...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCTGGCCAGGCTTGTCTTaGACTCCTGATCTCGCGATC +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSWPGLS*TPDLAI
Trigger: GATCGCGAGATCAGGAGTTCAAGACAAGCCTGGCCA...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATATGAGACACTCAGTGTaGGCAAAAGCCATGTATAAA +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDMRHSV*AKAMYK
Trigger: TTTATACATGGCTTTTGCTCACACTGAGTGTCTCAT...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGCCTTATGAGGCCATGTaGTTTTGCAGACAGGCATTA +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRPYEAM*FCRQAL
Trigger: TAATGCCTGTCTGCAAAATCACATGGCCTCATAAGG...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATCTTGTTAGCCACATCTaGCCTAAAATAAAACTCAGG +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDLVSHI*PKIKLR
Trigger: CCTGAGTTTTATTTTAGGTCAGATGTGGCTAACAAG...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGTATAAGGCACCTAGCTaGAACCTTGTTAGCCACATC +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRYKAPS*NLVSHI
Trigger: GATGTGGCTAACAAGGTTTCAGCTAGGTGCCTTATA...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCAAGGTGTCACCAGGGTaGGTTTCTATCTCTACATAC +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASKVSPG*VSISTY
Trigger: GTATGTAGAGATAGAAACTCACCCTGGTGACACCTT...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGAAGGTGTCACCAGGGTaGGTTTCTATCTCTACATAC +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRKVSPG*VSISTY
Trigger: GTATGTAGAGATAGAAACTCACCCTGGTGACACCTT...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGAGGAGTTGGCTACTATaGGTGCCAAAATTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRRSWLL*VPKFQP
Trigger: TGGCTGAAATTTTGGCACTCATAGTAGCCAACTCCT...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCGGCAGGAGAATGGCATaGAACCAGGAGGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSGRRMA*NQEAEL
Trigger: AAGCTCTGCCTCCTGGTTTCATGCCATTCTCCTGCC...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCTTTTGTTCCAGACTCTaGCCCATCATGTGGATGTTG +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASFCSRL*PIMWML
Trigger: CAACATCCACATGATGGGGCAGAGTCTGGAACAAAA...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGACTATGTTTGCCTCCTaGAAGATTCTCGATGGGACA +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRTMFAS*KILDGT
Trigger: TGTCCCATCGAGAATCTTGCAGGAGGCAAACATAGT...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCCCAGGAGGCAGAGCTTaGAGTGAACCGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSPGGRA*SEPRLC
Trigger: GCACAATCTCGGTTCACTGCAAGCTCTGCCTCCTGG...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCAATGAGCTATGTGTGTaGTATCAGGCCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASNELCV*YQAWSC
Trigger: ACAAGACCAGGCCTGATACCACACACATAGCTCATT...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATTTTAACCGAGATGAATaGATGAGCAGAATAGTCAGC +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDFNRDE*MSRIVS
Trigger: GCTGACTATTCTGCTCATCCATTCATCTCGGTTAAA...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATGGAGGGAGTTACTATTaGAAAATGATGATGCTGCTA +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDGGSYY*KMMMLL
Trigger: TAGCAGCATCATCATTTTCCAATAGTAACTCCCTCC...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCTTCAACCTCCTTTGGTaGAGACCTTCCCCAATATCA +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASFNLLW*RPSPIS
Trigger: TGATATTGGGGAAGGTCTCCACCAAAGGAGGTTGAA...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCCAGTTGTTGATATTTTaGGCTGCTTCTCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASQLLIF*AASLGS
Trigger: GCTGCCAAGAGAAGCAGCCCAAAATATCAACAACTG...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CAA 72 bp ATACCCAACCTCCTGTGTACTAACCTTCAACCTCCTTaGGTGGAGACCTTCCCCAATATCACCAACCAAATA +
Preference number: 4 (lower is better)
Translates to: IPNLLCTNLQPP*VETFPNITNQI
Trigger: TATTTGGTTGGTGATATTGGGGAAGGTCTCCACCAAAGGAGGTTGAAGGTTAGTACACAGGAGGTTGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCACATCATTACCAAGATaGGACACTCAGTGTGAGCAA +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASTSLPR*DTQCEQ
