Pregenerated sensors for OR1C1 (Homo sapiens)
Ensembl gene IDs: ENSG00000221888Ensembl transcript IDs: ENST00000408896.4, ENST00000641256.1
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGAGATCAGTTAGCCTCTGCCCTATAAAGATGGCTGGGAGATTCTaGGTTCCTCCATGCCTGAGATCAGTTAGGGACACACATGACAAG | + |
|
Preference number: 1 (lower is better) Translates to: GRSVSLCPIKMAGRF*VPPCLRSVRDTHDK Trigger: CTTGTCATGTGTGTCCCTAACTGATCTCAGGCATGGAGGAACTCAGAATCTCCCAGCCATCTTTATAGGGCAGAGGCTAACTGATCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| 3UTR CCA 90 bp | ATCTCTTCTCTAAAGATATTGTATACCCAAAGCACTCCTAGTTGTTaGGGGAGATCAGTTAGCCTCTGCCCTATAAAGATGGCTGGGAGA | + |
|
Preference number: 1 (lower is better) Translates to: ISSLKILYTQSTPSC*GRSVSLCPIKMAGR Trigger: TCTCCCAGCCATCTTTATAGGGCAGAGGCTAACTGATCTCCCCCAACAACTAGGAGTGCTTTGGGTATACAATATCTTTAGAGAAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| 3UTR CCA 90 bp | GGGAACTATATCACAGAGATTCTCATCACTAAGGTATATTTGTACTaGAGTCAGAAACTATTTATCAGCTATGGGTTGTATGCAGACTAT | + |
|
Preference number: 1 (lower is better) Translates to: GNYITEILITKVYLY*SQKLFISYGLYADY Trigger: ATAGTCTGCATACAACCCATAGCTGATAAATAGTTTCTGACTCCAGTACAAATATACCTTAGTGATGAGAATCTCTGTGATATAGTTCCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| 3UTR-3UTR TCA 90 bp | GTGGTTTTAGAACAACTGAATATCCATATGGAGATGAATGGAATTGGACCCTTAGTAGGCTGCCCAACCTaGAACTGGCCTGGGGGATAT | + |
|
Preference number: 2 (lower is better) Translates to: VVLEQLNIHMEMNGIGPLVGCPT*NWPGGY Trigger: ATATCCCCCAGGCCAGTTTCAGGTTGGGCAGCCTAC...TAAGGGTCCAATTCCATTCATCTCCATATGGATATTCAGTTGTTCTAAAACCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| 3UTR-3UTR TCA 90 bp | GTGGTTTTAGAACAACTGAATATCCATATGGAGATGAATGGAATTGGACCCTTAGAGTTCCTCCATGCCTaGGATCAGTTAGGGACACAC | + |
|
Preference number: 2 (lower is better) Translates to: VVLEQLNIHMEMNGIGPLEFLHA*DQLGTH Trigger: GTGTGTCCCTAACTGATCTCAGGCATGGAGGAACTC...TAAGGGTCCAATTCCATTCATCTCCATATGGATATTCAGTTGTTCTAAAACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| 3UTR-3UTR TCA 90 bp | GTGGTTTTAGAACAACTGAATATCCATATGGAGATGAATGGAATTGGACCCTTAATGGCTGGGAGATTCTaGGTTCCTCCATGCCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: VVLEQLNIHMEMNGIGPLMAGRF*VPPCLR Trigger: TCTCAGGCATGGAGGAACTCAGAATCTCCCAGCCAT...TAAGGGTCCAATTCCATTCATCTCCATATGGATATTCAGTTGTTCTAAAACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| 3UTR-3UTR GCA 90 bp | CTAGCAGTGTCCTGCACCGAAACTTCTAAGCTTAAACAGTTTTCTACACCTACAATTCAGGGGTACATGTaGAGATTTGCACAGGTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: LAVSCTETSKLKQFSTPTIQGYM*RFAQVN Trigger: ATTTACCTGTGCAAATCTGCACATGTACCCCTGAAT...TGTAGGTGTAGAAAACTGTTTAAGCTTAGAAGTTTCGGTGCAGGACACTGCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| 3UTR-3UTR GCA 90 bp | GTGGTTTTAGAACAACTGAATATCCATATGGAGATGAATGGAATTGGACCCTTAACCCTAGCAGTGTCCTaGACCGAAACTTCTAAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: VVLEQLNIHMEMNGIGPLTLAVS*TETSKL Trigger: AAGCTTAGAAGTTTCGGTGCAGGACACTGCTAGGGT...TAAGGGTCCAATTCCATTCATCTCCATATGGATATTCAGTTGTTCTAAAACCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| 3UTR-3UTR TCA 90 bp | GTGGTTTTAGAACAACTGAATATCCATATGGAGATGAATGGAATTGGACCCTTAATCATTGACTGTATTTaGAGTGAGAGGGGATTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: VVLEQLNIHMEMNGIGPLIIDCI*SERGLE Trigger: CTCCAATCCCCTCTCACTTCAAATACAGTCAATGAT...TAAGGGTCCAATTCCATTCATCTCCATATGGATATTCAGTTGTTCTAAAACCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| 3UTR CAA 90 bp | GCATTTGGGAACTATATCACAGAGATTCTCATCACTAAGGTATATTaGTACTGGAGTCAGAAACTATTTATCAGCTATGGGTTGTATGCA | + |
|
