Pregenerated sensors for OR1K1 (Homo sapiens)
Ensembl gene IDs: ENSG00000165204Ensembl transcript IDs: ENST00000277309.3
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAGGGAGTGGACGTGGGACACCAGCCATGCCATTCCCACCAGGGCTaGGCACATGGCCCGGGACATCCTCGTGGCATAGGGGAGGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: EGVDVGHQPCHSHQG*AHGPGHPRGIGEGV Trigger: CACCCCCTCCCCTATGCCACGAGGATGTCCCGGGCCATGTGCGCAGCCCTGGTGGGAATGGCATGGCTGGTGTCCCACGTCCACTCCCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000277309.3 |
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| CDS GCA 90 bp | GGCCCCATAGGAGGCGAGGATGAGCAGGAAGGGAGTGACCACCACTaGGGCGCCCTCGGTGAAGATGAGCAGCTGGATGTGGTGGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: GPIGGEDEQEGSDHH*GALGEDEQLDVVGV Trigger: GACACCCACCACATCCAGCTGCTCATCTTCACCGAGGGCGCCGCAGTGGTGGTCACTCCCTTCCTGCTCATCCTCGCCTCCTATGGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277309.3 |
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| CDS CCA 90 bp | AAGGACAAGCGAGCCATGAGCAGGATATACAGGAGGGAGTGGACGTaGGACACCAGCCATGCCATTCCCACCAGGGCTGCGCACATGGCC | + |
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Preference number: 5 (lower is better) Translates to: KDKRAMSRIYRREWT*DTSHAIPTRAAHMA Trigger: GGCCATGTGCGCAGCCCTGGTGGGAATGGCATGGCTGGTGTCCCACGTCCACTCCCTCCTGTATATCCTGCTCATGGCTCGCTTGTCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277309.3 |
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| CDS CCA 90 bp | AAGGGAGTGACCACCACTGCGGCGCCCTCGGTGAAGATGAGCAGCTaGATGTGGTGGGTGTCAGAGCACGAGAGCCTTAAGAGAGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: KGVTTTAAPSVKMSS*MWWVSEHESLKRGW Trigger: CCAGCCTCTCTTAAGGCTCTCGTGCTCTGACACCCACCACATCCAGCTGCTCATCTTCACCGAGGGCGCCGCAGTGGTGGTCACTCCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277309.3 |
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| CDS TCA 90 bp | ACATGGGTGCATGAAGGGCTGGACTGGCCTGGATGGCAGCCACAATaGGTCCATTACCCAGGAGGCTGGCCACATACAAGAGCAAGAACA | + |
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Preference number: 5 (lower is better) Translates to: TWVHEGLDWPGWQPQ*VHYPGGWPHTRART Trigger: TGTTCTTGCTCTTGTATGTGGCCAGCCTCCTGGGTAATGGACTCATTGTGGCTGCCATCCAGGCCAGTCCAGCCCTTCATGCACCCATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277309.3 |
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| CDS GCA 90 bp | AGGCTGGCCACATACAAGAGCAAGAACAGCACAAAGAGAGGCCGCTaGTGTCCAGGACTTGTTGTCAGTCCCAATAAAACGAATGAGATT | + |
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Preference number: 5 (lower is better) Translates to: RLATYKSKNSTKRGR*CPGLVVSPNKTNEI Trigger: AATCTCATTCGTTTTATTGGGACTGACAACAAGTCCTGGACAGCAGCGGCCTCTCTTTGTGCTGTTCTTGCTCTTGTATGTGGCCAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277309.3 |
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| CDS GCA 72 bp | GACGTGGGACACCAGCCATGCCATTCCCACCAGGGCTaGGCACATGGCCCGGGACATCCTCGTGGCATAGGG | + |
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Preference number: 6 (lower is better) Translates to: DVGHQPCHSHQG*AHGPGHPRGIG Trigger: CCCTATGCCACGAGGATGTCCCGGGCCATGTGCGCAGCCCTGGTGGGAATGGCATGGCTGGTGTCCCACGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277309.3 |
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| CDS CCA 72 bp | ACACCAGCCATGCCATTCCCACCAGGGCTGCGCACATaGCCCGGGACATCCTCGTGGCATAGGGGAGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: TPAMPFPPGLRT*PGTSSWHRGGG Trigger: ACCCCCTCCCCTATGCCACGAGGATGTCCCGGGCCATGTGCGCAGCCCTGGTGGGAATGGCATGGCTGGTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000277309.3 |
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| CDS GCA 72 bp | GGAGGCGAGGATGAGCAGGAAGGGAGTGACCACCACTaGGGCGCCCTCGGTGAAGATGAGCAGCTGGATGTG | + |
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Preference number: 6 (lower is better) Translates to: GGEDEQEGSDHH*GALGEDEQLDV Trigger: CACATCCAGCTGCTCATCTTCACCGAGGGCGCCGCAGTGGTGGTCACTCCCTTCCTGCTCATCCTCGCCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277309.3 |
