RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR13A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000256574

Ensembl transcript IDs: ENST00000374401.3, ENST00000536058.1, ENST00000553795.6, ENST00000612185.1, ENST00000615770.1, ENST00000616267.4

Found 301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp CTCCTAGGCCCTGTGTTTCTCTGCCAACTCAGCACTGACACCACCTaGGAGTCAGACCAAGAGATCTGGTGTCTCAGAGGCTGGTGGGTC +
Preference number: 2 (lower is better)
Translates to: LLGPVFLCQLSTDTT*ESDQEIWCLRGWWV
Trigger: GACCCACCAGCCTCTGAGACACCAGATCTCTTGGTCTGACTCCAAGGTGGTGTCAGTGCTGAGTTGGCAGAGAAACACAGGGCCTAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR CCA 90 bp AGCTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTGTCTCAGAGGCTGGTaGGTCACACCTACCGCAATC +
Preference number: 2 (lower is better)
Translates to: SFSLTTLQGLWGPQFCLTCLRGW*VTPTAI
Trigger: GATTGCGGTAGGTGTGACCCACCAGCCTCTGAGACA...AGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR CCA 90 bp AGCTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTGCACTGACACCACCTTaGAGTCAGACCAAGAGATCT +
Preference number: 2 (lower is better)
Translates to: SFSLTTLQGLWGPQFCLTALTPP*SQTKRS
Trigger: AGATCTCTTGGTCTGACTCCAAGGTGGTGTCAGTGC...AGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR CCA 90 bp TGGAGCACAAGCACAAGACCTGTCTTTATTAGACACAGAGGATTCGTTCACCCATGGTGTCTCAGAGGCTaGTGGGTCACACCTACCGCA +
Preference number: 2 (lower is better)
Translates to: WSTSTRPVFIRHRGFVHPWCLRG*WVTPTA
Trigger: TGCGGTAGGTGTGACCCACCAGCCTCTGAGACACCA...TGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGGTCTTGTGCTTGTGCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR GCA 90 bp TGGAGCACAAGCACAAGACCTGTCTTTATTAGACACAGAGGATTCGTTCACCCACTCCCAGCTCATCCATaGACAGGTTCTGCTGGGTTA +
Preference number: 2 (lower is better)
Translates to: WSTSTRPVFIRHRGFVHPLPAHP*TGSAGL
Trigger: TAACCCAGCAGAACCTGTGCATGGATGAGCTGGGAG...TGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGGTCTTGTGCTTGTGCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR TCA 90 bp AGCTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTTAGACCCACACAGCTaGATTCTAGGTGTGATTTTA +
Preference number: 2 (lower is better)
Translates to: SFSLTTLQGLWGPQFCLTLDPHS*ILGVIL
Trigger: TAAAATCACACCTAGAATTCAGCTGTGTGGGTCTAA...AGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR CCA 90 bp TGGAGCACAAGCACAAGACCTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGCACTGACACCACCTTaGAGTCAGACCAAGAGATCT +
Preference number: 2 (lower is better)
Translates to: WSTSTRPVFIRHRGFVHPALTPP*SQTKRS
Trigger: AGATCTCTTGGTCTGACTCCAAGGTGGTGTCAGTGC...TGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGGTCTTGTGCTTGTGCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR TCA 90 bp CTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTTTGTTTGATGTGGCTATaGGTTGAAAACACAAGGAAC +
Preference number: 2 (lower is better)
Translates to: LQSDNPSGAVGSTILPNFCLMWL*VENTRN
Trigger: GTTCCTTGTGTTTTCAACTCATAGCCACATCAAACA...AAAGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR GCA 90 bp GATTTTCCAGTGCAGTTTTGTAATAGCATGGAGCACAAGCACAAGACCTGTCTTCTCCCAGCTCATCCATaGACAGGTTCTGCTGGGTTA +
Preference number: 2 (lower is better)
Translates to: DFPVQFCNSMEHKHKTCLLPAHP*TGSAGL
Trigger: TAACCCAGCAGAACCTGTGCATGGATGAGCTGGGAG...AAGACAGGTCTTGTGCTTGTGCTCCATGCTATTACAAAACTGCACTGGAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374401.3
3UTR-3UTR GCA 90 bp TTGGAAAGTGAGACCACTGAGGGTTTCAACATGTTATTTGGGACTCAGAATTCAGGCCCTGTGTTTCTCTaGCAACTCAGCACTGACACC +
Preference number: 2 (lower is better)
Translates to: LESETTEGFNMLFGTQNSGPVFL*QLSTDT
Trigger: GGTGTCAGTGCTGAGTTGGCAGAGAAACACAGGGCC...TGAATTCTGAGTCCCAAATAACATGTTGAAACCCTCAGTGGTCTCACTTTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374401.3
3UTR-3UTR CCA 90 bp CCTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGTGGTGTCTCAGAGGCTaGTGGGTCACACCTACCGCA +
Preference number: 2 (lower is better)
Translates to: PVFIRHRGFVHPVLSETMWCLRG*WVTPTA
Trigger: TGCGGTAGGTGTGACCCACCAGCCTCTGAGACACCA...CATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR GCA 90 bp CCTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGCTCCCAGCTCATCCATaGACAGGTTCTGCTGGGTTA +
Preference number: 2 (lower is better)
Translates to: PVFIRHRGFVHPVLSETMLPAHP*TGSAGL
Trigger: TAACCCAGCAGAACCTGTGCATGGATGAGCTGGGAG...CATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR CCA 90 bp CTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGGTCAGACCAAGAGATCTaGTGTCTCAGAGGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: LSLLDTEDSFTQFYLKQWSDQEI*CLRGWW
Trigger: CCACCAGCCTCTGAGACACCAGATCTCTTGGTCTGA...CCATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR CCA 90 bp TGGAGCACAAGCACAAGACCTGTCTTTATTAGACACAGAGGATTCGTTCACCCATTTTTGAAGTCCAAGTaGCTCCAGAGGAAACAGTTG +
Preference number: 2 (lower is better)
Translates to: WSTSTRPVFIRHRGFVHPFLKSK*LQRKQL
Trigger: CAACTGTTTCCTCTGGAGCCACTTGGACTTCAAAAA...TGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGGTCTTGTGCTTGTGCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR CCA 90 bp CCTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGATTAGAGCTGACTCATaGCAGCTGTCCTCGCTCCAG +
Preference number: 2 (lower is better)
Translates to: PVFIRHRGFVHPVLSETMIRADS*QLSSLQ
Trigger: CTGGAGCGAGGACAGCTGCCATGAGTCAGCTCTAAT...CATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR TCA 90 bp TATCTGAAACAATGGAAGGATAGCAATGCCTTACTACAATGCCGTTTAACTTATCTGCCAACTCAGCACTaGCACCACCTTGGAGTCAGA +
Preference number: 2 (lower is better)
Translates to: YLKQWKDSNALLQCRLTYLPTQH*HHLGVR
Trigger: TCTGACTCCAAGGTGGTGTCAGTGCTGAGTTGGCAG...ATAAGTTAAACGGCATTGTAGTAAGGCATTGCTATCCTTCCATTGTTTCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR TCA 90 bp TGGAGCACAAGCACAAGACCTGTCTTTATTAGACACAGAGGATTCGTTCACCCATTAGACCCACACAGCTaGATTCTAGGTGTGATTTTA +
Preference number: 2 (lower is better)
Translates to: WSTSTRPVFIRHRGFVHPLDPHS*ILGVIL
Trigger: TAAAATCACACCTAGAATTCAGCTGTGTGGGTCTAA...TGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGGTCTTGTGCTTGTGCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR CCA 90 bp TATCTGAAACAATGGAAGGATAGCAATGCCTTACTACAATGCCGTTTAACTTATTGTCTCAGAGGCTGGTaGGTCACACCTACCGCAATC +
Preference number: 2 (lower is better)
Translates to: YLKQWKDSNALLQCRLTYCLRGW*VTPTAI
Trigger: GATTGCGGTAGGTGTGACCCACCAGCCTCTGAGACA...ATAAGTTAAACGGCATTGTAGTAAGGCATTGCTATCCTTCCATTGTTTCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR CCA 90 bp CTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGGGCACTGACACCACCTTaGAGTCAGACCAAGAGATCT +
Preference number: 2 (lower is better)
Translates to: LSLLDTEDSFTQFYLKQWALTPP*SQTKRS
Trigger: AGATCTCTTGGTCTGACTCCAAGGTGGTGTCAGTGC...CCATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR CCA 90 bp CCTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGGCACTGACACCACCTTaGAGTCAGACCAAGAGATCT +
Preference number: 2 (lower is better)
Translates to: PVFIRHRGFVHPVLSETMALTPP*SQTKRS
Trigger: AGATCTCTTGGTCTGACTCCAAGGTGGTGTCAGTGC...CATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR TCA 90 bp TATCTGAAACAATGGAAGGATAGCAATGCCTTACTACAATGCCGTTTAACTTATAACAAAGCTTCAGTCTaGCAACCCTTCAGGGGCTGT +
Preference number: 2 (lower is better)
Translates to: YLKQWKDSNALLQCRLTYNKASV*QPFRGC
Trigger: ACAGCCCCTGAAGGGTTGTCAGACTGAAGCTTTGTT...ATAAGTTAAACGGCATTGTAGTAAGGCATTGCTATCCTTCCATTGTTTCAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR TCA 90 bp TTGGAAAGTGAGACCACTGAGGGTTTCAACATGTTATTTGGGACTCAGAATTCAAAATCAAACTATTTTTaGAGTCCAAGTGGCTCCAGA +
Preference number: 2 (lower is better)
Translates to: LESETTEGFNMLFGTQNSKSNYF*SPSGSR
Trigger: TCTGGAGCCACTTGGACTTCAAAAATAGTTTGATTT...TGAATTCTGAGTCCCAAATAACATGTTGAAACCCTCAGTGGTCTCACTTTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374401.3
3UTR-3UTR GCA 90 bp TATCTGAAACAATGGAAGGATAGCAATGCCTTACTACAATGCCGTTTAACTTATCCCAGTCCAGAAACTTaGTCATCAGACTCCACTAAA +
Preference number: 2 (lower is better)
Translates to: YLKQWKDSNALLQCRLTYPSPET*SSDSTK
Trigger: TTTAGTGGAGTCTGATGAGCAAGTTTCTGGACTGGG...ATAAGTTAAACGGCATTGTAGTAAGGCATTGCTATCCTTCCATTGTTTCAGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR CCA 90 bp TATCTGAAACAATGGAAGGATAGCAATGCCTTACTACAATGCCGTTTAACTTATTTTTTGAAGTCCAAGTaGCTCCAGAGGAAACAGTTG +
Preference number: 2 (lower is better)
Translates to: YLKQWKDSNALLQCRLTYFLKSK*LQRKQL
Trigger: CAACTGTTTCCTCTGGAGCCACTTGGACTTCAAAAA...ATAAGTTAAACGGCATTGTAGTAAGGCATTGCTATCCTTCCATTGTTTCAGATA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR CAA 90 bp CATGTTTATTGGAAAGTGAGACCACTGAGGGTTTCAACATGTTATTaGGGACTCAGAATTCACTTAGAAGAGATTAAACTGTCTGTAAGA +
Preference number: 2 (lower is better)
Translates to: HVYWKVRPLRVSTCY*GLRIHLEEIKLSVR
Trigger: TCTTACAGACAGTTTAATCTCTTCTAAGTGAATTCTGAGTCCCAAATAACATGTTGAAACCCTCAGTGGTCTCACTTTCCAATAAACATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374401.3
3UTR-3UTR TCA 90 bp TATCTGAAACAATGGAAGGATAGCAATGCCTTACTACAATGCCGTTTAACTTATTGTTTGATGTGGCTATaGGTTGAAAACACAAGGAAC +
Preference number: 2 (lower is better)
Translates to: YLKQWKDSNALLQCRLTYCLMWL*VENTRN
Trigger: GTTCCTTGTGTTTTCAACTCATAGCCACATCAAACA...ATAAGTTAAACGGCATTGTAGTAAGGCATTGCTATCCTTCCATTGTTTCAGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR CCA 72 bp CTGTGTTTCTCTGCCAACTCAGCACTGACACCACCTTaGAGTCAGACCAAGAGATCTGGTGTCTCAGAGGCT +
Preference number: 3 (lower is better)
Translates to: LCFSANSALTPP*SQTKRSGVSEA
Trigger: AGCCTCTGAGACACCAGATCTCTTGGTCTGACTCCAAGGTGGTGTCAGTGCTGAGTTGGCAGAGAAACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR-3UTR CAA 90 bp CTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTTAGCACTGACACCACCTaGGAGTCAGACCAAGAGATC +
Preference number: 3 (lower is better)
Translates to: LQSDNPSGAVGSTILPNFSTDTT*ESDQEI
Trigger: GATCTCTTGGTCTGACTCCAAGGTGGTGTCAGTGCT...AAAGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp AGCTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTGTGGATGGCCGTGTTaGCGGCGCAGAGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: SFSLTTLQGLWGPQFCLTCGWPC*RRRAAT
Trigger: TGTGGCTGCTCTGCGCCGTCAACACGGCCATCCACA...AGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp AGCTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTAGCATCAGCCCCGTGTaGATGGCCGTGTTGACGGCG +
Preference number: 4 (lower is better)
Translates to: SFSLTTLQGLWGPQFCLTSISPV*MAVLTA
Trigger: CGCCGTCAACACGGCCATCCACACGGGGCTGATGCT...AGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp CTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTTGAGGAGCAGCAGCTCTaGGGATGCAGCCCACGTGAG +
Preference number: 4 (lower is better)
Translates to: LQSDNPSGAVGSTILPNFEEQQL*GCSPRE
Trigger: CTCACGTGGGCTGCATCCTCAGAGCTGCTGCTCCTC...AAAGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp CTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTTGCAGGCCAGCCAACTTaGTCTTCCCTGCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: LQSDNPSGAVGSTILPNFAGQPT*SSLRCS
Trigger: GCTACAGCGCAGGGAAGAGCAAGTTGGCTGGCCTGC...AAAGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp AGCTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTCTGCCAACTCAGCACTaGCACCACCTTGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: SFSLTTLQGLWGPQFCLTLPTQH*HHLGVR
