Pregenerated sensors for OR1L8 (Homo sapiens)
Ensembl gene IDs: ENSG00000171496Ensembl transcript IDs: ENST00000641027.1
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAGAAGTGCTAGCTTCCAAAACACGTCCAAGTTaGGCAGATTCCACTTACGAG | + |
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Preference number: 2 (lower is better) Translates to: DVSAHNSLVSHGSEVLASKTRPS*ADSTYE Trigger: CTCGTAAGTGGAATCTGCTCAACTTGGACGTGTTTT...GGAAGCTAGCACTTCTGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR TCA 90 bp | GTTGGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTTGCCACGTGGTCCTTaGCAGCGTAGGTGGATGGGG | + |
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Preference number: 4 (lower is better) Translates to: VGSSSMDVSAHNSLVSHGLPRGP*QRRWMG Trigger: CCCCATCCACCTACGCTGTCAAGGACCACGTGGCAA...CCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CCA 90 bp | GTTGGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGACCAGCAGGACACAGTaGTGGTGGCTCATGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: VGSSSMDVSAHNSLVSHGTSRTQ*WWLMVV Trigger: CACCACCATGAGCCACCACCACTGTGTCCTGCTGGT...CCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR GCA 90 bp | GTTGGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGAGTGAGTTGAGATCATaGCACGGCACTCCAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: VGSSSMDVSAHNSLVSHGSELRS*HGTPAW Trigger: CCAGGCTGGAGTGCCGTGGCATGATCTCAACTCACT...CCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CCA 90 bp | GATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAGAAGTGCTAGCTTCCACAAAGAGTGTCTTTTaGTCCTCAGGCCGGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: DVSAHNSLVSHGSEVLASTKSVF*SSGREE Trigger: CTCCTCCCGGCCTGAGGACCAAAAGACACTCTTTGT...GGAAGCTAGCACTTCTGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CCA 90 bp | GGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAAGCAGGACACAGTGGTaGTGGCTCATGGTGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: GSSSMDVSAHNSLVSHGSSRTQW*WLMVVT Trigger: TGTCACCACCATGAGCCACCACCACTGTGTCCTGCT...TGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR TCA 90 bp | TCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAGAATCACCTCATGGTCCTTaGTGGGGTCCTCCCTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SSSMDVSAHNSLVSHGSESPHGP*WGPPFP Trigger: TGGGAAGGGAGGACCCCATCAAGGACCATGAGGTGA...TTCTGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR GCA 90 bp | GGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAGTCAAAGGCCATGACTaGCAGAAGGCAGCTGTCACT | + |
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Preference number: 4 (lower is better) Translates to: GSSSMDVSAHNSLVSHGSVKGHD*QKAAVT Trigger: AGTGACAGCTGCCTTCTGGCAGTCATGGCCTTTGAC...TGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR TCA 90 bp | GGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCATGGAGTCACAGAAGGTaGGACGATTCAGCAGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: GSSSMDVSAHNSLVSHGSWSHRR*DDSAEV Trigger: CACTTCTGCTGAATCGTCTCACCTTCTGTGACTCCA...TGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR TCA 90 bp | GGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAATTTCAGCACAGGGCTaGGGTCACAGAGAAAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: GSSSMDVSAHNSLVSHGSISAQG*GHRESG Trigger: ACCACTTTCTCTGTGACCTCAGCCCTGTGCTGAAAT...TGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR TCA 90 bp | TGTTCACCAGAAACCAGTAGAAAACACGTCCAAGTTGAGCAGATTCCACTTACGAGAGCGTCACCACGGTaGGGTAAAAACCACAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: CSPETSRKHVQVEQIPLTRASPR*GKNHRW Trigger: CCACCTGTGGTTTTTACCTCACCGTGGTGACGCTCT...CGTAAGTGGAATCTGCTCAACTTGGACGTGTTTTCTACTGGTTTCTGGTGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CCA 90 bp | GTTCACCAGAAACCAGTAGAAAACACGTCCAAGTTGAGCAGATTCCACTTACGATCTGTCTCTCCAATTTaGGGGGCAGTGGGTTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: VHQKPVENTSKLSRFHLRSVSPI*GAVGCR Trigger: ACGGCAACCCACTGCCCCCCAAATTGGAGAGACAGA...TCGTAAGTGGAATCTGCTCAACTTGGACGTGTTTTCTACTGGTTTCTGGTGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR TCA 90 bp | GTTCACCAGAAACCAGTAGAAAACACGTCCAAGTTGAGCAGATTCCACTTACGAAGGAGTGAGTGGAGGTaGGGAAATGAGCAGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: VHQKPVENTSKLSRFHLRRSEWR*GNEQEK Trigger: CTTCTCCTGCTCATTTCCTCACCTCCACTCACTCCT...TCGTAAGTGGAATCTGCTCAACTTGGACGTGTTTTCTACTGGTTTCTGGTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR GCA 90 bp | GGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAGGCAGCTGTCACTGTTaGCCAAGGCATAGAGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: GSSSMDVSAHNSLVSHGSGSCHC*PRHREN Trigger: ATTTTCTCTATGCCTTGGGCAACAGTGACAGCTGCC...TGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CCA 90 bp | GGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAAGAGGCTTCTGTTTGTaGGTTTCTGCTCCAGTAAGC | + |
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Preference number: 4 (lower is better) Translates to: GSSSMDVSAHNSLVSHGSRGFCL*VSAPVS Trigger: GCTTACTGGAGCAGAAACCCACAAACAGAAGCCTCT...TGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CCA 90 bp | GTTGGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGGAGACACTGCTGGTGTaGTTGATTCTTTCCATTGAC | + |
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Preference number: 4 (lower is better) Translates to: VGSSSMDVSAHNSLVSHGETLLV*LILSID Trigger: GTCAATGGAAAGAATCAACCACACCAGCAGTGTCTC...CCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CCA 90 bp | GATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAGAAGTGCTAGCTTCCTACAGGCCGAATTGTTaGGTCATCATCAATGGATGT | + |
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Preference number: 4 (lower is better) Translates to: DVSAHNSLVSHGSEVLASYRPNC*VIINGC Trigger: ACATCCATTGATGATGACCCAACAATTCGGCCTGTA...GGAAGCTAGCACTTCTGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR TCA 90 bp | TGTTCACCAGAAACCAGTAGAAAACACGTCCAAGTTGAGCAGATTCCACTTACGGTGACCTCACTTCTCTaGTGGATCTGTAATCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: CSPETSRKHVQVEQIPLTVTSLL*WICNPR Trigger: TCTGGGATTACAGATCCATCAGAGAAGTGAGGTCAC...CGTAAGTGGAATCTGCTCAACTTGGACGTGTTTTCTACTGGTTTCTGGTGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR TCA 90 bp | TCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAGAACACTGCTGGTGTGGTTaGTTCTTTCCATTGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: SSSMDVSAHNSLVSHGSEHCWCG*FFPLTW Trigger: CCAAGTCAATGGAAAGAATCAACCACACCAGCAGTG...TTCTGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR TCA 90 bp | TGTTCACCAGAAACCAGTAGAAAACACGTCCAAGTTGAGCAGATTCCACTTACGAAATACATAGGGGTCTaGAGATGGGGGTTGAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: CSPETSRKHVQVEQIPLTKYIGV*RWGLKR Trigger: TCGCTTCAACCCCCATCTTCAGACCCCTATGTATTT...CGTAAGTGGAATCTGCTCAACTTGGACGTGTTTTCTACTGGTTTCTGGTGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR TCA 90 bp | GGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAGATGGTCTTCTTTTCTaGCAGGAAGTTCATCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: GSSSMDVSAHNSLVSHGSDGLLF*QEVHQH Trigger: ATGCTGATGAACTTCCTGTCAGAAAAGAAGACCATC...TGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR GCA 90 bp | GTTGGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTGTGATTTCCAACTCTaGTTCTTAGCCAAAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: VGSSSMDVSAHNSLVSHGCDFQL*FLAKAQ Trigger: CTGAGCTTTGGCTAAGAAGCAGAGTTGGAAATCACA...CCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CCA 90 bp | TCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAGAAGTGCTAATTGTGGGATaGCTTGTTCACCTCATGGTC | + |
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Preference number: 4 (lower is better) Translates to: SSSMDVSAHNSLVSHGSEVLIVG*LVHLMV Trigger: GACCATGAGGTGAACAAGCCATCCCACAATTAGCAC...TTCTGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR TCA 90 bp | TCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAGAACTCATGTTTCTCCTCTaGACTTCTGGACTTAGCACT | + |
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Preference number: 4 (lower is better) Translates to: SSSMDVSAHNSLVSHGSELMFLL*TSGLST Trigger: AGTGCTAAGTCCAGAAGTTCAGAGGAGAAACATGAG...TTCTGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR TCA 90 bp | TGTTCACCAGAAACCAGTAGAAAACACGTCCAAGTTGAGCAGATTCCACTTACGAAAACACGTCCAAGTTaGGCAGATTCCACTTACGAG | + |
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Preference number: 4 (lower is better) Translates to: CSPETSRKHVQVEQIPLTKTRPS*ADSTYE Trigger: CTCGTAAGTGGAATCTGCTCAACTTGGACGTGTTTT...CGTAAGTGGAATCTGCTCAACTTGGACGTGTTTTCTACTGGTTTCTGGTGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR GCA 90 bp | TCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAGAATGTGTAAACAATTGTTaGCACGTGGTCCTTGACAGC | + |
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Preference number: 4 (lower is better) Translates to: SSSMDVSAHNSLVSHGSECVNNC*HVVLDS Trigger: GCTGTCAAGGACCACGTGGCAACAATTGTTTACACA...TTCTGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR TCA 90 bp | GGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCATGCTCCAGTAAGCTGTaGTTCTTTGTATTTTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: GSSSMDVSAHNSLVSHGSCSSKL*FFVFLL Trigger: CAACAAAAATACAAAGAATCACAGCTTACTGGAGCA...TGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR TCA 90 bp | TCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAGAATCTTCTGCACATCTGTaGTTTCCAACTCTGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SSSMDVSAHNSLVSHGSESSAHL*FPTLLL Trigger: AAGAAGCAGAGTTGGAAATCACAGATGTGCAGAAGA...TTCTGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR TCA 90 bp | GGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAATAAGGGCATTATATTaGAATCTCTGTATCCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: GSSSMDVSAHNSLVSHGSIRALY*NLCIQR Trigger: ACGCTGGATACAGAGATTTCAATATAATGCCCTTAT...TGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR TCA 90 bp | GGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAGTTGATTCTTTCCATTaGCTTGGGCTCAGTTATAAA | + |
