RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR12D3 (Homo sapiens)

Ensembl gene IDs: ENSG00000112462, ENSG00000204692

Ensembl transcript IDs: ENST00000383556.7, ENST00000396806.3, ENST00000430148.5, ENST00000502578.5, ENST00000505384.5, ENST00000508665.5, ENST00000550681.1, ENST00000550913.1, ENST00000551240.1, ENST00000552012.1, ENST00000552446.1

Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTATCCTaGCATATGTACTTACGCGTTTGGTTATTTGGGGCCTCCATCACA +
Preference number: 1 (lower is better)
Translates to: PILPTSLVLLATELS*HMYLRVWLFGASIT
Trigger: TGTGATGGAGGCCCCAAATAACCAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
3UTR GCA 90 bp TCCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTaGCACCGAATTATCCTGACATATGTACTTACGCGTTTGGTTATT +
Preference number: 1 (lower is better)
Translates to: SYSNPPHTSYLLSSP*HRIILTYVLTRLVI
Trigger: AATAACCAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
3UTR-3UTR TCA 90 bp CAGCAGATTCCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTATCCTaGCATATGTACTTACGCGTT +
Preference number: 2 (lower is better)
Translates to: QQIPTLTLPILPTSLVLLATELS*HMYLRV
Trigger: AACGCGTAAGTACATATGTCAGGATAATTCGGTGGC...AAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGGAATCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
3UTR-3UTR CCA 90 bp TACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTATGTACTTACGCGTTTaGTTATTTGGGGCCTCCATC +
Preference number: 2 (lower is better)
Translates to: YSNPPHTSYLLSSPCHRIMYLRV*LFGASI
Trigger: GATGGAGGCCCCAAATAACCAAACGCGTAAGTACAT...AATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
3UTR-3UTR CCA 90 bp TACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTACGCGTTTGGTTATTTaGGGCCTCCATCACATTAAA +
Preference number: 2 (lower is better)
Translates to: YSNPPHTSYLLSSPCHRITRLVI*GLHHIK
Trigger: TTTAATGTGATGGAGGCCCCAAATAACCAAACGCGT...AATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
3UTR-3UTR TCA 90 bp GTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGGCCACCGAATTATCCTaGCATATGTACTTACGCGTT +
Preference number: 2 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMATELS*HMYLRV
Trigger: AACGCGTAAGTACATATGTCAGGATAATTCGGTGGC...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
3UTR-3UTR TCA 90 bp GTGCAAACACTCCAACTAAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGGCCACCGAATTATCCTaGCATATGTACTTACGCGTT +
Preference number: 2 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMATELS*HMYLRV
Trigger: AACGCGTAAGTACATATGTCAGGATAATTCGGTGGC...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTTAGTTGGAGTGTTTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383556.7
ENST00000502578.5
ENST00000550681.1
ENST00000551240.1
3UTR-3UTR CCA 90 bp GTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGACGCGTTTGGTTATTTaGGGCCTCCATCACATTAAA +
Preference number: 2 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMTRLVI*GLHHIK
Trigger: TTTAATGTGATGGAGGCCCCAAATAACCAAACGCGT...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
3UTR-3UTR CCA 90 bp GTGCAAACACTCCAACTAAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGATGTACTTACGCGTTTaGTTATTTGGGGCCTCCATC +
Preference number: 2 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMMYLRV*LFGASI
Trigger: GATGGAGGCCCCAAATAACCAAACGCGTAAGTACAT...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTTAGTTGGAGTGTTTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383556.7
ENST00000502578.5
ENST00000550681.1
ENST00000551240.1
3UTR-3UTR TCA 90 bp GTGCAAACACTCCAACTAAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGTCAGTACATTCCTGCTaGAGGAAACACAAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMSVHSC*RKHKRK
Trigger: TTTCCTTTTGTGTTTCCTTCAGCAGGAATGTACTGA...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTTAGTTGGAGTGTTTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383556.7
ENST00000502578.5
ENST00000550681.1
ENST00000551240.1
3UTR-3UTR CCA 90 bp TCAAATTTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGATGTACTTACGCGTTTaGTTATTTGGGGCCTCCATC +
Preference number: 2 (lower is better)
Translates to: SNLNCANTPTETKSLSHWMYLRV*LFGASI
Trigger: GATGGAGGCCCCAAATAACCAAACGCGTAAGTACAT...CCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAAATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
3UTR-3UTR TCA 90 bp TCAAATTTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGTCAGTACATTCCTGCTaGAGGAAACACAAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: SNLNCANTPTETKSLSHWSVHSC*RKHKRK
Trigger: TTTCCTTTTGTGTTTCCTTCAGCAGGAATGTACTGA...CCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAAATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
3UTR-3UTR TCA 90 bp TTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATTCAGTACTTTCCTGCTaGAGGAAACACAAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: LNCANTPTETKSLSHWLNSVLSC*RKHKRK
Trigger: TTTCCTTTTGTGTTTCCTTCAGCAGGAAAGTACTGA...ATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396806.3
3UTR-3UTR CAA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTGCTCCTGTGTTTCTaGAACCTACTACACTGCCTA +
Preference number: 3 (lower is better)
Translates to: PTLTLPILPTSLVLLATELLLCF*NLLHCL
Trigger: TAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAA...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
3UTR-3UTR CAA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATATGTACTTACGCGTTaGGTTATTTGGGGCCTCCAT +
Preference number: 3 (lower is better)
Translates to: PTLTLPILPTSLVLLATEYVLTR*VIWGLH
Trigger: ATGGAGGCCCCAAATAACCAAACGCGTAAGTACATA...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
3UTR-3UTR CAA 90 bp CAGCAGATTCCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTTTGCTCCTGTGTTTCTaGAACCTACTACACTGCCTA +