Preference number: 2 (lower is better) Translates to: AFGNYITEILITKVY*YWSQKLFISYGLYA Trigger: TGCATACAACCCATAGCTGATAAATAGTTTCTGACTCCAGTACAAATATACCTTAGTGATGAGAATCTCTGTGATATAGTTCCCAAATGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| 3UTR TCA 72 bp | GTTAGCCTCTGCCCTATAAAGATGGCTGGGAGATTCTaGGTTCCTCCATGCCTGAGATCAGTTAGGGACACA | + |
|
Preference number: 3 (lower is better) Translates to: VSLCPIKMAGRF*VPPCLRSVRDT Trigger: TGTGTCCCTAACTGATCTCAGGCATGGAGGAACTCAGAATCTCCCAGCCATCTTTATAGGGCAGAGGCTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| 3UTR CCA 72 bp | CTAAAGATATTGTATACCCAAAGCACTCCTAGTTGTTaGGGGAGATCAGTTAGCCTCTGCCCTATAAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: LKILYTQSTPSC*GRSVSLCPIKM Trigger: CATCTTTATAGGGCAGAGGCTAACTGATCTCCCCCAACAACTAGGAGTGCTTTGGGTATACAATATCTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTTTTAGAACAACTGAATATCCATATGGAGATGAATGGAATTGGACCCTTATATGTATGTATGTATTaGGTCTTCCTTGAGAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VVLEQLNIHMEMNGIGPLYVCMY*VFLEKG Trigger: CCCTTTCTCAAGGAAGACCAAATACATACATACATA...TAAGGGTCCAATTCCATTCATCTCCATATGGATATTCAGTTGTTCTAAAACCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| 3UTR CCA 72 bp | ATCACAGAGATTCTCATCACTAAGGTATATTTGTACTaGAGTCAGAAACTATTTATCAGCTATGGGTTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: ITEILITKVYLY*SQKLFISYGLY Trigger: ATACAACCCATAGCTGATAAATAGTTTCTGACTCCAGTACAAATATACCTTAGTGATGAGAATCTCTGTGAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR GCA 90 bp | CTAGCAGTGTCCTGCACCGAAACTTCTAAGCTTAAACAGTTTTCTACACCTACAGACAGGAGGTGCTGCTaGTCTGCTGAGCTAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LAVSCTETSKLKQFSTPTDRRCC*SAELGS Trigger: ACTTCCTAGCTCAGCAGAGCAGCAGCACCTCCTGTC...TGTAGGTGTAGAAAACTGTTTAAGCTTAGAAGTTTCGGTGCAGGACACTGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | GGTTTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACAAACAACACCACCACTaGCAGGTGGCAGCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GFSSHCYCEHLVTLSYHHKQHHH*QVAAAG Trigger: ACCTGCAGCTGCCACCTGTCAGTGGTGGTGTTGTTT...GTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR GCA 90 bp | CTAGCAGTGTCCTGCACCGAAACTTCTAAGCTTAAACAGTTTTCTACACCTACAAGACGGCGATGGCTGTaGCGTAAAACAACACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LAVSCTETSKLKQFSTPTRRRWL*RKTTPP Trigger: TGGTGGTGTTGTTTTACGGCACAGCCATCGCCGTCT...TGTAGGTGTAGAAAACTGTTTAAGCTTAGAAGTTTCGGTGCAGGACACTGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | CTAGCAGTGTCCTGCACCGAAACTTCTAAGCTTAAACAGTTTTCTACACCTACAATAGGGGAATGGAGGTaGGAGTCAAAGCCAATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LAVSCTETSKLKQFSTPTIGEWR*ESKPIV Trigger: GACGATTGGCTTTGACTCTCACCTCCATTCCCCTAT...TGTAGGTGTAGAAAACTGTTTAAGCTTAGAAGTTTCGGTGCAGGACACTGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | GGTTTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACTACAGACAAGGGGCGTaGGAGCCAATAGACCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GFSSHCYCEHLVTLSYHHYRQGA*EPIDLL Trigger: TAGGAGGTCTATTGGCTCTCACGCCCCTTGTCTGTA...GTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | GGTTTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACGCTCTCTGCTTGCCCTaGGTAGAGGTGATCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GFSSHCYCEHLVTLSYHHALCLP*VEVIFR Trigger: TCTGAAGATCACCTCTACTCAGGGCAAGCAGAGAGC...GTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | GGTTTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACGAGTTCCTCCATGCCTaGGATCAGTTAGGGACACAC | + |
|