Trigger: TCTGACTCCAAGGTGGTGTCAGTGCTGAGTTGGCAG...AGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp AGCTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTCAGAGCCACTTATTGTaGTTGGGTGGGGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: SFSLTTLQGLWGPQFCLTQSHLL*LGGDRR
Trigger: CCTCCTGTCCCCACCCAATCACAATAAGTGGCTCTG...AGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp CTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTTCTGCCAACTCAGCACTaGCACCACCTTGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: LQSDNPSGAVGSTILPNFLPTQH*HHLGVR
Trigger: TCTGACTCCAAGGTGGTGTCAGTGCTGAGTTGGCAG...AAAGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp CTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTTCCTTGCTCATCATGCTaGTGTAATGCAGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LQSDNPSGAVGSTILPNFPCSSC*CNAAGG
Trigger: GCCACCCGCTGCATTACAGCAGCATGATGAGCAAGG...AAAGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp AGCTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTAAGTACATAGGAGCGTaGAGCCCAGGGTTGAACGTG +
Preference number: 4 (lower is better)
Translates to: SFSLTTLQGLWGPQFCLTKYIGA*SPGLNV
Trigger: CACGTTCAACCCTGGGCTCCACGCTCCTATGTACTT...AGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TGGAGCACAAGCACAAGACCTGTCTTTATTAGACACAGAGGATTCGTTCACCCAAGCATCAGCCCCGTGTaGATGGCCGTGTTGACGGCG +
Preference number: 4 (lower is better)
Translates to: WSTSTRPVFIRHRGFVHPSISPV*MAVLTA
Trigger: CGCCGTCAACACGGCCATCCACACGGGGCTGATGCT...TGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGGTCTTGTGCTTGTGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp AGCTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTCAGACCAAGAGATCTaGTGTCTCAGAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SFSLTTLQGLWGPQFCLTSDQEI*CLRGWW
Trigger: CCACCAGCCTCTGAGACACCAGATCTCTTGGTCTGA...AGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp AGCTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTAAAAGCCCTGCAGGATaGACTCGGTTACCAACGTCT +
Preference number: 4 (lower is better)
Translates to: SFSLTTLQGLWGPQFCLTKSPAG*TRLPTS
Trigger: AGACGTTGGTAACCGAGTTCATCCTGCAGGGCTTTT...AGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp CTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTTCTCCCAGCTCATCCATaGACAGGTTCTGCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: LQSDNPSGAVGSTILPNFLPAHP*TGSAGL
Trigger: TAACCCAGCAGAACCTGTGCATGGATGAGCTGGGAG...AAAGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTTTCATCATCCTTGGGCTaGGACGGGTTTCTGGGACTA +
Preference number: 4 (lower is better)
Translates to: LQSDNPSGAVGSTILPNFSSSLG*DGFLGL
Trigger: TAGTCCCAGAAACCCGTCCCAGCCCAAGGATGATGA...AAAGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTTAAGTACATAGGAGCGTaGAGCCCAGGGTTGAACGTG +
Preference number: 4 (lower is better)
Translates to: LQSDNPSGAVGSTILPNFKYIGA*SPGLNV
Trigger: CACGTTCAACCCTGGGCTCCACGCTCCTATGTACTT...AAAGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp ACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAGCAGCCACACGGCTGTaGCCAGCCCGCTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: TCSSDSTKTAVSKDKNFRAATRL*PARCRT
Trigger: TGTTCTGCAGCGGGCTGGCCACAGCCGTGTGGCTGC...TCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp GAAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCGCAGCCACACGGCTGTaGCCAGCCCGCTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: ETCSSDSTKTAVSKDKNFAATRL*PARCRT
Trigger: TGTTCTGCAGCGGGCTGGCCACAGCCGTGTGGCTGC...GAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAAGGCAGCCACACGGCTGTaGCCAGCCCGCTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: SDSTKTAVSKDKNFRRHKAATRL*PARCRT
Trigger: TGTTCTGCAGCGGGCTGGCCACAGCCGTGTGGCTGC...CTTGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR TCA 90 bp CTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGAGGAGCAGCAGCTCTaGGGATGCAGCCCACGTGAG +
Preference number: 4 (lower is better)
Translates to: LAHQTPLKLQSPRTKTSEEEQQL*GCSPRE
Trigger: CTCACGTGGGCTGCATCCTCAGAGCTGCTGCTCCTC...TTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR TCA 90 bp ACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAGAGGAGCAGCAGCTCTaGGGATGCAGCCCACGTGAG +
Preference number: 4 (lower is better)
Translates to: TCSSDSTKTAVSKDKNFREEQQL*GCSPRE
Trigger: CTCACGTGGGCTGCATCCTCAGAGCTGCTGCTCCTC...TCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR TCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAGAGGAGCAGCAGCTCTaGGGATGCAGCCCACGTGAG +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTEEQQL*GCSPRE
Trigger: CTCACGTGGGCTGCATCCTCAGAGCTGCTGCTCCTC...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR TCA 90 bp TGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGAGAGGAGCAGCAGCTCTaGGGATGCAGCCCACGTGAG +
Preference number: 4 (lower is better)
Translates to: CSSDSTKTAVSKDKNFRREEQQL*GCSPRE
Trigger: CTCACGTGGGCTGCATCCTCAGAGCTGCTGCTCCTC...TCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR TCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACATGTGGATGGCCGTGTTaGCGGCGCAGAGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTCGWPC*RRRAAT
Trigger: TGTGGCTGCTCTGCGCCGTCAACACGGCCATCCACA...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR TCA 90 bp TCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACTGTGGATGGCCGTGTTaGCGGCGCAGAGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: SSDSTKTAVSKDKNFRRHCGWPC*RRRAAT
Trigger: TGTGGCTGCTCTGCGCCGTCAACACGGCCATCCACA...GTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR TCA 90 bp TGGAGCACAAGCACAAGACCTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGGATGCTGGAGACGATaGAGCCATAGGACGCGATGG +
Preference number: 4 (lower is better)
Translates to: WSTSTRPVFIRHRGFVHPGCWRR*SHRTRW
Trigger: CCATCGCGTCCTATGGCTTCATCGTCTCCAGCATCC...TGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGGTCTTGTGCTTGTGCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp AGCTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTCAGGAAGTTCACTATaGCGTAGAAAGCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: SFSLTTLQGLWGPQFCLTSGSSL*RRKHPP
Trigger: TGGCGGATGCTTTCTACGGCATAGTGAACTTCCTGA...AGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TGGAGCACAAGCACAAGACCTGTCTTTATTAGACACAGAGGATTCGTTCACCCACAACTTGCTCTTCCCTaGGCTGTAGCCAGAGACCGG +
Preference number: 4 (lower is better)
Translates to: WSTSTRPVFIRHRGFVHPQLALP*AVARDR
Trigger: CCGGTCTCTGGCTACAGCGCAGGGAAGAGCAAGTTG...TGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGGTCTTGTGCTTGTGCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp GCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACGCAGGCCAGCCAACTTaGTCTTCCCTGCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: AHQTPLKLQSPRTKTSEDAGQPT*SSLRCS
Trigger: GCTACAGCGCAGGGAAGAGCAAGTTGGCTGGCCTGC...GTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp AGCTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTCGGTTACCAACGTCTaGTTACTCATCATCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SFSLTTLQGLWGPQFCLTSVTNV*LLIILG
Trigger: CCCAAGGATGATGAGTAACCAGACGTTGGTAACCGA...AGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp AAGCCATGTTTATTGGAAAGTGAGACCACTGAGGGTTTCAACATGTTATTTGGGGCAGCCACACGGCTGTaGCCAGCCCGCTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: KPCLLESETTEGFNMLFGAATRL*PARCRT
Trigger: TGTTCTGCAGCGGGCTGGCCACAGCCGTGTGGCTGC...CCCAAATAACATGTTGAAACCCTCAGTGGTCTCACTTTCCAATAAACATGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR CCA 90 bp TCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAGCATCAGCCCCGTGTaGATGGCCGTGTTGACGGCG +
Preference number: 4 (lower is better)
Translates to: SSDSTKTAVSKDKNFRRHSISPV*MAVLTA
Trigger: CGCCGTCAACACGGCCATCCACACGGGGCTGATGCT...GTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp ACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGCATCAGCCCCGTGTaGATGGCCGTGTTGACGGCG +
Preference number: 4 (lower is better)
Translates to: TCSSDSTKTAVSKDKNFRSISPV*MAVLTA
Trigger: CGCCGTCAACACGGCCATCCACACGGGGCTGATGCT...TCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp GAAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGCATCAGCCCCGTGTaGATGGCCGTGTTGACGGCG +
Preference number: 4 (lower is better)
Translates to: ETCSSDSTKTAVSKDKNFSISPV*MAVLTA
Trigger: CGCCGTCAACACGGCCATCCACACGGGGCTGATGCT...GAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp AGCTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTAGCCATAGGACGCGATaGTCATCAGGAAGTTCACTA +
Preference number: 4 (lower is better)
Translates to: SFSLTTLQGLWGPQFCLTSHRTR*SSGSSL
Trigger: TAGTGAACTTCCTGATGACCATCGCGTCCTATGGCT...AGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp AGCTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTGTGATAAGATCAGTCTaGACAGGACTGTTCAGGACT +
Preference number: 4 (lower is better)
Translates to: SFSLTTLQGLWGPQFCLTVIRSV*TGLFRT
Trigger: AGTCCTGAACAGTCCTGTTCAGACTGATCTTATCAC...AGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR TCA 90 bp AGCTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTGGAAGAGGAAACAGCTaGATAAGAACACCCGGTATT +
Preference number: 4 (lower is better)
Translates to: SFSLTTLQGLWGPQFCLTGRGNS*IRTPGI
Trigger: AATACCGGGTGTTCTTATTCAGCTGTTTCCTCTTCC...AGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp CTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTTTCAGGAAGTTCACTATaGCGTAGAAAGCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: LQSDNPSGAVGSTILPNFSGSSL*RRKHPP
Trigger: TGGCGGATGCTTTCTACGGCATAGTGAACTTCCTGA...AAAGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp GCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACCAACTTGCTCTTCCCTaGGCTGTAGCCAGAGACCGG +
Preference number: 4 (lower is better)
Translates to: AHQTPLKLQSPRTKTSEDQLALP*AVARDR
Trigger: CCGGTCTCTGGCTACAGCGCAGGGAAGAGCAAGTTG...GTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAAGGCAGGCCAGCCAACTTaGTCTTCCCTGCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: SDSTKTAVSKDKNFRRHKAGQPT*SSLRCS
Trigger: GCTACAGCGCAGGGAAGAGCAAGTTGGCTGGCCTGC...CTTGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGAGCAGGCCAGCCAACTTaGTCTTCCCTGCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: CSSDSTKTAVSKDKNFRRAGQPT*SSLRCS
Trigger: GCTACAGCGCAGGGAAGAGCAAGTTGGCTGGCCTGC...TCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TGGAGCACAAGCACAAGACCTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGCTGGGACGGGTTTCTaGGACTATCAGGTGACTCTC +
Preference number: 4 (lower is better)
Translates to: WSTSTRPVFIRHRGFVHPAGTGF*DYQVTL
Trigger: GAGAGTCACCTGATAGTCCCAGAAACCCGTCCCAGC...TGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGGTCTTGTGCTTGTGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp GCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACAGCCCCCGTAGGAGATaGAGCTCTCTTCCGACACCA +
Preference number: 4 (lower is better)
Translates to: AHQTPLKLQSPRTKTSEDSPRRR*SSLPTP
Trigger: TGGTGTCGGAAGAGAGCTCCATCTCCTACGGGGGCT...GTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CCTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGGCAGCCACACGGCTGTaGCCAGCCCGCTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: PVFIRHRGFVHPVLSETMAATRL*PARCRT
Trigger: TGTTCTGCAGCGGGCTGGCCACAGCCGTGTGGCTGC...CATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp CTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTTGGAAGAGGAAACAGCTaGATAAGAACACCCGGTATT +