Trigger: TTGCTCACACTGAGTGTCTCATCTTGGTAATGATGT...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGCCCGGCTTTGCGATCTaGATTATGAAAAAGGTAACT +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRPGFAI*IMKKVT
Trigger: AGTTACCTTTTTCATAATTCAGATCGCAAAGCCGGG...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCTGGGTCCAGGAAAAGTaGTTTATGTCACCTGGAATA +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASWVQEK*FMSPGI
Trigger: TATTCCAGGTGACATAAATCACTTTTCCTGGACCCA...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATAGAACTGACATAGGATaGATTATACCCCCTGATTTT +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDRTDIG*IIPPDF
Trigger: AAAATCAGGGGGTATAATTCATCCTATGTCAGTTCT...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCTCTACATACAGAGACTaGGATTTCCTAGAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASSTYRD*DFLEEL
Trigger: TAGCTCCTCTAGGAAATCTCAGTCTCTGTATGTAGA...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCCCACTGAGGAGTGGATaGCAGACGTATTGCCTGCTA +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSPLRSG*QTYCLL
Trigger: TAGCAGGCAATACGTCTGTCATCCACTCCTCAGTGG...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCAGCCTTGTATCTGGCTaGAAGGCTGGTGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSSLVSG*KAGEAT
Trigger: AGTGGCTTCACCAGCCTTTCAGCCAGATACAAGGCT...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCTTTCCCTGCTTTGCTTaGCAGTTCTTCTGGCCACCG +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSFPCFA*QFFWPP
Trigger: CGGTGGCCAGAAGAACTGCCAAGCAAAGCAGGGAAA...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGCCTCCAAAGATGGGTTaGCTACAGGATGTATTCTTT +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRPPKMG*LQDVFF
Trigger: AAAGAATACATCCTGTAGCCAACCCATCTTTGGAGG...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCCATTTCCTCTCCTTGTaGTTTAATCTGTCACTGCTC +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASHFLSL*FNLSLL
Trigger: GAGCAGTGACAGATTAAACCACAAGGAGAGGAAATG...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGTTGGGCTGCTTCTCTTaGCAGCTTCTGAAAATAGAT +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRLGCFS*QLLKID
Trigger: ATCTATTTTCAGAAGCTGCCAAGAGAAGCAGCCCAA...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCCCTCCTCAGCCATGCTaGACTGTGAGTCAACTAAAC +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSPPQPC*TVSQLN
Trigger: GTTTAGTTGACTCACAGTTCAGCATGGCTGAGGAGG...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCTTTGTCATGCCCTTGTaGCAGTACCTGCGTTGGACT +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSFVMPL*QYLRWT
Trigger: AGTCCAACGCAGGTACTGTCACAAGGGCATGACAAA...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGATGAGACACTCAGTGTaGGCAAAAGCCATGTATAAA +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRMRHSV*AKAMYK
Trigger: TTTATACATGGCTTTTGCTCACACTGAGTGTCTCAT...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCTGGGGCAATGCCTTATaGGGCCATGTGATTTTGCAG +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSWGNAL*GHVILQ
Trigger: CTGCAAAATCACATGGCCTCATAAGGCATTGCCCCA...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCAAAGAGTTCCCCCTTTaGTTCTTTCTTTCATGGAAG +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASKEFPL*FFLSWK
Trigger: CTTCCATGAAAGAAAGAAGCAAAGGGGGAACTCTTT...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCGTCCCTTTGGGGCAATaGCTTATGAGGCCATGTGAT +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSVPLGQ*LMRPCD
Trigger: ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGAC...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCGACAGACGTATTGCCTaGTACAACTGCAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSDRRIA*YNCSRG
Trigger: ACCTCTGCTGCAGTTGTAGCAGGCAATACGTCTGTC...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGCTTGGTTCTAAGCGGTaGTCTATGATGTTACATCAA +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRLGSKR*SMMLHQ
Trigger: TTGATGTAACATCATAGACCACCGCTTAGAACCAAG...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGTTTAACCGAGATGAATaGATGAGCAGAATAGTCAGC +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRFNRDE*MSRIVS