Preference number: 4 (lower is better) Translates to: GFSSHCYCEHLVTLSYHHEFLHA*DQLGTH Trigger: GTGTGTCCCTAACTGATCTCAGGCATGGAGGAACTC...GTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | CTAGCAGTGTCCTGCACCGAAACTTCTAAGCTTAAACAGTTTTCTACACCTACAGGCCTGGGGGATATTTaGAAGCCTAACATGGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAVSCTETSKLKQFSTPTGLGDI*KPNMDG Trigger: ACCATCCATGTTAGGCTTTCAAATATCCCCCAGGCC...TGTAGGTGTAGAAAACTGTTTAAGCTTAGAAGTTTCGGTGCAGGACACTGCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR GCA 90 bp | GGTTTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACAGACGGCGATGGCTGTaGCGTAAAACAACACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GFSSHCYCEHLVTLSYHHRRRWL*RKTTPP Trigger: TGGTGGTGTTGTTTTACGGCACAGCCATCGCCGTCT...GTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR CCA 90 bp | TCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTGGTGGCAGCTGCAGGTaGAAACAGCTCTCTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSHCYCEHLVTLSYHHISGGSCR*KQLSAC Trigger: GCAAGCAGAGAGCTGTTTCCACCTGCAGCTGCCACC...ACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR CCA 90 bp | GGTTTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACTCGCTCTCAGGCATATaGGGGGATGAAGGGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GFSSHCYCEHLVTLSYHHSLSGI*GDEGLK Trigger: TTTCAGCCCTTCATCCCCCCATATGCCTGAGAGCGA...GTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | TCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTAAACAACACCACCACTaGCAGGTGGCAGCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSHCYCEHLVTLSYHHISKQHHH*QVAAAG Trigger: ACCTGCAGCTGCCACCTGTCAGTGGTGGTGTTGTTT...ACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | CATATGGAGATGAATGGAATTGGACCCTTATCTGACACCATATACAAAAATCAAGTAGGCTGCCCAACCTaGAACTGGCCTGGGGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: HMEMNGIGPLSDTIYKNQVGCPT*NWPGGY Trigger: ATATCCCCCAGGCCAGTTTCAGGTTGGGCAGCCTAC...TTGATTTTTGTATATGGTGTCAGATAAGGGTCCAATTCCATTCATCTCCATATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR GCA 90 bp | TTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTGACAGGAGGTGCTGCTaGTCTGCTGAGCTAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSSHCYCEHLVTLSYHHIDRRCC*SAELGS Trigger: ACTTCCTAGCTCAGCAGAGCAGCAGCACCTCCTGTC...AATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR GCA 90 bp | TCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTACAGACAGGAGGTGCTaGTGCTCTGCTGAGCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSHCYCEHLVTLSYHHISTDRRC*CSAELG Trigger: TCCTAGCTCAGCAGAGCAGCAGCACCTCCTGTCTGT...ACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR GCA 90 bp | TCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTAGCACAGACAGGAGGTaGTGCTGCTCTGCTGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SSHCYCEHLVTLSYHHISSTDRR*CCSAEL Trigger: TAGCTCAGCAGAGCAGCAGCACCTCCTGTCTGTGCT...ACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR GCA 90 bp | TTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGCACAGACAGGAGGTaGTGCTGCTCTGCTGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FSSHCYCEHLVTLSYHHISTDRR*CCSAEL Trigger: TAGCTCAGCAGAGCAGCAGCACCTCCTGTCTGTGCT...AATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR CCA 90 bp | GGTTTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACGGCACAGGTTCATTCTaGCGGTGTAATGTAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GFSSHCYCEHLVTLSYHHGTGSF*RCNVRG Trigger: ACCCCTTACATTACACCGCCAGAATGAACCTGTGCC...GTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR CCA 90 bp | TCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTATTGGTGGCAGCTGCAGGTaGAAACAGCTCTCTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SHCYCEHLVTLSYHHISIGGSCR*KQLSAC Trigger: GCAAGCAGAGAGCTGTTTCCACCTGCAGCTGCCACC...AATACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | TTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTTACAGACAAGGGGCGTaGGAGCCAATAGACCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: FSSHCYCEHLVTLSYHHIYRQGA*EPIDLL Trigger: TAGGAGGTCTATTGGCTCTCACGCCCCTTGTCTGTA...AATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | CTAGCAGTGTCCTGCACCGAAACTTCTAAGCTTAAACAGTTTTCTACACCTACAGGTCATTATTGCTGCTaGAAGACTGTGCACTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAVSCTETSKLKQFSTPTGHYCC*KTVHLR Trigger: TCTCAAGTGCACAGTCTTTCAGCAGCAATAATGACC...TGTAGGTGTAGAAAACTGTTTAAGCTTAGAAGTTTCGGTGCAGGACACTGCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | TCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTATGGCTGGGAGATTCTaGGTTCCTCCATGCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSHCYCEHLVTLSYHHISMAGRF*VPPCLR Trigger: TCTCAGGCATGGAGGAACTCAGAATCTCCCAGCCAT...ACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR GCA 90 bp | TCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTGTGTGTGTGTGTGTGTaGATGCGTGCGCAGGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSHCYCEHLVTLSYHHISVCVCV*MRAQVS Trigger: ACTTACCTGCGCACGCATGCACACACACACACACAC...ACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408896.4 |
||
| CDS-3UTR CCA 90 bp | TCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTAGTCCAGCCACTAGCTaGACACAAAGGCACAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSHCYCEHLVTLSYHHISSPATS*TQRHRF Trigger: GAACCTGTGCCTTTGTGTCCAGCTAGTGGCTGGACT...ACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR CCA 90 bp | GTGGTTTTAGAACAACTGAATATCCATATGGAGATGAATGGAATTGGACCCTTATCGCTCTCAGGCATATaGGGGGATGAAGGGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VVLEQLNIHMEMNGIGPLSLSGI*GDEGLK Trigger: TTTCAGCCCTTCATCCCCCCATATGCCTGAGAGCGA...TAAGGGTCCAATTCCATTCATCTCCATATGGATATTCAGTTGTTCTAAAACCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | TCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTATAGGGGAATGGAGGTaGGAGTCAAAGCCAATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSHCYCEHLVTLSYHHISIGEWR*ESKPIV Trigger: GACGATTGGCTTTGACTCTCACCTCCATTCCCCTAT...ACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | CTAGCAGTGTCCTGCACCGAAACTTCTAAGCTTAAACAGTTTTCTACACCTACATTGAGAAGCATTTTCTaGAGTCCCCTCTTCATATCC | + |
|
Preference number: 4 (lower is better) Translates to: LAVSCTETSKLKQFSTPTLRSIF*SPLFIS Trigger: GGATATGAAGAGGGGACTTCAGAAAATGCTTCTCAA...TGTAGGTGTAGAAAACTGTTTAAGCTTAGAAGTTTCGGTGCAGGACACTGCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR CCA 90 bp | GGTTTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACGCATGTTCCCCAAGGTaGTGGCTAAATACATACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GFSSHCYCEHLVTLSYHHACSPR*WLNTYR Trigger: TCTGTATGTATTTAGCCACCACCTTGGGGAACATGC...GTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR CCA 90 bp | TCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTATTAGTCCAGCCACTAGCTaGACACAAAGGCACAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SHCYCEHLVTLSYHHISISPATS*TQRHRF Trigger: GAACCTGTGCCTTTGTGTCCAGCTAGTGGCTGGACT...AATACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | GGTTTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACGAAAGACTGTGCACTTaGGAAGCATTTTCTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GFSSHCYCEHLVTLSYHHERLCT*EAFSEV Trigger: GACTTCAGAAAATGCTTCTCAAGTGCACAGTCTTTC...GTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR GCA 90 bp | GGTTTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACTTCCTTGAGAAAGGGTaGACGTGTGTGTTTATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GFSSHCYCEHLVTLSYHHFLEKG*TCVFIR