Preference number: 3 (lower is better)
Translates to: QQIPTLTLPILPTSLVLLLLLCF*NLLHCL
Trigger: TAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAA...AAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGGAATCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
3UTR-3UTR CAA 90 bp CAGCAGATTCCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTTATGTACTTACGCGTTaGGTTATTTGGGGCCTCCAT +
Preference number: 3 (lower is better)
Translates to: QQIPTLTLPILPTSLVLLYVLTR*VIWGLH
Trigger: ATGGAGGCCCCAAATAACCAAACGCGTAAGTACATA...AAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGGAATCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
3UTR TCA 72 bp CCTACCTCCTTAGTTCTCCTTGCCACCGAATTATCCTaGCATATGTACTTACGCGTTTGGTTATTTGGGGCC +
Preference number: 3 (lower is better)
Translates to: PTSLVLLATELS*HMYLRVWLFGA
Trigger: GGCCCCAAATAACCAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAGGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
3UTR GCA 72 bp AACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTaGCACCGAATTATCCTGACATATGTACTTACGCGT +
Preference number: 3 (lower is better)
Translates to: NPPHTSYLLSSP*HRIILTYVLTR
Trigger: ACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
3UTR-3UTR CAA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAAATGACATTATGGAATTaGTTTTGCTTGCTCCTGTGT +
Preference number: 3 (lower is better)
Translates to: PTLTLPILPTSLVLLATEMTLWN*FCLLLC
Trigger: ACACAGGAGCAAGCAAAACAAATTCCATAATGTCAT...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
3UTR-3UTR CAA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGTTGCTCCTGTGTTTCTaGAACCTACTACACTGCCTA +
Preference number: 3 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLLLLCF*NLLHCL
Trigger: TAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAA...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
3UTR-3UTR CAA 90 bp GTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGTTGCTCCTGTGTTTCTaGAACCTACTACACTGCCTA +
Preference number: 3 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMLLLCF*NLLHCL
Trigger: TAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAA...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
3UTR-3UTR CAA 90 bp TACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTATGACATTATGGAATTaGTTTTGCTTGCTCCTGTGT +
Preference number: 3 (lower is better)
Translates to: YSNPPHTSYLLSSPCHRIMTLWN*FCLLLC
Trigger: ACACAGGAGCAAGCAAAACAAATTCCATAATGTCAT...AATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
3UTR-3UTR CAA 90 bp CAGCAGATTCCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTATGACATTATGGAATTaGTTTTGCTTGCTCCTGTGT +
Preference number: 3 (lower is better)
Translates to: QQIPTLTLPILPTSLVLLMTLWN*FCLLLC
Trigger: ACACAGGAGCAAGCAAAACAAATTCCATAATGTCAT...AAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGGAATCTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
3UTR-3UTR CAA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGATGACATTATGGAATTaGTTTTGCTTGCTCCTGTGT +
Preference number: 3 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLMTLWN*FCLLLC
Trigger: ACACAGGAGCAAGCAAAACAAATTCCATAATGTCAT...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
3UTR-3UTR CAA 90 bp TTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATTTGCTCCTGTGTTTCTaGAACCTACTACACTGCCTA +
Preference number: 3 (lower is better)
Translates to: LNCANTPTETKSLSHWLNLLLCF*NLLHCL
Trigger: TAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAA...ATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
3UTR-3UTR CAA 90 bp TCAAATTTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGATGACATTATGGAATTaGTTTTGCTTGCTCCTGTGT +
Preference number: 3 (lower is better)
Translates to: SNLNCANTPTETKSLSHWMTLWN*FCLLLC
Trigger: ACACAGGAGCAAGCAAAACAAATTCCATAATGTCAT...CCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAAATTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAAGCCATTATCCGGTCCTaGATCATGGAGGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: PTLTLPILPTSLVLLATEAIIRS*IMEVAE
Trigger: TTCAGCCACCTCCATGATTCAGGACCGGATAATGGC...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTAGCTGCTCAAAACACTaGGATGCCCCTCTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: YSNPPHTSYLLSSPCHRISCSKH*DAPLGW
Trigger: CCAGCCTAGAGGGGCATCTCAGTGTTTTGAGCAGCT...AATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383556.7
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
CDS-3UTR TCA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATCAGGTGTGCAGTCATaGCAGAATGCATCAGAGCGT +
Preference number: 4 (lower is better)
Translates to: PTLTLPILPTSLVLLATESGVQS*QNASER
Trigger: ACGCTCTGATGCATTCTGTCATGACTGCACACCTGA...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAAAGGCTGGTAACAGCGTaGCTTAGAATAAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PTLTLPILPTSLVLLATERLVTA*LRISPP
Trigger: TGGAGGACTTATTCTAAGTCACGCTGTTACCAGCCT...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383556.7
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
CDS-3UTR TCA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAACAGGACGAATATATGTaGAGCCCACAGGTCCATAGA +
Preference number: 4 (lower is better)
Translates to: PTLTLPILPTSLVLLATEQDEYM*SPQVHR
Trigger: TCTATGGACCTGTGGGCTTCACATATATTCGTCCTG...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CAGCAGATTCCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCATTATCCGGTCCTaGATCATGGAGGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: QQIPTLTLPILPTSLVLLAIIRS*IMEVAE
Trigger: TTCAGCCACCTCCATGATTCAGGACCGGATAATGGC...AAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGGAATCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTTCTCACCGAAAAATaGGCCTGTGGCAGCACAGTT +
