Pregenerated sensors for OR2A42 (Homo sapiens)
Ensembl gene IDs: ENSG00000212807Ensembl transcript IDs: ENST00000641810.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | TCAGCCTCCCGAATAGCTGGGGATGTAGGCACACGTTaGCATGCCCGGCTAGATAATTTACAAAAACACTTT | + |
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Preference number: 3 (lower is better) Translates to: SASRIAGDVGTR*HARLDNLQKHF Trigger: AAAGTGTTTTTGTAAATTATCTAGCCGGGCATGGCAACGTGTGCCTACATCCCCAGCTATTCGGGAGGCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641810.1 |
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| 3UTR-3UTR CAA 90 bp | GAGGTCCTCTGCAAGAGAGTGGCTCAGAATTTATTTACAGTCAGACTGCCTGGTGGTTCAGCAGTCATATaGCCTAAGTTTGATTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: EVLCKRVAQNLFTVRLPGGSAVI*PKFDSG Trigger: TCCAGAATCAAACTTAGGCAATATGACTGCTGAACC...ACCAGGCAGTCTGACTGTAAATAAATTCTGAGCCACTCTCTTGCAGAGGACCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641810.1 |
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| 3UTR-3UTR CAA 90 bp | GAATATCAGGAGGTCCTCTGCAAGAGAGTGGCTCAGAATTTATTTACAGTCAGAGTGTCCATTTGCATCTaGCTTTGGGTTTTCAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: EYQEVLCKRVAQNLFTVRVSICI*LWVFSG Trigger: GCCACTGAAAACCCAAAGCAAGATGCAAATGGACAC...TCTGACTGTAAATAAATTCTGAGCCACTCTCTTGCAGAGGACCTCCTGATATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641810.1 |
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| 3UTR TCA 72 bp | GGCTCAGAATTTATTTACAGTCAGACTGCCTGGTCTTaGTTCATGTTTCTACCACTGAATGATTTGGCGACC | + |
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Preference number: 3 (lower is better) Translates to: GSEFIYSQTAWS*FMFLPLNDLAT Trigger: GGTCGCCAAATCATTCAGTGGTAGAAACATGAATCAAGACCAGGCAGTCTGACTGTAAATAAATTCTGAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641810.1 |
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| 3UTR-3UTR CAA 90 bp | GAATATCAGGAGGTCCTCTGCAAGAGAGTGGCTCAGAATTTATTTACAGTCAGACTACCACTGAATGATTaGGCGACCTTGAATAAATTA | + |
|
Preference number: 3 (lower is better) Translates to: EYQEVLCKRVAQNLFTVRLPLND*ATLNKL Trigger: TAATTTATTCAAGGTCGCCAAATCATTCAGTGGTAG...TCTGACTGTAAATAAATTCTGAGCCACTCTCTTGCAGAGGACCTCCTGATATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641810.1 |
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| 3UTR TCA 72 bp | AACAGCTTCCATATGCATAATTTTCAGATGAAGGACTaGAGCTTAAGCAGTTTAAGGGACTTCTCTGCAAAA | + |
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Preference number: 3 (lower is better) Translates to: NSFHMHNFQMKD*SLSSLRDFSAK Trigger: TTTTGCAGAGAAGTCCCTTAAACTGCTTAAGCTTCAGTCCTTCATCTGAAAATTATGCATATGGAAGCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641810.1 |
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| CDS-3UTR CCA 90 bp | GAGGTCCTCTGCAAGAGAGTGGCTCAGAATTTATTTACAGTCAGACTGCCTGGTCAGGCTGGAATGCAGTaGTGCGATCATGGCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: EVLCKRVAQNLFTVRLPGQAGMQ*CDHGSL Trigger: CAGTGAGCCATGATCGCACCACTGCATTCCAGCCTG...ACCAGGCAGTCTGACTGTAAATAAATTCTGAGCCACTCTCTTGCAGAGGACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641810.1 |
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| CDS-3UTR TCA 90 bp | GAGGTCCTCTGCAAGAGAGTGGCTCAGAATTTATTTACAGTCAGACTGCCTGGTCAACCATTCAGGAGATaGATATCAGGAGGTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: EVLCKRVAQNLFTVRLPGQPFRR*ISGGPL Trigger: CAGAGGACCTCCTGATATTCATCTCCTGAATGGTTG...ACCAGGCAGTCTGACTGTAAATAAATTCTGAGCCACTCTCTTGCAGAGGACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641810.1 |