Trigger: CCTTATAAACACACACGTGCACCCTTTCTCAAGGAA...GTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAAACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR CCA 90 bp | TTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTCCCTATAAAGATGGCTaGGAGATTCTGAGTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSSHCYCEHLVTLSYHHIPYKDG*EILSSS Trigger: GGAGGAACTCAGAATCTCCCAGCCATCTTTATAGGG...AATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR CCA 90 bp | TCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTATTAGCACTCCTAGTTGTTaGGGGAGATCAGTTAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SHCYCEHLVTLSYHHISISTPSC*GRSVSL Trigger: GAGGCTAACTGATCTCCCCCAACAACTAGGAGTGCT...AATACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | TTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTGGTCATTATTGCTGCTaGAAGACTGTGCACTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSSHCYCEHLVTLSYHHIGHYCC*KTVHLR Trigger: TCTCAAGTGCACAGTCTTTCAGCAGCAATAATGACC...AATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | GGTTTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACTATGAAAAATGCAGCTaGGAACCTGATCTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GFSSHCYCEHLVTLSYHHYEKCS*EPDLFS Trigger: AGAGAAGAGATCAGGTTCTCAGCTGCATTTTTCATA...GTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | CTAGCAGTGTCCTGCACCGAAACTTCTAAGCTTAAACAGTTTTCTACACCTACAATATCCATATGGAGATaGATGGAATTGGACCCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LAVSCTETSKLKQFSTPTISIWR*MELDPY Trigger: ATAAGGGTCCAATTCCATTCATCTCCATATGGATAT...TGTAGGTGTAGAAAACTGTTTAAGCTTAGAAGTTTCGGTGCAGGACACTGCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | CTAGCAGTGTCCTGCACCGAAACTTCTAAGCTTAAACAGTTTTCTACACCTACAACATTCATGGTCAATTaGTCTTTGACAAAGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LAVSCTETSKLKQFSTPTTFMVN*SLTKVV Trigger: TACCACCTTTGTCAAAGATCAATTGACCATGAATGT...TGTAGGTGTAGAAAACTGTTTAAGCTTAGAAGTTTCGGTGCAGGACACTGCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR GCA 90 bp | GGTTTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACAGTAGCATCCAAACTTaGTTGCTTGAATGCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GFSSHCYCEHLVTLSYHHSSIQT*LLECFP Trigger: TGGAAAGCATTCAAGCAAGCAAGTTTGGATGCTACT...GTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408896.4 |
||
| CDS-3UTR GCA 90 bp | TCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTATTAGATCAGTTAGCCTCTaGCCTATAAAGATGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHCYCEHLVTLSYHHISIRSVSL*PIKMAG Trigger: CCCAGCCATCTTTATAGGGCAGAGGCTAACTGATCT...AATACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR GCA 90 bp | TCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTATTACCCTAGCAGTGTCCTaGACCGAAACTTCTAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SHCYCEHLVTLSYHHISITLAVS*TETSKL Trigger: AAGCTTAGAAGTTTCGGTGCAGGACACTGCTAGGGT...AATACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | TTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTTTGAGAAGCATTTTCTaGAGTCCCCTCTTCATATCC | + |
|
Preference number: 4 (lower is better) Translates to: FSSHCYCEHLVTLSYHHILRSIF*SPLFIS Trigger: GGATATGAAGAGGGGACTTCAGAAAATGCTTCTCAA...AATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | TCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTGAAAGACTGTGCACTTaGGAAGCATTTTCTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSHCYCEHLVTLSYHHISERLCT*EAFSEV Trigger: GACTTCAGAAAATGCTTCTCAAGTGCACAGTCTTTC...ACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | TTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTGACCTTTGCCACCTATaGCTTTTCTCTTTCCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FSSHCYCEHLVTLSYHHIDLCHL*LFSFLN