Preference number: 4 (lower is better)
Translates to: PTLTLPILPTSLVLLATEFLTEK*ACGSTV
Trigger: AACTGTGCTGCCACAGGCCCATTTTTCGGTGAGAAA...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383556.7
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
CDS-3UTR CCA 90 bp TACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTGTGGACAGAGCCTTGTaGAGTATTCTGCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: YSNPPHTSYLLSSPCHRIVDRAL*SILQDL
Trigger: CAGGTCCTGCAGAATACTCCACAAGGCTCTGTCCAC...AATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAACCTGAATCATGGAGGTaGCTGAAGCAGGACGAATAT +
Preference number: 4 (lower is better)
Translates to: PTLTLPILPTSLVLLATEPESWR*LKQDEY
Trigger: ATATTCGTCCTGCTTCAGCCACCTCCATGATTCAGG...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAAAATCATGGAGGTGGCTaGAGCAGGACGAATATATGT +
Preference number: 4 (lower is better)
Translates to: PTLTLPILPTSLVLLATENHGGG*SRTNIC
Trigger: ACATATATTCGTCCTGCTTCAGCCACCTCCATGATT...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAAGCCACCGAATTATCCTaGCATATGTACTTACGCGTT +
Preference number: 4 (lower is better)
Translates to: PTLTLPILPTSLVLLATEATELS*HMYLRV
Trigger: AACGCGTAAGTACATATGTCAGGATAATTCGGTGGC...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CAGCAGATTCCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTAGGCTGGTAACAGCGTaGCTTAGAATAAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QQIPTLTLPILPTSLVLLRLVTA*LRISPP
Trigger: TGGAGGACTTATTCTAAGTCACGCTGTTACCAGCCT...AAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGGAATCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383556.7
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
CDS-3UTR TCA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAACGTAGAAGAAGTGATTaGGTTTCTGAGAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: PTLTLPILPTSLVLLATERRRSD*VSESHK
Trigger: TTTGTGGCTCTCAGAAACTCAATCACTTCTTCTACG...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CAGCAGATTCCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTCAGGACGAATATATGTaGAGCCCACAGGTCCATAGA +
Preference number: 4 (lower is better)
Translates to: QQIPTLTLPILPTSLVLLQDEYM*SPQVHR
Trigger: TCTATGGACCTGTGGGCTTCACATATATTCGTCCTG...AAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGGAATCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGGCCATTATCCGGTCCTaGATCATGGAGGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLAIIRS*IMEVAE
Trigger: TTCAGCCACCTCCATGATTCAGGACCGGATAATGGC...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR GCA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAAAGTGACATTCTCCATTaGTCACTCATCCACAAAGCT +
Preference number: 4 (lower is better)
Translates to: PTLTLPILPTSLVLLATESDILH*SLIHKA
Trigger: AGCTTTGTGGATGAGTGAGCAATGGAGAATGTCACT...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383556.7
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
CDS-3UTR CCA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGGTGGACAGAGCCTTGTaGAGTATTCTGCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLVDRAL*SILQDL
Trigger: CAGGTCCTGCAGAATACTCCACAAGGCTCTGTCCAC...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp TACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTCCTGAATCATGGAGGTaGCTGAAGCAGGACGAATAT +
Preference number: 4 (lower is better)
Translates to: YSNPPHTSYLLSSPCHRIPESWR*LKQDEY
Trigger: ATATTCGTCCTGCTTCAGCCACCTCCATGATTCAGG...AATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAAACGCGTTTGGTTATTTaGGGCCTCCATCACATTAAA +
Preference number: 4 (lower is better)
Translates to: PTLTLPILPTSLVLLATETRLVI*GLHHIK
Trigger: TTTAATGTGATGGAGGCCCCAAATAACCAAACGCGT...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAAAAAGAAGCCATTGATTaGGTAATGTGTCACTACAGG +
Preference number: 4 (lower is better)
Translates to: PTLTLPILPTSLVLLATEKEAID*VMCHYR
Trigger: CCTGTAGTGACACATTACTCAATCAATGGCTTCTTT...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CAGCAGATTCCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTTGGATATGCTGCCTGTaGCAATGGAAAGAAGCCATT +
Preference number: 4 (lower is better)
Translates to: QQIPTLTLPILPTSLVLLWICCL*QWKEAI
Trigger: AATGGCTTCTTTCCATTGTCACAGGCAGCATATCCA...AAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGGAATCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTTGGATATGCTGCCTGTaGCAATGGAAAGAAGCCATT +
Preference number: 4 (lower is better)
Translates to: YSNPPHTSYLLSSPCHRIWICCL*QWKEAI
Trigger: AATGGCTTCTTTCCATTGTCACAGGCAGCATATCCA...AATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTAATCATGGAGGTGGCTaGAGCAGGACGAATATATGT +
Preference number: 4 (lower is better)
Translates to: YSNPPHTSYLLSSPCHRINHGGG*SRTNIC
Trigger: ACATATATTCGTCCTGCTTCAGCCACCTCCATGATT...AATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTGCCACCGAATTATCCTaGCATATGTACTTACGCGTT +
Preference number: 4 (lower is better)
Translates to: YSNPPHTSYLLSSPCHRIATELS*HMYLRV
Trigger: AACGCGTAAGTACATATGTCAGGATAATTCGGTGGC...AATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATCAGTACATTCCTGCTaGAGGAAACACAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: PTLTLPILPTSLVLLATESVHSC*RKHKRK
Trigger: TTTCCTTTTGTGTTTCCTTCAGCAGGAATGTACTGA...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000383556.7
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR GCA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAAACAAAAACTCAGGTGTaGAGTCATGACAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: PTLTLPILPTSLVLLATETKTQV*SHDRMH
Trigger: ATGCATTCTGTCATGACTGCACACCTGAGTTTTTGT...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAAAAATACATAGGGGAGTaGAGTTGTGGTTCCAAAACA +
Preference number: 4 (lower is better)
Translates to: PTLTLPILPTSLVLLATEKYIGE*SCGSKT
