RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR1D2 (Homo sapiens)

Ensembl gene IDs: ENSG00000184166

Ensembl transcript IDs: ENST00000641064.1, ENST00000641833.1

Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCTGGCCAGTTGGCAGGGTCTATGGGCAGGCAGGCCTAGTGCTTaGGGATGTGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGG +
Preference number: 1 (lower is better)
Translates to: GLASWQGLWAGRPSA*GCGWMGQLLGTMHR
Trigger: CCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACATCCCCAAGCACTAGGCCTGCCTGCCCATAGACCCTGCCAACTGGCCAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CCA 90 bp TGGCAGGGTCTATGGGCAGGCAGGCCTAGTGCTTGGGGATGTGGGTaGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGG +
Preference number: 1 (lower is better)
Translates to: WQGLWAGRPSAWGCG*MGQLLGTMHRPTVG
Trigger: CCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACATCCCCAAGCACTAGGCCTGCCTGCCCATAGACCCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CCA 90 bp GTCAGCTTAGCCAGATATTCTGGGCTGGCCAGTTGGCAGGGTCTATaGGCAGGCAGGCCTAGTGCTTGGGGATGTGGGTGGATGGGCCAG +
Preference number: 1 (lower is better)
Translates to: VSLARYSGLASWQGL*AGRPSAWGCGWMGQ
Trigger: CTGGCCCATCCACCCACATCCCCAAGCACTAGGCCTGCCTGCCCATAGACCCTGCCAACTGGCCAGCCCAGAATATCTGGCTAAGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CCA 90 bp GGGATTATGGCTGCCTCTGCTGTGTCATACAGGTTGCCAGGGAAGTaGTGGAAAGCCAGCAGTGATAGGCCTCACCCAGCTCCCATGCTG +
Preference number: 1 (lower is better)
Translates to: GIMAASAVSYRLPGK*WKASSDRPHPAPML
Trigger: CAGCATGGGAGCTGGGTGAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAGCAGAGGCAGCCATAATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CCA 90 bp AAAGCCAGCAGTGATAGGCCTCACCCAGCTCCCATGCTGTCCAAGTaGCCATGTCACTCCCAATGTGCCCTACCCCTAACAGTGCTGAGT +
Preference number: 1 (lower is better)
Translates to: KASSDRPHPAPMLSK*PCHSQCALPLTVLS
Trigger: ACTCAGCACTGTTAGGGGTAGGGCACATTGGGAGTGACATGGCCACTTGGACAGCATGGGAGCTGGGTGAGGCCTATCACTGCTGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CCA 90 bp ATTATGGCTGCCTCTGCTGTGTCATACAGGTTGCCAGGGAAGTGGTaGAAAGCCAGCAGTGATAGGCCTCACCCAGCTCCCATGCTGTCC +
Preference number: 1 (lower is better)
Translates to: IMAASAVSYRLPGKW*KASSDRPHPAPMLS
Trigger: GGACAGCATGGGAGCTGGGTGAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAGCAGAGGCAGCCATAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR GCA 90 bp AGTTTCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATaGCCTTTGTCTTCGGCTACCAGGGTGCGTAGAGAAAGACCATTA +
Preference number: 1 (lower is better)
Translates to: SFSGGEWDHRAPKRL*PLSSATRVRRERPL
Trigger: TAATGGTCTTTCTCTACGCACCCTGGTAGCCGAAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR TCA 90 bp CCCAATCACTGCTGTATAACACACAGGACAATCCCTTACATAGGGTaGAGGATATTCCTAGTCTCCACTTTAATGCTGTCTTTCCAAATT +
Preference number: 1 (lower is better)
Translates to: PNHCCITHRTIPYIG*RIFLVSTLMLSFQI
Trigger: AATTTGGAAAGACAGCATTAAAGTGGAGACTAGGAATATCCTTCACCCTATGTAAGGGATTGTCCTGTGTGTTATACAGCAGTGATTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CCA 90 bp GGTGTTAAAGAACCTTGTTTTGTCATATTACCAGATTTGTTTTTCTaGTTCCTTCTCATTTGGGTAGACTATGTCAGAAGGAAGATCTGG +
Preference number: 1 (lower is better)
Translates to: GVKEPCFVILPDLFF*FLLIWVDYVRRKIW
Trigger: CCAGATCTTCCTTCTGACATAGTCTACCCAAATGAGAAGGAACCAGAAAAACAAATCTGGTAATATGACAAAACAAGGTTCTTTAACACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR TCA 90 bp AGTAGTTTACCTGTGTTTTTGTGTGGGTCACCATGTTTCTTCAAATaGTCACTTGAATTCTTTGTCAGGCAGTTCATATTTCTCCATTTC +
Preference number: 1 (lower is better)
Translates to: SSLPVFLCGSPCFFK*SLEFFVRQFIFLHF
Trigger: GAAATGGAGAAATATGAACTGCCTGACAAAGAATTCAAGTGATCATTTGAAGAAACATGGTGACCCACACAAAAACACAGGTAAACTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp ATAGGCCTCACCCAGCTCCCATGCTGTCCAAGTGGCCATGTCACTCCCAATGTGGGATGGGCCAGCTTCTaGGCACCATGCACAGGCCCA +
Preference number: 2 (lower is better)
Translates to: IGLTQLPCCPSGHVTPNVGWASF*APCTGP
Trigger: TGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCC...CACATTGGGAGTGACATGGCCACTTGGACAGCATGGGAGCTGGGTGAGGCCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR GCA 90 bp TGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCAAGGGGATCTCTCTTTGTaGTACTCTGTGCTGGCTTGG +
Preference number: 2 (lower is better)
Translates to: WVDGPASGHHAQAHCRVQGDLSL*YSVLAW
Trigger: CCAAGCCAGCACAGAGTAGCACAAAGAGAGATCCCC...TTGCACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp CTGTGTCATACAGGTTGCCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGCCTCGGGGATGTGGGTGGATaGGCCAGCTTCTGGGCACCA +
Preference number: 2 (lower is better)
Translates to: LCHTGCQGSGGKPAVIGLGDVGG*ASFWAP
Trigger: TGGTGCCCAGAAGCTGGCCCATCCACCCACATCCCC...GAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp ATGTGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGATTCTTGGTGAGGCATaGCAGAAGTGGTCCTCTTGG +
Preference number: 2 (lower is better)
Translates to: MWVDGPASGHHAQAHCRVILGEA*QKWSSW
Trigger: CCAAGAGGACCACTTCTGTCATGCCTCACCAAGAAT...CACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp TGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCAAATTCCACCATCTTGTTaGCATCACTCCTTTCACCCG +
Preference number: 2 (lower is better)
Translates to: WVDGPASGHHAQAHCRVQIPPSC*HHSFHP
Trigger: CGGGTGAAAGGAGTGATGTCAACAAGATGGTGGAAT...TTGCACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGAGGGGATGTGGGTGGATaGGCCAGCTTCTGGGCACCA +
Preference number: 2 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRGDVGG*ASFWAP
Trigger: TGGTGCCCAGAAGCTGGCCCATCCACCCACATCCCC...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGAGCTTGGGGATGTGGGTaGATGGGCCAGCTTCTGGGC +
Preference number: 2 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRAWGCG*MGQLLG
Trigger: GCCCAGAAGCTGGCCCATCCACCCACATCCCCAAGC...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp ATGTGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGATTTGTAACCCAGTTTaGGGCCTCTGTACACTGTCA +
Preference number: 2 (lower is better)
Translates to: MWVDGPASGHHAQAHCRVICNPV*GLCTLS
Trigger: TGACAGTGTACAGAGGCCTCAAACTGGGTTACAAAT...CACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp ATAGGCCTCACCCAGCTCCCATGCTGTCCAAGTGGCCATGTCACTCCCAATGTGTACTCTGTGCTGGCTTaGGTGAGGGGTGATTCAGGT +
Preference number: 2 (lower is better)
Translates to: IGLTQLPCCPSGHVTPNVYSVLA*VRGDSG
Trigger: ACCTGAATCACCCCTCACCCAAGCCAGCACAGAGTA...CACATTGGGAGTGACATGGCCACTTGGACAGCATGGGAGCTGGGTGAGGCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGACAGGGGGTACGTGACTaGGGGCTGCATGCACCAGTA +
Preference number: 2 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRQGVRD*GLHAPV
Trigger: TACTGGTGCATGCAGCCCCCAGTCACGTACCCCCTG...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CAA 90 bp TATGTTCCCATGGGGATTATGGCTGCCTCTGCTGTGTCATACAGGTaGCCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGCCTCACCCA +
Preference number: 2 (lower is better)
Translates to: YVPMGIMAASAVSYR*PGKWWKASSDRPHP
Trigger: TGGGTGAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAGCAGAGGCAGCCATAATCCCCATGGGAACATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp TGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCAATGGATGTGTGCTAGATaGGAGACACTTCTAGGTTTA +
Preference number: 2 (lower is better)
Translates to: WVDGPASGHHAQAHCRVQWMCAR*ETLLGL
Trigger: TAAACCTAGAAGTGTCTCTCATCTAGCACACATCCA...TTGCACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp ATAGGCCTCACCCAGCTCCCATGCTGTCCAAGTGGCCATGTCACTCCCAATGTGATTCTTGGTGAGGCATaGCAGAAGTGGTCCTCTTGG +
Preference number: 2 (lower is better)
Translates to: IGLTQLPCCPSGHVTPNVILGEA*QKWSSW
Trigger: CCAAGAGGACCACTTCTGTCATGCCTCACCAAGAAT...CACATTGGGAGTGACATGGCCACTTGGACAGCATGGGAGCTGGGTGAGGCCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGAGCTGGTGAGCAGGGCTaGAAACTTGTTCCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRAGEQG*KLVPGC
Trigger: GCAGCCTGGAACAAGTTTTCAGCCCTGCTCACCAGC...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp CTGTGTCATACAGGTTGCCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGCCTCTACTCTGTGCTGGCTTaGGTGAGGGGTGATTCAGGT +
Preference number: 2 (lower is better)
Translates to: LCHTGCQGSGGKPAVIGLYSVLA*VRGDSG
Trigger: ACCTGAATCACCCCTCACCCAAGCCAGCACAGAGTA...GAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTGCTGGTGAGCAGGGCTaGAAACTTGTTCCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: SQVVSGTIELPRDYALCLAGEQG*KLVPGC
Trigger: GCAGCCTGGAACAAGTTTTCAGCCCTGCTCACCAGC...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATGGATGGGCCAGCTTCTaGGCACCATGCACAGGCCCA +
Preference number: 2 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDGWASF*APCTGP
Trigger: TGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCC...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGGCTTGGGGATGTGGGTaGATGGGCCAGCTTCTGGGC +
Preference number: 2 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKAWGCG*MGQLLG
Trigger: GCCCAGAAGCTGGCCCATCCACCCACATCCCCAAGC...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATGGCAGGCCTAGTGCTTaGGGATGTGGGTGGATGGGC +
Preference number: 2 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDGRPSA*GCGWMG
Trigger: GCCCATCCACCCACATCCCCAAGCACTAGGCCTGCC...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGGGCAGGCCTAGTGCTTaGGGATGTGGGTGGATGGGC +
Preference number: 2 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKGRPSA*GCGWMG
Trigger: GCCCATCCACCCACATCCCCAAGCACTAGGCCTGCC...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGTCTGGGCTGGCCAGTTaGCAGGGTCTATGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKSGLAS*QGLWAG
Trigger: GCCTGCCCATAGACCCTGCCAACTGGCCAGCCCAGA...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGATCAGTCCCTCAGGCATaGATACCAGTGCCTGGTCCA +
Preference number: 2 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRSVPQA*IPVPGP
Trigger: TGGACCAGGCACTGGTATCCATGCCTGAGGGACTGA...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR GCA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGTCCTTCGGTGGGGCTTaGTGTGGCCACTGTGAGGGA +
Preference number: 2 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKSFGGA*CGHCEG
Trigger: TCCCTCACAGTGGCCACAGCAAGCCCCACCGAAGGA...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR GCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATTCCTTCGGTGGGGCTTaGTGTGGCCACTGTGAGGGA +
Preference number: 2 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDSFGGA*CGHCEG
Trigger: TCCCTCACAGTGGCCACAGCAAGCCCCACCGAAGGA...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTAGTTGGCAGGGTCTATaGGCAGGCAGGCCTAGTGCT +
Preference number: 2 (lower is better)
Translates to: VSLLRKQAALSGFCFPACSWQGL*AGRPSA
Trigger: AGCACTAGGCCTGCCTGCCCATAGACCCTGCCAACT...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGAAGGTTGCCAGGGAAGTaGTGGAAAGCCAGCAGTGAT +
Preference number: 2 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRRLPGK*WKASSD