Trigger: GCTGACTATTCTGCTCATCCATTCATCTCGGTTAAA...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATAATGTCCTCACAGTATaGAGATATGAAAACAAAGAC +
Preference number: 4 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDNVLTV*RYENKD
Trigger: GTCTTTGTTTTCATATCTCCATACTGTGAGGACATT...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCCCCAGAGTGGGTGTCTaGATTCCACATTTGGTTGCA +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSPRVGV*IPHLVA
Trigger: TGCAACCAAATGTGGAATCCAGACACCCACTCTGGG...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CAA 72 bp GTTTTGGGCAGAAAGCTGCTAAGAAGCAGCTTGGGTTaGCAATCAGTACGATCCATAACACTCAGTTCTATT +
Preference number: 4 (lower is better)
Translates to: VLGRKLLRSSLG*QSVRSITLSSI
Trigger: AATAGAACTGAGTGTTATGGATCGTACTGATTGCAAACCCAAGCTGCTTCTTAGCAGCTTTCTGCCCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CAA 72 bp TTTCCCCACTTTGTGGAAGGCAATAAACAACTATGTTaGCCTCCTGCAAGATTCTCGATGGGACATATGAAG +
Preference number: 4 (lower is better)
Translates to: FPHFVEGNKQLC*PPARFSMGHMK
Trigger: CTTCATATGTCCCATCGAGAATCTTGCAGGAGGCAAACATAGTTGTTTATTGCCTTCCACAAAGTGGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGTGGTGCAGAATTAAGTaGAATGAAACAAAGATCCTG +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRWCRIK*NETKIL
Trigger: CAGGATCTTTGTTTCATTTCACTTAATTCTGCACCA...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGGAGTCTAACCCCTGTTaGGCTAAAATTTGTAATGTT +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRESNPC*AKICNV
Trigger: AACATTACAAATTTTAGCTCAACAGGGGTTAGACTC...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCGAGTCTAACCCCTGTTaGGCTAAAATTTGTAATGTT +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASESNPC*AKICNV
Trigger: AACATTACAAATTTTAGCTCAACAGGGGTTAGACTC...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGTTATTTTCCAGTTGTTaGTATTTTGGGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRLFSSC*YFGLLL
Trigger: GAGAAGCAGCCCAAAATATCAACAACTGGAAAATAA...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGATGTATAAAAAGGTCTaGATTGTGCATGGGACAAAG +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRMYKKV*IVHGTK
Trigger: CTTTGTCCCATGCACAATGCAGACCTTTTTATACAT...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCATAAACAACTATGTTTaGCTCCTGCAAGATTCTCGA +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASINNYV*LLQDSR
Trigger: TCGAGAATCTTGCAGGAGGCAAACATAGTTGTTTAT...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGGGAATAGCTTCTCTTTaGAATTTTGTTGAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRGIASL*NFVEVP
Trigger: AGGAACCTCAACAAAATTCCAAAGAGAAGCTATTCC...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCAGAAAACAGTGCATTTaGAGAGGGGGTGGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSRKQCI*RGGGRK
Trigger: TTTCCTCCCACCCCCTCTCCAAATGCACTGTTTTCT...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCTGTACACAGGAGAGATaGGGACACTTCCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSCTQER*GHFLEK
Trigger: CTTTTCCAGGAAGTGTCCCCATCTCTCCTGTGTACA...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCACCTTCAACCTCCTTTaGTGGAGACCTTCCCCAATA +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSTFNLL*WRPSPI
Trigger: TATTGGGGAAGGTCTCCACCAAAGGAGGTTGAAGGT...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCAGGAGTTGGCTACTATaGGTGCCAAAATTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSRSWLL*VPKFQP
Trigger: TGGCTGAAATTTTGGCACTCATAGTAGCCAACTCCT...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCTATTTAGAGAAATTGTaGAGAGATCACAGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: SSDPPTSISSVFGITCASYLEKL*RDHRSF
Trigger: AAAGCTCCTGTGATCTCTGCACAATTTCTCTAAATA...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCTTCCCAGTAGAGGGCTaGTTAACCAAGGTCAGTATT +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSFPVEG*LTKVSI
Trigger: AATACTGACCTTGGTTAAGCAGCCCTCTACTGGGAA...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCACTATGTTTGCCTCCTaGAAGATTCTCGATGGGACA +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSTMFAS*KILDGT