Trigger: TGTTTTGGAACCACAACTCCACTCCCCTATGTATTT...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp CAGCAGATTCCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTATGTACTTACGCGTTTaGTTATTTGGGGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: QQIPTLTLPILPTSLVLLMYLRV*LFGASI
Trigger: GATGGAGGCCCCAAATAACCAAACGCGTAAGTACAT...AAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGGAATCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTCGTAGAAGAAGTGATTaGGTTTCTGAGAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: YSNPPHTSYLLSSPCHRIRRRSD*VSESHK
Trigger: TTTGTGGCTCTCAGAAACTCAATCACTTCTTCTACG...AATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CAGCAGATTCCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTCGTAGAAGAAGTGATTaGGTTTCTGAGAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: QQIPTLTLPILPTSLVLLRRRSD*VSESHK
Trigger: TTTGTGGCTCTCAGAAACTCAATCACTTCTTCTACG...AAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGGAATCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTATTCTAAGAGCGGCTTaGCATCGTAGAAGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: YSNPPHTSYLLSSPCHRIILRAA*HRRRSD
Trigger: ATCACTTCTTCTACGATGTCAAGCCGCTCTTAGAAT...AATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CAGCAGATTCCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTATTCTAAGAGCGGCTTaGCATCGTAGAAGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: QQIPTLTLPILPTSLVLLILRAA*HRRRSD
Trigger: ATCACTTCTTCTACGATGTCAAGCCGCTCTTAGAAT...AAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGGAATCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAAATGGAAAGAAGCCATTaGTTGAGTAATGTGTCACTA +
Preference number: 4 (lower is better)
Translates to: PTLTLPILPTSLVLLATEMERSH*LSNVSL
Trigger: TAGTGACACATTACTCAATCAATGGCTTCTTTCCAT...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGCAGGACGAATATATGTaGAGCCCACAGGTCCATAGA +
Preference number: 4 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLQDEYM*SPQVHR
Trigger: TCTATGGACCTGTGGGCTTCACATATATTCGTCCTG...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CAGCAGATTCCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTTGCAAACACTCCAACTaGAACAAAGAGCTTGTCACA +
Preference number: 4 (lower is better)
Translates to: QQIPTLTLPILPTSLVLLCKHSN*NKELVT
Trigger: TGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCA...AAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGGAATCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR GCA 90 bp TACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTAGTGACATTCTCCATTaGTCACTCATCCACAAAGCT +
Preference number: 4 (lower is better)
Translates to: YSNPPHTSYLLSSPCHRISDILH*SLIHKA
Trigger: AGCTTTGTGGATGAGTGAGCAATGGAGAATGTCACT...AATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383556.7
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
CDS-3UTR CCA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGTTTCTCACCGAAAAATaGGCCTGTGGCAGCACAGTT +
Preference number: 4 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLFLTEK*ACGSTV
Trigger: AACTGTGCTGCCACAGGCCCATTTTTCGGTGAGAAA...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383556.7
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
CDS-3UTR CCA 90 bp GTGCAAACACTCCAACTAAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGGTGGACAGAGCCTTGTaGAGTATTCTGCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMVDRAL*SILQDL
Trigger: CAGGTCCTGCAGAATACTCCACAAGGCTCTGTCCAC...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTTAGTTGGAGTGTTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383556.7
ENST00000502578.5
ENST00000550681.1
ENST00000551240.1
CDS-3UTR CCA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGCCTGAATCATGGAGGTaGCTGAAGCAGGACGAATAT +
Preference number: 4 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLPESWR*LKQDEY
Trigger: ATATTCGTCCTGCTTCAGCCACCTCCATGATTCAGG...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp CAGCAGATTCCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTACGCGTTTGGTTATTTaGGGCCTCCATCACATTAAA +
Preference number: 4 (lower is better)
Translates to: QQIPTLTLPILPTSLVLLTRLVI*GLHHIK
Trigger: TTTAATGTGATGGAGGCCCCAAATAACCAAACGCGT...AAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGGAATCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTAGCTGCTCAAAACACTaGGATGCCCCTCTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICSCSKH*DAPLGW
Trigger: CCAGCCTAGAGGGGCATCTCAGTGTTTTGAGCAGCT...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383556.7
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
CDS-3UTR TCA 90 bp TACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTAAAGAAGCCATTGATTaGGTAATGTGTCACTACAGG +
Preference number: 4 (lower is better)
Translates to: YSNPPHTSYLLSSPCHRIKEAID*VMCHYR
Trigger: CCTGTAGTGACACATTACTCAATCAATGGCTTCTTT...AATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGTGGATATGCTGCCTGTaGCAATGGAAAGAAGCCATT +
Preference number: 4 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLWICCL*QWKEAI
Trigger: AATGGCTTCTTTCCATTGTCACAGGCAGCATATCCA...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGCAGGACGAATATATGTaGAGCCCACAGGTCCATAGA +
Preference number: 4 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMQDEYM*SPQVHR
Trigger: TCTATGGACCTGTGGGCTTCACATATATTCGTCCTG...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGAATCATGGAGGTGGCTaGAGCAGGACGAATATATGT +
Preference number: 4 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLNHGGG*SRTNIC
Trigger: ACATATATTCGTCCTGCTTCAGCCACCTCCATGATT...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCTGCCATTATCCGGTCCTaGATCATGGAGGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LLAPVFLEPTTLPNIICAAIIRS*IMEVAE
