Pregenerated sensors for OR1B1 (Homo sapiens)
Ensembl gene IDs: ENSG00000280094Ensembl transcript IDs: ENST00000623530.1
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCAGTCCAGCAAAGAGGCAGGACGAGTCCCACACGCAACATGGTGTaGAGTATGGACACCACCCAGCTCAAGGCTAGTAAGCAGGCACAC | + |
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Preference number: 5 (lower is better) Translates to: PVQQRGRTSPTRNMV*SMDTTQLKASKQAH Trigger: GTGTGCCTGCTTACTAGCCTTGAGCTGGGTGGTGTCCATACTGCACACCATGTTGCGTGTGGGACTCGTCCTGCCTCTTTGCTGGACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623530.1 |
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| CDS CCA 90 bp | AGCAAAGAGGCAGGACGAGTCCCACACGCAACATGGTGTGCAGTATaGACACCACCCAGCTCAAGGCTAGTAAGCAGGCACACCGTTGGT | + |
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Preference number: 5 (lower is better) Translates to: SKEAGRVPHATWCAV*TPPSSRLVSRHTVG Trigger: ACCAACGGTGTGCCTGCTTACTAGCCTTGAGCTGGGTGGTGTCCATACTGCACACCATGTTGCGTGTGGGACTCGTCCTGCCTCTTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623530.1 |
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| CDS CCA 90 bp | ATGCATAGAAGAAAAAGAACTGAGCCAAGCAGCGGGCAGCAGGAATaGTTGGGTAATGAGAGACCAAATGGGCCAGCAACTGGGGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: MHRRKRTEPSSGQQE*LGNERPNGPATGAV Trigger: CACTGCCCCAGTTGCTGGCCCATTTGGTCTCTCATTACCCAACCATTCCTGCTGCCCGCTGCTTGGCTCAGTTCTTTTTCTTCTATGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623530.1 |
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| CDS CCA 90 bp | GGCCAGCTCATTAGAATGTATGTCAGAACAAGAGGCTCGCAGAAGTaGCCGGTGGTCACAAAAGAAGTGAGGAAGGTTAACGTTGCCCCC | + |
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Preference number: 5 (lower is better) Translates to: GQLIRMYVRTRGSQK*PVVTKEVRKVNVAP Trigger: GGGGGCAACGTTAACCTTCCTCACTTCTTTTGTGACCACCGGCCACTTCTGCGAGCCTCTTGTTCTGACATACATTCTAATGAGCTGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623530.1 |
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| CDS CCA 90 bp | ATAGAAGAAAAAGAACTGAGCCAAGCAGCGGGCAGCAGGAATGGTTaGGTAATGAGAGACCAAATGGGCCAGCAACTGGGGCAGTGTAAC | + |
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Preference number: 5 (lower is better) Translates to: IEEKELSQAAGSRNG*VMRDQMGQQLGQCN Trigger: GTTACACTGCCCCAGTTGCTGGCCCATTTGGTCTCTCATTACCCAACCATTCCTGCTGCCCGCTGCTTGGCTCAGTTCTTTTTCTTCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623530.1 |
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| CDS TCA 90 bp | ATACACAAATGGGTTGGCCAAAGGTGTAATGGCAGTATACATTACTaGAGCCACCATGTCCTGATACTGAGAGTTCTGGAAGGGAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: IHKWVGQRCNGSIHY*SHHVLILRVLEGRL Trigger: CAGCCTCCCTTCCAGAACTCTCAGTATCAGGACATGGTGGCTTCAGTAATGTATACTGCCATTACACCTTTGGCCAACCCATTTGTGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623530.1 |
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| CDS CCA 72 bp | GCAGGACGAGTCCCACACGCAACATGGTGTGCAGTATaGACACCACCCAGCTCAAGGCTAGTAAGCAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: AGRVPHATWCAV*TPPSSRLVSRH Trigger: GTGCCTGCTTACTAGCCTTGAGCTGGGTGGTGTCCATACTGCACACCATGTTGCGTGTGGGACTCGTCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623530.1 |
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| CDS CCA 72 bp | TCCAGCAAAGAGGCAGGACGAGTCCCACACGCAACATaGTGTGCAGTATGGACACCACCCAGCTCAAGGCTA | + |
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Preference number: 6 (lower is better) Translates to: SSKEAGRVPHAT*CAVWTPPSSRL Trigger: TAGCCTTGAGCTGGGTGGTGTCCATACTGCACACCATGTTGCGTGTGGGACTCGTCCTGCCTCTTTGCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623530.1 |
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| CDS GCA 72 bp | CAAAGAGGCAGGACGAGTCCCACACGCAACATGGTGTaGAGTATGGACACCACCCAGCTCAAGGCTAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: QRGRTSPTRNMV*SMDTTQLKASK Trigger: CTTACTAGCCTTGAGCTGGGTGGTGTCCATACTGCACACCATGTTGCGTGTGGGACTCGTCCTGCCTCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623530.1 |
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| CDS CCA 72 bp | AAAGAACTGAGCCAAGCAGCGGGCAGCAGGAATGGTTaGGTAATGAGAGACCAAATGGGCCAGCAACTGGGG | + |
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Preference number: 6 (lower is better) Translates to: KELSQAAGSRNG*VMRDQMGQQLG Trigger: CCCCAGTTGCTGGCCCATTTGGTCTCTCATTACCCAACCATTCCTGCTGCCCGCTGCTTGGCTCAGTTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623530.1 |
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| CDS GCA 72 bp | GGGGTCTACCTTCACCCATTCAAGCAGCCTGCAGAGTaGACCCTTGACATCCTTATTGTGGAGGCTATACAC | + |
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Preference number: 6 (lower is better) Translates to: GVYLHPFKQPAE*TLDILIVEAIH Trigger: GTGTATAGCCTCCACAATAAGGATGTCAAGGGTGCACTCTGCAGGCTGCTTGAATGGGTGAAGGTAGACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623530.1 |
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| CDS CAA 90 bp | AGTGCACCCTTGACATCCTTATTGTGGAGGCTATACACAAATGGGTaGGCCAAAGGTGTAATGGCAGTATACATTACTGAAGCCACCATG | + |
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Preference number: 6 (lower is better) Translates to: SAPLTSLLWRLYTNG*AKGVMAVYITEATM Trigger: CATGGTGGCTTCAGTAATGTATACTGCCATTACACCTTTGGCCAACCCATTTGTGTATAGCCTCCACAATAAGGATGTCAAGGGTGCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623530.1 |
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| CDS CCA 72 bp | ATTAGAATGTATGTCAGAACAAGAGGCTCGCAGAAGTaGCCGGTGGTCACAAAAGAAGTGAGGAAGGTTAAC | + |
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Preference number: 6 (lower is better) Translates to: IRMYVRTRGSQK*PVVTKEVRKVN Trigger: GTTAACCTTCCTCACTTCTTTTGTGACCACCGGCCACTTCTGCGAGCCTCTTGTTCTGACATACATTCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623530.1 |
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