Trigger: ATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCT...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGAATGGATACCAGTGCCTaGTCCAGTGGAGGTAGCAGT +
Preference number: 2 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRMDTSA*SSGGSS
Trigger: ACTGCTACCTCCACTGGACCAGGCACTGGTATCCAT...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp CTGTGTCATACAGGTTGCCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGCCTCATCCCTTACATAGGGTaGAGGATATTCCTAGTCTCC +
Preference number: 2 (lower is better)
Translates to: LCHTGCQGSGGKPAVIGLIPYIG*RIFLVS
Trigger: GGAGACTAGGAATATCCTTCACCCTATGTAAGGGAT...GAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGATCTATATGCTGTCTCTaGGCTGGAGCCATGTCCCAA +
Preference number: 2 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRSICCL*AGAMSQ
Trigger: TTGGGACATGGCTCCAGCTCAGAGACAGCATATAGA...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp GGGCTGAAAACTTGTTCCAGGCTGCAAGTCTCCCTGTTGAGAAAGCAAGCAGCATCTATATGCTGTCTCTaGGCTGGAGCCATGTCCCAA +
Preference number: 2 (lower is better)
Translates to: GLKTCSRLQVSLLRKQAASICCL*AGAMSQ
Trigger: TTGGGACATGGCTCCAGCTCAGAGACAGCATATAGA...TGCTGCTTGCTTTCTCAACAGGGAGACTTGCAGCCTGGAACAAGTTTTCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp CTGTGTCATACAGGTTGCCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGCCTCACCTCCACAGCCATGTaGCTAACTTTCTTATCAGCT +
Preference number: 2 (lower is better)
Translates to: LCHTGCQGSGGKPAVIGLTSTAM*LTFLSA
Trigger: AGCTGATAAGAAAGTTAGTCACATGGCTGTGGAGGT...GAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGATCCCCGAGTAGACTGTaGCCTCACATTTGTAACCCA +
Preference number: 2 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRSPSRL*PHICNP
Trigger: TGGGTTACAAATGTGAGGTCACAGTCTACTCGGGGA...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGTTGCTGTGGCCACTGTaGGGGATGGGGGTGTGGTTA +
Preference number: 2 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKLLWPL*GMGVWL
Trigger: TAACCACACCCCCATCCCTCACAGTGGCCACAGCAA...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp ATAGGCCTCACCCAGCTCCCATGCTGTCCAAGTGGCCATGTCACTCCCAATGTGATAAGGCCAAGAATGTaGCCCTGTAGTCAAGTACAT +
Preference number: 2 (lower is better)
Translates to: IGLTQLPCCPSGHVTPNVIRPRM*PCSQVH
Trigger: ATGTACTTGACTACAGGGCCACATTCTTGGCCTTAT...CACATTGGGAGTGACATGGCCACTTGGACAGCATGGGAGCTGGGTGAGGCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATCCCATCTCCTGGGGATaGGGCTTCCTGAGAGCCAAA +
Preference number: 2 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDPISWG*GFLRAK
Trigger: TTTGGCTCTCAGGAAGCCCCATCCCCAGGAGATGGG...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATGGGGATGGGGCTTCCTaGGAGCCAAACTGCAATGAT +
Preference number: 2 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDGDGAS*EPNCND
Trigger: ATCATTGCAGTTTGGCTCTCAGGAAGCCCCATCCCC...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGAGAATGTCAAATGAATTaGACACCACCTGTCGAGGTC +
Preference number: 2 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRECQMN*TPPVEV
Trigger: GACCTCGACAGGTGGTGTTCAATTCATTTGACATTC...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR GCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATGGGGATCTCTCTTTGTaGTACTCTGTGCTGGCTTGG +
Preference number: 2 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDGDLSL*YSVLAW
Trigger: CCAAGCCAGCACAGAGTAGCACAAAGAGAGATCCCC...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTATGCTGTCTCTGAGCTaGAGCCATGTCCCAATCACT +
Preference number: 2 (lower is better)
Translates to: VSLLRKQAALSGFCFPACMLSLS*SHVPIT
Trigger: AGTGATTGGGACATGGCTCCAGCTCAGAGACAGCAT...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp CTGTGTCATACAGGTTGCCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGCCTCCTTTCACTTGGATTCTaGAGCTCTCACAAAGGTATT +
Preference number: 2 (lower is better)
Translates to: LCHTGCQGSGGKPAVIGLLSLGF*SSHKGI
Trigger: AATACCTTTGTGAGAGCTCCAGAATCCAAGTGAAAG...GAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGTTCTCAGGTGGTGAGTaGGACCATAGAGCTCCCAAG +
Preference number: 2 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKFSGGE*DHRAPK
Trigger: CTTGGGAGCTCTATGGTCCCACTCACCACCTGAGAA...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATATCCAACAGAGCTTCTaGGCTCTGAGCTGGTACTGG +
Preference number: 2 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDIQQSF*ALSWYW
Trigger: CCAGTACCAGCTCAGAGCCCAGAAGCTCTGTTGGAT...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTGAATGTCAAATGAATTaGACACCACCTGTCGAGGTC +
Preference number: 2 (lower is better)
Translates to: SQVVSGTIELPRDYALCLECQMN*TPPVEV
Trigger: GACCTCGACAGGTGGTGTTCAATTCATTTGACATTC...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTATTTGTAACCCAGTTTaGGGCCTCTGTACACTGTCA +
Preference number: 2 (lower is better)
Translates to: SQVVSGTIELPRDYALCLICNPV*GLCTLS
Trigger: TGACAGTGTACAGAGGCCTCAAACTGGGTTACAAAT...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGACTGTATGTTGGTGGATaGGAGATACAACTGTCGATT +
Preference number: 2 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRLYVGG*EIQLSI
Trigger: AATCGACAGTTGTATCTCTCATCCACCAACATACAG...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTGAAGAACTCATGAGATaGGGGGATCTCTCTTTGTGC +
Preference number: 2 (lower is better)
Translates to: VSLLRKQAALSGFCFPACEELMR*GDLSLC
Trigger: GCACAAAGAGAGATCCCCTCATCTCATGAGTTCTTC...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp CTGTGTCATACAGGTTGCCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGCCTCTTGTGTTTGCACATTTaGAGAAGCAGTCATCTCTTT +
Preference number: 2 (lower is better)
Translates to: LCHTGCQGSGGKPAVIGLLCLHI*RSSHLF
Trigger: AAAGAGATGACTGCTTCTTCAAATGTGCAAACACAA...GAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp CTGTGTCATACAGGTTGCCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGCCTCTTTGCTAAGTTTCCTTaGTTCCTTGTGTTTCCTGTA +
Preference number: 2 (lower is better)
Translates to: LCHTGCQGSGGKPAVIGLFAKFP*FLVFPV
Trigger: TACAGGAAACACAAGGAATCAAGGAAACTTAGCAAA...GAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR GCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATCTGTGTCATACAGGTTaGCAGGGAAGTGGTGGAAAG +
Preference number: 2 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDLCHTG*QGSGGK
Trigger: CTTTCCACCACTTCCCTGGCAACCTGTATGACACAG...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR GCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATGCTCCCAAGAGATTATaGCCTTTGTCTTCGGCTACC +
Preference number: 2 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDAPKRL*PLSSAT
Trigger: GGTAGCCGAAGACAAAGGGCATAATCTCTTGGGAGC...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATATGCTGTCTCTGAGCTaGAGCCATGTCCCAATCACT +
Preference number: 2 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDMLSLS*SHVPIT
Trigger: AGTGATTGGGACATGGCTCCAGCTCAGAGACAGCAT...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATGAAAGACCATTAGGTTaGGGCAGGGTTAGGCATGTG +
Preference number: 2 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDERPLG*GRVRHV
Trigger: CACATGCCTAACCCTGCCCCAACCTAATGGTCTTTC...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATGAAGAACTCATGAGATaGGGGGATCTCTCTTTGTGC +
Preference number: 2 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDEELMR*GDLSLC
Trigger: GCACAAAGAGAGATCCCCTCATCTCATGAGTTCTTC...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTTCTTGGTTAGCATCCTaGAAGTCAGGGGAAGTTGTA +
Preference number: 2 (lower is better)
Translates to: VSLLRKQAALSGFCFPACSWLAS*KSGEVV
Trigger: TACAACTTCCCCTGACTTTCAGGATGCTAACCAAGA...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTCTGTGGTGGCTGCTGTaGATAGCCATTTTTAGAAAA +
Preference number: 2 (lower is better)
Translates to: SQVVSGTIELPRDYALCLLWWLL*IAIFRK
Trigger: TTTTCTAAAAATGGCTATTCACAGCAGCCACCACAG...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATAAGAGTCCTGTGATGTaGTCTGTCTTCAGTCCCTCA +
Preference number: 2 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDKSPVM*SVFSPS
Trigger: TGAGGGACTGAAGACAGATCACATCACAGGACTCTT...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGAGGAGTCTATGGTCCTTaGTTGAAGTTTTGTTTAGTG +
Preference number: 2 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRGVYGP*LKFCLV
Trigger: CACTAAACAAAACTTCAACCAAGGACCATAGACTCC...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CAA 90 bp TGGTCCAAGTGTTTATCTAGGAGTCTATGGTCCTTGGTTGAAGTTTaGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTC +
Preference number: 2 (lower is better)
Translates to: WSKCLSRSLWSLVEV*FSVLVGLQPRGGPF
Trigger: GAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTCAACCAAGGACCATAGACTCCTAGATAAACACTTGGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATATCCCTTACATAGGGTaGAGGATATTCCTAGTCTCC +
Preference number: 2 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDIPYIG*RIFLVS
Trigger: GGAGACTAGGAATATCCTTCACCCTATGTAAGGGAT...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGACCTCCACAGCCATGTaGCTAACTTTCTTATCAGCT +
Preference number: 2 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKTSTAM*LTFLSA
Trigger: AGCTGATAAGAAAGTTAGTCACATGGCTGTGGAGGT...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp AATGAAGTTATGTTCCCATGGGGATTATGGCTGCCTCTGCTGTGTCATACAGGTTCTTGGTTAGCATCCTaGAAGTCAGGGGAAGTTGTA +
Preference number: 2 (lower is better)
Translates to: NEVMFPWGLWLPLLCHTGSWLAS*KSGEVV
Trigger: TACAACTTCCCCTGACTTTCAGGATGCTAACCAAGA...ACCTGTATGACACAGCAGAGGCAGCCATAATCCCCATGGGAACATAACTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGATTGTGTTTGCACATTTaGAGAAGCAGTCATCTCTTT +
Preference number: 2 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRLCLHI*RSSHLF
Trigger: AAAGAGATGACTGCTTCTTCAAATGTGCAAACACAA...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR GCA 90 bp AATGAAGTTATGTTCCCATGGGGATTATGGCTGCCTCTGCTGTGTCATACAGGTCCATGTCCCAATCACTaGTGTATAACACACAGGACA +
Preference number: 2 (lower is better)
Translates to: NEVMFPWGLWLPLLCHTGPCPNH*CITHRT
Trigger: TGTCCTGTGTGTTATACAGCAGTGATTGGGACATGG...ACCTGTATGACACAGCAGAGGCAGCCATAATCCCCATGGGAACATAACTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATTGCCCTAAGGTGGCCTaGATAAGTATTCCAGTTTCT +
Preference number: 2 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDCPKVA*ISIPVS
Trigger: AGAAACTGGAATACTTATCCAGGCCACCTTAGGGCA...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGCTGTATGTTGGTGGATaGGAGATACAACTGTCGATT +
Preference number: 2 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKLYVGG*EIQLSI
Trigger: AATCGACAGTTGTATCTCTCATCCACCAACATACAG...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR GCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGACAGGGATTTTTACAATaGTTTTCCATACAATGTCTG +
Preference number: 2 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRQGFLQ*FSIQCL