Trigger: ATTCAGGAAAGAGAAAAGTCATAGGTGGCAAAGGTC...AATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR CCA 90 bp | TCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTTGTTCCCCAAGGTGGTaGCTAAATACATACAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSHCYCEHLVTLSYHHISCSPRW*LNTYRE Trigger: TTCTCTGTATGTATTTAGCCACCACCTTGGGGAACA...ACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR CCA 90 bp | TTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTTGTTCCCCAAGGTGGTaGCTAAATACATACAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSSHCYCEHLVTLSYHHICSPRW*LNTYRE Trigger: TTCTCTGTATGTATTTAGCCACCACCTTGGGGAACA...AATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR CCA 90 bp | CATATGGAGATGAATGGAATTGGACCCTTATCTGACACCATATACAAAAATCAAGCATGTTCCCCAAGGTaGTGGCTAAATACATACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HMEMNGIGPLSDTIYKNQACSPR*WLNTYR Trigger: TCTGTATGTATTTAGCCACCACCTTGGGGAACATGC...TTGATTTTTGTATATGGTGTCAGATAAGGGTCCAATTCCATTCATCTCCATATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| 3UTR CAA 72 bp | GATTCAGGGGTACATGTGCAGATTTGCACAGGTAAATaGCATGTCACAGGAGTTTGGTATACATATTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: DSGVHVQICTGK*HVTGVWYTYYF Trigger: GAAATAATATGTATACCAAACTCCTGTGACATGCAATTTACCTGTGCAAATCTGCACATGTACCCCTGAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | TCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTAACTTCTTTCAAGACTaGCTTCTTCCCCCAAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSHCYCEHLVTLSYHHISNFFQD*LLPPKE Trigger: TTCTTTTGGGGGAAGAAGTCAGTCTTGAAAGAAGTT...ACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408896.4 |
||
| CDS-3UTR TCA 90 bp | TCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTGAAGGACGAATTCCCTaGCAACTGTTAGATTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSHCYCEHLVTLSYHHISEGRIP*QLLDFF Trigger: AAAGAAATCTAACAGTTGTCAGGGAATTCGTCCTTC...ACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | GTGGTTTTAGAACAACTGAATATCCATATGGAGATGAATGGAATTGGACCCTTATTCTCACTGTTATTGTaGGCATCTAGTCACACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVLEQLNIHMEMNGIGPLFSLLL*ASSHTF Trigger: GAAAGTGTGACTAGATGCTCACAATAACAGTGAGAA...TAAGGGTCCAATTCCATTCATCTCCATATGGATATTCAGTTGTTCTAAAACCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | TCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTGATGGACCTATGCATTaGTTCAGATTTCTAGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSHCYCEHLVTLSYHHISDGPMH*FRFLVK Trigger: CTTGACTAGAAATCTGAATCAATGCATAGGTCCATC...ACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR GCA 90 bp | TCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTATTCAGGGGTACATGTaGAGATTTGCACAGGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSHCYCEHLVTLSYHHISIQGYM*RFAQVN Trigger: ATTTACCTGTGCAAATCTGCACATGTACCCCTGAAT...ACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | CATATGGAGATGAATGGAATTGGACCCTTATCTGACACCATATACAAAAATCAAGAAGGACGAATTCCCTaGCAACTGTTAGATTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HMEMNGIGPLSDTIYKNQEGRIP*QLLDFF Trigger: AAAGAAATCTAACAGTTGTCAGGGAATTCGTCCTTC...TTGATTTTTGTATATGGTGTCAGATAAGGGTCCAATTCCATTCATCTCCATATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | TCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTATTTTCTCACTGTTATTGTaGGCATCTAGTCACACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SHCYCEHLVTLSYHHISIFSLLL*ASSHTF Trigger: GAAAGTGTGACTAGATGCTCACAATAACAGTGAGAA...AATACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR TCA 90 bp | GTGGTTTTAGAACAACTGAATATCCATATGGAGATGAATGGAATTGGACCCTTAAACAGAATGAAGAGATaGCCTACAAAATGGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VVLEQLNIHMEMNGIGPLNRMKR*PTKWEK Trigger: TTTCTCCCATTTTGTAGGTCATCTCTTCATTCTGTT...TAAGGGTCCAATTCCATTCATCTCCATATGGATATTCAGTTGTTCTAAAACCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR GCA 90 bp | TTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTACTTGCTTGCTTGAATaGTTTCCAATGACATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSSHCYCEHLVTLSYHHITCLLE*FPMTSC Trigger: ACAAGATGTCATTGGAAAGCATTCAAGCAAGCAAGT...AATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408896.4 |
||
| CDS-3UTR GCA 90 bp | CATATGGAGATGAATGGAATTGGACCCTTATCTGACACCATATACAAAAATCAATTTGCACAGGTAAATTaGATGTCACAGGAGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HMEMNGIGPLSDTIYKNQFAQVN*MSQEFG Trigger: ACCAAACTCCTGTGACATGCAATTTACCTGTGCAAA...TTGATTTTTGTATATGGTGTCAGATAAGGGTCCAATTCCATTCATCTCCATATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR CCA 90 bp | TTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTTCACAAAAGCATAGATaGACCTATGCATTGATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSSHCYCEHLVTLSYHHISQKHR*TYALIQ Trigger: CTGAATCAATGCATAGGTCCATCTATGCTTTTGTGA...AATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR CCA 90 bp | TCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTATTTCCAGCAATCACTATTaGGTATACATCCAAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SHCYCEHLVTLSYHHISISSNHY*VYIQEK Trigger: TTTCTCTTGGATGTATACCCAATAGTGATTGCTGGA...AATACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| 3UTR CAA 72 bp | TTGTACTGGAGTCAGAAACTATTTATCAGCTATGGGTaGTATGCAGACTATTTAACTTCCCTAAGATTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LYWSQKLFISYG*YADYLTSLRFT Trigger: AGTGAATCTTAGGGAAGTTAAATAGTCTGCATACAACCCATAGCTGATAAATAGTTTCTGACTCCAGTACAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| 3UTR CAA 72 bp | AACTATATCACAGAGATTCTCATCACTAAGGTATATTaGTACTGGAGTCAGAAACTATTTATCAGCTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: NYITEILITKVY*YWSQKLFISYG Trigger: CCCATAGCTGATAAATAGTTTCTGACTCCAGTACAAATATACCTTAGTGATGAGAATCTCTGTGATATAGTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS GCA 90 bp | TGTGTGTGTGTGTGCATGCGTGCGCAGGTAAGTAGCATCCAAACTTaGTTGCTTGAATGCTTTCCAATGACATCTTGTGTTCATGATATT | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCMRAQVSSIQT*LLECFPMTSCVHDI Trigger: AATATCATGAACACAAGATGTCATTGGAAAGCATTCAAGCAAGCAAGTTTGGATGCTACTTACCTGCGCACGCATGCACACACACACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408896.4 |
||
| CDS-3UTR CAA 90 bp | GGTTTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACTCACTGAGGTCATTATaGCTGCTGAAAGACTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GFSSHCYCEHLVTLSYHHSLRSL*LLKDCA Trigger: TGCACAGTCTTTCAGCAGCAATAATGACCTCAGTGA...GTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR CAA 90 bp | CTAGCAGTGTCCTGCACCGAAACTTCTAAGCTTAAACAGTTTTCTACACCTACAATAAAACCCAAGGGATaGGGCATGAGGCTTTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LAVSCTETSKLKQFSTPTIKPKG*GMRLCF Trigger: AAAACAAAGCCTCATGCCCAATCCCTTGGGTTTTAT...TGTAGGTGTAGAAAACTGTTTAAGCTTAGAAGTTTCGGTGCAGGACACTGCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR CAA 90 bp | GGTTTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACAGCATCCAAACTTGCTaGCTTGAATGCTTTCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: GFSSHCYCEHLVTLSYHHSIQTC*LECFPM Trigger: CATTGGAAAGCATTCAAGCAAGCAAGTTTGGATGCT...GTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAAACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408896.4 |
||