Preference number: 4 (lower is better)
Translates to: LQSDNPSGAVGSTILPNFGRGNS*IRTPGI
Trigger: AATACCGGGTGTTCTTATTCAGCTGTTTCCTCTTCC...AAAGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp CTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGGGAGGAGCAGCAGCTCTaGGGATGCAGCCCACGTGAG +
Preference number: 4 (lower is better)
Translates to: LSLLDTEDSFTQFYLKQWEEQQL*GCSPRE
Trigger: CTCACGTGGGCTGCATCCTCAGAGCTGCTGCTCCTC...CCATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp CTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGGTGTGGATGGCCGTGTTaGCGGCGCAGAGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: LSLLDTEDSFTQFYLKQWCGWPC*RRRAAT
Trigger: TGTGGCTGCTCTGCGCCGTCAACACGGCCATCCACA...CCATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp GCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACCTGCCAACTCAGCACTaGCACCACCTTGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: AHQTPLKLQSPRTKTSEDLPTQH*HHLGVR
Trigger: TCTGACTCCAAGGTGGTGTCAGTGCTGAGTTGGCAG...GTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAACCCGGTATTCTGGGTaGTCCGAAAAGCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTTRYSG*SEKPCR
Trigger: CCTGCAGGGCTTTTCGGAGCACCCAGAATACCGGGT...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp GCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACCCTTGCTCATCATGCTaGTGTAATGCAGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: AHQTPLKLQSPRTKTSEDPCSSC*CNAAGG
Trigger: GCCACCCGCTGCATTACAGCAGCATGATGAGCAAGG...GTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp CTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAACTGTGGCCAGCCCGCTaGAGAACACCTTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: LAHQTPLKLQSPRTKTSELWPAR*RTPCSS
Trigger: TGATGAGCAAGGTGTTCTGCAGCGGGCTGGCCACAG...TTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACTGTGGCCAGCCCGCTaGAGAACACCTTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: CSSDSTKTAVSKDKNFRRLWPAR*RTPCSS
Trigger: TGATGAGCAAGGTGTTCTGCAGCGGGCTGGCCACAG...TCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACGTGGAGAAGGCTTTCTaGCTCCCCCAGGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: SSDSTKTAVSKDKNFRRHVEKAF*LPQAVF
Trigger: GAAGACTGCCTGGGGGAGGCAGAAAGCCTTCTCCAC...GTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAGTGGAGAAGGCTTTCTaGCTCCCCCAGGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTVEKAF*LPQAVF
Trigger: GAAGACTGCCTGGGGGAGGCAGAAAGCCTTCTCCAC...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp CTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAACAACTTGCTCTTCCCTaGGCTGTAGCCAGAGACCGG +
Preference number: 4 (lower is better)
Translates to: LAHQTPLKLQSPRTKTSEQLALP*AVARDR
Trigger: CCGGTCTCTGGCTACAGCGCAGGGAAGAGCAAGTTG...TTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACACAACTTGCTCTTCCCTaGGCTGTAGCCAGAGACCGG +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTQLALP*AVARDR
Trigger: CCGGTCTCTGGCTACAGCGCAGGGAAGAGCAAGTTG...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp AAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGCAGGCCAGCCAACTTaGTCTTCCCTGCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: KLAHQTPLKLQSPRTKTSAGQPT*SSLRCS
Trigger: GCTACAGCGCAGGGAAGAGCAAGTTGGCTGGCCTGC...TGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TGGAGCACAAGCACAAGACCTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTACTCATCATCCTTaGGCTGGGACGGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: WSTSTRPVFIRHRGFVHPVTHHP*AGTGFW
Trigger: CCAGAAACCCGTCCCAGCCCAAGGATGATGAGTAAC...TGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGGTCTTGTGCTTGTGCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp ACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGCCCCCGTAGGAGATaGAGCTCTCTTCCGACACCA +
Preference number: 4 (lower is better)
Translates to: TCSSDSTKTAVSKDKNFRSPRRR*SSLPTP
Trigger: TGGTGTCGGAAGAGAGCTCCATCTCCTACGGGGGCT...TCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAAGAGCCCCCGTAGGAGATaGAGCTCTCTTCCGACACCA +
Preference number: 4 (lower is better)
Translates to: SDSTKTAVSKDKNFRRHKSPRRR*SSLPTP
Trigger: TGGTGTCGGAAGAGAGCTCCATCTCCTACGGGGGCT...CTTGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp GCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACTGTCTCAGAGGCTGGTaGGTCACACCTACCGCAATC +
Preference number: 4 (lower is better)
Translates to: AHQTPLKLQSPRTKTSEDCLRGW*VTPTAI
Trigger: GATTGCGGTAGGTGTGACCCACCAGCCTCTGAGACA...GTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp ACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGATGGTGTCTCAGAGGCTaGTGGGTCACACCTACCGCA +
Preference number: 4 (lower is better)
Translates to: TCSSDSTKTAVSKDKNFRWCLRG*WVTPTA
Trigger: TGCGGTAGGTGTGACCCACCAGCCTCTGAGACACCA...TCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAATGGTGTCTCAGAGGCTaGTGGGTCACACCTACCGCA +
Preference number: 4 (lower is better)
Translates to: LAHQTPLKLQSPRTKTSEWCLRG*WVTPTA
Trigger: TGCGGTAGGTGTGACCCACCAGCCTCTGAGACACCA...TTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp GAAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCTGGTGTCTCAGAGGCTaGTGGGTCACACCTACCGCA +
Preference number: 4 (lower is better)
Translates to: ETCSSDSTKTAVSKDKNFWCLRG*WVTPTA
Trigger: TGCGGTAGGTGTGACCCACCAGCCTCTGAGACACCA...GAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACATGGTGTCTCAGAGGCTaGTGGGTCACACCTACCGCA +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTWCLRG*WVTPTA
Trigger: TGCGGTAGGTGTGACCCACCAGCCTCTGAGACACCA...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TGGAGCACAAGCACAAGACCTGTCTTTATTAGACACAGAGGATTCGTTCACCCATCAGACCAAGAGATCTaGTGTCTCAGAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: WSTSTRPVFIRHRGFVHPSDQEI*CLRGWW
Trigger: CCACCAGCCTCTGAGACACCAGATCTCTTGGTCTGA...TGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGGTCTTGTGCTTGTGCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp AAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGGATGCTGGAGACGATaGAGCCATAGGACGCGATGG +
Preference number: 4 (lower is better)
Translates to: KLAHQTPLKLQSPRTKTSGCWRR*SHRTRW
Trigger: CCATCGCGTCCTATGGCTTCATCGTCTCCAGCATCC...TGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR TCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACACAGAGCCACTTATTGTaGTTGGGTGGGGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTQSHLL*LGGDRR
Trigger: CCTCCTGTCCCCACCCAATCACAATAAGTGGCTCTG...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp TCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAAGCAGAGCCACTTATTGTaGTTGGGTGGGGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: SDSTKTAVSKDKNFRRHKQSHLL*LGGDRR
Trigger: CCTCCTGTCCCCACCCAATCACAATAAGTGGCTCTG...CTTGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp CTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTTATCCACAGCTTCATGTaGTTTCAGAGCCACTTATTG +
Preference number: 4 (lower is better)
Translates to: LQSDNPSGAVGSTILPNFIHSFM*FQSHLL
Trigger: CAATAAGTGGCTCTGAAATCACATGAAGCTGTGGAT...AAAGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp GCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACTGCTCCGAAAAGCCCTaGAGGATGAACTCGGTTACC +
Preference number: 4 (lower is better)
Translates to: AHQTPLKLQSPRTKTSEDCSEKP*RMNSVT
Trigger: GGTAACCGAGTTCATCCTGCAGGGCTTTTCGGAGCA...GTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACCCTTGCTCATCATGCTaGTGTAATGCAGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SSDSTKTAVSKDKNFRRHPCSSC*CNAAGG
Trigger: GCCACCCGCTGCATTACAGCAGCATGATGAGCAAGG...GTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp CTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAACCTTGCTCATCATGCTaGTGTAATGCAGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LAHQTPLKLQSPRTKTSEPCSSC*CNAAGG
Trigger: GCCACCCGCTGCATTACAGCAGCATGATGAGCAAGG...TTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TGGAGCACAAGCACAAGACCTGTCTTTATTAGACACAGAGGATTCGTTCACCCAACACCTTGCTCATCATaGTGCTGTAATGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: WSTSTRPVFIRHRGFVHPTPCSS*CCNAAG
Trigger: ACCCGCTGCATTACAGCAGCATGATGAGCAAGGTGT...TGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGGTCTTGTGCTTGTGCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp AAGCCATGTTTATTGGAAAGTGAGACCACTGAGGGTTTCAACATGTTATTTGGGCTGTGGCCAGCCCGCTaGAGAACACCTTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: KPCLLESETTEGFNMLFGLWPAR*RTPCSS
Trigger: TGATGAGCAAGGTGTTCTGCAGCGGGCTGGCCACAG...CCCAAATAACATGTTGAAACCCTCAGTGGTCTCACTTTCCAATAAACATGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR GCA 90 bp AAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCACTGTGGCCAGCCCGCTaGAGAACACCTTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: KLAHQTPLKLQSPRTKTSLWPAR*RTPCSS
Trigger: TGATGAGCAAGGTGTTCTGCAGCGGGCTGGCCACAG...TGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp AAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGTGGAGAAGGCTTTCTaGCTCCCCCAGGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: KLAHQTPLKLQSPRTKTSVEKAF*LPQAVF
Trigger: GAAGACTGCCTGGGGGAGGCAGAAAGCCTTCTCCAC...TGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TTGGAAAGTGAGACCACTGAGGGTTTCAACATGTTATTTGGGACTCAGAATTCACAACTTGCTCTTCCCTaGGCTGTAGCCAGAGACCGG +
Preference number: 4 (lower is better)
Translates to: LESETTEGFNMLFGTQNSQLALP*AVARDR
Trigger: CCGGTCTCTGGCTACAGCGCAGGGAAGAGCAAGTTG...TGAATTCTGAGTCCCAAATAACATGTTGAAACCCTCAGTGGTCTCACTTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR GCA 90 bp TCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACGGCCCTGTGTTTCTCTaGCAACTCAGCACTGACACC +
Preference number: 4 (lower is better)
Translates to: SSDSTKTAVSKDKNFRRHGPVFL*QLSTDT
Trigger: GGTGTCAGTGCTGAGTTGGCAGAGAAACACAGGGCC...GTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAAGGGCCCTGTGTTTCTCTaGCAACTCAGCACTGACACC +
Preference number: 4 (lower is better)
Translates to: SDSTKTAVSKDKNFRRHKGPVFL*QLSTDT
Trigger: GGTGTCAGTGCTGAGTTGGCAGAGAAACACAGGGCC...CTTGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGCTGGGACGGGTTTCTaGGACTATCAGGTGACTCTC +
Preference number: 4 (lower is better)
Translates to: LAHQTPLKLQSPRTKTSEAGTGF*DYQVTL
Trigger: GAGAGTCACCTGATAGTCCCAGAAACCCGTCCCAGC...TTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAGCTGGGACGGGTTTCTaGGACTATCAGGTGACTCTC +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTAGTGF*DYQVTL
Trigger: GAGAGTCACCTGATAGTCCCAGAAACCCGTCCCAGC...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp ACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAGCTGGGACGGGTTTCTaGGACTATCAGGTGACTCTC +
Preference number: 4 (lower is better)
Translates to: TCSSDSTKTAVSKDKNFRAGTGF*DYQVTL
Trigger: GAGAGTCACCTGATAGTCCCAGAAACCCGTCCCAGC...TCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp GCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACGTTACTCATCATCCTTaGGCTGGGACGGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: AHQTPLKLQSPRTKTSEDVTHHP*AGTGFW
Trigger: CCAGAAACCCGTCCCAGCCCAAGGATGATGAGTAAC...GTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGAACACCCGGTATTCTaGGTGCTCCGAAAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LAHQTPLKLQSPRTKTSEEHPVF*VLRKAL