Trigger: TTCAGCCACCTCCATGATTCAGGACCGGATAATGGC...AGCACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGGCCACCGAATTATCCTaGCATATGTACTTACGCGTT +
Preference number: 4 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLATELS*HMYLRV
Trigger: AACGCGTAAGTACATATGTCAGGATAATTCGGTGGC...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CAGCAGATTCCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTTCAGTACATTCCTGCTaGAGGAAACACAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: QQIPTLTLPILPTSLVLLSVHSC*RKHKRK
Trigger: TTTCCTTTTGTGTTTCCTTCAGCAGGAATGTACTGA...AAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGGAATCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000383556.7
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp CAGCAGATTCCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTAAATACATAGGGGAGTaGAGTTGTGGTTCCAAAACA +
Preference number: 4 (lower is better)
Translates to: QQIPTLTLPILPTSLVLLKYIGE*SCGSKT
Trigger: TGTTTTGGAACCACAACTCCACTCCCCTATGTATTT...AAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGGAATCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp TACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTAAATACATAGGGGAGTaGAGTTGTGGTTCCAAAACA +
Preference number: 4 (lower is better)
Translates to: YSNPPHTSYLLSSPCHRIKYIGE*SCGSKT
Trigger: TGTTTTGGAACCACAACTCCACTCCCCTATGTATTT...AATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp GTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGCCTGAATCATGGAGGTaGCTGAAGCAGGACGAATAT +
Preference number: 4 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMPESWR*LKQDEY
Trigger: ATATTCGTCCTGCTTCAGCCACCTCCATGATTCAGG...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGATGTACTTACGCGTTTaGTTATTTGGGGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLMYLRV*LFGASI
Trigger: GATGGAGGCCCCAAATAACCAAACGCGTAAGTACAT...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCTTCAGGTGTGCAGTCATaGCAGAATGCATCAGAGCGT +
Preference number: 4 (lower is better)
Translates to: LLAPVFLEPTTLPNIICASGVQS*QNASER
Trigger: ACGCTCTGATGCATTCTGTCATGACTGCACACCTGA...AGCACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGCGTAGAAGAAGTGATTaGGTTTCTGAGAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLRRRSD*VSESHK
Trigger: TTTGTGGCTCTCAGAAACTCAATCACTTCTTCTACG...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGATTCTAAGAGCGGCTTaGCATCGTAGAAGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLILRAA*HRRRSD
Trigger: ATCACTTCTTCTACGATGTCAAGCCGCTCTTAGAAT...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTATGGAAAGAAGCCATTaGTTGAGTAATGTGTCACTA +
Preference number: 4 (lower is better)
Translates to: YSNPPHTSYLLSSPCHRIMERSH*LSNVSL
Trigger: TAGTGACACATTACTCAATCAATGGCTTCTTTCCAT...AATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CAGCAGATTCCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTATGGAAAGAAGCCATTaGTTGAGTAATGTGTCACTA +
Preference number: 4 (lower is better)
Translates to: QQIPTLTLPILPTSLVLLMERSH*LSNVSL
Trigger: TAGTGACACATTACTCAATCAATGGCTTCTTTCCAT...AAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGGAATCTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTGCAAACACTCCAACTAAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGCAGGACGAATATATGTaGAGCCCACAGGTCCATAGA +
Preference number: 4 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMQDEYM*SPQVHR
Trigger: TCTATGGACCTGTGGGCTTCACATATATTCGTCCTG...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTTAGTTGGAGTGTTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383556.7
ENST00000502578.5
ENST00000550681.1
ENST00000551240.1
CDS-3UTR TCA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCCATTATCCGGTCCTaGATCATGGAGGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICAIIRS*IMEVAE
Trigger: TTCAGCCACCTCCATGATTCAGGACCGGATAATGGC...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp GTGCAAACACTCCAACTAAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGAGGGGAGTGGAGTTGTaGTTCCAAAACAACCATCAC +
Preference number: 4 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMRGVEL*FQNNHH
Trigger: GTGATGGTTGTTTTGGAACCACAACTCCACTCCCCT...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTTAGTTGGAGTGTTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383556.7
ENST00000502578.5
ENST00000550681.1
ENST00000551240.1
CDS-3UTR CCA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGTGGACAGAGCCTTGTaGAGTATTCTGCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICVDRAL*SILQDL
Trigger: CAGGTCCTGCAGAATACTCCACAAGGCTCTGTCCAC...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp GTGCAAACACTCCAACTAAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGCCTGAATCATGGAGGTaGCTGAAGCAGGACGAATAT +
Preference number: 4 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMPESWR*LKQDEY
Trigger: ATATTCGTCCTGCTTCAGCCACCTCCATGATTCAGG...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTTAGTTGGAGTGTTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383556.7
ENST00000502578.5
ENST00000550681.1
ENST00000551240.1
CDS-3UTR CCA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGACGCGTTTGGTTATTTaGGGCCTCCATCACATTAAA +
Preference number: 4 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLTRLVI*GLHHIK
Trigger: TTTAATGTGATGGAGGCCCCAAATAACCAAACGCGT...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp GTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGATGTACTTACGCGTTTaGTTATTTGGGGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMMYLRV*LFGASI
Trigger: GATGGAGGCCCCAAATAACCAAACGCGTAAGTACAT...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTTCAGGTGTGCAGTCATaGCAGAATGCATCAGAGCGT +
Preference number: 4 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICSGVQS*QNASER