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| CDS CCA 72 bp | ACTGCGGCGCCCTCGGTGAAGATGAGCAGCTGGATGTaGTGGGTGTCAGAGCACGAGAGCCTTAAGAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: TAAPSVKMSSWM*WVSEHESLKRG Trigger: GCCTCTCTTAAGGCTCTCGTGCTCTGACACCCACCACATCCAGCTGCTCATCTTCACCGAGGGCGCCGCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277309.3 |
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| CDS CCA 72 bp | ACCACCACTGCGGCGCCCTCGGTGAAGATGAGCAGCTaGATGTGGTGGGTGTCAGAGCACGAGAGCCTTAAG | + |
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Preference number: 6 (lower is better) Translates to: TTTAAPSVKMSS*MWWVSEHESLK Trigger: CTTAAGGCTCTCGTGCTCTGACACCCACCACATCCAGCTGCTCATCTTCACCGAGGGCGCCGCAGTGGTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277309.3 |
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| CDS TCA 72 bp | CATGAAGGGCTGGACTGGCCTGGATGGCAGCCACAATaGGTCCATTACCCAGGAGGCTGGCCACATACAAGA | + |
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Preference number: 6 (lower is better) Translates to: HEGLDWPGWQPQ*VHYPGGWPHTR Trigger: TCTTGTATGTGGCCAGCCTCCTGGGTAATGGACTCATTGTGGCTGCCATCCAGGCCAGTCCAGCCCTTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277309.3 |
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| CDS CCA 72 bp | TACATTTGGGTCAGGCAGCCAGCCAGCGAGATGGAGTaGTCATGGGCCAACAAGTTGGCCAACATCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: YIWVRQPASEME*SWANKLANILG Trigger: GCCCAAGATGTTGGCCAACTTGTTGGCCCATGACCACTCCATCTCGCTGGCTGGCTGCCTGACCCAAATGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277309.3 |
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| CDS CCA 72 bp | AGAAGTACATTTGGGTCAGGCAGCCAGCCAGCGAGATaGAGTGGTCATGGGCCAACAAGTTGGCCAACATCT | + |
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Preference number: 6 (lower is better) Translates to: RSTFGSGSQPAR*SGHGPTSWPTS Trigger: AGATGTTGGCCAACTTGTTGGCCCATGACCACTCCATCTCGCTGGCTGGCTGCCTGACCCAAATGTACTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277309.3 |
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| CDS CAA 72 bp | ACAGCACAAAGAGAGGCCGCTGCTGTCCAGGACTTGTaGTCAGTCCCAATAAAACGAATGAGATTCCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: TAQREAAAVQDL*SVPIKRMRFPL Trigger: CAGAGGGAATCTCATTCGTTTTATTGGGACTGACAACAAGTCCTGGACAGCAGCGGCCTCTCTTTGTGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277309.3 |
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| CDS GCA 72 bp | ACATACAAGAGCAAGAACAGCACAAAGAGAGGCCGCTaGTGTCCAGGACTTGTTGTCAGTCCCAATAAAACG | + |
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Preference number: 6 (lower is better) Translates to: TYKSKNSTKRGR*CPGLVVSPNKT Trigger: CGTTTTATTGGGACTGACAACAAGTCCTGGACAGCAGCGGCCTCTCTTTGTGCTGTTCTTGCTCTTGTATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277309.3 |
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| CDS CAA 72 bp | AGAACAGCACAAAGAGAGGCCGCTGCTGTCCAGGACTaGTTGTCAGTCCCAATAAAACGAATGAGATTCCCT | + |
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Preference number: 6 (lower is better) Translates to: RTAQREAAAVQD*LSVPIKRMRFP Trigger: AGGGAATCTCATTCGTTTTATTGGGACTGACAACAAGTCCTGGACAGCAGCGGCCTCTCTTTGTGCTGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277309.3 |
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| CDS CAA 90 bp | AGAGCAAGAACAGCACAAAGAGAGGCCGCTGCTGTCCAGGACTTGTaGTCAGTCCCAATAAAACGAATGAGATTCCCTCTGAAGACTCAT | + |
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Preference number: 6 (lower is better) Translates to: RARTAQREAAAVQDL*SVPIKRMRFPLKTH Trigger: ATGAGTCTTCAGAGGGAATCTCATTCGTTTTATTGGGACTGACAACAAGTCCTGGACAGCAGCGGCCTCTCTTTGTGCTGTTCTTGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277309.3 |
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| CDS CAA 90 bp | ACAAGAGCAAGAACAGCACAAAGAGAGGCCGCTGCTGTCCAGGACTaGTTGTCAGTCCCAATAAAACGAATGAGATTCCCTCTGAAGACT | + |
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Preference number: 6 (lower is better) Translates to: TRARTAQREAAAVQD*LSVPIKRMRFPLKT Trigger: AGTCTTCAGAGGGAATCTCATTCGTTTTATTGGGACTGACAACAAGTCCTGGACAGCAGCGGCCTCTCTTTGTGCTGTTCTTGCTCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277309.3 |
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