Trigger: CAGGGCTTTTCGGAGCACCCAGAATACCGGGTGTTC...TTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAGAACACCCGGTATTCTaGGTGCTCCGAAAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTEHPVF*VLRKAL
Trigger: CAGGGCTTTTCGGAGCACCCAGAATACCGGGTGTTC...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGAGAACACCCGGTATTCTaGGTGCTCCGAAAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: CSSDSTKTAVSKDKNFRREHPVF*VLRKAL
Trigger: CAGGGCTTTTCGGAGCACCCAGAATACCGGGTGTTC...TCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TTGGAAAGTGAGACCACTGAGGGTTTCAACATGTTATTTGGGACTCAGAATTCAAGCCCCCGTAGGAGATaGAGCTCTCTTCCGACACCA +
Preference number: 4 (lower is better)
Translates to: LESETTEGFNMLFGTQNSSPRRR*SSLPTP
Trigger: TGGTGTCGGAAGAGAGCTCCATCTCCTACGGGGGCT...TGAATTCTGAGTCCCAAATAACATGTTGAAACCCTCAGTGGTCTCACTTTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR CCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACATGTCTCAGAGGCTGGTaGGTCACACCTACCGCAATC +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTCLRGW*VTPTAI
Trigger: GATTGCGGTAGGTGTGACCCACCAGCCTCTGAGACA...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACTGTCTCAGAGGCTGGTaGGTCACACCTACCGCAATC +
Preference number: 4 (lower is better)
Translates to: SSDSTKTAVSKDKNFRRHCLRGW*VTPTAI
Trigger: GATTGCGGTAGGTGTGACCCACCAGCCTCTGAGACA...GTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp GAAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCTGTCTCAGAGGCTGGTaGGTCACACCTACCGCAATC +
Preference number: 4 (lower is better)
Translates to: ETCSSDSTKTAVSKDKNFCLRGW*VTPTAI
Trigger: GATTGCGGTAGGTGTGACCCACCAGCCTCTGAGACA...GAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAACCCTTCAGGGGCTGTaGGGTCCACAATTCTGCCTA +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTTLQGL*GPQFCL
Trigger: TAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGT...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAAGACCCTTCAGGGGCTGTaGGGTCCACAATTCTGCCTA +
Preference number: 4 (lower is better)
Translates to: SDSTKTAVSKDKNFRRHKTLQGL*GPQFCL
Trigger: TAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGT...CTTGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTTCATTTATCAAACCCTTaGGCACTCAAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LQSDNPSGAVGSTILPNFHLSNP*ALKLLK
Trigger: CTTCAGAAGCTTGAGTGCCCAAGGGTTTGATAAATG...AAAGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536058.1
ENST00000612185.1
CDS-3UTR TCA 90 bp TCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAAGCATCACCACTTATTGTaGTTGGGTGGGGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: SDSTKTAVSKDKNFRRHKHHHLL*LGGDRR
Trigger: CCTCCTGTCCCCACCCAATCACAATAAGTGGTGATG...CTTGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374401.3
ENST00000615770.1
CDS-3UTR TCA 90 bp CTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAACATCACCACTTATTGTaGTTGGGTGGGGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: LAHQTPLKLQSPRTKTSEHHHLL*LGGDRR
Trigger: CCTCCTGTCCCCACCCAATCACAATAAGTGGTGATG...TTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374401.3
ENST00000615770.1
CDS-3UTR TCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACATCTGGGACTATCAGGTaGCTCTCCATCCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTSGTIR*LSIHSF
Trigger: GAAGCTGTGGATGGAGAGTCACCTGATAGTCCCAGA...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR TCA 90 bp GCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACAAAAGCCCTGCAGGATaGACTCGGTTACCAACGTCT +
Preference number: 4 (lower is better)
Translates to: AHQTPLKLQSPRTKTSEDKSPAG*TRLPTS
Trigger: AGACGTTGGTAACCGAGTTCATCCTGCAGGGCTTTT...GTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR TCA 90 bp TATCTGAAACAATGGAAGGATAGCAATGCCTTACTACAATGCCGTTTAACTTATTGTGGATGGCCGTGTTaGCGGCGCAGAGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: YLKQWKDSNALLQCRLTYCGWPC*RRRAAT
Trigger: TGTGGCTGCTCTGCGCCGTCAACACGGCCATCCACA...ATAAGTTAAACGGCATTGTAGTAAGGCATTGCTATCCTTCCATTGTTTCAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp AAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCACTGCCAACTCAGCACTaGCACCACCTTGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: KLAHQTPLKLQSPRTKTSLPTQH*HHLGVR
Trigger: TCTGACTCCAAGGTGGTGTCAGTGCTGAGTTGGCAG...TGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp GCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACAACAAAGCTTCAGTCTaGCAACCCTTCAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: AHQTPLKLQSPRTKTSEDNKASV*QPFRGC
Trigger: ACAGCCCCTGAAGGGTTGTCAGACTGAAGCTTTGTT...GTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp CTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTTTCACCCAGTTTTATCTaGAACAATGGAAGGATAGCA +
Preference number: 4 (lower is better)
Translates to: LQSDNPSGAVGSTILPNFSPSFI*NNGRIA
Trigger: TGCTATCCTTCCATTGTTTCAGATAAAACTGGGTGA...AAAGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp GAAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCTGCTCCGAAAAGCCCTaGAGGATGAACTCGGTTACC +
Preference number: 4 (lower is better)
Translates to: ETCSSDSTKTAVSKDKNFCSEKP*RMNSVT
Trigger: GGTAACCGAGTTCATCCTGCAGGGCTTTTCGGAGCA...GAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp CTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAATGCTCCGAAAAGCCCTaGAGGATGAACTCGGTTACC +
Preference number: 4 (lower is better)
Translates to: LAHQTPLKLQSPRTKTSECSEKP*RMNSVT
Trigger: GGTAACCGAGTTCATCCTGCAGGGCTTTTCGGAGCA...TTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGATGCTCCGAAAAGCCCTaGAGGATGAACTCGGTTACC +
Preference number: 4 (lower is better)
Translates to: CSSDSTKTAVSKDKNFRRCSEKP*RMNSVT
Trigger: GGTAACCGAGTTCATCCTGCAGGGCTTTTCGGAGCA...TCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp AAGCCATGTTTATTGGAAAGTGAGACCACTGAGGGTTTCAACATGTTATTTGGGCCTTGCTCATCATGCTaGTGTAATGCAGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: KPCLLESETTEGFNMLFGPCSSC*CNAAGG
Trigger: GCCACCCGCTGCATTACAGCAGCATGATGAGCAAGG...CCCAAATAACATGTTGAAACCCTCAGTGGTCTCACTTTCCAATAAACATGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR GCA 90 bp GCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACACCTTGCTCATCATaGTGCTGTAATGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: AHQTPLKLQSPRTKTSEDTPCSS*CCNAAG
Trigger: ACCCGCTGCATTACAGCAGCATGATGAGCAAGGTGT...GTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TGGAGCACAAGCACAAGACCTGTCTTTATTAGACACAGAGGATTCGTTCACCCACGCTGCAGAACACCTTaGTCATCATGCTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: WSTSTRPVFIRHRGFVHPRCRTP*SSCCCN
Trigger: ATTACAGCAGCATGATGAGCAAGGTGTTCTGCAGCG...TGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGGTCTTGTGCTTGTGCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TGGAGCACAAGCACAAGACCTGTCTTTATTAGACACAGAGGATTCGTTCACCCATCAGGAAGTTCACTATaGCGTAGAAAGCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: WSTSTRPVFIRHRGFVHPSGSSL*RRKHPP
Trigger: TGGCGGATGCTTTCTACGGCATAGTGAACTTCCTGA...TGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGGTCTTGTGCTTGTGCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACCTCCCAGCTCATCCATaGACAGGTTCTGCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: SSDSTKTAVSKDKNFRRHLPAHP*TGSAGL
Trigger: TAACCCAGCAGAACCTGTGCATGGATGAGCTGGGAG...GTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp AAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGGCCCTGTGTTTCTCTaGCAACTCAGCACTGACACC +
Preference number: 4 (lower is better)
Translates to: KLAHQTPLKLQSPRTKTSGPVFL*QLSTDT
Trigger: GGTGTCAGTGCTGAGTTGGCAGAGAAACACAGGGCC...TGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp AAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGCTGGGACGGGTTTCTaGGACTATCAGGTGACTCTC +
Preference number: 4 (lower is better)
Translates to: KLAHQTPLKLQSPRTKTSAGTGF*DYQVTL
Trigger: GAGAGTCACCTGATAGTCCCAGAAACCCGTCCCAGC...TGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACTCATCATCCTTGGGCTaGGACGGGTTTCTGGGACTA +
Preference number: 4 (lower is better)
Translates to: SSDSTKTAVSKDKNFRRHSSSLG*DGFLGL
Trigger: TAGTCCCAGAAACCCGTCCCAGCCCAAGGATGATGA...GTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp ACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGATCATCATCCTTGGGCTaGGACGGGTTTCTGGGACTA +
Preference number: 4 (lower is better)
Translates to: TCSSDSTKTAVSKDKNFRSSSLG*DGFLGL
Trigger: TAGTCCCAGAAACCCGTCCCAGCCCAAGGATGATGA...TCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACATCATCATCCTTGGGCTaGGACGGGTTTCTGGGACTA +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTSSSLG*DGFLGL
Trigger: TAGTCCCAGAAACCCGTCCCAGCCCAAGGATGATGA...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAATCATCATCCTTGGGCTaGGACGGGTTTCTGGGACTA +
Preference number: 4 (lower is better)
Translates to: LAHQTPLKLQSPRTKTSESSSLG*DGFLGL
Trigger: TAGTCCCAGAAACCCGTCCCAGCCCAAGGATGATGA...TTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGTTACTCATCATCCTTaGGCTGGGACGGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LAHQTPLKLQSPRTKTSEVTHHP*AGTGFW
Trigger: CCAGAAACCCGTCCCAGCCCAAGGATGATGAGTAAC...TTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp ACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAGTTACTCATCATCCTTaGGCTGGGACGGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: TCSSDSTKTAVSKDKNFRVTHHP*AGTGFW
Trigger: CCAGAAACCCGTCCCAGCCCAAGGATGATGAGTAAC...TCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAAGAAGTACATAGGAGCGTaGAGCCCAGGGTTGAACGTG +
Preference number: 4 (lower is better)
Translates to: SDSTKTAVSKDKNFRRHKKYIGA*SPGLNV
Trigger: CACGTTCAACCCTGGGCTCCACGCTCCTATGTACTT...CTTGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGAAAGTACATAGGAGCGTaGAGCCCAGGGTTGAACGTG +
Preference number: 4 (lower is better)
Translates to: CSSDSTKTAVSKDKNFRRKYIGA*SPGLNV
Trigger: CACGTTCAACCCTGGGCTCCACGCTCCTATGTACTT...TCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp ACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAAGTACATAGGAGCGTaGAGCCCAGGGTTGAACGTG +
Preference number: 4 (lower is better)
Translates to: TCSSDSTKTAVSKDKNFRKYIGA*SPGLNV
Trigger: CACGTTCAACCCTGGGCTCCACGCTCCTATGTACTT...TCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGGAGCCCCCGTAGGAGATaGAGCTCTCTTCCGACACCA +
Preference number: 4 (lower is better)
Translates to: LSLLDTEDSFTQFYLKQWSPRRR*SSLPTP
Trigger: TGGTGTCGGAAGAGAGCTCCATCTCCTACGGGGGCT...CCATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAAGATTAGAGCTGACTCATaGCAGCTGTCCTCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SDSTKTAVSKDKNFRRHKIRADS*QLSSLQ
Trigger: CTGGAGCGAGGACAGCTGCCATGAGTCAGCTCTAAT...CTTGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACATTAGAGCTGACTCATaGCAGCTGTCCTCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSDSTKTAVSKDKNFRRHIRADS*QLSSLQ
Trigger: CTGGAGCGAGGACAGCTGCCATGAGTCAGCTCTAAT...GTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp ACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAATTAGAGCTGACTCATaGCAGCTGTCCTCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TCSSDSTKTAVSKDKNFRIRADS*QLSSLQ
Trigger: CTGGAGCGAGGACAGCTGCCATGAGTCAGCTCTAAT...TCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp GAAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCATTAGAGCTGACTCATaGCAGCTGTCCTCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ETCSSDSTKTAVSKDKNFIRADS*QLSSLQ