Trigger: TGTCCCATCGAGAATCTTGCAGGAGGCAAACATAGT...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCGTTGATATTTTGGGCTaGTTCTCTTGGCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSVDILG*FSWQLL
Trigger: CAGAAGCTGCCAAGAGAAGCAGCCCAAAATATCAAC...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGTCTTATAGTAGCATATaGTATGGGATTACCAGCATA +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRSYSSI*YGITSI
Trigger: TATGCTGGTAATCCCATACCATATGCTACTATAAGA...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGAATGTCCTCACAGTATaGAGATATGAAAACAAAGAC +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRNVLTV*RYENKD
Trigger: GTCTTTGTTTTCATATCTCCATACTGTGAGGACATT...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGATGTTTATCTTGCCTTaGGGGCTAATTTTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRMFILP*GLILSF
Trigger: AAAAGACAAAATTAGCCCCCAAGGCAAGATAAACAT...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGGTCTCTGTTGCATTTTaGGAAAATTATGCATTCCAT +
Preference number: 4 (lower is better)
Translates to: RKLERTKPQKNRKQILGRVSVAF*ENYAFH
Trigger: ATGGAATGCATAATTTTCCCAAAATGCAACAGAGAC...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCCTTGTTAGCCACATCTaGCCTAAAATAAAACTCAGG +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSLVSHI*PKIKLR
Trigger: CCTGAGTTTTATTTTAGGTCAGATGTGGCTAACAAG...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCGATCATTATCTTAAGTaGAACAAGCCAGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSDHYLK*NKPGTE
Trigger: TTCTGTGCCTGGCTTGTTTCACTTAAGATAATGATC...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCGTTCTCACTCATAAATaGGTGAAGATTATGGGAGTC +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSVLTHK*VKIMGV
Trigger: GACTCCCATAATCTTCACCCATTTATGAGTGAGAAC...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
3UTR CAA 72 bp ATAAAACAAATTACCTGTCCATGTCATTCTGACCACTaGGGTCCAGGAAAAGTGATTTATGTCACCTGGAAT +
Preference number: 4 (lower is better)
Translates to: IKQITCPCHSDH*GPGKVIYVTWN
Trigger: ATTCCAGGTGACATAAATCACTTTTCCTGGACCCAAGTGGTCAGAATGACATGGACAGGTAATTTGTTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR TCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCTGGTGCAGAATTAAGTaGAATGAAACAAAGATCCTG +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSWCRIK*NETKIL
Trigger: CAGGATCTTTGTTTCATTTCACTTAATTCTGCACCA...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCATGTATAAAAAGGTCTaGATTGTGCATGGGACAAAG +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSMYKKV*IVHGTK
Trigger: CTTTGTCCCATGCACAATGCAGACCTTTTTATACAT...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR GCA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCATAAACAACTATGTTTaGCTCCTGCAAGATTCTCGA +
Preference number: 4 (lower is better)
Translates to: PNDRKKTRIIGKMITENSINNYV*LLQDSR
Trigger: TCGAGAATCTTGCAGGAGGCAAACATAGTTGTTTAT...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTTCTTGGCCCAGCTCTTaGGGCTTCCTATCCAGACCT +
Preference number: 5 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLSWPSS*GFLSRP
Trigger: AGGTCTGGATAGGAAGCCCAAAGAGCTGGGCCAAGA...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTAAGAAAACAGTGCATTaGGAGAGGGGGTGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLKKTVH*ERGWEE
Trigger: TTCCTCCCACCCCCTCTCCAAATGCACTGTTTTCTT...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTTTCAAATTGCTCTCTTaGGGAGGGGCAGAGCAAGGT +
Preference number: 5 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLFKLLS*GGAEQG
Trigger: ACCTTGCTCTGCCCCTCCCAAAGAGAGCAATTTGAA...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTTGGATGACAGACGTATaGCCTGCTACAACTGCAGCA +
Preference number: 5 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLWMTDV*PATTAA
Trigger: TGCTGCAGTTGTAGCAGGCAATACGTCTGTCATCCA...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTACTGTAAACTCCGTTTaGTTCCAGACTCTGCCCCAT +
Preference number: 5 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLTVNSV*FQTLPH