Trigger: CAGACATTGTATGGAAAAGCATTGTAAAAATCCCTG...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CAA 90 bp AGTGAACTCTCATGGTCCAAGTGTTTATCTAGGAGTCTATGGTCCTaGGTTGAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGA +
Preference number: 2 (lower is better)
Translates to: SELSWSKCLSRSLWS*VEVLFSVLVGLQPR
Trigger: TCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTCAACCAAGGACCATAGACTCCTAGATAAACACTTGGACCATGAGAGTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp AATGAAGTTATGTTCCCATGGGGATTATGGCTGCCTCTGCTGTGTCATACAGGTACCTGTGTTTTTGTGTaGGTCACCATGTTTCTTCAA +
Preference number: 2 (lower is better)
Translates to: NEVMFPWGLWLPLLCHTGTCVFV*VTMFLQ
Trigger: TTGAAGAAACATGGTGACCCACACAAAAACACAGGT...ACCTGTATGACACAGCAGAGGCAGCCATAATCCCCATGGGAACATAACTTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp TGTAGCTTCACATTTGTGTTTGCACATTTGAAGAAGCAGTCATCTCTTTTAGTCTCCCCGAGTAGACTGTaGCCTCACATTTGTAACCCA +
Preference number: 2 (lower is better)
Translates to: CSFTFVFAHLKKQSSLLVSPSRL*PHICNP
Trigger: TGGGTTACAAATGTGAGGTCACAGTCTACTCGGGGA...GACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR GCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATCTTCACATTTGTGTTTaGACATTTGAAGAAGCAGTC +
Preference number: 2 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDLHICV*TFEEAV
Trigger: GACTGCTTCTTCAAATGTGCAAACACAAATGTGAAG...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR TCA 90 bp TGTAGCTTCACATTTGTGTTTGCACATTTGAAGAAGCAGTCATCTCTTTTAGTCATTCCACCATCTTGTTaGCATCACTCCTTTCACCCG +
Preference number: 2 (lower is better)
Translates to: CSFTFVFAHLKKQSSLLVIPPSC*HHSFHP
Trigger: CGGGTGAAAGGAGTGATGTCAACAAGATGGTGGAAT...GACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CAA 90 bp GTATGTTGGTGGATGAGAGATACAACTGTCGATTCCACCATCTTGTaGACATCACTCCTTTCACCCGTTTTGAAATATCTTTTACCTGAT +
Preference number: 2 (lower is better)
Translates to: VCWWMRDTTVDSTIL*TSLLSPVLKYLLPD
Trigger: ATCAGGTAAAAGATATTTCAAAACGGGTGAAAGGAGTGATGTCAACAAGATGGTGGAATCGACAGTTGTATCTCTCATCCACCAACATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CAA 90 bp TCTGTATGTTGGTGGATGAGAGATACAACTGTCGATTCCACCATCTaGTTGACATCACTCCTTTCACCCGTTTTGAAATATCTTTTACCT +
Preference number: 2 (lower is better)
Translates to: SVCWWMRDTTVDSTI*LTSLLSPVLKYLLP
Trigger: AGGTAAAAGATATTTCAAAACGGGTGAAAGGAGTGATGTCAACAAGATGGTGGAATCGACAGTTGTATCTCTCATCCACCAACATACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR GCA 90 bp TGTAGCTTCACATTTGTGTTTGCACATTTGAAGAAGCAGTCATCTCTTTTAGTCCCATGTCCCAATCACTaGTGTATAACACACAGGACA +
Preference number: 2 (lower is better)
Translates to: CSFTFVFAHLKKQSSLLVPCPNH*CITHRT
Trigger: TGTCCTGTGTGTTATACAGCAGTGATTGGGACATGG...GACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CAA 90 bp ACATTTGAAGAAGCAGTCATCTCTTTTAGTCTTTACAGGCTGGTTTaGATAGGGAAAGTCCAATTTGATAGGAACTGTTTTTCACCAGTC +
Preference number: 2 (lower is better)
Translates to: TFEEAVISFSLYRLV*IGKVQFDRNCFSPV
Trigger: GACTGGTGAAAAACAGTTCCTATCAAATTGGACTTTCCCTATCAAAACCAGCCTGTAAAGACTAAAAGAGATGACTGCTTCTTCAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CCA 90 bp TGTAGCTTCACATTTGTGTTTGCACATTTGAAGAAGCAGTCATCTCTTTTAGTCCTTTCACTTGGATTCTaGAGCTCTCACAAAGGTATT +
Preference number: 2 (lower is better)
Translates to: CSFTFVFAHLKKQSSLLVLSLGF*SSHKGI
Trigger: AATACCTTTGTGAGAGCTCCAGAATCCAAGTGAAAG...GACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CAA 90 bp TACCTGTGTTTTTGTGTGGGTCACCATGTTTCTTCAAATGATCACTaGAATTCTTTGTCAGGCAGTTCATATTTCTCCATTTCTTTGATG +
Preference number: 2 (lower is better)
Translates to: YLCFCVGHHVSSNDH*NSLSGSSYFSISLM
Trigger: CATCAAAGAAATGGAGAAATATGAACTGCCTGACAAAGAATTCAAGTGATCATTTGAAGAAACATGGTGACCCACACAAAAACACAGGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CCA 72 bp GGGCAGGCAGGCCTAGTGCTTGGGGATGTGGGTGGATaGGCCAGCTTCTGGGCACCATGCACAGGCCCACTG +
Preference number: 3 (lower is better)
Translates to: GQAGLVLGDVGG*ASFWAPCTGPL
Trigger: CAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACATCCCCAAGCACTAGGCCTGCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CCA 72 bp CTATGGGCAGGCAGGCCTAGTGCTTGGGGATGTGGGTaGATGGGCCAGCTTCTGGGCACCATGCACAGGCCC +
Preference number: 3 (lower is better)
Translates to: LWAGRPSAWGCG*MGQLLGTMHRP
Trigger: GGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACATCCCCAAGCACTAGGCCTGCCTGCCCATAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CCA 72 bp GCCAGATATTCTGGGCTGGCCAGTTGGCAGGGTCTATaGGCAGGCAGGCCTAGTGCTTGGGGATGTGGGTGG +
Preference number: 3 (lower is better)
Translates to: ARYSGLASWQGL*AGRPSAWGCGW
Trigger: CCACCCACATCCCCAAGCACTAGGCCTGCCTGCCCATAGACCCTGCCAACTGGCCAGCCCAGAATATCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CCA 72 bp CCAGTCAGCTTAGCCAGATATTCTGGGCTGGCCAGTTaGCAGGGTCTATGGGCAGGCAGGCCTAGTGCTTGG +
Preference number: 3 (lower is better)
Translates to: PVSLARYSGLAS*QGLWAGRPSAW
Trigger: CCAAGCACTAGGCCTGCCTGCCCATAGACCCTGCCAACTGGCCAGCCCAGAATATCTGGCTAAGCTGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CCA 72 bp GCCTCTGCTGTGTCATACAGGTTGCCAGGGAAGTGGTaGAAAGCCAGCAGTGATAGGCCTCACCCAGCTCCC +
Preference number: 3 (lower is better)
Translates to: ASAVSYRLPGKW*KASSDRPHPAP
Trigger: GGGAGCTGGGTGAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAGCAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CCA 72 bp GCTGCCTCTGCTGTGTCATACAGGTTGCCAGGGAAGTaGTGGAAAGCCAGCAGTGATAGGCCTCACCCAGCT +
Preference number: 3 (lower is better)
Translates to: AASAVSYRLPGK*WKASSDRPHPA
Trigger: AGCTGGGTGAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAGCAGAGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CCA 72 bp AGTGATAGGCCTCACCCAGCTCCCATGCTGTCCAAGTaGCCATGTCACTCCCAATGTGCCCTACCCCTAACA +
Preference number: 3 (lower is better)
Translates to: SDRPHPAPMLSK*PCHSQCALPLT
Trigger: TGTTAGGGGTAGGGCACATTGGGAGTGACATGGCCACTTGGACAGCATGGGAGCTGGGTGAGGCCTATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR GCA 72 bp TGGGGATTATGGCTGCCTCTGCTGTGTCATACAGGTTaGCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGC +
Preference number: 3 (lower is better)
Translates to: WGLWLPLLCHTG*QGSGGKPAVIG
Trigger: GCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAGCAGAGGCAGCCATAATCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR TCA 72 bp GGCAAGACTCCTGTCTCAAGAGCTGAGCTCCCCCAGTaGGCAATTCCTGTCCCTTTTAAGGGCTCACAACTC +
Preference number: 3 (lower is better)
Translates to: GKTPVSRAELPQ*AIPVPFKGSQL
Trigger: GAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTCACTGGGGGAGCTCAGCTCTTGAGACAGGAGTCTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR GCA 72 bp GGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATaGCCTTTGTCTTCGGCTACCAGGGTGCGTAGAGAA +
Preference number: 3 (lower is better)
Translates to: GGEWDHRAPKRL*PLSSATRVRRE
Trigger: TTCTCTACGCACCCTGGTAGCCGAAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CCA 72 bp GAACTGTTTTTCACCAGTCAGCTTAGCCAGATATTCTaGGCTGGCCAGTTGGCAGGGTCTATGGGCAGGCAG +
Preference number: 3 (lower is better)
Translates to: ELFFTSQLSQIF*AGQLAGSMGRQ
Trigger: CTGCCTGCCCATAGACCCTGCCAACTGGCCAGCCCAGAATATCTGGCTAAGCTGACTGGTGAAAAACAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CAA 90 bp ATAGGCCTCACCCAGCTCCCATGCTGTCCAAGTGGCCATGTCACTCCCAATGTGAGTTTACCTGTGTTTTaGTGTGGGTCACCATGTTTC +
Preference number: 3 (lower is better)
Translates to: IGLTQLPCCPSGHVTPNVSLPVF*CGSPCF
Trigger: GAAACATGGTGACCCACACAAAAACACAGGTAAACT...CACATTGGGAGTGACATGGCCACTTGGACAGCATGGGAGCTGGGTGAGGCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CAA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGACTGCAAGTCTCCCTGTaGAGAAAGCAAGCAGCACTT +
Preference number: 3 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRLQVSL*RKQAAL
Trigger: AAGTGCTGCTTGCTTTCTCAACAGGGAGACTTGCAG...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR TCA 72 bp GGGGTCTGGCCATGTGAATTGCCTCAGTATTCTTGGTaGGGCATGACAGAAGTGGTCCTCTTGGTTAGCATC +
Preference number: 3 (lower is better)
Translates to: GVWPCELPQYSW*GMTEVVLLVSI
Trigger: GATGCTAACCAAGAGGACCACTTCTGTCATGCCTCACCAAGAATACTGAGGCAATTCACATGGCCAGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CAA 90 bp GGGCTGAAAACTTGTTCCAGGCTGCAAGTCTCCCTGTTGAGAAAGCAAGCAGCAGATTCCACCATCTTGTaGACATCACTCCTTTCACCC +
Preference number: 3 (lower is better)
Translates to: GLKTCSRLQVSLLRKQAADSTIL*TSLLSP
Trigger: GGGTGAAAGGAGTGATGTCAACAAGATGGTGGAATC...TGCTGCTTGCTTTCTCAACAGGGAGACTTGCAGCCTGGAACAAGTTTTCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR TCA 72 bp TCCTGGGGATGGGGCTTCCTGAGAGCCAAACTGCAATaGTTGTTATTTCTCTGCTGGTCTAGCCATCCAACA +
Preference number: 3 (lower is better)
Translates to: SWGWGFLRAKLQ*LLFLCWSSHPT
Trigger: TGTTGGATGGCTAGACCAGCAGAGAAATAACAATCATTGCAGTTTGGCTCTCAGGAAGCCCCATCCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR GCA 72 bp ATGAAGTTATGTTCCCATGGGGATTATGGCTGCCTCTaGTGTGTCATACAGGTTGCCAGGGAAGTGGTGGAA +
Preference number: 3 (lower is better)
Translates to: MKLCSHGDYGCL*CVIQVAREVVE
Trigger: TTCCACCACTTCCCTGGCAACCTGTATGACACAGCAGAGGCAGCCATAATCCCCATGGGAACATAACTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CAA 90 bp CTGTGTCATACAGGTTGCCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGCCTCCTTTACAGGCTGGTTTaGATAGGGAAAGTCCAATTT +
Preference number: 3 (lower is better)
Translates to: LCHTGCQGSGGKPAVIGLLYRLV*IGKVQF
Trigger: AAATTGGACTTTCCCTATCAAAACCAGCCTGTAAAG...GAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CAA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGCTGCAAGTCTCCCTGTaGAGAAAGCAAGCAGCACTT +
Preference number: 3 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKLQVSL*RKQAAL
Trigger: AAGTGCTGCTTGCTTTCTCAACAGGGAGACTTGCAG...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CAA 90 bp AATGAAGTTATGTTCCCATGGGGATTATGGCTGCCTCTGCTGTGTCATACAGGTGATTCCACCATCTTGTaGACATCACTCCTTTCACCC +
Preference number: 3 (lower is better)
Translates to: NEVMFPWGLWLPLLCHTGDSTIL*TSLLSP
Trigger: GGGTGAAAGGAGTGATGTCAACAAGATGGTGGAATC...ACCTGTATGACACAGCAGAGGCAGCCATAATCCCCATGGGAACATAACTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CAA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTATTGCCTCAGTATTCTaGGTGAGGCATGACAGAAGT +
Preference number: 3 (lower is better)
Translates to: VSLLRKQAALSGFCFPACIASVF*VRHDRS
Trigger: ACTTCTGTCATGCCTCACCAAGAATACTGAGGCAAT...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CAA 90 bp GGGCTGAAAACTTGTTCCAGGCTGCAAGTCTCCCTGTTGAGAAAGCAAGCAGCATTTGTTCCTTTGGCTTaGCTAAGTTTCCTTGATTCC +
Preference number: 3 (lower is better)
Translates to: GLKTCSRLQVSLLRKQAAFVPLA*LSFLDS
Trigger: GGAATCAAGGAAACTTAGCAAAGCCAAAGGAACAAA...TGCTGCTTGCTTTCTCAACAGGGAGACTTGCAGCCTGGAACAAGTTTTCAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CAA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGATCCTTGGTTGAAGTTTaGTTTAGTGTACTAGTTGGC +
Preference number: 3 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRSLVEV*FSVLVG