Trigger: CTGGAGCGAGGACAGCTGCCATGAGTCAGCTCTAAT...GAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTTCATTTATCAAACCCTTaGGCACTCAAGCTTACTCAA +
Preference number: 4 (lower is better)
Translates to: LQSDNPSGAVGSTILPNFHLSNP*ALKLTQ
Trigger: TTGAGTAAGCTTGAGTGCCCAAGGGTTTGATAAATG...AAAGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553795.6
ENST00000616267.4
CDS-3UTR TCA 90 bp TCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAAGAAAAGCCCTGCAGGATaGACTCGGTTACCAACGTCT +
Preference number: 4 (lower is better)
Translates to: SDSTKTAVSKDKNFRRHKKSPAG*TRLPTS
Trigger: AGACGTTGGTAACCGAGTTCATCCTGCAGGGCTTTT...CTTGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR TCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAAAAAGCCCTGCAGGATaGACTCGGTTACCAACGTCT +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTKSPAG*TRLPTS
Trigger: AGACGTTGGTAACCGAGTTCATCCTGCAGGGCTTTT...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR TCA 90 bp TCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAAGAACAAAGCTTCAGTCTaGCAACCCTTCAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SDSTKTAVSKDKNFRRHKNKASV*QPFRGC
Trigger: ACAGCCCCTGAAGGGTTGTCAGACTGAAGCTTTGTT...CTTGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp GAAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAACAAAGCTTCAGTCTaGCAACCCTTCAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: ETCSSDSTKTAVSKDKNFNKASV*QPFRGC
Trigger: ACAGCCCCTGAAGGGTTGTCAGACTGAAGCTTTGTT...GAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAAACAAAGCTTCAGTCTaGCAACCCTTCAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTNKASV*QPFRGC
Trigger: ACAGCCCCTGAAGGGTTGTCAGACTGAAGCTTTGTT...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp TCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAACAAAGCTTCAGTCTaGCAACCCTTCAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SSDSTKTAVSKDKNFRRHNKASV*QPFRGC
Trigger: ACAGCCCCTGAAGGGTTGTCAGACTGAAGCTTTGTT...GTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp CTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGGCAGAGCCACTTATTGTaGTTGGGTGGGGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: LSLLDTEDSFTQFYLKQWQSHLL*LGGDRR
Trigger: CCTCCTGTCCCCACCCAATCACAATAAGTGGCTCTG...CCATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGAACACCTTGCTCATCATaGTGCTGTAATGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: CSSDSTKTAVSKDKNFRRTPCSS*CCNAAG
Trigger: ACCCGCTGCATTACAGCAGCATGATGAGCAAGGTGT...TCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAAGACACCTTGCTCATCATaGTGCTGTAATGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: SDSTKTAVSKDKNFRRHKTPCSS*CCNAAG
Trigger: ACCCGCTGCATTACAGCAGCATGATGAGCAAGGTGT...CTTGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp GCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACCGCTGCAGAACACCTTaGTCATCATGCTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: AHQTPLKLQSPRTKTSEDRCRTP*SSCCCN
Trigger: ATTACAGCAGCATGATGAGCAAGGTGTTCTGCAGCG...GTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TGGAGCACAAGCACAAGACCTGTCTTTATTAGACACAGAGGATTCGTTCACCCACCCAGTCCAGAAACTTaGTCATCAGACTCCACTAAA +
Preference number: 4 (lower is better)
Translates to: WSTSTRPVFIRHRGFVHPPSPET*SSDSTK
Trigger: TTTAGTGGAGTCTGATGAGCAAGTTTCTGGACTGGG...TGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGGTCTTGTGCTTGTGCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGGGCTGGGACGGGTTTCTaGGACTATCAGGTGACTCTC +
Preference number: 4 (lower is better)
Translates to: LSLLDTEDSFTQFYLKQWAGTGF*DYQVTL
Trigger: GAGAGTCACCTGATAGTCCCAGAAACCCGTCCCAGC...CCATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TTGGAAAGTGAGACCACTGAGGGTTTCAACATGTTATTTGGGACTCAGAATTCATCAGACCAAGAGATCTaGTGTCTCAGAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LESETTEGFNMLFGTQNSSDQEI*CLRGWW
Trigger: CCACCAGCCTCTGAGACACCAGATCTCTTGGTCTGA...TGAATTCTGAGTCCCAAATAACATGTTGAAACCCTCAGTGGTCTCACTTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR CCA 90 bp AAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCATCAGACCAAGAGATCTaGTGTCTCAGAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: KLAHQTPLKLQSPRTKTSSDQEI*CLRGWW
Trigger: CCACCAGCCTCTGAGACACCAGATCTCTTGGTCTGA...TGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGAGCACTGACACCACCTTaGAGTCAGACCAAGAGATCT +
Preference number: 4 (lower is better)
Translates to: CSSDSTKTAVSKDKNFRRALTPP*SQTKRS
Trigger: AGATCTCTTGGTCTGACTCCAAGGTGGTGTCAGTGC...TCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGCACTGACACCACCTTaGAGTCAGACCAAGAGATCT +
Preference number: 4 (lower is better)
Translates to: LAHQTPLKLQSPRTKTSEALTPP*SQTKRS
Trigger: AGATCTCTTGGTCTGACTCCAAGGTGGTGTCAGTGC...TTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CCTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGACCCTTCAGGGGCTGTaGGGTCCACAATTCTGCCTA +
Preference number: 4 (lower is better)
Translates to: PVFIRHRGFVHPVLSETMTLQGL*GPQFCL
Trigger: TAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGT...CATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp GCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACGGAAGAGGAAACAGCTaGATAAGAACACCCGGTATT +
Preference number: 4 (lower is better)
Translates to: AHQTPLKLQSPRTKTSEDGRGNS*IRTPGI
Trigger: AATACCGGGTGTTCTTATTCAGCTGTTTCCTCTTCC...GTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR TCA 90 bp TATCTGAAACAATGGAAGGATAGCAATGCCTTACTACAATGCCGTTTAACTTATGGATGCTGGAGACGATaGAGCCATAGGACGCGATGG +
Preference number: 4 (lower is better)
Translates to: YLKQWKDSNALLQCRLTYGCWRR*SHRTRW
Trigger: CCATCGCGTCCTATGGCTTCATCGTCTCCAGCATCC...ATAAGTTAAACGGCATTGTAGTAAGGCATTGCTATCCTTCCATTGTTTCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp GCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACTCCAGAGGAAACAGTTaGGGTAAGATAATGGGGGTA +
Preference number: 4 (lower is better)
Translates to: AHQTPLKLQSPRTKTSEDSRGNS*GKIMGV
Trigger: TACCCCCATTATCTTACCTCAACTGTTTCCTCTGGA...GTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp TGGAGCACAAGCACAAGACCTGTCTTTATTAGACACAGAGGATTCGTTCACCCAATCCACAGCTTCATGTaGTTTCAGAGCCACTTATTG +
Preference number: 4 (lower is better)
Translates to: WSTSTRPVFIRHRGFVHPIHSFM*FQSHLL
Trigger: CAATAAGTGGCTCTGAAATCACATGAAGCTGTGGAT...TGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGGTCTTGTGCTTGTGCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp AAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAACACCTTGCTCATCATaGTGCTGTAATGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: KLAHQTPLKLQSPRTKTSTPCSS*CCNAAG
Trigger: ACCCGCTGCATTACAGCAGCATGATGAGCAAGGTGT...TGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp CTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAACGCTGCAGAACACCTTaGTCATCATGCTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: LAHQTPLKLQSPRTKTSERCRTP*SSCCCN
Trigger: ATTACAGCAGCATGATGAGCAAGGTGTTCTGCAGCG...TTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACGCTGCAGAACACCTTaGTCATCATGCTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: CSSDSTKTAVSKDKNFRRRCRTP*SSCCCN
Trigger: ATTACAGCAGCATGATGAGCAAGGTGTTCTGCAGCG...TCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp GAAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCTCAGGAAGTTCACTATaGCGTAGAAAGCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: ETCSSDSTKTAVSKDKNFSGSSL*RRKHPP
Trigger: TGGCGGATGCTTTCTACGGCATAGTGAACTTCCTGA...GAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGATCAGGAAGTTCACTATaGCGTAGAAAGCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: CSSDSTKTAVSKDKNFRRSGSSL*RRKHPP
Trigger: TGGCGGATGCTTTCTACGGCATAGTGAACTTCCTGA...TCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TATCTGAAACAATGGAAGGATAGCAATGCCTTACTACAATGCCGTTTAACTTATGTGGAGAAGGCTTTCTaGCTCCCCCAGGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: YLKQWKDSNALLQCRLTYVEKAF*LPQAVF
Trigger: GAAGACTGCCTGGGGGAGGCAGAAAGCCTTCTCCAC...ATAAGTTAAACGGCATTGTAGTAAGGCATTGCTATCCTTCCATTGTTTCAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TATCTGAAACAATGGAAGGATAGCAATGCCTTACTACAATGCCGTTTAACTTATCAACTTGCTCTTCCCTaGGCTGTAGCCAGAGACCGG +
Preference number: 4 (lower is better)
Translates to: YLKQWKDSNALLQCRLTYQLALP*AVARDR
Trigger: CCGGTCTCTGGCTACAGCGCAGGGAAGAGCAAGTTG...ATAAGTTAAACGGCATTGTAGTAAGGCATTGCTATCCTTCCATTGTTTCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTTGTCTTCTCAATCAACTaGTCAATAATGAGATCAAAG +
Preference number: 4 (lower is better)
Translates to: LQSDNPSGAVGSTILPNFVFSIN*SIMRSK
Trigger: CTTTGATCTCATTATTGACCAGTTGATTGAGAAGAC...AAAGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp GATTTTCCAGTGCAGTTTTGTAATAGCATGGAGCACAAGCACAAGACCTGTCTTCTTATTGTGATTGGGTaGGGACAGGAGGACAGTCTT +
Preference number: 4 (lower is better)
Translates to: DFPVQFCNSMEHKHKTCLLIVIG*GQEDSL
Trigger: AAGACTGTCCTCCTGTCCCCACCCAATCACAATAAG...AAGACAGGTCTTGTGCTTGTGCTCCATGCTATTACAAAACTGCACTGGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR CCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACACTTATTGTGATTGGGTaGGGACAGGAGGACAGTCTT +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTLIVIG*GQEDSL
Trigger: AAGACTGTCCTCCTGTCCCCACCCAATCACAATAAG...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CCTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGTCATCATCCTTGGGCTaGGACGGGTTTCTGGGACTA +
Preference number: 4 (lower is better)
Translates to: PVFIRHRGFVHPVLSETMSSSLG*DGFLGL
Trigger: TAGTCCCAGAAACCCGTCCCAGCCCAAGGATGATGA...CATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACTCGGTTACCAACGTCTaGTTACTCATCATCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SSDSTKTAVSKDKNFRRHSVTNV*LLIILG
Trigger: CCCAAGGATGATGAGTAACCAGACGTTGGTAACCGA...GTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp GAAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCTCGGTTACCAACGTCTaGTTACTCATCATCCTTGGG +
Preference number: 4 (lower is better)
Translates to: ETCSSDSTKTAVSKDKNFSVTNV*LLIILG
Trigger: CCCAAGGATGATGAGTAACCAGACGTTGGTAACCGA...GAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp ACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGATCGGTTACCAACGTCTaGTTACTCATCATCCTTGGG +
Preference number: 4 (lower is better)
Translates to: TCSSDSTKTAVSKDKNFRSVTNV*LLIILG
Trigger: CCCAAGGATGATGAGTAACCAGACGTTGGTAACCGA...TCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGGAAGTACATAGGAGCGTaGAGCCCAGGGTTGAACGTG +
Preference number: 4 (lower is better)
Translates to: LSLLDTEDSFTQFYLKQWKYIGA*SPGLNV
Trigger: CACGTTCAACCCTGGGCTCCACGCTCCTATGTACTT...CCATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAGCCATAGGACGCGATaGTCATCAGGAAGTTCACTA +
Preference number: 4 (lower is better)
Translates to: SSDSTKTAVSKDKNFRRHSHRTR*SSGSSL
Trigger: TAGTGAACTTCCTGATGACCATCGCGTCCTATGGCT...GTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGAAGCCATAGGACGCGATaGTCATCAGGAAGTTCACTA +
Preference number: 4 (lower is better)
Translates to: CSSDSTKTAVSKDKNFRRSHRTR*SSGSSL
Trigger: TAGTGAACTTCCTGATGACCATCGCGTCCTATGGCT...TCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAAGCCATAGGACGCGATaGTCATCAGGAAGTTCACTA +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTSHRTR*SSGSSL