| CDS-3UTR CAA 90 bp | TTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTGATATTCACTACCATTaGGGGGACTGTAGTCGACGT | + |
|
Preference number: 5 (lower is better) Translates to: FSSHCYCEHLVTLSYHHIDIHYH*GDCSRR Trigger: ACGTCGACTACAGTCCCCCAAATGGTAGTGAATATC...AATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR CAA 90 bp | GTGGTTTTAGAACAACTGAATATCCATATGGAGATGAATGGAATTGGACCCTTAGATATTCACTACCATTaGGGGGACTGTAGTCGACGT | + |
|
Preference number: 5 (lower is better) Translates to: VVLEQLNIHMEMNGIGPLDIHYH*GDCSRR Trigger: ACGTCGACTACAGTCCCCCAAATGGTAGTGAATATC...TAAGGGTCCAATTCCATTCATCTCCATATGGATATTCAGTTGTTCTAAAACCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR CAA 90 bp | TCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTTGTATTTGGTCTTCCTaGAGAAAGGGTGCACGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSHCYCEHLVTLSYHHISCIWSS*RKGARV Trigger: CACACGTGCACCCTTTCTCAAGGAAGACCAAATACA...ACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR CAA 90 bp | TTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTCCTTTTCTGAGACCTTaGCCACCTATGACTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FSSHCYCEHLVTLSYHHIPFLRP*PPMTFL Trigger: GAGAAAAGTCATAGGTGGCAAAGGTCTCAGAAAAGG...AATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR CAA 90 bp | CATATGGAGATGAATGGAATTGGACCCTTATCTGACACCATATACAAAAATCAATCACTGAGGTCATTATaGCTGCTGAAAGACTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HMEMNGIGPLSDTIYKNQSLRSL*LLKDCA Trigger: TGCACAGTCTTTCAGCAGCAATAATGACCTCAGTGA...TTGATTTTTGTATATGGTGTCAGATAAGGGTCCAATTCCATTCATCTCCATATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR CAA 90 bp | GGTTTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACTACATTCATGGTCAATaGATCTTTGACAAAGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GFSSHCYCEHLVTLSYHHYIHGQ*IFDKGG Trigger: ACCACCTTTGTCAAAGATCAATTGACCATGAATGTA...GTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAAACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR CAA 90 bp | TTCTCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAAAATGATCATTACATaGAAGGAGACGTCAGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: FSSHCYCEHLVTLSYHHIKMIIT*KETSEQ Trigger: TTGCTCTGACGTCTCCTTCAATGTAATGATCATTTT...AATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000408896.4 ENST00000641256.1 |
||
| CDS-3UTR CAA 90 bp | GTGGTTTTAGAACAACTGAATATCCATATGGAGATGAATGGAATTGGACCCTTAAAAATGATCATTACATaGAAGGAGACGTCAGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VVLEQLNIHMEMNGIGPLKMIIT*KETSEQ Trigger: TTGCTCTGACGTCTCCTTCAATGTAATGATCATTTT...TAAGGGTCCAATTCCATTCATCTCCATATGGATATTCAGTTGTTCTAAAACCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS-3UTR CAA 90 bp | TCTTCTCACTGTTATTGTGAGCATCTAGTCACACTTTCTTATCACCACATTAGTAGATGGACCTATGCATaGATTCAGATTTCTAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SSHCYCEHLVTLSYHHISRWTYA*IQISSQ Trigger: TTGACTAGAAATCTGAATCAATGCATAGGTCCATCT...ACTAATGTGGTGATAAGAAAGTGTGACTAGATGCTCACAATAACAGTGAGAAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS CCA 72 bp | TTCTCTTTCCTGAATATCCAATCACAAAAGCATAGATaGACCTATGCATTGATTCAGATTTCTAGTCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: FSFLNIQSQKHR*TYALIQISSQE Trigger: CTCTTGACTAGAAATCTGAATCAATGCATAGGTCCATCTATGCTTTTGTGATTGGATATTCAGGAAAGAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||
| CDS TCA 72 bp | ATATCCAATCACAAAAGCATAGATGGACCTATGCATTaGTTCAGATTTCTAGTCAAGAGTGAAAAAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ISNHKSIDGPMH*FRFLVKSEKEK Trigger: CTTCTCTTTTTCACTCTTGACTAGAAATCTGAATCAATGCATAGGTCCATCTATGCTTTTGTGATTGGATAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641256.1 |
||