Trigger: GCCAACTAGTACACTAAACAAAACTTCAACCAAGGA...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CAA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGAGTCTATGGTCCTTGGTaGAAGTTTTGTTTAGTGTAC +
Preference number: 3 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRVYGPW*KFCLVY
Trigger: GTACACTAAACAAAACTTCAACCAAGGACCATAGAC...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CAA 90 bp GGGCTGAAAACTTGTTCCAGGCTGCAAGTCTCCCTGTTGAGAAAGCAAGCAGCAAGTACATTGAAGAATTaGACCCTGCAACATTCTAGT +
Preference number: 3 (lower is better)
Translates to: GLKTCSRLQVSLLRKQAASTLKN*TLQHSS
Trigger: ACTAGAATGTTGCAGGGTCAAATTCTTCAATGTACT...TGCTGCTTGCTTTCTCAACAGGGAGACTTGCAGCCTGGAACAAGTTTTCAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CAA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGAAGTACATTGAAGAATTaGACCCTGCAACATTCTAGT +
Preference number: 3 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRSTLKN*TLQHSS
Trigger: ACTAGAATGTTGCAGGGTCAAATTCTTCAATGTACT...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CAA 90 bp AATGAAGTTATGTTCCCATGGGGATTATGGCTGCCTCTGCTGTGTCATACAGGTATTGCCTCAGTATTCTaGGTGAGGCATGACAGAAGT +
Preference number: 3 (lower is better)
Translates to: NEVMFPWGLWLPLLCHTGIASVF*VRHDRS
Trigger: ACTTCTGTCATGCCTCACCAAGAATACTGAGGCAAT...ACCTGTATGACACAGCAGAGGCAGCCATAATCCCCATGGGAACATAACTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CAA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGATTTGTGTTTGCACATTaGAAGAAGCAGTCATCTCTT +
Preference number: 3 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRFVFAH*KKQSSL
Trigger: AAGAGATGACTGCTTCTTCAAATGTGCAAACACAAA...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CAA 90 bp GGGCTGAAAACTTGTTCCAGGCTGCAAGTCTCCCTGTTGAGAAAGCAAGCAGCATCTTCAAATGATCACTaGAATTCTTTGTCAGGCAGT +
Preference number: 3 (lower is better)
Translates to: GLKTCSRLQVSLLRKQAASSNDH*NSLSGS
Trigger: ACTGCCTGACAAAGAATTCAAGTGATCATTTGAAGA...TGCTGCTTGCTTTCTCAACAGGGAGACTTGCAGCCTGGAACAAGTTTTCAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CAA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATGCTATAAACTTTCACTaGGATTCTGGAGCTCTCACA +
Preference number: 3 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDAINFH*DSGALT
Trigger: TGTGAGAGCTCCAGAATCCAAGTGAAAGTTTATAGC...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CAA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTTTTGTTCCTTTGGCTTaGCTAAGTTTCCTTGATTCC +
Preference number: 3 (lower is better)
Translates to: VSLLRKQAALSGFCFPACFVPLA*LSFLDS
Trigger: GGAATCAAGGAAACTTAGCAAAGCCAAAGGAACAAA...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CAA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATTCCTTGGTTGAAGTTTaGTTTAGTGTACTAGTTGGC +
Preference number: 3 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDSLVEV*FSVLVG
Trigger: GCCAACTAGTACACTAAACAAAACTTCAACCAAGGA...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CCA 72 bp CTTCTCATTTGGGTAGACTATGTCAGAAGGAAGATCTaGGGCTCAAGGGCTACTTATCAGATTGTTTTTGTC +
Preference number: 3 (lower is better)
Translates to: LLIWVDYVRRKI*GSRATYQIVFV
Trigger: GACAAAAACAATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAAATGAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR-3UTR CAA 90 bp AATGAAGTTATGTTCCCATGGGGATTATGGCTGCCTCTGCTGTGTCATACAGGTTCTTCAAATGATCACTaGAATTCTTTGTCAGGCAGT +
Preference number: 3 (lower is better)
Translates to: NEVMFPWGLWLPLLCHTGSSNDH*NSLSGS
Trigger: ACTGCCTGACAAAGAATTCAAGTGATCATTTGAAGA...ACCTGTATGACACAGCAGAGGCAGCCATAATCCCCATGGGAACATAACTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR TCA 72 bp TGCTGTATAACACACAGGACAATCCCTTACATAGGGTaGAGGATATTCCTAGTCTCCACTTTAATGCTGTCT +
Preference number: 3 (lower is better)
Translates to: CCITHRTIPYIG*RIFLVSTLMLS
Trigger: AGACAGCATTAAAGTGGAGACTAGGAATATCCTTCACCCTATGTAAGGGATTGTCCTGTGTGTTATACAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR TCA 72 bp TCTTCTTGGTTTGGATCCATTGCTGGTGAGCTAGTGTaGTCTTTCAAGGGTGTTAAAGAACCTTGTTTTGTC +
Preference number: 3 (lower is better)
Translates to: SSWFGSIAGELV*SFKGVKEPCFV
Trigger: GACAAAACAAGGTTCTTTAACACCCTTGAAAGATCACACTAGCTCACCAGCAATGGATCCAAACCAAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CCA 72 bp ATATTACCAGATTTGTTTTTCTGGTTCCTTCTCATTTaGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCA +
Preference number: 3 (lower is better)
Translates to: ILPDLFFWFLLI*VDYVRRKIWGS
Trigger: TGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAAATGAGAAGGAACCAGAAAAACAAATCTGGTAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CCA 72 bp GAACTCTCATGGTCCAAGTGTTTATCTAGGAGTCTATaGTCCTTGGTTGAAGTTTTGTTTAGTGTACTAGTT +
Preference number: 3 (lower is better)
Translates to: ELSWSKCLSRSL*SLVEVLFSVLV
Trigger: AACTAGTACACTAAACAAAACTTCAACCAAGGACCATAGACTCCTAGATAAACACTTGGACCATGAGAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR TCA 72 bp CCTGTGTTTTTGTGTGGGTCACCATGTTTCTTCAAATaGTCACTTGAATTCTTTGTCAGGCAGTTCATATTT +
Preference number: 3 (lower is better)
Translates to: PVFLCGSPCFFK*SLEFFVRQFIF
Trigger: AAATATGAACTGCCTGACAAAGAATTCAAGTGATCATTTGAAGAAACATGGTGACCCACACAAAAACACAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR TCA 72 bp TATGATTGCAATCTCTTTCAAACCTCCACAGCCATGTaGCTAACTTTCTTATCAGCTACTATTTACTTTCTG +
Preference number: 3 (lower is better)
Translates to: YDCNLFQTSTAM*LTFLSATIYFL
Trigger: CAGAAAGTAAATAGTAGCTGATAAGAAAGTTAGTCACATGGCTGTGGAGGTTTGAAAGAGATTGCAATCATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp ATGTGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGGGGGATGTGGGTGGATaGGCCAGCTTCTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: MWVDGPASGHHAQAHCRVGDVGG*ASFWAP
Trigger: TGGTGCCCAGAAGCTGGCCCATCCACCCACATCCCC...CACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp ATGTGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGGCTTGGGGATGTGGGTaGATGGGCCAGCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: MWVDGPASGHHAQAHCRVAWGCG*MGQLLG
Trigger: GCCCAGAAGCTGGCCCATCCACCCACATCCCCAAGC...CACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp TGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCAAGGCAGGCCTAGTGCTTaGGGATGTGGGTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: WVDGPASGHHAQAHCRVQGRPSA*GCGWMG
Trigger: GCCCATCCACCCACATCCCCAAGCACTAGGCCTGCC...TTGCACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp TGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCAACAGGGGGTACGTGACTaGGGGCTGCATGCACCAGTA +
Preference number: 4 (lower is better)
Translates to: WVDGPASGHHAQAHCRVQQGVRD*GLHAPV
Trigger: TACTGGTGCATGCAGCCCCCAGTCACGTACCCCCTG...TTGCACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp ATGTGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGGCTGGTGAGCAGGGCTaGAAACTTGTTCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: MWVDGPASGHHAQAHCRVAGEQG*KLVPGC
Trigger: GCAGCCTGGAACAAGTTTTCAGCCCTGCTCACCAGC...CACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp ATGTGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGTTGCTGTGGCCACTGTaGGGGATGGGGGTGTGGTTA +
Preference number: 4 (lower is better)
Translates to: MWVDGPASGHHAQAHCRVLLWPL*GMGVWL
Trigger: TAACCACACCCCCATCCCTCACAGTGGCCACAGCAA...CACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR GCA 90 bp TGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCAACTCACCCAGCTCCCATaGTGTCCAAGTGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: WVDGPASGHHAQAHCRVQLTQLP*CPSGHV
Trigger: GACATGGCCACTTGGACAGCATGGGAGCTGGGTGAG...TTGCACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp ATGTGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCCCATCTCCTGGGGATaGGGCTTCCTGAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: MWVDGPASGHHAQAHCRVPISWG*GFLRAK
Trigger: TTTGGCTCTCAGGAAGCCCCATCCCCAGGAGATGGG...CACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp CTGTGTCATACAGGTTGCCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGCCTCCAAGCAGGGGGTACGTaGCTGGGGGCTGCATGCACC +
Preference number: 4 (lower is better)
Translates to: LCHTGCQGSGGKPAVIGLQAGGT*LGAACT
Trigger: GGTGCATGCAGCCCCCAGTCACGTACCCCCTGCTTG...GAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp TGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCAATCCTGTCTCAAGAGCTaGGCTCCCCCAGTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: WVDGPASGHHAQAHCRVQSCLKS*APPVSN
Trigger: ATTGCTCACTGGGGGAGCTCAGCTCTTGAGACAGGA...TTGCACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp TGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCAACATGAAGAAACGGGATaGACAGGGAGCACATCAGGT +
Preference number: 4 (lower is better)
Translates to: WVDGPASGHHAQAHCRVQHEETG*TGSTSG
Trigger: ACCTGATGTGCTCCCTGTTCATCCCGTTTCTTCATG...TTGCACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp ATGTGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGTCTATATGCTGTCTCTaGGCTGGAGCCATGTCCCAA +
Preference number: 4 (lower is better)
Translates to: MWVDGPASGHHAQAHCRVSICCL*AGAMSQ
Trigger: TTGGGACATGGCTCCAGCTCAGAGACAGCATATAGA...CACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp TGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCAAATTCTTGGTGAGGCATaGCAGAAGTGGTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: WVDGPASGHHAQAHCRVQILGEA*QKWSSW
Trigger: CCAAGAGGACCACTTCTGTCATGCCTCACCAAGAAT...TTGCACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp ATGTGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGGAAGAACTCATGAGATaGGGGGATCTCTCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: MWVDGPASGHHAQAHCRVEELMR*GDLSLC
Trigger: GCACAAAGAGAGATCCCCTCATCTCATGAGTTCTTC...CACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp CTGTGTCATACAGGTTGCCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGCCTCTTGCTGTGGCCACTGTaGGGGATGGGGGTGTGGTTA +
Preference number: 4 (lower is better)
Translates to: LCHTGCQGSGGKPAVIGLLLWPL*GMGVWL
Trigger: TAACCACACCCCCATCCCTCACAGTGGCCACAGCAA...GAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GGGCTGAAAACTTGTTCCAGGCTGCAAGTCTCCCTGTTGAGAAAGCAAGCAGCAGGATGGGCCAGCTTCTaGGCACCATGCACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GLKTCSRLQVSLLRKQAAGWASF*APCTGP
Trigger: TGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCC...TGCTGCTTGCTTTCTCAACAGGGAGACTTGCAGCCTGGAACAAGTTTTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGAGGCAGGCCTAGTGCTTaGGGATGTGGGTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRGRPSA*GCGWMG
Trigger: GCCCATCCACCCACATCCCCAAGCACTAGGCCTGCC...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGATCTGGGCTGGCCAGTTaGCAGGGTCTATGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRSGLAS*QGLWAG
Trigger: GCCTGCCCATAGACCCTGCCAACTGGCCAGCCCAGA...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp ATAGGCCTCACCCAGCTCCCATGCTGTCCAAGTGGCCATGTCACTCCCAATGTGTCAGTCCCTCAGGCATaGATACCAGTGCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: IGLTQLPCCPSGHVTPNVSVPQA*IPVPGP
