Pregenerated sensors for OR1N1 (Homo sapiens)
Ensembl gene IDs: ENSG00000171505Ensembl transcript IDs: ENST00000304880.2, ENST00000619659.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TGTCCTTCTCTTCAGAGGCAATGGAGGGAGGACACAGGTAGGCACTaGAGAGGGTCCCATAGAACACACAAACAACGCAGAGGTGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: CPSLQRQWREDTGRH*RGSHRTHKQRRGGN Trigger: GTTCCCACCTCTGCGTTGTTTGTGTGTTCTATGGGACCCTCTTCAGTGCCTACCTGTGTCCTCCCTCCATTGCCTCTGAAGAGAAGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000304880.2 ENST00000619659.1 |
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| CDS GCA 90 bp | GTCAAGGTGACAAGATACATACACAGGAAAATTCCGAAGAGGGACTaGTGTTGCTCTGGAGGCGCTGATATTCCTCGGAGGAAAAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: VKVTRYIHRKIPKRD*CCSGGADIPRRKNS Trigger: TGAATTTTTCCTCCGAGGAATATCAGCGCCTCCAGAGCAACAGCAGTCCCTCTTCGGAATTTTCCTGTGTATGTATCTTGTCACCTTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000304880.2 ENST00000619659.1 |
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| CDS TCA 72 bp | CTTCAGAGGCAATGGAGGGAGGACACAGGTAGGCACTaGAGAGGGTCCCATAGAACACACAAACAACGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LQRQWREDTGRH*RGSHRTHKQRR Trigger: TCTGCGTTGTTTGTGTGTTCTATGGGACCCTCTTCAGTGCCTACCTGTGTCCTCCCTCCATTGCCTCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000304880.2 ENST00000619659.1 |
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| CDS GCA 72 bp | ACAAGATACATACACAGGAAAATTCCGAAGAGGGACTaGTGTTGCTCTGGAGGCGCTGATATTCCTCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: TRYIHRKIPKRD*CCSGGADIPRR Trigger: CCTCCGAGGAATATCAGCGCCTCCAGAGCAACAGCAGTCCCTCTTCGGAATTTTCCTGTGTATGTATCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000304880.2 ENST00000619659.1 |
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| CDS TCA 72 bp | AATTCCGAAGAGGGACTGCTGTTGCTCTGGAGGCGCTaGTATTCCTCGGAGGAAAAATTCAGAAATGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: NSEEGLLLLWRR*YSSEEKFRNAG Trigger: TCCAGCATTTCTGAATTTTTCCTCCGAGGAATATCAGCGCCTCCAGAGCAACAGCAGTCCCTCTTCGGAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000304880.2 ENST00000619659.1 |
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