Pregenerated sensors for OR13J1 (Homo sapiens)
Ensembl gene IDs: ENSG00000168828Ensembl transcript IDs: ENST00000377981.3, ENST00000377981.4
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGGGGGCTGTTCTGTGGCAGGATCAGCGGGACTTGGTGCTGCCTTaGTGGGATGAAGATACCAGACCTGTAGCCCCAGCCCTGCCATGT | + |
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Preference number: 1 (lower is better) Translates to: LGAVLWQDQRDLVLP*WDEDTRPVAPALPC Trigger: ACATGGCAGGGCTGGGGCTACAGGTCTGGTATCTTCATCCCAGCAAGGCAGCACCAAGTCCCGCTGATCCTGCCACAGAACAGCCCCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377981.3 |
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| 3UTR CCA 90 bp | GGGGCTGTTCTGTGGCAGGATCAGCGGGACTTGGTGCTGCCTTGCTaGGATGAAGATACCAGACCTGTAGCCCCAGCCCTGCCATGTCTT | + |
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Preference number: 1 (lower is better) Translates to: GAVLWQDQRDLVLPC*DEDTRPVAPALPCL Trigger: AAGACATGGCAGGGCTGGGGCTACAGGTCTGGTATCTTCATCCCAGCAAGGCAGCACCAAGTCCCGCTGATCCTGCCACAGAACAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377981.3 |
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| 3UTR CCA 90 bp | GCCAGGGTGATGCTGAGAGCAGAGGGTGATTTGGGGGCTGTTCTGTaGCAGGATCAGCGGGACTTGGTGCTGCCTTGCTGGGATGAAGAT | + |
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Preference number: 1 (lower is better) Translates to: ARVMLRAEGDLGAVL*QDQRDLVLPCWDED Trigger: ATCTTCATCCCAGCAAGGCAGCACCAAGTCCCGCTGATCCTGCCACAGAACAGCCCCCAAATCACCCTCTGCTCTCAGCATCACCCTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377981.3 |
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| 3UTR CCA 90 bp | GATGAAGATACCAGACCTGTAGCCCCAGCCCTGCCATGTCTTCACTaGCATTGGCATACGATGGCCTCAGCTACTAACCTGAGACCTGCG | + |
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Preference number: 1 (lower is better) Translates to: DEDTRPVAPALPCLH*HWHTMASATNLRPA Trigger: CGCAGGTCTCAGGTTAGTAGCTGAGGCCATCGTATGCCAATGCCAGTGAAGACATGGCAGGGCTGGGGCTACAGGTCTGGTATCTTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377981.3 |
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| 3UTR CAA 90 bp | GCAGAGGGTGATTTGGGGGCTGTTCTGTGGCAGGATCAGCGGGACTaGGTGCTGCCTTGCTGGGATGAAGATACCAGACCTGTAGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: AEGDLGAVLWQDQRD*VLPCWDEDTRPVAP Trigger: TGGGGCTACAGGTCTGGTATCTTCATCCCAGCAAGGCAGCACCAAGTCCCGCTGATCCTGCCACAGAACAGCCCCCAAATCACCCTCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377981.3 |
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| 3UTR-3UTR CCA 90 bp | CGGGACTTGGTGCTGCCTTGCTGGGATGAAGATACCAGACCTGTAGCCCCAGCCCTGCCATGTCTTCACTaGCATTGGCATACGATGGCC | + |
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Preference number: 2 (lower is better) Translates to: RDLVLPCWDEDTRPVAPALPCLH*HWHTMA Trigger: GGCCATCGTATGCCAATGCCAGTGAAGACATGGCAG...GGCTGGGGCTACAGGTCTGGTATCTTCATCCCAGCAAGGCAGCACCAAGTCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377981.3 |
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| 3UTR-3UTR TCA 90 bp | GACTTGGTGCTGCCTTGCTGGGATGAAGATACCAGACCTGTAGCCCCAGCCCTGCCTCAGCTACTAACCTaGGACCTGCGTCTGTACAGA | + |
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Preference number: 2 (lower is better) Translates to: DLVLPCWDEDTRPVAPALPQLLT*DLRLYR Trigger: TCTGTACAGACGCAGGTCTCAGGTTAGTAGCTGAGG...CAGGGCTGGGGCTACAGGTCTGGTATCTTCATCCCAGCAAGGCAGCACCAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377981.3 |