Trigger: TGGACCAGGCACTGGTATCCATGCCTGAGGGACTGA...CACATTGGGAGTGACATGGCCACTTGGACAGCATGGGAGCTGGGTGAGGCCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp CTGTGTCATACAGGTTGCCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGCCTCGGGGATGGGGCTTCCTaGGAGCCAAACTGCAATGAT +
Preference number: 4 (lower is better)
Translates to: LCHTGCQGSGGKPAVIGLGDGAS*EPNCND
Trigger: ATCATTGCAGTTTGGCTCTCAGGAAGCCCCATCCCC...GAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR GCA 90 bp ATGTGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGGCTGTCTTTCCAAATTaGCCTCATGTCAGCCTCTTA +
Preference number: 4 (lower is better)
Translates to: MWVDGPASGHHAQAHCRVAVFPN*PHVSLL
Trigger: TAAGAGGCTGACATGAGGGCAATTTGGAAAGACAGC...CACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTGGGGATGTGGGTGGATaGGCCAGCTTCTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: SQVVSGTIELPRDYALCLGDVGG*ASFWAP
Trigger: TGGTGCCCAGAAGCTGGCCCATCCACCCACATCCCC...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp TGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCAATGCCCTAAGGTGGCCTaGATAAGTATTCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: WVDGPASGHHAQAHCRVQCPKVA*ISIPVS
Trigger: AGAAACTGGAATACTTATCCAGGCCACCTTAGGGCA...TTGCACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp ATAGGCCTCACCCAGCTCCCATGCTGTCCAAGTGGCCATGTCACTCCCAATGTGCATGAAGAAACGGGATaGACAGGGAGCACATCAGGT +
Preference number: 4 (lower is better)
Translates to: IGLTQLPCCPSGHVTPNVHEETG*TGSTSG
Trigger: ACCTGATGTGCTCCCTGTTCATCCCGTTTCTTCATG...CACATTGGGAGTGACATGGCCACTTGGACAGCATGGGAGCTGGGTGAGGCCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp ATGTGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGTCAGCACATAGGAAATaGTCACGAATCCAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: MWVDGPASGHHAQAHCRVSAHRK*SRIQRE
Trigger: TTCCCTTTGGATTCGTGATCATTTCCTATGTGCTGA...CACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp ATGTGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCTGTGGTGGCTGCTGTaGATAGCCATTTTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: MWVDGPASGHHAQAHCRVLWWLL*IAIFRK
Trigger: TTTTCTAAAAATGGCTATTCACAGCAGCCACCACAG...CACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATCAAGCAGGGGGTACGTaGCTGGGGGCTGCATGCACC +
Preference number: 4 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDQAGGT*LGAACT
Trigger: GGTGCATGCAGCCCCCAGTCACGTACCCCCTGCTTG...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR GCA 90 bp GGGCTGAAAACTTGTTCCAGGCTGCAAGTCTCCCTGTTGAGAAAGCAAGCAGCACTCACCCAGCTCCCATaGTGTCCAAGTGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: GLKTCSRLQVSLLRKQAALTQLP*CPSGHV
Trigger: GACATGGCCACTTGGACAGCATGGGAGCTGGGTGAG...TGCTGCTTGCTTTCTCAACAGGGAGACTTGCAGCCTGGAACAAGTTTTCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR GCA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTTCCTTCGGTGGGGCTTaGTGTGGCCACTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SQVVSGTIELPRDYALCLSFGGA*CGHCEG
Trigger: TCCCTCACAGTGGCCACAGCAAGCCCCACCGAAGGA...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp TGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCAAATAAGGCCAAGAATGTaGCCCTGTAGTCAAGTACAT +
Preference number: 4 (lower is better)
Translates to: WVDGPASGHHAQAHCRVQIRPRM*PCSQVH
Trigger: ATGTACTTGACTACAGGGCCACATTCTTGGCCTTAT...TTGCACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp ATGTGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGATAAGGCCAAGAATGTaGCCCTGTAGTCAAGTACAT +
Preference number: 4 (lower is better)
Translates to: MWVDGPASGHHAQAHCRVIRPRM*PCSQVH
Trigger: ATGTACTTGACTACAGGGCCACATTCTTGGCCTTAT...CACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp CTGTGTCATACAGGTTGCCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGCCTCTTCTCAGGTGGTGAGTaGGACCATAGAGCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: LCHTGCQGSGGKPAVIGLFSGGE*DHRAPK
Trigger: CTTGGGAGCTCTATGGTCCCACTCACCACCTGAGAA...GAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp TGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCAATTGTTATTTCTCTGCTaGTCTAGCCATCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: WVDGPASGHHAQAHCRVQLLFLC*SSHPTE
Trigger: CTCTGTTGGATGGCTAGACCAGCAGAGAAATAACAA...TTGCACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTCAGGGGGTACGTGACTaGGGGCTGCATGCACCAGTA +
Preference number: 4 (lower is better)
Translates to: SQVVSGTIELPRDYALCLQGVRD*GLHAPV
Trigger: TACTGGTGCATGCAGCCCCCAGTCACGTACCCCCTG...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp TGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCAATCCTGTTCTACAGGATaGAAACACATTCAGGTCATA +
Preference number: 4 (lower is better)
Translates to: WVDGPASGHHAQAHCRVQSCSTG*KHIQVI
Trigger: TATGACCTGAATGTGTTTTCATCCTGTAGAACAGGA...TTGCACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp ATAGGCCTCACCCAGCTCCCATGCTGTCCAAGTGGCCATGTCACTCCCAATGTGTGCAAGTCTCCCTGTTaGGAAAGCAAGCAGCACTTT +
Preference number: 4 (lower is better)
Translates to: IGLTQLPCCPSGHVTPNVCKSPC*ESKQHF
Trigger: AAAGTGCTGCTTGCTTTCTCAACAGGGAGACTTGCA...CACATTGGGAGTGACATGGCCACTTGGACAGCATGGGAGCTGGGTGAGGCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp GGGCTGAAAACTTGTTCCAGGCTGCAAGTCTCCCTGTTGAGAAAGCAAGCAGCATCCTGTCTCAAGAGCTaGGCTCCCCCAGTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: GLKTCSRLQVSLLRKQAASCLKS*APPVSN
Trigger: ATTGCTCACTGGGGGAGCTCAGCTCTTGAGACAGGA...TGCTGCTTGCTTTCTCAACAGGGAGACTTGCAGCCTGGAACAAGTTTTCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR GCA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTTCCTTCGGTGGGGCTTaGTGTGGCCACTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: VSLLRKQAALSGFCFPACSFGGA*CGHCEG
Trigger: TCCCTCACAGTGGCCACAGCAAGCCCCACCGAAGGA...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp AATGAAGTTATGTTCCCATGGGGATTATGGCTGCCTCTGCTGTGTCATACAGGTTCTGGGCTGGCCAGTTaGCAGGGTCTATGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: NEVMFPWGLWLPLLCHTGSGLAS*QGLWAG
Trigger: GCCTGCCCATAGACCCTGCCAACTGGCCAGCCCAGA...ACCTGTATGACACAGCAGAGGCAGCCATAATCCCCATGGGAACATAACTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp ATAGGCCTCACCCAGCTCCCATGCTGTCCAAGTGGCCATGTCACTCCCAATGTGACCTCCACAGCCATGTaGCTAACTTTCTTATCAGCT +
Preference number: 4 (lower is better)
Translates to: IGLTQLPCCPSGHVTPNVTSTAM*LTFLSA
Trigger: AGCTGATAAGAAAGTTAGTCACATGGCTGTGGAGGT...CACATTGGGAGTGACATGGCCACTTGGACAGCATGGGAGCTGGGTGAGGCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp ATAGGCCTCACCCAGCTCCCATGCTGTCCAAGTGGCCATGTCACTCCCAATGTGATTTGTAACCCAGTTTaGGGCCTCTGTACACTGTCA +
Preference number: 4 (lower is better)
Translates to: IGLTQLPCCPSGHVTPNVICNPV*GLCTLS
Trigger: TGACAGTGTACAGAGGCCTCAAACTGGGTTACAAAT...CACATTGGGAGTGACATGGCCACTTGGACAGCATGGGAGCTGGGTGAGGCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp CTGTGTCATACAGGTTGCCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGCCTCATTCCACCATCTTGTTaGCATCACTCCTTTCACCCG +
Preference number: 4 (lower is better)
Translates to: LCHTGCQGSGGKPAVIGLIPPSC*HHSFHP
Trigger: CGGGTGAAAGGAGTGATGTCAACAAGATGGTGGAAT...GAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp CTGTGTCATACAGGTTGCCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGCCTCGAAGAACTCATGAGATaGGGGGATCTCTCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: LCHTGCQGSGGKPAVIGLEELMR*GDLSLC
Trigger: GCACAAAGAGAGATCCCCTCATCTCATGAGTTCTTC...GAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp ATGTGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGTTTGCTAAGTTTCCTTaGTTCCTTGTGTTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: MWVDGPASGHHAQAHCRVFAKFP*FLVFPV
Trigger: TACAGGAAACACAAGGAATCAAGGAAACTTAGCAAA...CACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTGCTGGTGAGCAGGGCTaGAAACTTGTTCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VSLLRKQAALSGFCFPACAGEQG*KLVPGC
Trigger: GCAGCCTGGAACAAGTTTTCAGCCCTGCTCACCAGC...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGATACTCTGTGCTGGCTTaGGTGAGGGGTGATTCAGGT +
Preference number: 4 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRYSVLA*VRGDSG
Trigger: ACCTGAATCACCCCTCACCCAAGCCAGCACAGAGTA...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp TGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCAATTATCTAGGAGTCTATaGTCCTTGGTTGAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: WVDGPASGHHAQAHCRVQLSRSL*SLVEVL
Trigger: CAAAACTTCAACCAAGGACCATAGACTCCTAGATAA...TTGCACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGAATCCAACAGAGCTTCTaGGCTCTGAGCTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRIQQSF*ALSWYW
Trigger: CCAGTACCAGCTCAGAGCCCAGAAGCTCTGTTGGAT...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp TGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCAACCAGATTTGTTTTTCTaGTTCCTTCTCATTTGGGTA +
Preference number: 4 (lower is better)
Translates to: WVDGPASGHHAQAHCRVQPDLFF*FLLIWV
Trigger: TACCCAAATGAGAAGGAACCAGAAAAACAAATCTGG...TTGCACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR GCA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTGGGGATCTCTCTTTGTaGTACTCTGTGCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SQVVSGTIELPRDYALCLGDLSL*YSVLAW
Trigger: CCAAGCCAGCACAGAGTAGCACAAAGAGAGATCCCC...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR GCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGAGCTCCCAAGAGATTATaGCCTTTGTCTTCGGCTACC +
Preference number: 4 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRAPKRL*PLSSAT
Trigger: GGTAGCCGAAGACAAAGGGCATAATCTCTTGGGAGC...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR GCA 90 bp GGGCTGAAAACTTGTTCCAGGCTGCAAGTCTCCCTGTTGAGAAAGCAAGCAGCAGCTCCCAAGAGATTATaGCCTTTGTCTTCGGCTACC +
Preference number: 4 (lower is better)
Translates to: GLKTCSRLQVSLLRKQAAAPKRL*PLSSAT
Trigger: GGTAGCCGAAGACAAAGGGCATAATCTCTTGGGAGC...TGCTGCTTGCTTTCTCAACAGGGAGACTTGCAGCCTGGAACAAGTTTTCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR GCA 90 bp ATGTGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCAGGGATTTTTACAATaGTTTTCCATACAATGTCTG +
Preference number: 4 (lower is better)
Translates to: MWVDGPASGHHAQAHCRVQGFLQ*FSIQCL
Trigger: CAGACATTGTATGGAAAAGCATTGTAAAAATCCCTG...CACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp ATAGGCCTCACCCAGCTCCCATGCTGTCCAAGTGGCCATGTCACTCCCAATGTGAGAGAACTTGTTGCCTaGGTCTTCAGCTTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: IGLTQLPCCPSGHVTPNVRELVA*VFSFCK
Trigger: TTTACAGAAGCTGAAGACCCAGGCAACAAGTTCTCT...CACATTGGGAGTGACATGGCCACTTGGACAGCATGGGAGCTGGGTGAGGCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGAATGCTGTCTCTGAGCTaGAGCCATGTCCCAATCACT +
Preference number: 4 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRMLSLS*SHVPIT
Trigger: AGTGATTGGGACATGGCTCCAGCTCAGAGACAGCAT...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp AATGAAGTTATGTTCCCATGGGGATTATGGCTGCCTCTGCTGTGTCATACAGGTAGTTGGCAGGGTCTATaGGCAGGCAGGCCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: NEVMFPWGLWLPLLCHTGSWQGL*AGRPSA