Trigger: ACGCTCTGATGCATTCTGTCATGACTGCACACCTGA...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGATTCTAAGAGCGGCTTaGCATCGTAGAAGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMILRAA*HRRRSD
Trigger: ATCACTTCTTCTACGATGTCAAGCCGCTCTTAGAAT...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGAAAGAAGCCATTGATTaGGTAATGTGTCACTACAGG +
Preference number: 4 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLKEAID*VMCHYR
Trigger: CCTGTAGTGACACATTACTCAATCAATGGCTTCTTT...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTGCAAACACTCCAACTAAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGAATCATGGAGGTGGCTaGAGCAGGACGAATATATGT +
Preference number: 4 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMNHGGG*SRTNIC
Trigger: ACATATATTCGTCCTGCTTCAGCCACCTCCATGATT...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTTAGTTGGAGTGTTTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383556.7
ENST00000502578.5
ENST00000550681.1
ENST00000551240.1
CDS-3UTR TCA 90 bp TTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATGCCATTATCCGGTCCTaGATCATGGAGGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LNCANTPTETKSLSHWLNAIIRS*IMEVAE
Trigger: TTCAGCCACCTCCATGATTCAGGACCGGATAATGGC...ATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TCAAATTTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGGCCATTATCCGGTCCTaGATCATGGAGGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SNLNCANTPTETKSLSHWAIIRS*IMEVAE
Trigger: TTCAGCCACCTCCATGATTCAGGACCGGATAATGGC...CCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAAATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGTCAGTACATTCCTGCTaGAGGAAACACAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLSVHSC*RKHKRK
Trigger: TTTCCTTTTGTGTTTCCTTCAGCAGGAATGTACTGA...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000383556.7
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGTGCAAACACTCCAACTaGAACAAAGAGCTTGTCACA +
Preference number: 4 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMCKHSN*NKELVT
Trigger: TGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCA...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp TTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCTTTTCTCACCGAAAAATaGGCCTGTGGCAGCACAGTT +
Preference number: 4 (lower is better)
Translates to: LLAPVFLEPTTLPNIICAFLTEK*ACGSTV
Trigger: AACTGTGCTGCCACAGGCCCATTTTTCGGTGAGAAA...AGCACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383556.7
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
CDS-3UTR CCA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGAAATACATAGGGGAGTaGAGTTGTGGTTCCAAAACA +
Preference number: 4 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLKYIGE*SCGSKT
Trigger: TGTTTTGGAACCACAACTCCACTCCCCTATGTATTT...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp TTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATGTGGACAGAGCCTTGTaGAGTATTCTGCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: LNCANTPTETKSLSHWLNVDRAL*SILQDL
Trigger: CAGGTCCTGCAGAATACTCCACAAGGCTCTGTCCAC...ATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp TCAAATTTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGGTGGACAGAGCCTTGTaGAGTATTCTGCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: SNLNCANTPTETKSLSHWVDRAL*SILQDL
Trigger: CAGGTCCTGCAGAATACTCCACAAGGCTCTGTCCAC...CCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAAATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp TTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCTCCTGAATCATGGAGGTaGCTGAAGCAGGACGAATAT +
Preference number: 4 (lower is better)
Translates to: LLAPVFLEPTTLPNIICAPESWR*LKQDEY
Trigger: ATATTCGTCCTGCTTCAGCCACCTCCATGATTCAGG...AGCACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTAGGCTGGTAACAGCGTaGCTTAGAATAAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICRLVTA*LRISPP
Trigger: TGGAGGACTTATTCTAAGTCACGCTGTTACCAGCCT...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383556.7
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
CDS-3UTR TCA 90 bp TTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATTCAGGTGTGCAGTCATaGCAGAATGCATCAGAGCGT +
Preference number: 4 (lower is better)
Translates to: LNCANTPTETKSLSHWLNSGVQS*QNASER
Trigger: ACGCTCTGATGCATTCTGTCATGACTGCACACCTGA...ATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGAAAGAAGCCATTGATTaGGTAATGTGTCACTACAGG +
Preference number: 4 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMKEAID*VMCHYR
Trigger: CCTGTAGTGACACATTACTCAATCAATGGCTTCTTT...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGATGGAAAGAAGCCATTaGTTGAGTAATGTGTCACTA +
Preference number: 4 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLMERSH*LSNVSL
Trigger: TAGTGACACATTACTCAATCAATGGCTTCTTTCCAT...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCTTGGATATGCTGCCTGTaGCAATGGAAAGAAGCCATT +
Preference number: 4 (lower is better)
Translates to: LLAPVFLEPTTLPNIICAWICCL*QWKEAI
Trigger: AATGGCTTCTTTCCATTGTCACAGGCAGCATATCCA...AGCACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCTAATCATGGAGGTGGCTaGAGCAGGACGAATATATGT +
Preference number: 4 (lower is better)
Translates to: LLAPVFLEPTTLPNIICANHGGG*SRTNIC
Trigger: ACATATATTCGTCCTGCTTCAGCCACCTCCATGATT...AGCACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCTGCCACCGAATTATCCTaGCATATGTACTTACGCGTT +
Preference number: 4 (lower is better)
Translates to: LLAPVFLEPTTLPNIICAATELS*HMYLRV
Trigger: AACGCGTAAGTACATATGTCAGGATAATTCGGTGGC...AGCACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGTCAGTACATTCCTGCTaGAGGAAACACAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMSVHSC*RKHKRK