Trigger: ATGGGGCAGAGTCTGGAACAAAACGGAGTTTACAGT...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTCAATCTCTTCAGTTTTaGGGATTACATGTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLQSLQF*GLHVQA
Trigger: GGCTTGCACATGTAATCCCAAAAACTGAAGAGATTG...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTCCTTGGGGGCTAATTTaGTCTTTTTCATTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLPWGLI*SFSFPL
Trigger: GAGAGGAAATGAAAAAGACAAAATTAGCCCCCAAGG...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATGTCTGGATTCCACATTaGGTTGCAGCGCAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDVWIPH*VAAQGL
Trigger: CAGGCCCTGCGCTGCAACCAAATGTGGAATCCAGAC...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATCTTTCCCTGCTTTGCTaGGCAGTTCTTCTGGCCACC +
Preference number: 5 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDLSLLC*AVLLAT
Trigger: GGTGGCCAGAAGAACTGCCAAGCAAAGCAGGGAAAG...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTCTTCTCTTTGGAATTTaGTTGAGGTTCCTGAAAGTC +
Preference number: 5 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLLLFGI*LRFLKV
Trigger: GACTTTCAGGAACCTCAACAAAATTCCAAAGAGAAG...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTAATAAACAACTATGTTaGCCTCCTGCAAGATTCTCG +
Preference number: 5 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLNKQLC*PPARFS
Trigger: CGAGAATCTTGCAGGAGGCAAACATAGTTGTTTATT...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTGTATTTTTCCCCACTTaGTGGAAGGCAATAAACAAC +
Preference number: 5 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLVFFPT*WKAINN
Trigger: GTTGTTTATTGCCTTCCACAAAGTGGGGAAAAATAC...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GGCACTTTGCACCTCTGCTGCACCACACGGCTCAGCGCCTGTCTGCATGTGCTTATTGGAAAGACTCTATaGCAAATGCCTGTTCAACGT +
Preference number: 5 (lower is better)
Translates to: GTLHLCCTTRLSACLHVLIGKTL*QMPVQR
Trigger: ACGTTGAACAGGCATTTGCAATAGAGTCTTTCCAAT...AAGCACATGCAGACAGGCGCTGAGCCGTGTGGTGCAGCAGAGGTGCAAAGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATCTAGAAGCTCAGGGGTaGTCTTGGCCCAGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDLEAQG*SWPSSL
Trigger: CAAAGAGCTGGGCCAAGACAACCCCTGAGCTTCTAG...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS TCA 90 bp ACTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCTCAGCCATGCTaGACTGTGAGTCAACTAAACCTGTGGTATCAGGCCTGGTCTTGT +
Preference number: 5 (lower is better)
Translates to: TSAMIVSFLRPPQPC*TVSQLNLWYQAWSC
Trigger: ACAAGACCAGGCCTGATACCACAGGTTTAGTTGACTCACAGTTCAGCATGGCTGAGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641779.1
ENST00000642152.1
CDS-3UTR CAA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCGTGACAGTACCTGCGTaGGACTCTGCTGTGGCAATG +
Preference number: 5 (lower is better)
Translates to: SSDPPTSISSVFGITCASVTVPA*DSAVAM
Trigger: CATTGCCACAGCAGAGTCCAACGCAGGTACTGTCAC...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGGTGACAGTACCTGCGTaGGACTCTGCTGTGGCAATG +
Preference number: 5 (lower is better)
Translates to: RKLERTKPQKNRKQILGRVTVPA*DSAVAM
Trigger: CATTGCCACAGCAGAGTCCAACGCAGGTACTGTCAC...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGGGAGTTCATGGCACTTaGCACCTCTGCTGCACCACA +
Preference number: 5 (lower is better)
Translates to: RKLERTKPQKNRKQILGRGVHGT*HLCCTT
Trigger: TGTGGTGCAGCAGAGGTGCAAAGTGCCATGAACTCC...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATGTTCAGATTGTCCCTTaGGGGCAATGCCTTATGAGG +
Preference number: 5 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDVQIVP*GQCLMR
Trigger: CCTCATAAGGCATTGCCCCAAAGGGACAATCTGAAC...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCTCTTGGCCCAGCTCTTaGGGCTTCCTATCCAGACCT +
Preference number: 5 (lower is better)
Translates to: SSDPPTSISSVFGITCASSWPSS*GFLSRP
Trigger: AGGTCTGGATAGGAAGCCCAAAGAGCTGGGCCAAGA...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCCTAGAAGCTCAGGGGTaGTCTTGGCCCAGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: SSDPPTSISSVFGITCASLEAQG*SWPSSL
Trigger: CAAAGAGCTGGGCCAAGACAACCCCTGAGCTTCTAG...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATTGTTCAAGCCAAGGTTaGTCAGCATCTTGGGGACAT +