Trigger: AGCACTAGGCCTGCCTGCCCATAGACCCTGCCAACT...ACCTGTATGACACAGCAGAGGCAGCCATAATCCCCATGGGAACATAACTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GGGCTGAAAACTTGTTCCAGGCTGCAAGTCTCCCTGTTGAGAAAGCAAGCAGCAGAAAGACCATTAGGTTaGGGCAGGGTTAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: GLKTCSRLQVSLLRKQAAERPLG*GRVRHV
Trigger: CACATGCCTAACCCTGCCCCAACCTAATGGTCTTTC...TGCTGCTTGCTTTCTCAACAGGGAGACTTGCAGCCTGGAACAAGTTTTCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTGCTCTGAGCTGGTACTaGGGGGTGTCTGTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: VSLLRKQAALSGFCFPACALSWY*GVSVKS
Trigger: ACTCTTCACAGACACCCCCCAGTACCAGCTCAGAGC...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGCCCATCTCCTGGGGATaGGGCTTCCTGAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKPISWG*GFLRAK
Trigger: TTTGGCTCTCAGGAAGCCCCATCCCCAGGAGATGGG...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp CTGTGTCATACAGGTTGCCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGCCTCTCAGCACATAGGAAATaGTCACGAATCCAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LCHTGCQGSGGKPAVIGLSAHRK*SRIQRE
Trigger: TTCCCTTTGGATTCGTGATCATTTCCTATGTGCTGA...GAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTTCCCCGAGTAGACTGTaGCCTCACATTTGTAACCCA +
Preference number: 4 (lower is better)
Translates to: SQVVSGTIELPRDYALCLSPSRL*PHICNP
Trigger: TGGGTTACAAATGTGAGGTCACAGTCTACTCGGGGA...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp CTGTGTCATACAGGTTGCCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGCCTCCTGTGGTGGCTGCTGTaGATAGCCATTTTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: LCHTGCQGSGGKPAVIGLLWWLL*IAIFRK
Trigger: TTTTCTAAAAATGGCTATTCACAGCAGCCACCACAG...GAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGATGCAAGTCTCCCTGTTaGGAAAGCAAGCAGCACTTT +
Preference number: 4 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRCKSPC*ESKQHF
Trigger: AAAGTGCTGCTTGCTTTCTCAACAGGGAGACTTGCA...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp AATGAAGTTATGTTCCCATGGGGATTATGGCTGCCTCTGCTGTGTCATACAGGTGCTGAGCTCCCCCAGTaGGCAATTCCTGTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: NEVMFPWGLWLPLLCHTGAELPQ*AIPVPF
Trigger: AAAAGGGACAGGAATTGCTCACTGGGGGAGCTCAGC...ACCTGTATGACACAGCAGAGGCAGCCATAATCCCCATGGGAACATAACTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR GCA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTCTGTGTCATACAGGTTaGCAGGGAAGTGGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: SQVVSGTIELPRDYALCLLCHTG*QGSGGK
Trigger: CTTTCCACCACTTCCCTGGCAACCTGTATGACACAG...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp CTGTGTCATACAGGTTGCCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGCCTCAGAGAACTTGTTGCCTaGGTCTTCAGCTTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: LCHTGCQGSGGKPAVIGLRELVA*VFSFCK
Trigger: TTTACAGAAGCTGAAGACCCAGGCAACAAGTTCTCT...GAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTATGCTGTCTCTGAGCTaGAGCCATGTCCCAATCACT +
Preference number: 4 (lower is better)
Translates to: SQVVSGTIELPRDYALCLMLSLS*SHVPIT
Trigger: AGTGATTGGGACATGGCTCCAGCTCAGAGACAGCAT...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTTTCTCAGGTGGTGAGTaGGACCATAGAGCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: VSLLRKQAALSGFCFPACFSGGE*DHRAPK
Trigger: CTTGGGAGCTCTATGGTCCCACTCACCACCTGAGAA...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp AATGAAGTTATGTTCCCATGGGGATTATGGCTGCCTCTGCTGTGTCATACAGGTGCTCTGAGCTGGTACTaGGGGGTGTCTGTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: NEVMFPWGLWLPLLCHTGALSWY*GVSVKS
Trigger: ACTCTTCACAGACACCCCCCAGTACCAGCTCAGAGC...ACCTGTATGACACAGCAGAGGCAGCCATAATCCCCATGGGAACATAACTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp GGGCTGAAAACTTGTTCCAGGCTGCAAGTCTCCCTGTTGAGAAAGCAAGCAGCATGGATCCTAGATTCATaGAGAAACGGGATGAACAGG +
Preference number: 4 (lower is better)
Translates to: GLKTCSRLQVSLLRKQAAWILDS*RNGMNR
Trigger: CCTGTTCATCCCGTTTCTTCATGAATCTAGGATCCA...TGCTGCTTGCTTTCTCAACAGGGAGACTTGCAGCCTGGAACAAGTTTTCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGAATTTGTAACCCAGTTTaGGGCCTCTGTACACTGTCA +
Preference number: 4 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRICNPV*GLCTLS
Trigger: TGACAGTGTACAGAGGCCTCAAACTGGGTTACAAAT...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGATCTTGGTTAGCATCCTaGAAGTCAGGGGAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRSWLAS*KSGEVV
Trigger: TACAACTTCCCCTGACTTTCAGGATGCTAACCAAGA...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp GGGCTGAAAACTTGTTCCAGGCTGCAAGTCTCCCTGTTGAGAAAGCAAGCAGCATCTTGGTTAGCATCCTaGAAGTCAGGGGAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: GLKTCSRLQVSLLRKQAASWLAS*KSGEVV
Trigger: TACAACTTCCCCTGACTTTCAGGATGCTAACCAAGA...TGCTGCTTGCTTTCTCAACAGGGAGACTTGCAGCCTGGAACAAGTTTTCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp ATAGGCCTCACCCAGCTCCCATGCTGTCCAAGTGGCCATGTCACTCCCAATGTGTTGTGTTTGCACATTTaGAGAAGCAGTCATCTCTTT +
Preference number: 4 (lower is better)
Translates to: IGLTQLPCCPSGHVTPNVLCLHI*RSSHLF
Trigger: AAAGAGATGACTGCTTCTTCAAATGTGCAAACACAA...CACATTGGGAGTGACATGGCCACTTGGACAGCATGGGAGCTGGGTGAGGCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTAAGAGTCCTGTGATGTaGTCTGTCTTCAGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SQVVSGTIELPRDYALCLKSPVM*SVFSPS
Trigger: TGAGGGACTGAAGACAGATCACATCACAGGACTCTT...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTTGCGTGAGAGAGTCATaGTCAATTGAGCAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VSLLRKQAALSGFCFPACCVRES*SIEQAG
Trigger: CCCTGCTTGCTCAATTGATCATGACTCTCTCACGCA...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR GCA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTTACCAAAAGTCCCACTaGTCTGTGCTGCTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: VSLLRKQAALSGFCFPACYQKSH*SVLLSE
Trigger: CTCTGAGAGCAGCACAGAGCAGTGGGACTTTTGGTA...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641064.1
CDS-3UTR GCA 90 bp GGGCTGAAAACTTGTTCCAGGCTGCAAGTCTCCCTGTTGAGAAAGCAAGCAGCAGCTGTCTTTCCAAATTaGCCTCATGTCAGCCTCTTA +
Preference number: 4 (lower is better)
Translates to: GLKTCSRLQVSLLRKQAAAVFPN*PHVSLL
Trigger: TAAGAGGCTGACATGAGGGCAATTTGGAAAGACAGC...TGCTGCTTGCTTTCTCAACAGGGAGACTTGCAGCCTGGAACAAGTTTTCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR GCA 90 bp GGGCTGAAAACTTGTTCCAGGCTGCAAGTCTCCCTGTTGAGAAAGCAAGCAGCACCATGTCCCAATCACTaGTGTATAACACACAGGACA +
Preference number: 4 (lower is better)
Translates to: GLKTCSRLQVSLLRKQAAPCPNH*CITHRT
Trigger: TGTCCTGTGTGTTATACAGCAGTGATTGGGACATGG...TGCTGCTTGCTTTCTCAACAGGGAGACTTGCAGCCTGGAACAAGTTTTCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGAGGAGACTCATCCTATTaGCTAAAGGTACAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRGDSSY*LKVQSR
Trigger: TCTGCTCTGTACCTTTAGCCAATAGGATGAGTCTCC...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATTACTCTGTGCTGGCTTaGGTGAGGGGTGATTCAGGT +
Preference number: 4 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDYSVLA*VRGDSG
Trigger: ACCTGAATCACCCCTCACCCAAGCCAGCACAGAGTA...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGAGGTTGCCAGGGAAGTaGTGGAAAGCCAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKRLPGK*WKASSD
Trigger: ATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCT...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp ATAGGCCTCACCCAGCTCCCATGCTGTCCAAGTGGCCATGTCACTCCCAATGTGTTATCTAGGAGTCTATaGTCCTTGGTTGAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: IGLTQLPCCPSGHVTPNVLSRSL*SLVEVL
Trigger: CAAAACTTCAACCAAGGACCATAGACTCCTAGATAA...CACATTGGGAGTGACATGGCCACTTGGACAGCATGGGAGCTGGGTGAGGCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp AATGAAGTTATGTTCCCATGGGGATTATGGCTGCCTCTGCTGTGTCATACAGGTATGGATACCAGTGCCTaGTCCAGTGGAGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: NEVMFPWGLWLPLLCHTGMDTSA*SSGGSS
Trigger: ACTGCTACCTCCACTGGACCAGGCACTGGTATCCAT...ACCTGTATGACACAGCAGAGGCAGCCATAATCCCCATGGGAACATAACTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGAAGGATTTCAGGCTATTaGTGCCCCAATGAGATTTGT +
Preference number: 4 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRRISGY*CPNEIC
Trigger: ACAAATCTCATTGGGGCATCAATAGCCTGAAATCCT...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTACCTCCACAGCCATGTaGCTAACTTTCTTATCAGCT +
Preference number: 4 (lower is better)
Translates to: SQVVSGTIELPRDYALCLTSTAM*LTFLSA
Trigger: AGCTGATAAGAAAGTTAGTCACATGGCTGTGGAGGT...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGTCCCCGAGTAGACTGTaGCCTCACATTTGTAACCCA +
Preference number: 4 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKSPSRL*PHICNP
Trigger: TGGGTTACAAATGTGAGGTCACAGTCTACTCGGGGA...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp AATGAAGTTATGTTCCCATGGGGATTATGGCTGCCTCTGCTGTGTCATACAGGTATTCTTGGTGAGGCATaGCAGAAGTGGTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: NEVMFPWGLWLPLLCHTGILGEA*QKWSSW
Trigger: CCAAGAGGACCACTTCTGTCATGCCTCACCAAGAAT...ACCTGTATGACACAGCAGAGGCAGCCATAATCCCCATGGGAACATAACTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR GCA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTCCATGTCCCAATCACTaGTGTATAACACACAGGACA +
Preference number: 4 (lower is better)
Translates to: SQVVSGTIELPRDYALCLPCPNH*CITHRT
Trigger: TGTCCTGTGTGTTATACAGCAGTGATTGGGACATGG...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGGAAAGACCATTAGGTTaGGGCAGGGTTAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKERPLG*GRVRHV
Trigger: CACATGCCTAACCCTGCCCCAACCTAATGGTCTTTC...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTGTGGGATATGAGAACTaGGTCTTGGATCCTAGATTC +
Preference number: 4 (lower is better)
Translates to: VSLLRKQAALSGFCFPACVGYEN*VLDPRF
Trigger: GAATCTAGGATCCAAGACTCAGTTCTCATATCCCAC...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTGAATGTCAAATGAATTaGACACCACCTGTCGAGGTC +
Preference number: 4 (lower is better)
Translates to: VSLLRKQAALSGFCFPACECQMN*TPPVEV
Trigger: GACCTCGACAGGTGGTGTTCAATTCATTTGACATTC...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp AATGAAGTTATGTTCCCATGGGGATTATGGCTGCCTCTGCTGTGTCATACAGGTATTCCACCATCTTGTTaGCATCACTCCTTTCACCCG +
Preference number: 4 (lower is better)
Translates to: NEVMFPWGLWLPLLCHTGIPPSC*HHSFHP
Trigger: CGGGTGAAAGGAGTGATGTCAACAAGATGGTGGAAT...ACCTGTATGACACAGCAGAGGCAGCCATAATCCCCATGGGAACATAACTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp AATGAAGTTATGTTCCCATGGGGATTATGGCTGCCTCTGCTGTGTCATACAGGTAAGAGTCCTGTGATGTaGTCTGTCTTCAGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: NEVMFPWGLWLPLLCHTGKSPVM*SVFSPS
Trigger: TGAGGGACTGAAGACAGATCACATCACAGGACTCTT...ACCTGTATGACACAGCAGAGGCAGCCATAATCCCCATGGGAACATAACTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTGGAGACTCATCCTATTaGCTAAAGGTACAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: VSLLRKQAALSGFCFPACGDSSY*LKVQSR