Trigger: TAGTGAACTTCCTGATGACCATCGCGTCCTATGGCT...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR TCA 90 bp CTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGGAAAAGCCCTGCAGGATaGACTCGGTTACCAACGTCT +
Preference number: 4 (lower is better)
Translates to: LSLLDTEDSFTQFYLKQWKSPAG*TRLPTS
Trigger: AGACGTTGGTAACCGAGTTCATCCTGCAGGGCTTTT...CCATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp ACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAGGAAGAGGAAACAGCTaGATAAGAACACCCGGTATT +
Preference number: 4 (lower is better)
Translates to: TCSSDSTKTAVSKDKNFRGRGNS*IRTPGI
Trigger: AATACCGGGTGTTCTTATTCAGCTGTTTCCTCTTCC...TCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR TCA 90 bp GATTTTCCAGTGCAGTTTTGTAATAGCATGGAGCACAAGCACAAGACCTGTCTTTCCAGAGGAAACAGTTaGGGTAAGATAATGGGGGTA +
Preference number: 4 (lower is better)
Translates to: DFPVQFCNSMEHKHKTCLSRGNS*GKIMGV
Trigger: TACCCCCATTATCTTACCTCAACTGTTTCCTCTGGA...AAGACAGGTCTTGTGCTTGTGCTCCATGCTATTACAAAACTGCACTGGAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR TCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACATCCAGAGGAAACAGTTaGGGTAAGATAATGGGGGTA +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTSRGNS*GKIMGV
Trigger: TACCCCCATTATCTTACCTCAACTGTTTCCTCTGGA...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp ACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGATCCAGAGGAAACAGTTaGGGTAAGATAATGGGGGTA +
Preference number: 4 (lower is better)
Translates to: TCSSDSTKTAVSKDKNFRSRGNS*GKIMGV
Trigger: TACCCCCATTATCTTACCTCAACTGTTTCCTCTGGA...TCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp TGGAGCACAAGCACAAGACCTGTCTTTATTAGACACAGAGGATTCGTTCACCCATCACCCAGTTTTATCTaGAACAATGGAAGGATAGCA +
Preference number: 4 (lower is better)
Translates to: WSTSTRPVFIRHRGFVHPSPSFI*NNGRIA
Trigger: TGCTATCCTTCCATTGTTTCAGATAAAACTGGGTGA...TGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGGTCTTGTGCTTGTGCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp CTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGGACACCTTGCTCATCATaGTGCTGTAATGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: LSLLDTEDSFTQFYLKQWTPCSS*CCNAAG
Trigger: ACCCGCTGCATTACAGCAGCATGATGAGCAAGGTGT...CCATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp GATTTTCCAGTGCAGTTTTGTAATAGCATGGAGCACAAGCACAAGACCTGTCTTCCCAGTCCAGAAACTTaGTCATCAGACTCCACTAAA +
Preference number: 4 (lower is better)
Translates to: DFPVQFCNSMEHKHKTCLPSPET*SSDSTK
Trigger: TTTAGTGGAGTCTGATGAGCAAGTTTCTGGACTGGG...AAGACAGGTCTTGTGCTTGTGCTCCATGCTATTACAAAACTGCACTGGAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR GCA 90 bp TGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACCCAGTCCAGAAACTTaGTCATCAGACTCCACTAAA +
Preference number: 4 (lower is better)
Translates to: CSSDSTKTAVSKDKNFRRPSPET*SSDSTK
Trigger: TTTAGTGGAGTCTGATGAGCAAGTTTCTGGACTGGG...TCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACCCCAGTCCAGAAACTTaGTCATCAGACTCCACTAAA +
Preference number: 4 (lower is better)
Translates to: SSDSTKTAVSKDKNFRRHPSPET*SSDSTK
Trigger: TTTAGTGGAGTCTGATGAGCAAGTTTCTGGACTGGG...GTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp ACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGACCCAGTCCAGAAACTTaGTCATCAGACTCCACTAAA +
Preference number: 4 (lower is better)
Translates to: TCSSDSTKTAVSKDKNFRPSPET*SSDSTK
Trigger: TTTAGTGGAGTCTGATGAGCAAGTTTCTGGACTGGG...TCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp CTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAACCCAGTCCAGAAACTTaGTCATCAGACTCCACTAAA +
Preference number: 4 (lower is better)
Translates to: LAHQTPLKLQSPRTKTSEPSPET*SSDSTK
Trigger: TTTAGTGGAGTCTGATGAGCAAGTTTCTGGACTGGG...TTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TATCTGAAACAATGGAAGGATAGCAATGCCTTACTACAATGCCGTTTAACTTATGGCCCTGTGTTTCTCTaGCAACTCAGCACTGACACC +
Preference number: 4 (lower is better)
Translates to: YLKQWKDSNALLQCRLTYGPVFL*QLSTDT
Trigger: GGTGTCAGTGCTGAGTTGGCAGAGAAACACAGGGCC...ATAAGTTAAACGGCATTGTAGTAAGGCATTGCTATCCTTCCATTGTTTCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TGGAGCACAAGCACAAGACCTGTCTTTATTAGACACAGAGGATTCGTTCACCCACATTTATCAAACCCTTaGGCACTCAAGCTTACTCAA +
Preference number: 4 (lower is better)
Translates to: WSTSTRPVFIRHRGFVHPHLSNP*ALKLTQ
Trigger: TTGAGTAAGCTTGAGTGCCCAAGGGTTTGATAAATG...TGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGGTCTTGTGCTTGTGCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553795.6
ENST00000616267.4
CDS-3UTR TCA 90 bp AAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCATCCAGAGGAAACAGTTaGGGTAAGATAATGGGGGTA +
Preference number: 4 (lower is better)
Translates to: KLAHQTPLKLQSPRTKTSSRGNS*GKIMGV
Trigger: TACCCCCATTATCTTACCTCAACTGTTTCCTCTGGA...TGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp GCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACTCACCCAGTTTTATCTaGAACAATGGAAGGATAGCA +
Preference number: 4 (lower is better)
Translates to: AHQTPLKLQSPRTKTSEDSPSFI*NNGRIA
Trigger: TGCTATCCTTCCATTGTTTCAGATAAAACTGGGTGA...GTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp CTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGGCGCTGCAGAACACCTTaGTCATCATGCTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: LSLLDTEDSFTQFYLKQWRCRTP*SSCCCN
Trigger: ATTACAGCAGCATGATGAGCAAGGTGTTCTGCAGCG...CCATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp CCTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGCGCTGCAGAACACCTTaGTCATCATGCTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: PVFIRHRGFVHPVLSETMRCRTP*SSCCCN
Trigger: ATTACAGCAGCATGATGAGCAAGGTGTTCTGCAGCG...CATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp CCTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGTCAGGAAGTTCACTATaGCGTAGAAAGCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: PVFIRHRGFVHPVLSETMSGSSL*RRKHPP
Trigger: TGGCGGATGCTTTCTACGGCATAGTGAACTTCCTGA...CATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR GCA 90 bp TATCTGAAACAATGGAAGGATAGCAATGCCTTACTACAATGCCGTTTAACTTATCTCCCAGCTCATCCATaGACAGGTTCTGCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: YLKQWKDSNALLQCRLTYLPAHP*TGSAGL
Trigger: TAACCCAGCAGAACCTGTGCATGGATGAGCTGGGAG...ATAAGTTAAACGGCATTGTAGTAAGGCATTGCTATCCTTCCATTGTTTCAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGGCTTATTGTGATTGGGTaGGGACAGGAGGACAGTCTT +
Preference number: 4 (lower is better)
Translates to: LSLLDTEDSFTQFYLKQWLIVIG*GQEDSL
Trigger: AAGACTGTCCTCCTGTCCCCACCCAATCACAATAAG...CCATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TATCTGAAACAATGGAAGGATAGCAATGCCTTACTACAATGCCGTTTAACTTATGTTACTCATCATCCTTaGGCTGGGACGGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: YLKQWKDSNALLQCRLTYVTHHP*AGTGFW
Trigger: CCAGAAACCCGTCCCAGCCCAAGGATGATGAGTAAC...ATAAGTTAAACGGCATTGTAGTAAGGCATTGCTATCCTTCCATTGTTTCAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TATCTGAAACAATGGAAGGATAGCAATGCCTTACTACAATGCCGTTTAACTTATTCAGACCAAGAGATCTaGTGTCTCAGAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: YLKQWKDSNALLQCRLTYSDQEI*CLRGWW
Trigger: CCACCAGCCTCTGAGACACCAGATCTCTTGGTCTGA...ATAAGTTAAACGGCATTGTAGTAAGGCATTGCTATCCTTCCATTGTTTCAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAATTTTTGAAGTCCAAGTaGCTCCAGAGGAAACAGTTG +
Preference number: 4 (lower is better)
Translates to: LAHQTPLKLQSPRTKTSEFLKSK*LQRKQL
Trigger: CAACTGTTTCCTCTGGAGCCACTTGGACTTCAAAAA...TTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACTTTTTGAAGTCCAAGTaGCTCCAGAGGAAACAGTTG +
Preference number: 4 (lower is better)
Translates to: SSDSTKTAVSKDKNFRRHFLKSK*LQRKQL
Trigger: CAACTGTTTCCTCTGGAGCCACTTGGACTTCAAAAA...GTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACATTTTTGAAGTCCAAGTaGCTCCAGAGGAAACAGTTG +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTFLKSK*LQRKQL
Trigger: CAACTGTTTCCTCTGGAGCCACTTGGACTTCAAAAA...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp TATCTGAAACAATGGAAGGATAGCAATGCCTTACTACAATGCCGTTTAACTTATATTAGAGCTGACTCATaGCAGCTGTCCTCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: YLKQWKDSNALLQCRLTYIRADS*QLSSLQ
Trigger: CTGGAGCGAGGACAGCTGCCATGAGTCAGCTCTAAT...ATAAGTTAAACGGCATTGTAGTAAGGCATTGCTATCCTTCCATTGTTTCAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp CTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGGGGAAGAGGAAACAGCTaGATAAGAACACCCGGTATT +
Preference number: 4 (lower is better)
Translates to: LSLLDTEDSFTQFYLKQWGRGNS*IRTPGI
Trigger: AATACCGGGTGTTCTTATTCAGCTGTTTCCTCTTCC...CCATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp TCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACTGTTTGATGTGGCTATaGGTTGAAAACACAAGGAAC +
Preference number: 4 (lower is better)
Translates to: SSDSTKTAVSKDKNFRRHCLMWL*VENTRN
Trigger: GTTCCTTGTGTTTTCAACTCATAGCCACATCAAACA...GTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp CTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAATGTTTGATGTGGCTATaGGTTGAAAACACAAGGAAC +
Preference number: 4 (lower is better)
Translates to: LAHQTPLKLQSPRTKTSECLMWL*VENTRN
Trigger: GTTCCTTGTGTTTTCAACTCATAGCCACATCAAACA...TTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp GAAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCTTAGACCCACACAGCTaGATTCTAGGTGTGATTTTA +
Preference number: 4 (lower is better)
Translates to: ETCSSDSTKTAVSKDKNFLDPHS*ILGVIL
Trigger: TAAAATCACACCTAGAATTCAGCTGTGTGGGTCTAA...GAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp TCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAAGTTAGACCCACACAGCTaGATTCTAGGTGTGATTTTA +
Preference number: 4 (lower is better)
Translates to: SDSTKTAVSKDKNFRRHKLDPHS*ILGVIL
Trigger: TAAAATCACACCTAGAATTCAGCTGTGTGGGTCTAA...CTTGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp GCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACAAATCAAACTATTTTTaGAGTCCAAGTGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: AHQTPLKLQSPRTKTSEDKSNYF*SPSGSR
Trigger: TCTGGAGCCACTTGGACTTCAAAAATAGTTTGATTT...GTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp TCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACTCACCCAGTTTTATCTaGAACAATGGAAGGATAGCA +
Preference number: 4 (lower is better)
Translates to: SSDSTKTAVSKDKNFRRHSPSFI*NNGRIA
Trigger: TGCTATCCTTCCATTGTTTCAGATAAAACTGGGTGA...GTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp TGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGATCACCCAGTTTTATCTaGAACAATGGAAGGATAGCA +
Preference number: 4 (lower is better)
Translates to: CSSDSTKTAVSKDKNFRRSPSFI*NNGRIA
Trigger: TGCTATCCTTCCATTGTTTCAGATAAAACTGGGTGA...TCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp AAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAATCCACAGCTTCATGTaGTTTCAGAGCCACTTATTG +
Preference number: 4 (lower is better)
Translates to: KLAHQTPLKLQSPRTKTSIHSFM*FQSHLL
Trigger: CAATAAGTGGCTCTGAAATCACATGAAGCTGTGGAT...TGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp GCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACCATTTATCAAACCCTTaGGCACTCAAGCTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: AHQTPLKLQSPRTKTSEDHLSNP*ALKLLK
Trigger: TTTAAGAAGCTTGAGTGCCCAAGGGTTTGATAAATG...GTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR CCA 90 bp TATCTGAAACAATGGAAGGATAGCAATGCCTTACTACAATGCCGTTTAACTTATGCACTGACACCACCTTaGAGTCAGACCAAGAGATCT +