Preference number: 5 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDCSSQG*SASWGH
Trigger: ATGTCCCCAAGATGCTGACAAACCTTGGCTTGAACA...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATCCAGTTGTTGATATTTaGGGCTGCTTCTCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDPVVDI*GCFSWQ
Trigger: CTGCCAAGAGAAGCAGCCCAAAATATCAACAACTGG...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATCTTTTGGCATCTGTTTaGCTGAGGGGAAGTCCACTA +
Preference number: 5 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDLLASV*LRGSPL
Trigger: TAGTGGACTTCCCCTCAGCAAAACAGATGCCAAAAG...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGAGATCACAGGAGCTTTaGAAGGCCAGAGCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: RKLERTKPQKNRKQILGRRSQEL*KARAED
Trigger: ATCCTCAGCTCTGGCCTTCAAAAGCTCCTGTGATCT...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATCACCGTAATGATAAATaGTCACCTACACCCGGCTTT +
Preference number: 5 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDHRNDK*SPTPGF
Trigger: AAAGCCGGGTGTAGGTGACAATTTATCATTACGGTG...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATAGACTTGACATGTTCTaGGTTCTAAGCGGTGGTCTA +
Preference number: 5 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDRLDMF*VLSGGL
Trigger: TAGACCACCGCTTAGAACCAAGAACATGTCAAGTCT...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGTTCAAATTGCTCTCTTaGGGAGGGGCAGAGCAAGGT +
Preference number: 5 (lower is better)
Translates to: RKLERTKPQKNRKQILGRFKLLS*GGAEQG
Trigger: ACCTTGCTCTGCCCCTCCCAAAGAGAGCAATTTGAA...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCCCCATCATGTGGATGTaGAGTCTAACCCCTGTTGAG +
Preference number: 5 (lower is better)
Translates to: SSDPPTSISSVFGITCASPIMWM*SLTPVE
Trigger: CTCAACAGGGGTTAGACTCAACATCCACATGATGGG...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGAACCTTCAACCTCCTTaGGTGGAGACCTTCCCCAAT +
Preference number: 5 (lower is better)
Translates to: RKLERTKPQKNRKQILGRNLQPP*VETFPN
Trigger: ATTGGGGAAGGTCTCCACCAAAGGAGGTTGAAGGTT...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGGTGAGACTGAGTATATaGGGAATCCCAGCACCCAGA +
Preference number: 5 (lower is better)
Translates to: RKLERTKPQKNRKQILGRVRLSI*GIPAPR
Trigger: TCTGGGTGCTGGGATTCCCAATATACTCAGTCTCAC...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCGTGAGACTGAGTATATaGGGAATCCCAGCACCCAGA +
Preference number: 5 (lower is better)
Translates to: SSDPPTSISSVFGITCASVRLSI*GIPAPR
Trigger: TCTGGGTGCTGGGATTCCCAATATACTCAGTCTCAC...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCACTAGGACAACAGCCTaGTATCTGGCTGAAAGGCTG +
Preference number: 5 (lower is better)
Translates to: SSDPPTSISSVFGITCASTRTTA*YLAERL
Trigger: CAGCCTTTCAGCCAGATACAAGGCTGTTGTCCTAGT...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCTGTTCAAGCCAAGGTTaGTCAGCATCTTGGGGACAT +
Preference number: 5 (lower is better)
Translates to: SSDPPTSISSVFGITCASCSSQG*SASWGH
Trigger: ATGTCCCCAAGATGCTGACAAACCTTGGCTTGAACA...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGCTGGCATCCCTCACTTaGATCTCTGTTTCCACAACA +
Preference number: 5 (lower is better)
Translates to: RKLERTKPQKNRKQILGRLASLT*ISVSTT
Trigger: TGTTGTGGAAACAGAGATCAAAGTGAGGGATGCCAG...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCCTGCTAAGAAGCAGCTaGGGTTTGCAATCAGTACGA +
Preference number: 5 (lower is better)
Translates to: SSDPPTSISSVFGITCASLLRSS*GLQSVR
Trigger: TCGTACTGATTGCAAACCCAAGCTGCTTCTTAGCAG...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGACTGTAAACTCCGTTTaGTTCCAGACTCTGCCCCAT +
Preference number: 5 (lower is better)
Translates to: RKLERTKPQKNRKQILGRTVNSV*FQTLPH
Trigger: ATGGGGCAGAGTCTGGAACAAAACGGAGTTTACAGT...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATCAATCTCTTCAGTTTTaGGGATTACATGTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDQSLQF*GLHVQA
Trigger: GGCTTGCACATGTAATCCCAAAAACTGAAGAGATTG...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS CCA 90 bp GATGAGACTGTAAGGCATTTACACCACTGTTCCTACAAATCTCATTaGGAGCAAATCTTCAACCCTCTAGACTTTCCCTGGCATCCCTCA +
Preference number: 5 (lower is better)
Translates to: DETVRHLHHCSYKSH*EQIFNPLDFPWHPS
