Pregenerated sensors for OR1E3 (Homo sapiens)
Ensembl gene IDs: ENSG00000142163Ensembl transcript IDs: ENST00000575608.2
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS CCA 90 bp | GCACAAAAGGACAGCCTGGCCATAAGCAAGGTGTGCAACGTGGCATaGGCAGTGGTCAACAGCCAGGAGAGTGTCAGCAGACCAAGGCAA | + |
Preference number: 5 (lower is better) Translates to: AQKDSLAISKVCNVA*AVVNSQESVSRPRQ Trigger: TTGCCTTGGTCTGCTGACACTCTCCTGGCTGTTGACCACTGCCCATGCCACGTTGCACACCTTGCTTATGGCCAGGCTGTCCTTTTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575608.2 |
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CDS GCA 90 bp | ATCACATTCTCAGCACAAAAGGACAGCCTGGCCATAAGCAAGGTGTaGAACGTGGCATGGGCAGTGGTCAACAGCCAGGAGAGTGTCAGC | + |
Preference number: 5 (lower is better) Translates to: ITFSAQKDSLAISKV*NVAWAVVNSQESVS Trigger: GCTGACACTCTCCTGGCTGTTGACCACTGCCCATGCCACGTTGCACACCTTGCTTATGGCCAGGCTGTCCTTTTGTGCTGAGAATGTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575608.2 |
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CDS GCA 72 bp | TCAGCACAAAAGGACAGCCTGGCCATAAGCAAGGTGTaGAACGTGGCATGGGCAGTGGTCAACAGCCAGGAG | + |
Preference number: 6 (lower is better) Translates to: SAQKDSLAISKV*NVAWAVVNSQE Trigger: CTCCTGGCTGTTGACCACTGCCCATGCCACGTTGCACACCTTGCTTATGGCCAGGCTGTCCTTTTGTGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575608.2 |