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Preference number: 4 (lower is better) Translates to: GSSSMDVSAHNSLVSHGSVDSFH*LGLSYK Trigger: TTTATAACTGAGCCCAAGTCAATGGAAAGAATCAAC...TGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR TCA 90 bp | GGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAAGGATTGAGCATGGATaGCAAAACTGTGTAAACAAT | + |
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Preference number: 4 (lower is better) Translates to: GSSSMDVSAHNSLVSHGSRIEHG*QNCVNN Trigger: ATTGTTTACACAGTTTTGTCATCCATGCTCAATCCT...TGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR GCA 90 bp | GTTCACCAGAAACCAGTAGAAAACACGTCCAAGTTGAGCAGATTCCACTTACGAAGTTTTTCAAGAGGGTaGTTCCTAGGATCTCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: VHQKPVENTSKLSRFHLRSFSRG*FLGSLA Trigger: AGCAAGAGATCCTAGGAAGCACCCTCTTGAAAAACT...TCGTAAGTGGAATCTGCTCAACTTGGACGTGTTTTCTACTGGTTTCTGGTGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CCA 90 bp | TGTTCACCAGAAACCAGTAGAAAACACGTCCAAGTTGAGCAGATTCCACTTACGATGTGTCTCAAGAAGTaGATCTTCTGCACATCTGTG | + |
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Preference number: 4 (lower is better) Translates to: CSPETSRKHVQVEQIPLTMCLKK*IFCTSV Trigger: CACAGATGTGCAGAAGATCCACTTCTTGAGACACAT...CGTAAGTGGAATCTGCTCAACTTGGACGTGTTTTCTACTGGTTTCTGGTGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| 3UTR CAA 72 bp | ACTGTTCACCAGAAACCAGTAGAAAACACGTCCAAGTaGAGCAGATTCCACTTACGAGTTTTTCAAGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: TVHQKPVENTSK*SRFHLRVFQEG Trigger: ACCCTCTTGAAAAACTCGTAAGTGGAATCTGCTCAACTTGGACGTGTTTTCTACTGGTTTCTGGTGAACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR GCA 90 bp | TGTTCACCAGAAACCAGTAGAAAACACGTCCAAGTTGAGCAGATTCCACTTACGAATAGACACAGAAGATaGTTCCATAAAAGAGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: CSPETSRKHVQVEQIPLTNRHRR*FHKRAS Trigger: TGACGCTCTTTTATGGAAGCATCTTCTGTGTCTATT...CGTAAGTGGAATCTGCTCAACTTGGACGTGTTTTCTACTGGTTTCTGGTGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR GCA 90 bp | GTTCACCAGAAACCAGTAGAAAACACGTCCAAGTTGAGCAGATTCCACTTACGAGAATTTTGGAGGATCTaGCTTAATAAAAGGAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: VHQKPVENTSKLSRFHLREFWRI*LNKRRE Trigger: TTCTCTCCTTTTATTAAGGCAGATCCTCCAAAATTC...TCGTAAGTGGAATCTGCTCAACTTGGACGTGTTTTCTACTGGTTTCTGGTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CAA 90 bp | GGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCATTCACCTCATGGTCCTaGATGGGGTCCTCCCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: GSSSMDVSAHNSLVSHGSFTSWS*MGSSLP Trigger: GGGAAGGGAGGACCCCATCAAGGACCATGAGGTGAA...TGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CAA 90 bp | GGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAGGAGATTGCAGTGAGTaGAGATCATGCCACGGCACT | + |
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Preference number: 5 (lower is better) Translates to: GSSSMDVSAHNSLVSHGSGDCSE*RSCHGT Trigger: AGTGCCGTGGCATGATCTCAACTCACTGCAATCTCC...TGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CAA 90 bp | GGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAAACAAAGAGTGTCTTTaGGTCCTCAGGCCGGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: GSSSMDVSAHNSLVSHGSNKECL*VLRPGG Trigger: TCCTCCCGGCCTGAGGACCAAAAGACACTCTTTGTT...TGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CAA 90 bp | GTTGGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGGTGCCCACAATAGCCTaGTCTCACATGGGTCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: VGSSSMDVSAHNSLVSHGVPTIA*SHMGQK Trigger: CTTCTGACCCATGTGAGACAAGGCTATTGTGGGCAC...CCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS TCA 90 bp | GCATGGATGACAAAACTGTGTAAACAATTGTTGCCACGTGGTCCTTaGCAGCGTAGGTGGATGGGGGCTGTAAATAGACACAGAAGATGC | + |