Trigger: TGAGGGATGCCAGGGAAAGTCTAGAGGGTTGAAGATTTGCTCCCAATGAGATTTGTAGGAACAGTGGTGTAAATGCCTTACAGTCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCGGAGTTCATGGCACTTaGCACCTCTGCTGCACCACA +
Preference number: 5 (lower is better)
Translates to: PNDRKKTRIIGKMITENSGVHGT*HLCCTT
Trigger: TGTGGTGCAGCAGAGGTGCAAAGTGCCATGAACTCC...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCAGCTGTCAGTTTCCCTaGATGCTTTCTTCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: SSDPPTSISSVFGITCASSCQFP*MLSSFA
Trigger: TGCAAAGGAAGAAAGCATCAAGGGAAACTGACAGCT...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGTGTCATTCTGACCACTaGGGTCCAGGAAAAGTGATT +
Preference number: 5 (lower is better)
Translates to: RKLERTKPQKNRKQILGRCHSDH*GPGKVI
Trigger: AATCACTTTTCCTGGACCCAAGTGGTCAGAATGACA...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCTGTCATTCTGACCACTaGGGTCCAGGAAAAGTGATT +
Preference number: 5 (lower is better)
Translates to: SSDPPTSISSVFGITCASCHSDH*GPGKVI
Trigger: AATCACTTTTCCTGGACCCAAGTGGTCAGAATGACA...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGTCCTCCAAAGATGGGTaGGCTACAGGATGTATTCTT +
Preference number: 5 (lower is better)
Translates to: RKLERTKPQKNRKQILGRSSKDG*ATGCIL
Trigger: AAGAATACATCCTGTAGCCAACCCATCTTTGGAGGA...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCTTTGGGCTGCTTCTCTaGGCAGCTTCTGAAAATAGA +
Preference number: 5 (lower is better)
Translates to: SSDPPTSISSVFGITCASFGLLL*AASENR
Trigger: TCTATTTTCAGAAGCTGCCAAGAGAAGCAGCCCAAA...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGTTCCTACAAATCTCATaGGGAGCAAATCTTCAACCC +
Preference number: 5 (lower is better)
Translates to: RKLERTKPQKNRKQILGRFLQIS*GANLQP
Trigger: GGGTTGAAGATTTGCTCCCAATGAGATTTGTAGGAA...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGGAAAGAGTTCCCCCTTaGCTTCTTTCTTTCATGGAA +
Preference number: 5 (lower is better)
Translates to: RKLERTKPQKNRKQILGRERVPP*LLSFME
Trigger: TTCCATGAAAGAAAGAAGCAAAGGGGGAACTCTTTC...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGCCTTGGGGGCTAATTTaGTCTTTTTCATTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: RKLERTKPQKNRKQILGRPWGLI*SFSFPL
Trigger: GAGAGGAAATGAAAAAGACAAAATTAGCCCCCAAGG...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp GTGTCTCTCGTTCAGATTGTCCCTTTGGGGCAATGCCTTATGAGGCCATGTGATAGTCTCTGTTGCATTTaGGGAAAATTATGCATTCCA +
Preference number: 5 (lower is better)
Translates to: VSLVQIVPLGQCLMRPCDSLCCI*GKLCIP
Trigger: TGGAATGCATAATTTTCCCAAAATGCAACAGAGACT...ATCACATGGCCTCATAAGGCATTGCCCCAAAGGGACAATCTGAACGAGAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCAGATCACAGGAGCTTTaGAAGGCCAGAGCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: PNDRKKTRIIGKMITENSRSQEL*KARAED
Trigger: ATCCTCAGCTCTGGCCTTCAAAAGCTCCTGTGATCT...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp TCAAGCGATCCTCCCACCTCAATCTCTTCAGTTTTTGGGATTACATGTGCAAGCGTATCAGGCCTGGTCTaGTCTCAGAAATATAATTCT +
Preference number: 5 (lower is better)
Translates to: SSDPPTSISSVFGITCASVSGLV*SQKYNS
Trigger: AGAATTATATTTCTGAGACAAGACCAGGCCTGATAC...GCTTGCACATGTAATCCCAAAAACTGAAGAGATTGAGGTGGGAGGATCGCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGGTATCAGGCCTGGTCTaGTCTCAGAAATATAATTCT +
Preference number: 5 (lower is better)
Translates to: RKLERTKPQKNRKQILGRVSGLV*SQKYNS
Trigger: AGAATTATATTTCTGAGACAAGACCAGGCCTGATAC...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCAAGAAAACAGTGCATTaGGAGAGGGGGTGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: PNDRKKTRIIGKMITENSKKTVH*ERGWEE
Trigger: TTCCTCCCACCCCCTCTCCAAATGCACTGTTTTCTT...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGAATAAACAACTATGTTaGCCTCCTGCAAGATTCTCG +
Preference number: 5 (lower is better)
Translates to: RKLERTKPQKNRKQILGRNKQLC*PPARFS
Trigger: CGAGAATCTTGCAGGAGGCAAACATAGTTGTTTATT...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGGTATTTTTCCCCACTTaGTGGAAGGCAATAAACAAC +
Preference number: 5 (lower is better)
Translates to: RKLERTKPQKNRKQILGRVFFPT*WKAINN