Trigger: TTTCCTTTTGTGTTTCCTTCAGCAGGAATGTACTGA...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp GTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGAAATACATAGGGGAGTaGAGTTGTGGTTCCAAAACA +
Preference number: 4 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMKYIGE*SCGSKT
Trigger: TGTTTTGGAACCACAACTCCACTCCCCTATGTATTT...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTCCTGAATCATGGAGGTaGCTGAAGCAGGACGAATAT +
Preference number: 4 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICPESWR*LKQDEY
Trigger: ATATTCGTCCTGCTTCAGCCACCTCCATGATTCAGG...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp TTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCTATGTACTTACGCGTTTaGTTATTTGGGGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: LLAPVFLEPTTLPNIICAMYLRV*LFGASI
Trigger: GATGGAGGCCCCAAATAACCAAACGCGTAAGTACAT...AGCACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCTCGTAGAAGAAGTGATTaGGTTTCTGAGAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: LLAPVFLEPTTLPNIICARRRSD*VSESHK
Trigger: TTTGTGGCTCTCAGAAACTCAATCACTTCTTCTACG...AGCACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCTATTCTAAGAGCGGCTTaGCATCGTAGAAGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: LLAPVFLEPTTLPNIICAILRAA*HRRRSD
Trigger: ATCACTTCTTCTACGATGTCAAGCCGCTCTTAGAAT...AGCACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTGCAAACACTCCAACTAAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGAAAGAAGCCATTGATTaGGTAATGTGTCACTACAGG +
Preference number: 4 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMKEAID*VMCHYR
Trigger: CCTGTAGTGACACATTACTCAATCAATGGCTTCTTT...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTTAGTTGGAGTGTTTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383556.7
ENST00000502578.5
ENST00000550681.1
ENST00000551240.1
CDS-3UTR TCA 90 bp GTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGATGGAAAGAAGCCATTaGTTGAGTAATGTGTCACTA +
Preference number: 4 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMMERSH*LSNVSL
Trigger: TAGTGACACATTACTCAATCAATGGCTTCTTTCCAT...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTTGGATATGCTGCCTGTaGCAATGGAAAGAAGCCATT +
Preference number: 4 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICWICCL*QWKEAI
Trigger: AATGGCTTCTTTCCATTGTCACAGGCAGCATATCCA...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATCAGGACGAATATATGTaGAGCCCACAGGTCCATAGA +
Preference number: 4 (lower is better)
Translates to: LNCANTPTETKSLSHWLNQDEYM*SPQVHR
Trigger: TCTATGGACCTGTGGGCTTCACATATATTCGTCCTG...ATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTAATCATGGAGGTGGCTaGAGCAGGACGAATATATGT +
Preference number: 4 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICNHGGG*SRTNIC
Trigger: ACATATATTCGTCCTGCTTCAGCCACCTCCATGATT...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCCACCGAATTATCCTaGCATATGTACTTACGCGTT +
Preference number: 4 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICATELS*HMYLRV
Trigger: AACGCGTAAGTACATATGTCAGGATAATTCGGTGGC...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp TCAAATTTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGTTTCTCACCGAAAAATaGGCCTGTGGCAGCACAGTT +
Preference number: 4 (lower is better)
Translates to: SNLNCANTPTETKSLSHWFLTEK*ACGSTV
Trigger: AACTGTGCTGCCACAGGCCCATTTTTCGGTGAGAAA...CCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAAATTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
CDS-3UTR CCA 90 bp GTGCAAACACTCCAACTAAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGAAATACATAGGGGAGTaGAGTTGTGGTTCCAAAACA +
Preference number: 4 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMKYIGE*SCGSKT
Trigger: TGTTTTGGAACCACAACTCCACTCCCCTATGTATTT...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTTAGTTGGAGTGTTTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383556.7
ENST00000502578.5
ENST00000550681.1
ENST00000551240.1
CDS-3UTR CCA 90 bp TTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATCCTGAATCATGGAGGTaGCTGAAGCAGGACGAATAT +
Preference number: 4 (lower is better)
Translates to: LNCANTPTETKSLSHWLNPESWR*LKQDEY
Trigger: ATATTCGTCCTGCTTCAGCCACCTCCATGATTCAGG...ATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp TTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCTACGCGTTTGGTTATTTaGGGCCTCCATCACATTAAA +
Preference number: 4 (lower is better)
Translates to: LLAPVFLEPTTLPNIICATRLVI*GLHHIK
Trigger: TTTAATGTGATGGAGGCCCCAAATAACCAAACGCGT...AGCACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
3UTR CAA 72 bp TGCCACCGAATTATCCTGACATATGTACTTACGCGTTaGGTTATTTGGGGCCTCCATCACATTAAACTTTAT +
Preference number: 4 (lower is better)
Translates to: CHRIILTYVLTR*VIWGLHHIKLY
Trigger: ATAAAGTTTAATGTGATGGAGGCCCCAAATAACCAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTCGTAGAAGAAGTGATTaGGTTTCTGAGAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICRRRSD*VSESHK
Trigger: TTTGTGGCTCTCAGAAACTCAATCACTTCTTCTACG...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTATTCTAAGAGCGGCTTaGCATCGTAGAAGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICILRAA*HRRRSD
Trigger: ATCACTTCTTCTACGATGTCAAGCCGCTCTTAGAAT...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCTAAAGAAGCCATTGATTaGGTAATGTGTCACTACAGG +
Preference number: 4 (lower is better)
Translates to: LLAPVFLEPTTLPNIICAKEAID*VMCHYR
Trigger: CCTGTAGTGACACATTACTCAATCAATGGCTTCTTT...AGCACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTGCAAACACTCCAACTAAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGATGGAAAGAAGCCATTaGTTGAGTAATGTGTCACTA +
Preference number: 4 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMMERSH*LSNVSL
Trigger: TAGTGACACATTACTCAATCAATGGCTTCTTTCCAT...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTTAGTTGGAGTGTTTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383556.7