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| 3UTR TCA 72 bp | GCAGGATCAGCGGGACTTGGTGCTGCCTTGCTGGGATaGAGATACCAGACCTGTAGCCCCAGCCCTGCCATG | + |
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Preference number: 3 (lower is better) Translates to: AGSAGLGAALLG*RYQTCSPSPAM Trigger: CATGGCAGGGCTGGGGCTACAGGTCTGGTATCTTCATCCCAGCAAGGCAGCACCAAGTCCCGCTGATCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377981.3 |
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| 3UTR GCA 72 bp | GTTCTGTGGCAGGATCAGCGGGACTTGGTGCTGCCTTaGTGGGATGAAGATACCAGACCTGTAGCCCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: VLWQDQRDLVLP*WDEDTRPVAPA Trigger: GGCTGGGGCTACAGGTCTGGTATCTTCATCCCAGCAAGGCAGCACCAAGTCCCGCTGATCCTGCCACAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377981.3 |
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| 3UTR CCA 72 bp | ATGCTGAGAGCAGAGGGTGATTTGGGGGCTGTTCTGTaGCAGGATCAGCGGGACTTGGTGCTGCCTTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: MLRAEGDLGAVL*QDQRDLVLPCW Trigger: CCAGCAAGGCAGCACCAAGTCCCGCTGATCCTGCCACAGAACAGCCCCCAAATCACCCTCTGCTCTCAGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377981.3 |
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| 3UTR CCA 72 bp | ATTTGGGGGCTGTTCTGTGGCAGGATCAGCGGGACTTaGTGCTGCCTTGCTGGGATGAAGATACCAGACCTG | + |
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Preference number: 3 (lower is better) Translates to: IWGLFCGRISGT*CCLAGMKIPDL Trigger: CAGGTCTGGTATCTTCATCCCAGCAAGGCAGCACCAAGTCCCGCTGATCCTGCCACAGAACAGCCCCCAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377981.3 |
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| 3UTR-3UTR CAA 90 bp | CAGGATCAGCGGGACTTGGTGCTGCCTTGCTGGGATGAAGATACCAGACCTGTAATGTCTTCACTGGCATaGGCATACGATGGCCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: QDQRDLVLPCWDEDTRPVMSSLA*AYDGLS Trigger: GCTGAGGCCATCGTATGCCAATGCCAGTGAAGACAT...TACAGGTCTGGTATCTTCATCCCAGCAAGGCAGCACCAAGTCCCGCTGATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377981.3 |
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| 3UTR CAA 72 bp | GTGAAGGCCAGGGTGATGCTGAGAGCAGAGGGTGATTaGGGGGCTGTTCTGTGGCAGGATCAGCGGGACTTG | + |
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Preference number: 4 (lower is better) Translates to: VKARVMLRAEGD*GAVLWQDQRDL Trigger: CAAGTCCCGCTGATCCTGCCACAGAACAGCCCCCAAATCACCCTCTGCTCTCAGCATCACCCTGGCCTTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377981.3 |
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| 3UTR CAA 72 bp | GATTTGGGGGCTGTTCTGTGGCAGGATCAGCGGGACTaGGTGCTGCCTTGCTGGGATGAAGATACCAGACCT | + |
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Preference number: 4 (lower is better) Translates to: DLGAVLWQDQRD*VLPCWDEDTRP Trigger: AGGTCTGGTATCTTCATCCCAGCAAGGCAGCACCAAGTCCCGCTGATCCTGCCACAGAACAGCCCCCAAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377981.3 |
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| CDS CAA 72 bp | GAGCCCGCCAGCAGGAAGTCTTCGCTGACCGACGTGTaGCCGCATGCCAGCTTCAGCACTGCCAGGATCTTG | + |
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Preference number: 6 (lower is better) Translates to: EPASRKSSLTDV*PHASFSTARIL Trigger: CAAGATCCTGGCAGTGCTGAAGCTGGCATGCGGCAACACGTCGGTCAGCGAAGACTTCCTGCTGGCGGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377981.4 |
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