Trigger: GTTGTTTATTGCCTTCCACAAAGTGGGGAAAAATAC...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGTTTCATTTCCTCTCCTaGTGGTTTAATCTGTCACTG +
Preference number: 5 (lower is better)
Translates to: RKLERTKPQKNRKQILGRFHFLS*WFNLSL
Trigger: CAGTGACAGATTAAACCACAAGGAGAGGAAATGAAA...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCTGGATGACAGACGTATaGCCTGCTACAACTGCAGCA +
Preference number: 5 (lower is better)
Translates to: PNDRKKTRIIGKMITENSWMTDV*PATTAA
Trigger: TGCTGCAGTTGTAGCAGGCAATACGTCTGTCATCCA...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCCTGGCATCCCTCACTTaGATCTCTGTTTCCACAACA +
Preference number: 5 (lower is better)
Translates to: PNDRKKTRIIGKMITENSLASLT*ISVSTT
Trigger: TGTTGTGGAAACAGAGATCAAAGTGAGGGATGCCAG...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCCCAGTTGTTGATATTTaGGGCTGCTTCTCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: PNDRKKTRIIGKMITENSPVVDI*GCFSWQ
Trigger: CTGCCAAGAGAAGCAGCCCAAAATATCAACAACTGG...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCCTTTTGGCATCTGTTTaGCTGAGGGGAAGTCCACTA +
Preference number: 5 (lower is better)
Translates to: PNDRKKTRIIGKMITENSLLASV*LRGSPL
Trigger: TAGTGGACTTCCCCTCAGCAAAACAGATGCCAAAAG...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp AGGAAGCTTGAGAGAACTAAGCCTCAAAAGAACAGAAAGCAGATCCTGGGTAGGTTTGAATATTCTCTTTaGGCATCTGTTTTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: RKLERTKPQKNRKQILGRFEYSL*ASVLLR
Trigger: CCTCAGCAAAACAGATGCCAAAAGAGAATATTCAAA...CCTACCCAGGATCTGCTTTCTGTTCTTTTGAGGCTTAGTTCTCTCAAGCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCAGACTTGACATGTTCTaGGTTCTAAGCGGTGGTCTA +
Preference number: 5 (lower is better)
Translates to: PNDRKKTRIIGKMITENSRLDMF*VLSGGL
Trigger: TAGACCACCGCTTAGAACCAAGAACATGTCAAGTCT...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCAGAAGCAGCTTGGGTTaGCAATCAGTACGATCCATA +
Preference number: 5 (lower is better)
Translates to: PNDRKKTRIIGKMITENSRSSLG*QSVRSI
Trigger: TATGGATCGTACTGATTGCAAACCCAAGCTGCTTCT...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCTTTGGGCTGCTTCTCTaGGCAGCTTCTGAAAATAGA +
Preference number: 5 (lower is better)
Translates to: PNDRKKTRIIGKMITENSFGLLL*AASENR
Trigger: TCTATTTTCAGAAGCTGCCAAGAGAAGCAGCCCAAA...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCGAAAGAGTTCCCCCTTaGCTTCTTTCTTTCATGGAA +
Preference number: 5 (lower is better)
Translates to: PNDRKKTRIIGKMITENSERVPP*LLSFME
Trigger: TTCCATGAAAGAAAGAAGCAAAGGGGGAACTCTTTC...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCATTGGAAAGACTCTATaGCAAATGCCTGTTCAACGT +
Preference number: 5 (lower is better)
Translates to: PNDRKKTRIIGKMITENSIGKTL*QMPVQR
Trigger: ACGTTGAACAGGCATTTGCAATAGAGTCTTTCCAAT...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS-3UTR CAA 90 bp CCTAATGATAGAAAGAAGACCAGAATCATAGGTAAGATGATCACTGAGAACAGCTTTCATTTCCTCTCCTaGTGGTTTAATCTGTCACTG +
Preference number: 5 (lower is better)
Translates to: PNDRKKTRIIGKMITENSFHFLS*WFNLSL
Trigger: CAGTGACAGATTAAACCACAAGGAGAGGAAATGAAA...GCTGTTCTCAGTGATCATCTTACCTATGATTCTGGTCTTCTTTCTATCATTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS GCA 72 bp TTGTCATGCCCTTGTGACAGTACCTGCGTTGGACTCTaGTGTGGCAATGAGCTATGTGTGTGGTATCAGGCC +
Preference number: 6 (lower is better)
Translates to: LSCPCDSTCVGL*CGNELCVWYQA
Trigger: GGCCTGATACCACACACATAGCTCATTGCCACAGCAGAGTCCAACGCAGGTACTGTCACAAGGGCATGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1
CDS TCA 72 bp ATGATTGTAAGTTTCCTGAGGCCTCCTCAGCCATGCTaGACTGTGAGTCAACTAAACCTGTGGTATCAGGCC +
Preference number: 6 (lower is better)
Translates to: MIVSFLRPPQPC*TVSQLNLWYQA
Trigger: GGCCTGATACCACAGGTTTAGTTGACTCACAGTTCAGCATGGCTGAGGAGGCCTCAGGAAACTTACAATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641779.1
ENST00000642152.1
CDS CCA 72 bp TGCTGTGGCAATGAGCTATGTGTGTGGTATCAGGCCTaGTCTTGTCTCAGAAATATAATTCTATTTAGAGAA +
Preference number: 6 (lower is better)
Translates to: CCGNELCVWYQA*SCLRNIILFRE
Trigger: TTCTCTAAATAGAATTATATTTCTGAGACAAGACCAGGCCTGATACCACACACATAGCTCATTGCCACAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641693.1
ENST00000645588.1