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Preference number: 5 (lower is better) Translates to: AWMTKLCKQLLPRGP*QRRWMGAVNRHRRC Trigger: GCATCTTCTGTGTCTATTTACAGCCCCCATCCACCTACGCTGTCAAGGACCACGTGGCAACAATTGTTTACACAGTTTTGTCATCCATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS GCA 90 bp | CACGTCCAAGTTGAGCAGATTCCACTTACGAGTTTTTCAAGAGGGTaGTTCCTAGGATCTCTTGCTCATAAGCTTCCTCAGGCCCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: HVQVEQIPLTSFSRG*FLGSLAHKLPQALF Trigger: AAACAGGGCCTGAGGAAGCTTATGAGCAAGAGATCCTAGGAAGCACCCTCTTGAAAAACTCGTAAGTGGAATCTGCTCAACTTGGACGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS CCA 90 bp | GTTTCTTCTGTTTGGTCACAATTAGCTACTGTGCTAATTGTGGGATaGCTTGTTCACCTCATGGTCCTTGATGGGGTCCTCCCTTCCCAA | + |
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Preference number: 5 (lower is better) Translates to: VSSVWSQLATVLIVG*LVHLMVLDGVLPSQ Trigger: TTGGGAAGGGAGGACCCCATCAAGGACCATGAGGTGAACAAGCCATCCCACAATTAGCACAGTAGCTAATTGTGACCAAACAGAAGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CAA 90 bp | GATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAGAAGTGCTAGCTTCCATACAGGCCGAATTGTaGGGTCATCATCAATGGATG | + |
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Preference number: 5 (lower is better) Translates to: DVSAHNSLVSHGSEVLASIQAEL*GHHQWM Trigger: CATCCATTGATGATGACCCAACAATTCGGCCTGTAT...GGAAGCTAGCACTTCTGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CAA 90 bp | GTTGGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGAAGTTCATCAGCATCTaGGGGACAACGCTTGTTGTA | + |
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Preference number: 5 (lower is better) Translates to: VGSSSMDVSAHNSLVSHGKFISI*GTTLVV Trigger: TACAACAAGCGTTGTCCCCAAGATGCTGATGAACTT...CCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CAA 90 bp | GATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAGAAGTGCTAGCTTCCGAAGTAGAGGGAATCTaGAGAACTGTAGTGAGGATT | + |
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Preference number: 5 (lower is better) Translates to: DVSAHNSLVSHGSEVLASEVEGI*RTVVRI Trigger: AATCCTCACTACAGTTCTCAAGATTCCCTCTACTTC...GGAAGCTAGCACTTCTGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CAA 90 bp | GGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAGAAAACACGTCCAAGTaGAGCAGATTCCACTTACGA | + |
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Preference number: 5 (lower is better) Translates to: GSSSMDVSAHNSLVSHGSENTSK*SRFHLR Trigger: TCGTAAGTGGAATCTGCTCAACTTGGACGTGTTTTC...TGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS GCA 90 bp | GTGTCTCAAGAAGTGGATCTTCTGCACATCTGTGATTTCCAACTCTaGTTCTTAGCCAAAGCTCAGCTTCCTCATGTTTCTCCTCTGAAC | + |
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Preference number: 5 (lower is better) Translates to: VSQEVDLLHICDFQL*FLAKAQLPHVSPLN Trigger: GTTCAGAGGAGAAACATGAGGAAGCTGAGCTTTGGCTAAGAAGCAGAGTTGGAAATCACAGATGTGCAGAAGATCCACTTCTTGAGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CAA 90 bp | GATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAGAAGTGCTAGCTTCCCATAAGGGCATTATATaGAAATCTCTGTATCCAGCG | + |