Trigger: TCTGCTCTGTACCTTTAGCCAATAGGATGAGTCTCC...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CAA 72 bp GGGCTGAAAACTTGTTCCAGGCTGCAAGTCTCCCTGTaGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: GLKTCSRLQVSL*RKQAALSGFCF
Trigger: AAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGACTTGCAGCCTGGAACAAGTTTTCAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp AATGAAGTTATGTTCCCATGGGGATTATGGCTGCCTCTGCTGTGTCATACAGGTTGGATCCTAGATTCATaGAGAAACGGGATGAACAGG +
Preference number: 4 (lower is better)
Translates to: NEVMFPWGLWLPLLCHTGWILDS*RNGMNR
Trigger: CCTGTTCATCCCGTTTCTTCATGAATCTAGGATCCA...ACCTGTATGACACAGCAGAGGCAGCCATAATCCCCATGGGAACATAACTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATGAGATTTGTGGGATATaGGAACTGAGTCTTGGATCC +
Preference number: 4 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDEICGI*ELSLGS
Trigger: GGATCCAAGACTCAGTTCTCATATCCCACAAATCTC...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp AATGAAGTTATGTTCCCATGGGGATTATGGCTGCCTCTGCTGTGTCATACAGGTGAGATTTGTGGGATATaGGAACTGAGTCTTGGATCC +
Preference number: 4 (lower is better)
Translates to: NEVMFPWGLWLPLLCHTGEICGI*ELSLGS
Trigger: GGATCCAAGACTCAGTTCTCATATCCCACAAATCTC...ACCTGTATGACACAGCAGAGGCAGCCATAATCCCCATGGGAACATAACTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTTGGATGTGTGCTAGATaGGAGACACTTCTAGGTTTA +
Preference number: 4 (lower is better)
Translates to: VSLLRKQAALSGFCFPACWMCAR*ETLLGL
Trigger: TAAACCTAGAAGTGTCTCTCATCTAGCACACATCCA...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTAGAGCCAAACTGCAATaGTTGTTATTTCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VSLLRKQAALSGFCFPACRAKLQ*LLFLCW
Trigger: CCAGCAGAGAAATAACAATCATTGCAGTTTGGCTCT...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp TGTAGCTTCACATTTGTGTTTGCACATTTGAAGAAGCAGTCATCTCTTTTAGTCAGTTGGCAGGGTCTATaGGCAGGCAGGCCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: CSFTFVFAHLKKQSSLLVSWQGL*AGRPSA
Trigger: AGCACTAGGCCTGCCTGCCCATAGACCCTGCCAACT...GACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTTCAGAGATTTCTTCTTaGTTTGGATCCATTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SQVVSGTIELPRDYALCLSEISS*FGSIAG
Trigger: ACCAGCAATGGATCCAAACCAAGAAGAAATCTCTGA...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATAGGATTTCAGGCTATTaGTGCCCCAATGAGATTTGT +
Preference number: 4 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDRISGY*CPNEIC
Trigger: ACAAATCTCATTGGGGCATCAATAGCCTGAAATCCT...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGTGGATGTGTGCTAGATaGGAGACACTTCTAGGTTTA +
Preference number: 4 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKWMCAR*ETLLGL
Trigger: TAAACCTAGAAGTGTCTCTCATCTAGCACACATCCA...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATCTGTATGTTGGTGGATaGGAGATACAACTGTCGATT +
Preference number: 4 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDLYVGG*EIQLSI
Trigger: AATCGACAGTTGTATCTCTCATCCACCAACATACAG...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTTTTCTGAATAGGTCTTaGAGACTCATCCTATTGGCT +
Preference number: 4 (lower is better)
Translates to: VSLLRKQAALSGFCFPACFLNRS*RLILLA
Trigger: AGCCAATAGGATGAGTCTCCAAGACCTATTCAGAAA...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTACCTGTGTTTTTGTGTaGGTCACCATGTTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: VSLLRKQAALSGFCFPACTCVFV*VTMFLQ
Trigger: TTGAAGAAACATGGTGACCCACACAAAAACACAGGT...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp TGTAGCTTCACATTTGTGTTTGCACATTTGAAGAAGCAGTCATCTCTTTTAGTCTCAGTCCCTCAGGCATaGATACCAGTGCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: CSFTFVFAHLKKQSSLLVSVPQA*IPVPGP
Trigger: TGGACCAGGCACTGGTATCCATGCCTGAGGGACTGA...GACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGTTGTTATTTCTCTGCTaGTCTAGCCATCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKLLFLC*SSHPTE
Trigger: CTCTGTTGGATGGCTAGACCAGCAGAGAAATAACAA...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTTCAGAGATTTCTTCTTaGTTTGGATCCATTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VSLLRKQAALSGFCFPACSEISS*FGSIAG
Trigger: ACCAGCAATGGATCCAAACCAAGAAGAAATCTCTGA...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGCTTTCACTTGGATTCTaGAGCTCTCACAAAGGTATT +
Preference number: 4 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKLSLGF*SSHKGI
Trigger: AATACCTTTGTGAGAGCTCCAGAATCCAAGTGAAAG...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATACCTGTGTTTTTGTGTaGGTCACCATGTTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDTCVFV*VTMFLQ
Trigger: TTGAAGAAACATGGTGACCCACACAAAAACACAGGT...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp TGTAGCTTCACATTTGTGTTTGCACATTTGAAGAAGCAGTCATCTCTTTTAGTCAGGTTGCCAGGGAAGTaGTGGAAAGCCAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: CSFTFVFAHLKKQSSLLVRLPGK*WKASSD
Trigger: ATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCT...GACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp AATGAAGTTATGTTCCCATGGGGATTATGGCTGCCTCTGCTGTGTCATACAGGTGGAGTCTATGGTCCTTaGTTGAAGTTTTGTTTAGTG +
Preference number: 4 (lower is better)
Translates to: NEVMFPWGLWLPLLCHTGGVYGP*LKFCLV
Trigger: CACTAAACAAAACTTCAACCAAGGACCATAGACTCC...ACCTGTATGACACAGCAGAGGCAGCCATAATCCCCATGGGAACATAACTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGGGAGTCTATGGTCCTTaGTTGAAGTTTTGTTTAGTG +
Preference number: 4 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKGVYGP*LKFCLV
Trigger: CACTAAACAAAACTTCAACCAAGGACCATAGACTCC...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp TGTAGCTTCACATTTGTGTTTGCACATTTGAAGAAGCAGTCATCTCTTTTAGTCATCCAACAGAGCTTCTaGGCTCTGAGCTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: CSFTFVFAHLKKQSSLLVIQQSF*ALSWYW
Trigger: CCAGTACCAGCTCAGAGCCCAGAAGCTCTGTTGGAT...GACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp TGTAGCTTCACATTTGTGTTTGCACATTTGAAGAAGCAGTCATCTCTTTTAGTCTCTATATGCTGTCTCTaGGCTGGAGCCATGTCCCAA +
Preference number: 4 (lower is better)
Translates to: CSFTFVFAHLKKQSSLLVSICCL*AGAMSQ
Trigger: TTGGGACATGGCTCCAGCTCAGAGACAGCATATAGA...GACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR GCA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGCTTCACATTTGTGTTTaGACATTTGAAGAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKLHICV*TFEEAV
Trigger: GACTGCTTCTTCAAATGTGCAAACACAAATGTGAAG...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTTTTTACTTCTTTCTTTaGAGGCAGAAATTGGGCATA +
Preference number: 4 (lower is better)
Translates to: VSLLRKQAALSGFCFPACFYFFL*RQKLGI
Trigger: TATGCCCAATTTCTGCCTCCAAAGAAAGAAGTAAAA...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CAA 72 bp TCATGGTCCAAGTGTTTATCTAGGAGTCTATGGTCCTaGGTTGAAGTTTTGTTTAGTGTACTAGTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SWSKCLSRSLWS*VEVLFSVLVGL
Trigger: GAGGCCAACTAGTACACTAAACAAAACTTCAACCAAGGACCATAGACTCCTAGATAAACACTTGGACCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CAA 72 bp CATATTACCAGATTTGTTTTTCTGGTTCCTTCTCATTaGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: HITRFVFLVPSH*GRLCQKEDLGL
Trigger: GAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAAATGAGAAGGAACCAGAAAAACAAATCTGGTAATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp TGTAGCTTCACATTTGTGTTTGCACATTTGAAGAAGCAGTCATCTCTTTTAGTCATCCCTTACATAGGGTaGAGGATATTCCTAGTCTCC +
Preference number: 4 (lower is better)
Translates to: CSFTFVFAHLKKQSSLLVIPYIG*RIFLVS
Trigger: GGAGACTAGGAATATCCTTCACCCTATGTAAGGGAT...GACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp TGTAGCTTCACATTTGTGTTTGCACATTTGAAGAAGCAGTCATCTCTTTTAGTCGAATGTCAAATGAATTaGACACCACCTGTCGAGGTC +
Preference number: 4 (lower is better)
Translates to: CSFTFVFAHLKKQSSLLVECQMN*TPPVEV
Trigger: GACCTCGACAGGTGGTGTTCAATTCATTTGACATTC...GACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CCA 90 bp TGTAGCTTCACATTTGTGTTTGCACATTTGAAGAAGCAGTCATCTCTTTTAGTCTGCCCTAAGGTGGCCTaGATAAGTATTCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: CSFTFVFAHLKKQSSLLVCPKVA*ISIPVS
Trigger: AGAAACTGGAATACTTATCCAGGCCACCTTAGGGCA...GACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CAA 72 bp TGGATGAGAGATACAACTGTCGATTCCACCATCTTGTaGACATCACTCCTTTCACCCGTTTTGAAATATCTT +
Preference number: 4 (lower is better)
Translates to: WMRDTTVDSTIL*TSLLSPVLKYL
Trigger: AAGATATTTCAAAACGGGTGAAAGGAGTGATGTCAACAAGATGGTGGAATCGACAGTTGTATCTCTCATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp TGTAGCTTCACATTTGTGTTTGCACATTTGAAGAAGCAGTCATCTCTTTTAGTCCTGTATGTTGGTGGATaGGAGATACAACTGTCGATT +
Preference number: 4 (lower is better)
Translates to: CSFTFVFAHLKKQSSLLVLYVGG*EIQLSI
Trigger: AATCGACAGTTGTATCTCTCATCCACCAACATACAG...GACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CAA 72 bp TGTGTTTCCTGTAGCTTCACATTTGTGTTTGCACATTaGAAGAAGCAGTCATCTCTTTTAGTCTTTACAGGC +
Preference number: 4 (lower is better)
Translates to: CVSCSFTFVFAH*KKQSSLLVFTG
Trigger: GCCTGTAAAGACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACAGGAAACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR TCA 90 bp TGTAGCTTCACATTTGTGTTTGCACATTTGAAGAAGCAGTCATCTCTTTTAGTCTCCTGTTCTACAGGATaGAAACACATTCAGGTCATA +
Preference number: 4 (lower is better)
Translates to: CSFTFVFAHLKKQSSLLVSCSTG*KHIQVI
Trigger: TATGACCTGAATGTGTTTTCATCCTGTAGAACAGGA...GACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CAA 72 bp GAAGCAGTCATCTCTTTTAGTCTTTACAGGCTGGTTTaGATAGGGAAAGTCCAATTTGATAGGAACTGTTTT +
Preference number: 4 (lower is better)
Translates to: EAVISFSLYRLV*IGKVQFDRNCF
Trigger: AAAACAGTTCCTATCAAATTGGACTTTCCCTATCAAAACCAGCCTGTAAAGACTAAAAGAGATGACTGCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CAA 72 bp GGTCACCATGTTTCTTCAAATGATCACTTGAATTCTTaGTCAGGCAGTTCATATTTCTCCATTTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: GHHVSSNDHLNS*SGSSYFSISLM
Trigger: CATCAAAGAAATGGAGAAATATGAACTGCCTGACAAAGAATTCAAGTGATCATTTGAAGAAACATGGTGACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CAA 72 bp TTTTGTGTGGGTCACCATGTTTCTTCAAATGATCACTaGAATTCTTTGTCAGGCAGTTCATATTTCTCCATT +
Preference number: 4 (lower is better)
Translates to: FCVGHHVSSNDH*NSLSGSSYFSI
Trigger: AATGGAGAAATATGAACTGCCTGACAAAGAATTCAAGTGATCATTTGAAGAAACATGGTGACCCACACAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
3UTR CAA 72 bp GGTGTTAAAGAACCTTGTTTTGTCATATTACCAGATTaGTTTTTCTGGTTCCTTCTCATTTGGGTAGACTAT +
Preference number: 4 (lower is better)
Translates to: GVKEPCFVILPD*FFWFLLIWVDY
Trigger: ATAGTCTACCCAAATGAGAAGGAACCAGAAAAACAAATCTGGTAATATGACAAAACAAGGTTCTTTAACACC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp TGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCAAGGGCTACTTATCAGATaGTTTTTGTCCATGGGATCC +
Preference number: 5 (lower is better)
Translates to: WVDGPASGHHAQAHCRVQGLLIR*FLSMGS
Trigger: GGATCCCATGGACAAAAACAATCTGATAAGTAGCCC...TTGCACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp ATGTGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGAGTTTACCTGTGTTTTaGTGTGGGTCACCATGTTTC +