Preference number: 4 (lower is better)
Translates to: YLKQWKDSNALLQCRLTYALTPP*SQTKRS
Trigger: AGATCTCTTGGTCTGACTCCAAGGTGGTGTCAGTGC...ATAAGTTAAACGGCATTGTAGTAAGGCATTGCTATCCTTCCATTGTTTCAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp AAGCCATGTTTATTGGAAAGTGAGACCACTGAGGGTTTCAACATGTTATTTGGGTTTTTGAAGTCCAAGTaGCTCCAGAGGAAACAGTTG +
Preference number: 4 (lower is better)
Translates to: KPCLLESETTEGFNMLFGFLKSK*LQRKQL
Trigger: CAACTGTTTCCTCTGGAGCCACTTGGACTTCAAAAA...CCCAAATAACATGTTGAAACCCTCAGTGGTCTCACTTTCCAATAAACATGGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR CCA 90 bp AAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCATTTTTGAAGTCCAAGTaGCTCCAGAGGAAACAGTTG +
Preference number: 4 (lower is better)
Translates to: KLAHQTPLKLQSPRTKTSFLKSK*LQRKQL
Trigger: CAACTGTTTCCTCTGGAGCCACTTGGACTTCAAAAA...TGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp ACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGTTTTGTAATAGCATaGAGCACAAGCACAAGACCT +
Preference number: 4 (lower is better)
Translates to: TCSSDSTKTAVSKDKNFRSFVIA*STSTRP
Trigger: AGGTCTTGTGCTTGTGCTCCATGCTATTACAAAACT...TCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR TCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACATTCACCTTTGTAGAGTaGACAGACTTTATGTATAGC +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTFTFVE*TDFMYS
Trigger: GCTATACATAAAGTCTGTTCACTCTACAAAGGTGAA...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR TCA 90 bp AAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCATTAGACCCACACAGCTaGATTCTAGGTGTGATTTTA +
Preference number: 4 (lower is better)
Translates to: KLAHQTPLKLQSPRTKTSLDPHS*ILGVIL
Trigger: TAAAATCACACCTAGAATTCAGCTGTGTGGGTCTAA...TGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp GAAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAAATCAAACTATTTTTaGAGTCCAAGTGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: ETCSSDSTKTAVSKDKNFKSNYF*SPSGSR
Trigger: TCTGGAGCCACTTGGACTTCAAAAATAGTTTGATTT...GAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp CTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAAAATCAAACTATTTTTaGAGTCCAAGTGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LAHQTPLKLQSPRTKTSEKSNYF*SPSGSR
Trigger: TCTGGAGCCACTTGGACTTCAAAAATAGTTTGATTT...TTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAAATGAGAATACTGGATaGAGAACCATCCCATCTAAA +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTNENTG*RTIPSK
Trigger: TTTAGATGGGATGGTTCTTCATCCAGTATTCTCATT...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR CCA 90 bp TATCTGAAACAATGGAAGGATAGCAATGCCTTACTACAATGCCGTTTAACTTATAGCCATAGGACGCGATaGTCATCAGGAAGTTCACTA +
Preference number: 4 (lower is better)
Translates to: YLKQWKDSNALLQCRLTYSHRTR*SSGSSL
Trigger: TAGTGAACTTCCTGATGACCATCGCGTCCTATGGCT...ATAAGTTAAACGGCATTGTAGTAAGGCATTGCTATCCTTCCATTGTTTCAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGGCATTTATCAAACCCTTaGGCACTCAAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LSLLDTEDSFTQFYLKQWHLSNP*ALKLLK
Trigger: CTTCAGAAGCTTGAGTGCCCAAGGGTTTGATAAATG...CCATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536058.1
ENST00000612185.1
CDS-3UTR TCA 90 bp CCTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGTGTTTGATGTGGCTATaGGTTGAAAACACAAGGAAC +
Preference number: 4 (lower is better)
Translates to: PVFIRHRGFVHPVLSETMCLMWL*VENTRN
Trigger: GTTCCTTGTGTTTTCAACTCATAGCCACATCAAACA...CATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp CCTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGTTAGACCCACACAGCTaGATTCTAGGTGTGATTTTA +
Preference number: 4 (lower is better)
Translates to: PVFIRHRGFVHPVLSETMLDPHS*ILGVIL
Trigger: TAAAATCACACCTAGAATTCAGCTGTGTGGGTCTAA...CATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR TCA 90 bp AAGCCATGTTTATTGGAAAGTGAGACCACTGAGGGTTTCAACATGTTATTTGGGAAATCAAACTATTTTTaGAGTCCAAGTGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: KPCLLESETTEGFNMLFGKSNYF*SPSGSR
Trigger: TCTGGAGCCACTTGGACTTCAAAAATAGTTTGATTT...CCCAAATAACATGTTGAAACCCTCAGTGGTCTCACTTTCCAATAAACATGGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR CCA 90 bp TCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACGTCTTCTCAATCAACTaGTCAATAATGAGATCAAAG +
Preference number: 4 (lower is better)
Translates to: SSDSTKTAVSKDKNFRRHVFSIN*SIMRSK
Trigger: CTTTGATCTCATTATTGACCAGTTGATTGAGAAGAC...GTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CCA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAGTCTTCTCAATCAACTaGTCAATAATGAGATCAAAG +
Preference number: 4 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTVFSIN*SIMRSK
Trigger: CTTTGATCTCATTATTGACCAGTTGATTGAGAAGAC...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
3UTR CAA 72 bp TGGAAAGTGAGACCACTGAGGGTTTCAACATGTTATTaGGGACTCAGAATTCACTTAGAAGAGATTAAACTG +
Preference number: 4 (lower is better)
Translates to: WKVRPLRVSTCY*GLRIHLEEIKL
Trigger: CAGTTTAATCTCTTCTAAGTGAATTCTGAGTCCCAAATAACATGTTGAAACCCTCAGTGGTCTCACTTTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR CCA 90 bp TTGGAAAGTGAGACCACTGAGGGTTTCAACATGTTATTTGGGACTCAGAATTCAGTCTTCTCAATCAACTaGTCAATAATGAGATCAAAG +
Preference number: 4 (lower is better)
Translates to: LESETTEGFNMLFGTQNSVFSIN*SIMRSK
Trigger: CTTTGATCTCATTATTGACCAGTTGATTGAGAAGAC...TGAATTCTGAGTCCCAAATAACATGTTGAAACCCTCAGTGGTCTCACTTTCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR TCA 90 bp TATCTGAAACAATGGAAGGATAGCAATGCCTTACTACAATGCCGTTTAACTTATTTAGACCCACACAGCTaGATTCTAGGTGTGATTTTA +
Preference number: 4 (lower is better)
Translates to: YLKQWKDSNALLQCRLTYLDPHS*ILGVIL
Trigger: TAAAATCACACCTAGAATTCAGCTGTGTGGGTCTAA...ATAAGTTAAACGGCATTGTAGTAAGGCATTGCTATCCTTCCATTGTTTCAGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS TCA 90 bp CACAGAAATCCAAGCGCAGCATCAGCCCCGTGTGGATGGCCGTGTTaGCGGCGCAGAGCAGCCACACGGCTGTGGCCAGCCCGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: HRNPSAASAPCGWPC*RRRAATRLWPARCR
Trigger: TCTGCAGCGGGCTGGCCACAGCCGTGTGGCTGCTCTGCGCCGTCAACACGGCCATCCACACGGGGCTGATGCTGCGCTTGGATTTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CAA 90 bp AGCTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTGTGTGGATGGCCGTGTaGACGGCGCAGAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: SFSLTTLQGLWGPQFCLTVWMAV*TAQSSH
Trigger: GTGGCTGCTCTGCGCCGTCAACACGGCCATCCACAC...AGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS GCA 90 bp AGGACTCAGCACAGTGTACAGCAGGCCAGCCAACTTGCTCTTCCCTaGGCTGTAGCCAGAGACCGGGCTTATGTAGGCGTAGAAGACAGC +
Preference number: 5 (lower is better)
Translates to: RTQHSVQQASQLALP*AVARDRAYVGVEDS
Trigger: GCTGTCTTCTACGCCTACATAAGCCCGGTCTCTGGCTACAGCGCAGGGAAGAGCAAGTTGGCTGGCCTGCTGTACACTGTGCTGAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS TCA 90 bp TCTGCCTCCCCCAGGCAGTCTTCACCTTCAGGATGCTGGAGACGATaGAGCCATAGGACGCGATGGTCATCAGGAAGTTCACTATGCCGT +
Preference number: 5 (lower is better)
Translates to: SASPRQSSPSGCWRR*SHRTRWSSGSSLCR
Trigger: ACGGCATAGTGAACTTCCTGATGACCATCGCGTCCTATGGCTTCATCGTCTCCAGCATCCTGAAGGTGAAGACTGCCTGGGGGAGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS CCA 90 bp GGGTGCTCCGAAAAGCCCTGCAGGATGAACTCGGTTACCAACGTCTaGTTACTCATCATCCTTGGGCTGGGACGGGTTTCTGGGACTATC +
Preference number: 5 (lower is better)
Translates to: GCSEKPCRMNSVTNV*LLIILGLGRVSGTI
Trigger: GATAGTCCCAGAAACCCGTCCCAGCCCAAGGATGATGAGTAACCAGACGTTGGTAACCGAGTTCATCCTGCAGGGCTTTTCGGAGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CAA 90 bp CTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTTAGACTGGCCAGCGCCTaGGGCATGATGGAAGAGGTG +
Preference number: 5 (lower is better)
Translates to: LQSDNPSGAVGSTILPNFRLASA*GMMEEV
Trigger: CACCTCTTCCATCATGCCCAAGGCGCTGGCCAGTCT...AAAGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS CCA 90 bp CTGCAGGATGAACTCGGTTACCAACGTCTGGTTACTCATCATCCTTaGGCTGGGACGGGTTTCTGGGACTATCAGGTGACTCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: LQDELGYQRLVTHHP*AGTGFWDYQVTLHP
Trigger: TGGATGGAGAGTCACCTGATAGTCCCAGAAACCCGTCCCAGCCCAAGGATGATGAGTAACCAGACGTTGGTAACCGAGTTCATCCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CAA 90 bp AGCTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTAGCACTGACACCACCTaGGAGTCAGACCAAGAGATC +
Preference number: 5 (lower is better)
Translates to: SFSLTTLQGLWGPQFCLTSTDTT*ESDQEI
Trigger: GATCTCTTGGTCTGACTCCAAGGTGGTGTCAGTGCT...AGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CAA 90 bp GCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACGCGTGGAGCCCAGGGTaGAACGTGATGGCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: AHQTPLKLQSPRTKTSEDAWSPG*NVMAKV
Trigger: CACCTTGGCCATCACGTTCAACCCTGGGCTCCACGC...GTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CAA 90 bp GAAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCGTGTGGATGGCCGTGTaGACGGCGCAGAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: ETCSSDSTKTAVSKDKNFVWMAV*TAQSSH
Trigger: GTGGCTGCTCTGCGCCGTCAACACGGCCATCCACAC...GAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CAA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAGCGTGGAGCCCAGGGTaGAACGTGATGGCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTAWSPG*NVMAKV
Trigger: CACCTTGGCCATCACGTTCAACCCTGGGCTCCACGC...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CAA 90 bp TCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAAGGCGTGGAGCCCAGGGTaGAACGTGATGGCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: SDSTKTAVSKDKNFRRHKAWSPG*NVMAKV
Trigger: CACCTTGGCCATCACGTTCAACCCTGGGCTCCACGC...CTTGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CAA 90 bp TCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACGCGTGGAGCCCAGGGTaGAACGTGATGGCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: SSDSTKTAVSKDKNFRRHAWSPG*NVMAKV
Trigger: CACCTTGGCCATCACGTTCAACCCTGGGCTCCACGC...GTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CAA 90 bp GAAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCGCGTGGAGCCCAGGGTaGAACGTGATGGCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: ETCSSDSTKTAVSKDKNFAWSPG*NVMAKV
Trigger: CACCTTGGCCATCACGTTCAACCCTGGGCTCCACGC...GAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CAA 90 bp AAGCCATGTTTATTGGAAAGTGAGACCACTGAGGGTTTCAACATGTTATTTGGGGTGTGGATGGCCGTGTaGACGGCGCAGAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: KPCLLESETTEGFNMLFGVWMAV*TAQSSH
Trigger: GTGGCTGCTCTGCGCCGTCAACACGGCCATCCACAC...CCCAAATAACATGTTGAAACCCTCAGTGGTCTCACTTTCCAATAAACATGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR CAA 90 bp AAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGTGTGGATGGCCGTGTaGACGGCGCAGAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: KLAHQTPLKLQSPRTKTSVWMAV*TAQSSH
Trigger: GTGGCTGCTCTGCGCCGTCAACACGGCCATCCACAC...TGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS GCA 90 bp CAGCTGAATAAGAACACCCGGTATTCTGGGTGCTCCGAAAAGCCCTaGAGGATGAACTCGGTTACCAACGTCTGGTTACTCATCATCCTT +
Preference number: 5 (lower is better)
Translates to: QLNKNTRYSGCSEKP*RMNSVTNVWLLIIL
Trigger: AAGGATGATGAGTAACCAGACGTTGGTAACCGAGTTCATCCTGCAGGGCTTTTCGGAGCACCCAGAATACCGGGTGTTCTTATTCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS CCA 90 bp TACCAACGTCTGGTTACTCATCATCCTTGGGCTGGGACGGGTTTCTaGGACTATCAGGTGACTCTCCATCCACAGCTTCATGTGATTTCA +
Preference number: 5 (lower is better)