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Preference number: 5 (lower is better) Translates to: DVSAHNSLVSHGSEVLASHKGII*KSLYPA Trigger: CGCTGGATACAGAGATTTCAATATAATGCCCTTATG...GGAAGCTAGCACTTCTGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CAA 90 bp | TGTTCACCAGAAACCAGTAGAAAACACGTCCAAGTTGAGCAGATTCCACTTACGGAACCTAGCAAGTCTTaGTTTCTTCTGTTTGGTCAC | + |
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Preference number: 5 (lower is better) Translates to: CSPETSRKHVQVEQIPLTEPSKS*FLLFGH Trigger: GTGACCAAACAGAAGAAACAAAGACTTGCTAGGTTC...CGTAAGTGGAATCTGCTCAACTTGGACGTGTTTTCTACTGGTTTCTGGTGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CAA 90 bp | GGGTCATCATCAATGGATGTAAGTGCCCACAATAGCCTTGTCTCACATGGGTCAATTCTTTCCATTGACTaGGGCTCAGTTATAAACAAG | + |
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Preference number: 5 (lower is better) Translates to: GSSSMDVSAHNSLVSHGSILSID*GSVINK Trigger: CTTGTTTATAACTGAGCCCAAGTCAATGGAAAGAAT...TGACCCATGTGAGACAAGGCTATTGTGGGCACTTACATCCATTGATGATGACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS-3UTR CAA 90 bp | TGTTCACCAGAAACCAGTAGAAAACACGTCCAAGTTGAGCAGATTCCACTTACGCTTTGTTTCTTCTGTTaGGTCACAATTAGCTACTGT | + |
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Preference number: 5 (lower is better) Translates to: CSPETSRKHVQVEQIPLTLCFFC*VTISYC Trigger: ACAGTAGCTAATTGTGACCAAACAGAAGAAACAAAG...CGTAAGTGGAATCTGCTCAACTTGGACGTGTTTTCTACTGGTTTCTGGTGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS TCA 90 bp | GAGGATAAACTCGGAGACACTGCTGGTGTGGTTGATTCTTTCCATTaGCTTGGGCTCAGTTATAAACAAGAAGTTTTGTCATTTAACATG | + |
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Preference number: 5 (lower is better) Translates to: EDKLGDTAGVVDSFH*LGLSYKQEVLSFNM Trigger: CATGTTAAATGACAAAACTTCTTGTTTATAACTGAGCCCAAGTCAATGGAAAGAATCAACCACACCAGCAGTGTCTCCGAGTTTATCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS TCA 90 bp | CTTGGGCTCAGTTATAAACAAGAAGTTTTGTCATTTAACATGCTCTaGTTTCATAACACCAATCATGAGAACCTAGCAAGTCTTTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: LGLSYKQEVLSFNML*FHNTNHENLASLCF Trigger: GAAACAAAGACTTGCTAGGTTCTCATGATTGGTGTTATGAAATCAGAGCATGTTAAATGACAAAACTTCTTGTTTATAACTGAGCCCAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS CCA 72 bp | GTTTGGTCACAATTAGCTACTGTGCTAATTGTGGGATaGCTTGTTCACCTCATGGTCCTTGATGGGGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VWSQLATVLIVG*LVHLMVLDGVL Trigger: GAGGACCCCATCAAGGACCATGAGGTGAACAAGCCATCCCACAATTAGCACAGTAGCTAATTGTGACCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS TCA 72 bp | ACAAAACTGTGTAAACAATTGTTGCCACGTGGTCCTTaGCAGCGTAGGTGGATGGGGGCTGTAAATAGACAC | + |
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Preference number: 6 (lower is better) Translates to: TKLCKQLLPRGP*QRRWMGAVNRH Trigger: GTGTCTATTTACAGCCCCCATCCACCTACGCTGTCAAGGACCACGTGGCAACAATTGTTTACACAGTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS TCA 72 bp | CCATGTGTCTCAAGAAGTGGATCTTCTGCACATCTGTaGTTTCCAACTCTGCTTCTTAGCCAAAGCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PCVSRSGSSAHL*FPTLLLSQSSA Trigger: AGCTGAGCTTTGGCTAAGAAGCAGAGTTGGAAATCACAGATGTGCAGAAGATCCACTTCTTGAGACACATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS GCA 72 bp | GTTGAGCAGATTCCACTTACGAGTTTTTCAAGAGGGTaGTTCCTAGGATCTCTTGCTCATAAGCTTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: VEQIPLTSFSRG*FLGSLAHKLPQ Trigger: CTGAGGAAGCTTATGAGCAAGAGATCCTAGGAAGCACCCTCTTGAAAAACTCGTAAGTGGAATCTGCTCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS CCA 72 bp | GGACTTAGCACTGATTCCTGCAGAGGCTTCTGTTTGTaGGTTTCTGCTCCAGTAAGCTGTGATTCTTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: GLSTDSCRGFCL*VSAPVSCDSLY Trigger: ATACAAAGAATCACAGCTTACTGGAGCAGAAACCCACAAACAGAAGCCTCTGCAGGAATCAGTGCTAAGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS GCA 72 bp | GAAGTGGATCTTCTGCACATCTGTGATTTCCAACTCTaGTTCTTAGCCAAAGCTCAGCTTCCTCATGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: EVDLLHICDFQL*FLAKAQLPHVS Trigger: AGAAACATGAGGAAGCTGAGCTTTGGCTAAGAAGCAGAGTTGGAAATCACAGATGTGCAGAAGATCCACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS CCA 72 bp | CAGCGTTTTTCCTTTGCTTCCATGTGTCTCAAGAAGTaGATCTTCTGCACATCTGTGATTTCCAACTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: QRFSFASMCLKK*IFCTSVISNSA Trigger: AGCAGAGTTGGAAATCACAGATGTGCAGAAGATCCACTTCTTGAGACACATGGAAGCAAAGGAAAAACGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS TCA 72 bp | CTCGGAGACACTGCTGGTGTGGTTGATTCTTTCCATTaGCTTGGGCTCAGTTATAAACAAGAAGTTTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: LGDTAGVVDSFH*LGLSYKQEVLS Trigger: TGACAAAACTTCTTGTTTATAACTGAGCCCAAGTCAATGGAAAGAATCAACCACACCAGCAGTGTCTCCGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS CAA 90 bp | CATAACACCAATCATGAGAACCTAGCAAGTCTTTGTTTCTTCTGTTaGGTCACAATTAGCTACTGTGCTAATTGTGGGATGGCTTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: HNTNHENLASLCFFC*VTISYCANCGMACS Trigger: TGAACAAGCCATCCCACAATTAGCACAGTAGCTAATTGTGACCAAACAGAAGAAACAAAGACTTGCTAGGTTCTCATGATTGGTGTTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS CAA 90 bp | ATAAACTCGGAGACACTGCTGGTGTGGTTGATTCTTTCCATTGACTaGGGCTCAGTTATAAACAAGAAGTTTTGTCATTTAACATGCTCT | + |
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Preference number: 6 (lower is better) Translates to: INSETLLVWLILSID*GSVINKKFCHLTCS Trigger: AGAGCATGTTAAATGACAAAACTTCTTGTTTATAACTGAGCCCAAGTCAATGGAAAGAATCAACCACACCAGCAGTGTCTCCGAGTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS CAA 72 bp | CATTATATTGAAATCTCTGTATCCAGCGTTTTTCCTTaGCTTCCATGTGTCTCAAGAAGTGGATCTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: HYIEISVSSVFP*LPCVSRSGSSA Trigger: TGCAGAAGATCCACTTCTTGAGACACATGGAAGCAAAGGAAAAACGCTGGATACAGAGATTTCAATATAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS CAA 72 bp | AATCATGAGAACCTAGCAAGTCTTTGTTTCTTCTGTTaGGTCACAATTAGCTACTGTGCTAATTGTGGGATG | + |
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Preference number: 6 (lower is better) Translates to: NHENLASLCFFC*VTISYCANCGM Trigger: CATCCCACAATTAGCACAGTAGCTAATTGTGACCAAACAGAAGAAACAAAGACTTGCTAGGTTCTCATGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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| CDS CAA 72 bp | GAGACACTGCTGGTGTGGTTGATTCTTTCCATTGACTaGGGCTCAGTTATAAACAAGAAGTTTTGTCATTTA | + |
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Preference number: 6 (lower is better) Translates to: ETLLVWLILSID*GSVINKKFCHL Trigger: TAAATGACAAAACTTCTTGTTTATAACTGAGCCCAAGTCAATGGAAAGAATCAACCACACCAGCAGTGTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641027.1 |
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