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| CDS-3UTR TCA 90 bp | GAGGTCCTCTGCAAGAGAGTGGCTCAGAATTTATTTACAGTCAGACTGCCTGGTATTGAGTGTCTACTATaGACAGGCCTGTTGCCAACC | + |
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Preference number: 4 (lower is better) Translates to: EVLCKRVAQNLFTVRLPGIECLL*TGLLPT Trigger: GGTTGGCAACAGGCCTGTTCATAGTAGACACTCAAT...ACCAGGCAGTCTGACTGTAAATAAATTCTGAGCCACTCTCTTGCAGAGGACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641810.1 |
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| CDS-3UTR TCA 90 bp | GAATATCAGGAGGTCCTCTGCAAGAGAGTGGCTCAGAATTTATTTACAGTCAGACAGACTGCCTGGTCTTaGTTCATGTTTCTACCACTG | + |
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Preference number: 4 (lower is better) Translates to: EYQEVLCKRVAQNLFTVRQTAWS*FMFLPL Trigger: CAGTGGTAGAAACATGAATCAAGACCAGGCAGTCTG...TCTGACTGTAAATAAATTCTGAGCCACTCTCTTGCAGAGGACCTCCTGATATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641810.1 |
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| CDS-3UTR CCA 90 bp | GAGGTCCTCTGCAAGAGAGTGGCTCAGAATTTATTTACAGTCAGACTGCCTGGTCCTATCAATGTGCAGTaGATGGTGCAGAGTAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: EVLCKRVAQNLFTVRLPGPINVQ*MVQSNL Trigger: TAAATTACTCTGCACCATCCACTGCACATTGATAGG...ACCAGGCAGTCTGACTGTAAATAAATTCTGAGCCACTCTCTTGCAGAGGACCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641810.1 |
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| CDS-3UTR CCA 90 bp | GAATATCAGGAGGTCCTCTGCAAGAGAGTGGCTCAGAATTTATTTACAGTCAGAAGTCCCACATTGTCCTaGTTAAGTAAAGAAGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: EYQEVLCKRVAQNLFTVRSPTLS*LSKEGL Trigger: CAAGCCTTCTTTACTTAACCAGGACAATGTGGGACT...TCTGACTGTAAATAAATTCTGAGCCACTCTCTTGCAGAGGACCTCCTGATATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641810.1 |
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| CDS-3UTR TCA 90 bp | GAATATCAGGAGGTCCTCTGCAAGAGAGTGGCTCAGAATTTATTTACAGTCAGACTCATAGGGTTTTTATaGGGACTTAAAGAGCTCTTA | + |
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Preference number: 4 (lower is better) Translates to: EYQEVLCKRVAQNLFTVRLIGFL*GLKELL Trigger: TAAGAGCTCTTTAAGTCCTCATAAAAACCCTATGAG...TCTGACTGTAAATAAATTCTGAGCCACTCTCTTGCAGAGGACCTCCTGATATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641810.1 |
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| CDS-3UTR CAA 90 bp | GAATATCAGGAGGTCCTCTGCAAGAGAGTGGCTCAGAATTTATTTACAGTCAGATCAGACTGCCTGGTCTaGATTCATGTTTCTACCACT | + |
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Preference number: 5 (lower is better) Translates to: EYQEVLCKRVAQNLFTVRSDCLV*IHVSTT Trigger: AGTGGTAGAAACATGAATCAAGACCAGGCAGTCTGA...TCTGACTGTAAATAAATTCTGAGCCACTCTCTTGCAGAGGACCTCCTGATATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641810.1 |
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| CDS-3UTR CAA 90 bp | GAATATCAGGAGGTCCTCTGCAAGAGAGTGGCTCAGAATTTATTTACAGTCAGAGGTTCAGCAGTCATATaGCCTAAGTTTGATTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: EYQEVLCKRVAQNLFTVRGSAVI*PKFDSG Trigger: TCCAGAATCAAACTTAGGCAATATGACTGCTGAACC...TCTGACTGTAAATAAATTCTGAGCCACTCTCTTGCAGAGGACCTCCTGATATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641810.1 |
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