Preference number: 5 (lower is better)
Translates to: MWVDGPASGHHAQAHCRVSLPVF*CGSPCF
Trigger: GAAACATGGTGACCCACACAAAAACACAGGTAAACT...CACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp ATAGGCCTCACCCAGCTCCCATGCTGTCCAAGTGGCCATGTCACTCCCAATGTGCTGCAAGTCTCCCTGTaGAGAAAGCAAGCAGCACTT +
Preference number: 5 (lower is better)
Translates to: IGLTQLPCCPSGHVTPNVLQVSL*RKQAAL
Trigger: AAGTGCTGCTTGCTTTCTCAACAGGGAGACTTGCAG...CACATTGGGAGTGACATGGCCACTTGGACAGCATGGGAGCTGGGTGAGGCCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp CTGTGTCATACAGGTTGCCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGCCTCGCTGTGTCATACAGGTaGCCAGGGAAGTGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: LCHTGCQGSGGKPAVIGLAVSYR*PGKWWK
Trigger: TTTCCACCACTTCCCTGGCAACCTGTATGACACAGC...GAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp ATAGGCCTCACCCAGCTCCCATGCTGTCCAAGTGGCCATGTCACTCCCAATGTGTGGAGACTCATCCTATaGGCTAAAGGTACAGAGCAG +
Preference number: 5 (lower is better)
Translates to: IGLTQLPCCPSGHVTPNVWRLIL*AKGTEQ
Trigger: CTGCTCTGTACCTTTAGCCAATAGGATGAGTCTCCA...CACATTGGGAGTGACATGGCCACTTGGACAGCATGGGAGCTGGGTGAGGCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp ATGTGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGAGGAGTCTATGGTCCTaGGTTGAAGTTTTGTTTAGT +
Preference number: 5 (lower is better)
Translates to: MWVDGPASGHHAQAHCRVRSLWS*VEVLFS
Trigger: ACTAAACAAAACTTCAACCAAGGACCATAGACTCCT...CACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp TGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCAAAGTACATTGAAGAATTaGACCCTGCAACATTCTAGT +
Preference number: 5 (lower is better)
Translates to: WVDGPASGHHAQAHCRVQSTLKN*TLQHSS
Trigger: ACTAGAATGTTGCAGGGTCAAATTCTTCAATGTACT...TTGCACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp CTGTGTCATACAGGTTGCCAGGGAAGTGGTGGAAAGCCAGCAGTGATAGGCCTCGATTCCACCATCTTGTaGACATCACTCCTTTCACCC +
Preference number: 5 (lower is better)
Translates to: LCHTGCQGSGGKPAVIGLDSTIL*TSLLSP
Trigger: GGGTGAAAGGAGTGATGTCAACAAGATGGTGGAATC...GAGGCCTATCACTGCTGGCTTTCCACCACTTCCCTGGCAACCTGTATGACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp ATAGGCCTCACCCAGCTCCCATGCTGTCCAAGTGGCCATGTCACTCCCAATGTGATTGCCTCAGTATTCTaGGTGAGGCATGACAGAAGT +
Preference number: 5 (lower is better)
Translates to: IGLTQLPCCPSGHVTPNVIASVF*VRHDRS
Trigger: ACTTCTGTCATGCCTCACCAAGAATACTGAGGCAAT...CACATTGGGAGTGACATGGCCACTTGGACAGCATGGGAGCTGGGTGAGGCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGAGCTGTGTCATACAGGTaGCCAGGGAAGTGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRAVSYR*PGKWWK
Trigger: TTTCCACCACTTCCCTGGCAACCTGTATGACACAGC...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp TGGGTGGATGGGCCAGCTTCTGGGCACCATGCACAGGCCCACTGTAGGGTGCAAGTCATATTACCAGATTaGTTTTTCTGGTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: WVDGPASGHHAQAHCRVQVILPD*FFWFLL
Trigger: GAGAAGGAACCAGAAAAACAAATCTGGTAATATGAC...TTGCACCCTACAGTGGGCCTGTGCATGGTGCCCAGAAGCTGGCCCATCCACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTCTGCAAGTCTCCCTGTaGAGAAAGCAAGCAGCACTT +
Preference number: 5 (lower is better)
Translates to: SQVVSGTIELPRDYALCLLQVSL*RKQAAL
Trigger: AAGTGCTGCTTGCTTTCTCAACAGGGAGACTTGCAG...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTGATTCCACCATCTTGTaGACATCACTCCTTTCACCC +
Preference number: 5 (lower is better)
Translates to: SQVVSGTIELPRDYALCLDSTIL*TSLLSP
Trigger: GGGTGAAAGGAGTGATGTCAACAAGATGGTGGAATC...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATTGCTGTCTTTCCAAATaGCCCTCATGTCAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDCCLSK*PSCQPL
Trigger: AAGAGGCTGACATGAGGGCAATTTGGAAAGACAGCA...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp GGGCTGAAAACTTGTTCCAGGCTGCAAGTCTCCCTGTTGAGAAAGCAAGCAGCAGTCTATGGTCCTTGGTaGAAGTTTTGTTTAGTGTAC +
Preference number: 5 (lower is better)
Translates to: GLKTCSRLQVSLLRKQAAVYGPW*KFCLVY
Trigger: GTACACTAAACAAAACTTCAACCAAGGACCATAGAC...TGCTGCTTGCTTTCTCAACAGGGAGACTTGCAGCCTGGAACAAGTTTTCAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTCTTTACAGGCTGGTTTaGATAGGGAAAGTCCAATTT +
Preference number: 5 (lower is better)
Translates to: SQVVSGTIELPRDYALCLLYRLV*IGKVQF
Trigger: AAATTGGACTTTCCCTATCAAAACCAGCCTGTAAAG...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTTTTGTTCCTTTGGCTTaGCTAAGTTTCCTTGATTCC +
Preference number: 5 (lower is better)
Translates to: SQVVSGTIELPRDYALCLFVPLA*LSFLDS
Trigger: GGAATCAAGGAAACTTAGCAAAGCCAAAGGAACAAA...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTTCCTTGGTTGAAGTTTaGTTTAGTGTACTAGTTGGC +
Preference number: 5 (lower is better)
Translates to: SQVVSGTIELPRDYALCLSLVEV*FSVLVG
Trigger: GCCAACTAGTACACTAAACAAAACTTCAACCAAGGA...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp TTGGGTAGACTATGTCAGAAGGAAGATCTGGGGCTCAAGGGCTACTTATCAGATGGGCTACTTATCAGATaGTTTTTGTCCATGGGATCC +
Preference number: 5 (lower is better)
Translates to: LGRLCQKEDLGLKGYLSDGLLIR*FLSMGS
Trigger: GGATCCCATGGACAAAAACAATCTGATAAGTAGCCC...ATCTGATAAGTAGCCCTTGAGCCCCAGATCTTCCTTCTGACATAGTCTACCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp GAGCAATTCCTGTCCCTTTTAAGGGCTCACAACTCTAAGGGGGTCTGCGTGAGATTTTTACTTCTTTCTTaGGAGGCAGAAATTGGGCAT +
Preference number: 5 (lower is better)
Translates to: EQFLSLLRAHNSKGVCVRFLLLS*EAEIGH
Trigger: ATGCCCAATTTCTGCCTCCAAAGAAAGAAGTAAAAA...TCTCACGCAGACCCCCTTAGAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGAGTTTACCTGTGTTTTaGTGTGGGTCACCATGTTTC +
Preference number: 5 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKSLPVF*CGSPCF
Trigger: GAAACATGGTGACCCACACAAAAACACAGGTAAACT...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTTCCTTGGTTGAAGTTTaGTTTAGTGTACTAGTTGGC +
Preference number: 5 (lower is better)
Translates to: VSLLRKQAALSGFCFPACSLVEV*FSVLVG
Trigger: GCCAACTAGTACACTAAACAAAACTTCAACCAAGGA...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp TCTCAGGTGGTGAGTGGGACCATAGAGCTCCCAAGAGATTATGCCCTTTGTCTTGTCATATTACCAGATTaGTTTTTCTGGTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: SQVVSGTIELPRDYALCLVILPD*FFWFLL
Trigger: GAGAAGGAACCAGAAAAACAAATCTGGTAATATGAC...AAGACAAAGGGCATAATCTCTTGGGAGCTCTATGGTCCCACTCACCACCTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS TCA 90 bp TTTCAGGCTATTGATGCCCCAATGAGATTTGTGGGATATGAGAACTaGGTCTTGGATCCTAGATTCATGAAGAAACGGGATGAACAGGGA +
Preference number: 5 (lower is better)
Translates to: FQAIDAPMRFVGYEN*VLDPRFMKKRDEQG
Trigger: TCCCTGTTCATCCCGTTTCTTCATGAATCTAGGATCCAAGACTCAGTTCTCATATCCCACAAATCTCATTGGGGCATCAATAGCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTAGTACATTGAAGAATTaGACCCTGCAACATTCTAGT +
Preference number: 5 (lower is better)
Translates to: VSLLRKQAALSGFCFPACSTLKN*TLQHSS
Trigger: ACTAGAATGTTGCAGGGTCAAATTCTTCAATGTACT...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGAGGAGTCTATGGTCCTaGGTTGAAGTTTTGTTTAGT +
Preference number: 5 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKRSLWS*VEVLFS
Trigger: ACTAAACAAAACTTCAACCAAGGACCATAGACTCCT...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp GTCTCCCTGTTGAGAAAGCAAGCAGCACTTTCAGGTTTCTGTTTTCCTGCCTGTTTTTTACTTCTTTCTTaGGAGGCAGAAATTGGGCAT +
Preference number: 5 (lower is better)
Translates to: VSLLRKQAALSGFCFPACFLLLS*EAEIGH
Trigger: ATGCCCAATTTCTGCCTCCAAAGAAAGAAGTAAAAA...ACAGGCAGGAAAACAGAAACCTGAAAGTGCTGCTTGCTTTCTCAACAGGGAGAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS GCA 90 bp GTGAAGGATATTCCTAGTCTCCACTTTAATGCTGTCTTTCCAAATTaGCCTCATGTCAGCCTCTTAAAGTGTTTATCTAGGAGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: VKDIPSLHFNAVFPN*PHVSLLKCLSRSLP
Trigger: GGGAAGACTCCTAGATAAACACTTTAAGAGGCTGACATGAGGGCAATTTGGAAAGACAGCATTAAAGTGGAGACTAGGAATATCCTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGTTTGTGTTTGCACATTaGAAGAAGCAGTCATCTCTT +
Preference number: 5 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKFVFAH*KKQSSL
Trigger: AAGAGATGACTGCTTCTTCAAATGTGCAAACACAAA...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp GAAGTTTTGTTTAGTGTACTAGTTGGCCTCCAGCCAAGAGGTGGTCCTTTCAAGTCTTCAAATGATCACTaGAATTCTTTGTCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: EVLFSVLVGLQPRGGPFKSSNDH*NSLSGS
Trigger: ACTGCCTGACAAAGAATTCAAGTGATCATTTGAAGA...CTTGAAAGGACCACCTCTTGGCTGGAGGCCAACTAGTACACTAAACAAAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp TGTAGCTTCACATTTGTGTTTGCACATTTGAAGAAGCAGTCATCTCTTTTAGTCTGGAGACTCATCCTATaGGCTAAAGGTACAGAGCAG +
Preference number: 5 (lower is better)
Translates to: CSFTFVFAHLKKQSSLLVWRLIL*AKGTEQ
Trigger: CTGCTCTGTACCTTTAGCCAATAGGATGAGTCTCCA...GACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp TGTAGCTTCACATTTGTGTTTGCACATTTGAAGAAGCAGTCATCTCTTTTAGTCATTGCCTCAGTATTCTaGGTGAGGCATGACAGAAGT +
Preference number: 5 (lower is better)
Translates to: CSFTFVFAHLKKQSSLLVIASVF*VRHDRS
Trigger: ACTTCTGTCATGCCTCACCAAGAATACTGAGGCAAT...GACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp TGTAGCTTCACATTTGTGTTTGCACATTTGAAGAAGCAGTCATCTCTTTTAGTCCTTTACAGGCTGGTTTaGATAGGGAAAGTCCAATTT +
Preference number: 5 (lower is better)
Translates to: CSFTFVFAHLKKQSSLLVLYRLV*IGKVQF
Trigger: AAATTGGACTTTCCCTATCAAAACCAGCCTGTAAAG...GACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp TGTAGCTTCACATTTGTGTTTGCACATTTGAAGAAGCAGTCATCTCTTTTAGTCTTTGTTCCTTTGGCTTaGCTAAGTTTCCTTGATTCC +
Preference number: 5 (lower is better)
Translates to: CSFTFVFAHLKKQSSLLVFVPLA*LSFLDS
Trigger: GGAATCAAGGAAACTTAGCAAAGCCAAAGGAACAAA...GACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp TGTAGCTTCACATTTGTGTTTGCACATTTGAAGAAGCAGTCATCTCTTTTAGTCGTCTATGGTCCTTGGTaGAAGTTTTGTTTAGTGTAC +
Preference number: 5 (lower is better)
Translates to: CSFTFVFAHLKKQSSLLVVYGPW*KFCLVY
Trigger: GTACACTAAACAAAACTTCAACCAAGGACCATAGAC...GACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS-3UTR CAA 90 bp TGTAGCTTCACATTTGTGTTTGCACATTTGAAGAAGCAGTCATCTCTTTTAGTCTCTTCAAATGATCACTaGAATTCTTTGTCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: CSFTFVFAHLKKQSSLLVSSNDH*NSLSGS
Trigger: ACTGCCTGACAAAGAATTCAAGTGATCATTTGAAGA...GACTAAAAGAGATGACTGCTTCTTCAAATGTGCAAACACAAATGTGAAGCTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS TCA 72 bp TGGGATATGAGAACTGAGTCTTGGATCCTAGATTCATaGAGAAACGGGATGAACAGGGAGCACATCAGGTCT +
Preference number: 6 (lower is better)
Translates to: WDMRTESWILDS*RNGMNREHIRS
Trigger: AGACCTGATGTGCTCCCTGTTCATCCCGTTTCTTCATGAATCTAGGATCCAAGACTCAGTTCTCATATCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1
CDS TCA 72 bp ATTGATGCCCCAATGAGATTTGTGGGATATGAGAACTaGGTCTTGGATCCTAGATTCATGAAGAAACGGGAT +
Preference number: 6 (lower is better)
Translates to: IDAPMRFVGYEN*VLDPRFMKKRD
Trigger: ATCCCGTTTCTTCATGAATCTAGGATCCAAGACTCAGTTCTCATATCCCACAAATCTCATTGGGGCATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641064.1
ENST00000641833.1