Translates to: YQRLVTHHPWAGTGF*DYQVTLHPQLHVIS
Trigger: TGAAATCACATGAAGCTGTGGATGGAGAGTCACCTGATAGTCCCAGAAACCCGTCCCAGCCCAAGGATGATGAGTAACCAGACGTTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CAA 90 bp CTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAAGACTGGCCAGCGCCTaGGGCATGATGGAAGAGGTG +
Preference number: 5 (lower is better)
Translates to: LAHQTPLKLQSPRTKTSERLASA*GMMEEV
Trigger: CACCTCTTCCATCATGCCCAAGGCGCTGGCCAGTCT...TTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CAA 90 bp GAAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGACTGGCCAGCGCCTaGGGCATGATGGAAGAGGTG +
Preference number: 5 (lower is better)
Translates to: ETCSSDSTKTAVSKDKNFRLASA*GMMEEV
Trigger: CACCTCTTCCATCATGCCCAAGGCGCTGGCCAGTCT...GAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CAA 90 bp CATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACACAAGACTGGCCAGCGCCTaGGGCATGATGGAAGAGGTG +
Preference number: 5 (lower is better)
Translates to: HQTPLKLQSPRTKTSEDTRLASA*GMMEEV
Trigger: CACCTCTTCCATCATGCCCAAGGCGCTGGCCAGTCT...TGTGTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CAA 90 bp ACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACTGGCCAGCGCCTaGGGCATGATGGAAGAGGTG +
Preference number: 5 (lower is better)
Translates to: TCSSDSTKTAVSKDKNFRRLASA*GMMEEV
Trigger: CACCTCTTCCATCATGCCCAAGGCGCTGGCCAGTCT...TCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CAA 90 bp CCTGTCTTTATTAGACACAGAGGATTCGTTCACCCAGTTTTATCTGAAACAATGGTGTGGATGGCCGTGTaGACGGCGCAGAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: PVFIRHRGFVHPVLSETMVWMAV*TAQSSH
Trigger: GTGGCTGCTCTGCGCCGTCAACACGGCCATCCACAC...CATTGTTTCAGATAAAACTGGGTGAACGAATCCTCTGTGTCTAATAAAGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CAA 90 bp GCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACGGTTACTCATCATCCTaGGGCTGGGACGGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: AHQTPLKLQSPRTKTSEDGYSSS*GWDGFL
Trigger: CAGAAACCCGTCCCAGCCCAAGGATGATGAGTAACC...GTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CAA 90 bp GAAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCGGTTACTCATCATCCTaGGGCTGGGACGGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: ETCSSDSTKTAVSKDKNFGYSSS*GWDGFL
Trigger: CAGAAACCCGTCCCAGCCCAAGGATGATGAGTAACC...GAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CAA 90 bp TGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGAGGTTACTCATCATCCTaGGGCTGGGACGGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: CSSDSTKTAVSKDKNFRRGYSSS*GWDGFL
Trigger: CAGAAACCCGTCCCAGCCCAAGGATGATGAGTAACC...TCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS-3UTR CAA 90 bp CTTCAGTCTGACAACCCTTCAGGGGCTGTGGGGTCCACAATTCTGCCTAACTTTTCAAAGCCATGTTTATaGGAAAGTGAGACCACTGAG +
Preference number: 5 (lower is better)
Translates to: LQSDNPSGAVGSTILPNFSKPCL*ESETTE
Trigger: CTCAGTGGTCTCACTTTCCAATAAACATGGCTTTGA...AAAGTTAGGCAGAATTGTGGACCCCACAGCCCCTGAAGGGTTGTCAGACTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS GCA 90 bp GATTTCAGAGCTAGAGAGATAAACAAGAGGTGTCCTGAGGAAGGCTaGTCCCGTGTTTCTTCCACACCTCACATCACCACTTATTGTGAT +
Preference number: 5 (lower is better)
Translates to: DFRAREINKRCPEEG*SRVSSTPHITTYCD
Trigger: ATCACAATAAGTGGTGATGTGAGGTGTGGAAGAAACACGGGAGCAGCCTTCCTCAGGACACCTCTTGTTTATCTCTCTAGCTCTGAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374401.3
ENST00000615770.1
CDS-3UTR CAA 90 bp GAAACTTGCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGCACTGACACCACCTaGGAGTCAGACCAAGAGATC +
Preference number: 5 (lower is better)
Translates to: ETCSSDSTKTAVSKDKNFSTDTT*ESDQEI
Trigger: GATCTCTTGGTCTGACTCCAAGGTGGTGTCAGTGCT...GAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGCAAGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS-3UTR CAA 90 bp GCTCATCAGACTCCACTAAAACTGCAGTCTCCAAGGACAAAAACTTCAGAAGACAGAAACATGGTGACATaGAGGCAGTGTGCAACCTGT +
Preference number: 5 (lower is better)
Translates to: AHQTPLKLQSPRTKTSEDRNMVT*RQCATC
Trigger: ACAGGTTGCACACTGCCTCAATGTCACCATGTTTCT...GTCTTCTGAAGTTTTTGTCCTTGGAGACTGCAGTTTTAGTGGAGTCTGATGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR CAA 90 bp ACTGTCTGTAAGAATCTACGTGCCAAAGCTACAGTCAGCTACAATTCATCAAATGGTTACTCATCATCCTaGGGCTGGGACGGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: TVCKNLRAKATVSYNSSNGYSSS*GWDGFL
Trigger: CAGAAACCCGTCCCAGCCCAAGGATGATGAGTAACC...ATTTGATGAATTGTAGCTGACTGTAGCTTTGGCACGTAGATTCTTACAGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR CAA 90 bp ACTGTCTGTAAGAATCTACGTGCCAAAGCTACAGTCAGCTACAATTCATCAAATAGCACTGACACCACCTaGGAGTCAGACCAAGAGATC +
Preference number: 5 (lower is better)
Translates to: TVCKNLRAKATVSYNSSNSTDTT*ESDQEI
Trigger: GATCTCTTGGTCTGACTCCAAGGTGGTGTCAGTGCT...ATTTGATGAATTGTAGCTGACTGTAGCTTTGGCACGTAGATTCTTACAGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS-3UTR CAA 90 bp TATCTGAAACAATGGAAGGATAGCAATGCCTTACTACAATGCCGTTTAACTTATAGCACTGACACCACCTaGGAGTCAGACCAAGAGATC +
Preference number: 5 (lower is better)
Translates to: YLKQWKDSNALLQCRLTYSTDTT*ESDQEI
Trigger: GATCTCTTGGTCTGACTCCAAGGTGGTGTCAGTGCT...ATAAGTTAAACGGCATTGTAGTAAGGCATTGCTATCCTTCCATTGTTTCAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS TCA 72 bp CCAAGCGCAGCATCAGCCCCGTGTGGATGGCCGTGTTaGCGGCGCAGAGCAGCCACACGGCTGTGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: PSAASAPCGWPC*RRRAATRLWPA
Trigger: GGCTGGCCACAGCCGTGTGGCTGCTCTGCGCCGTCAACACGGCCATCCACACGGGGCTGATGCTGCGCTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS CAA 72 bp TCCAAGCGCAGCATCAGCCCCGTGTGGATGGCCGTGTaGACGGCGCAGAGCAGCCACACGGCTGTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: SKRSISPVWMAV*TAQSSHTAVAS
Trigger: GCTGGCCACAGCCGTGTGGCTGCTCTGCGCCGTCAACACGGCCATCCACACGGGGCTGATGCTGCGCTTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS CAA 90 bp CCACAGAAATCCAAGCGCAGCATCAGCCCCGTGTGGATGGCCGTGTaGACGGCGCAGAGCAGCCACACGGCTGTGGCCAGCCCGCTGCAG +
Preference number: 6 (lower is better)
Translates to: PQKSKRSISPVWMAV*TAQSSHTAVASPLQ
Trigger: CTGCAGCGGGCTGGCCACAGCCGTGTGGCTGCTCTGCGCCGTCAACACGGCCATCCACACGGGGCTGATGCTGCGCTTGGATTTCTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS CCA 72 bp GGGCCACAGAAATCCAAGCGCAGCATCAGCCCCGTGTaGATGGCCGTGTTGACGGCGCAGAGCAGCCACACG +
Preference number: 6 (lower is better)
Translates to: GPQKSKRSISPV*MAVLTAQSSHT
Trigger: CGTGTGGCTGCTCTGCGCCGTCAACACGGCCATCCACACGGGGCTGATGCTGCGCTTGGATTTCTGTGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS TCA 72 bp CCCAGGCAGTCTTCACCTTCAGGATGCTGGAGACGATaGAGCCATAGGACGCGATGGTCATCAGGAAGTTCA +
Preference number: 6 (lower is better)
Translates to: PRQSSPSGCWRR*SHRTRWSSGSS
Trigger: TGAACTTCCTGATGACCATCGCGTCCTATGGCTTCATCGTCTCCAGCATCCTGAAGGTGAAGACTGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS CCA 72 bp CGGTTACCAACGTCTGGTTACTCATCATCCTTGGGCTaGGACGGGTTTCTGGGACTATCAGGTGACTCTCCA +
Preference number: 6 (lower is better)
Translates to: RLPTSGYSSSLG*DGFLGLSGDSP
Trigger: TGGAGAGTCACCTGATAGTCCCAGAAACCCGTCCCAGCCCAAGGATGATGAGTAACCAGACGTTGGTAACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS CAA 72 bp ATGGAGCTCTCTTCCGACACCAGACTGGCCAGCGCCTaGGGCATGATGGAAGAGGTGCAGATAATGTCCATA +
Preference number: 6 (lower is better)
Translates to: MELSSDTRLASA*GMMEEVQIMSI
Trigger: TATGGACATTATCTGCACCTCTTCCATCATGCCCAAGGCGCTGGCCAGTCTGGTGTCGGAAGAGAGCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS GCA 72 bp AAGAACACCCGGTATTCTGGGTGCTCCGAAAAGCCCTaGAGGATGAACTCGGTTACCAACGTCTGGTTACTC +
Preference number: 6 (lower is better)
Translates to: KNTRYSGCSEKP*RMNSVTNVWLL
Trigger: GAGTAACCAGACGTTGGTAACCGAGTTCATCCTGCAGGGCTTTTCGGAGCACCCAGAATACCGGGTGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS CCA 72 bp CTGGTTACTCATCATCCTTGGGCTGGGACGGGTTTCTaGGACTATCAGGTGACTCTCCATCCACAGCTTCAT +
Preference number: 6 (lower is better)
Translates to: LVTHHPWAGTGF*DYQVTLHPQLH
Trigger: ATGAAGCTGTGGATGGAGAGTCACCTGATAGTCCCAGAAACCCGTCCCAGCCCAAGGATGATGAGTAACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS CCA 72 bp GAAAAGCCCTGCAGGATGAACTCGGTTACCAACGTCTaGTTACTCATCATCCTTGGGCTGGGACGGGTTTCT +
Preference number: 6 (lower is better)
Translates to: EKPCRMNSVTNV*LLIILGLGRVS
Trigger: AGAAACCCGTCCCAGCCCAAGGATGATGAGTAACCAGACGTTGGTAACCGAGTTCATCCTGCAGGGCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS GCA 72 bp GCTAGAGAGATAAACAAGAGGTGTCCTGAGGAAGGCTaGTCCCGTGTTTCTTCCACACCTCACATCACCACT +
Preference number: 6 (lower is better)
Translates to: AREINKRCPEEG*SRVSSTPHITT
Trigger: AGTGGTGATGTGAGGTGTGGAAGAAACACGGGAGCAGCCTTCCTCAGGACACCTCTTGTTTATCTCTCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374401.3
ENST00000615770.1
CDS GCA 72 bp AGGAAACAGCTGAATAAGAACACCCGGTATTCTGGGTaGTCCGAAAAGCCCTGCAGGATGAACTCGGTTACC +
Preference number: 6 (lower is better)
Translates to: RKQLNKNTRYSG*SEKPCRMNSVT
Trigger: GGTAACCGAGTTCATCCTGCAGGGCTTTTCGGAGCACCCAGAATACCGGGTGTTCTTATTCAGCTGTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000615770.1
ENST00000616267.4
CDS CCA 72 bp CTTCCACACCTCACATCACCACTTATTGTGATTGGGTaGGGACAGGAGGACAGTCTTCTCAATCAACTGGTC +
Preference number: 6 (lower is better)
Translates to: LPHLTSPLIVIG*GQEDSLLNQLV
Trigger: GACCAGTTGATTGAGAAGACTGTCCTCCTGTCCCCACCCAATCACAATAAGTGGTGATGTGAGGTGTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS CAA 90 bp GTCCTCTCTCTGCCAAGCACAACTGAGGGTAGAAACATGGTGACATaGAGGCAGTGTGCAACCTGTGATAAGATCAGTCTGAACAGGACT +
Preference number: 6 (lower is better)
Translates to: VLSLPSTTEGRNMVT*RQCATCDKISLNRT
Trigger: AGTCCTGTTCAGACTGATCTTATCACAGGTTGCACACTGCCTCAATGTCACCATGTTTCTACCCTCAGTTGTGCTTGGCAGAGAGAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS CAA 72 bp CTGCCAAGCACAACTGAGGGTAGAAACATGGTGACATaGAGGCAGTGTGCAACCTGTGATAAGATCAGTCTG +
Preference number: 6 (lower is better)
Translates to: LPSTTEGRNMVT*RQCATCDKISL
Trigger: CAGACTGATCTTATCACAGGTTGCACACTGCCTCAATGTCACCATGTTTCTACCCTCAGTTGTGCTTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS CCA 72 bp TTGGGTGGGGACAGGAGGACAGTCTTCTCAATCAACTaGTCAATAATGAGATCAAAGAATCGGGGCTCCAAT +
Preference number: 6 (lower is better)
Translates to: LGGDRRTVFSIN*SIMRSKNRGSN
Trigger: ATTGGAGCCCCGATTCTTTGATCTCATTATTGACCAGTTGATTGAGAAGACTGTCCTCCTGTCCCCACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374401.3
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS CCA 72 bp GTTTCTTCCACACCTCACATCACCACTTATTGTGATTaGGTGGGGACAGGAGGACAGTCTTCTCAATCAACT +
Preference number: 6 (lower is better)
Translates to: VSSTPHITTYCD*VGTGGQSSQST
Trigger: AGTTGATTGAGAAGACTGTCCTCCTGTCCCCACCCAATCACAATAAGTGGTGATGTGAGGTGTGGAAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374401.3
CDS CCA 72 bp CTTCATGTGATTTCAGAGCCACTTATTGTGATTGGGTaGGGACAGGAGGACAGTCTTCTCAATCAACTGGTC +
Preference number: 6 (lower is better)
Translates to: LHVISEPLIVIG*GQEDSLLNQLV
Trigger: GACCAGTTGATTGAGAAGACTGTCCTCCTGTCCCCACCCAATCACAATAAGTGGCTCTGAAATCACATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4
CDS CCA 72 bp ACAGCTTCATGTGATTTCAGAGCCACTTATTGTGATTaGGTGGGGACAGGAGGACAGTCTTCTCAATCAACT +
Preference number: 6 (lower is better)
Translates to: TASCDFRATYCD*VGTGGQSSQST
Trigger: AGTTGATTGAGAAGACTGTCCTCCTGTCCCCACCCAATCACAATAAGTGGCTCTGAAATCACATGAAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536058.1
ENST00000553795.6
ENST00000612185.1
ENST00000616267.4