ENST00000502578.5
ENST00000550681.1
ENST00000551240.1
CDS-3UTR TCA 90 bp TTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATTGGATATGCTGCCTGTaGCAATGGAAAGAAGCCATT +
Preference number: 4 (lower is better)
Translates to: LNCANTPTETKSLSHWLNWICCL*QWKEAI
Trigger: AATGGCTTCTTTCCATTGTCACAGGCAGCATATCCA...ATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TCAAATTTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGAATCATGGAGGTGGCTaGAGCAGGACGAATATATGT +
Preference number: 4 (lower is better)
Translates to: SNLNCANTPTETKSLSHWNHGGG*SRTNIC
Trigger: ACATATATTCGTCCTGCTTCAGCCACCTCCATGATT...CCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAAATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATAATCATGGAGGTGGCTaGAGCAGGACGAATATATGT +
Preference number: 4 (lower is better)
Translates to: LNCANTPTETKSLSHWLNNHGGG*SRTNIC
Trigger: ACATATATTCGTCCTGCTTCAGCCACCTCCATGATT...ATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TCAAATTTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGGCCACCGAATTATCCTaGCATATGTACTTACGCGTT +
Preference number: 4 (lower is better)
Translates to: SNLNCANTPTETKSLSHWATELS*HMYLRV
Trigger: AACGCGTAAGTACATATGTCAGGATAATTCGGTGGC...CCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAAATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCTTCAGTACATTCCTGCTaGAGGAAACACAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: LLAPVFLEPTTLPNIICASVHSC*RKHKRK
Trigger: TTTCCTTTTGTGTTTCCTTCAGCAGGAATGTACTGA...AGCACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000383556.7
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTTGCAAACACTCCAACTaGAACAAAGAGCTTGTCACA +
Preference number: 4 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICCKHSN*NKELVT
Trigger: TGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCA...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR GCA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTAGTGACATTCTCCATTaGTCACTCATCCACAAAGCT +
Preference number: 4 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICSDILH*SLIHKA
Trigger: AGCTTTGTGGATGAGTGAGCAATGGAGAATGTCACT...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383556.7
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
CDS-3UTR CCA 90 bp TTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCTAAATACATAGGGGAGTaGAGTTGTGGTTCCAAAACA +
Preference number: 4 (lower is better)
Translates to: LLAPVFLEPTTLPNIICAKYIGE*SCGSKT
Trigger: TGTTTTGGAACCACAACTCCACTCCCCTATGTATTT...AGCACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp TTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATATGTACTTACGCGTTTaGTTATTTGGGGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: LNCANTPTETKSLSHWLNMYLRV*LFGASI
Trigger: GATGGAGGCCCCAAATAACCAAACGCGTAAGTACAT...ATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TCAAATTTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCGTAGAAGAAGTGATTaGGTTTCTGAGAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: SNLNCANTPTETKSLSHWRRRSD*VSESHK
Trigger: TTTGTGGCTCTCAGAAACTCAATCACTTCTTCTACG...CCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAAATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTAAAGAAGCCATTGATTaGGTAATGTGTCACTACAGG +
Preference number: 4 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICKEAID*VMCHYR
Trigger: CCTGTAGTGACACATTACTCAATCAATGGCTTCTTT...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTTCAGTACATTCCTGCTaGAGGAAACACAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICSVHSC*RKHKRK
Trigger: TTTCCTTTTGTGTTTCCTTCAGCAGGAATGTACTGA...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000383556.7
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TCAAATTTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGTGCAAACACTCCAACTaGAACAAAGAGCTTGTCACA +
Preference number: 4 (lower is better)
Translates to: SNLNCANTPTETKSLSHWCKHSN*NKELVT
Trigger: TGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCA...CCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAAATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATTGCAAACACTCCAACTaGAACAAAGAGCTTGTCACA +
Preference number: 4 (lower is better)
Translates to: LNCANTPTETKSLSHWLNCKHSN*NKELVT
Trigger: TGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCA...ATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR GCA 90 bp TCAAATTTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGAGTGACATTCTCCATTaGTCACTCATCCACAAAGCT +
Preference number: 4 (lower is better)
Translates to: SNLNCANTPTETKSLSHWSDILH*SLIHKA
Trigger: AGCTTTGTGGATGAGTGAGCAATGGAGAATGTCACT...CCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAAATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
CDS-3UTR CCA 90 bp TCAAATTTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGACGCGTTTGGTTATTTaGGGCCTCCATCACATTAAA +
Preference number: 4 (lower is better)
Translates to: SNLNCANTPTETKSLSHWTRLVI*GLHHIK
Trigger: TTTAATGTGATGGAGGCCCCAAATAACCAAACGCGT...CCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAAATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CCA 90 bp TTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATACGCGTTTGGTTATTTaGGGCCTCCATCACATTAAA +
Preference number: 4 (lower is better)
Translates to: LNCANTPTETKSLSHWLNTRLVI*GLHHIK
Trigger: TTTAATGTGATGGAGGCCCCAAATAACCAAACGCGT...ATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTATGGAAAGAAGCCATTaGTTGAGTAATGTGTCACTA +
Preference number: 4 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICMERSH*LSNVSL
Trigger: TAGTGACACATTACTCAATCAATGGCTTCTTTCCAT...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATTCAGTACATTCCTGCTaGAGGAAACACAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: LNCANTPTETKSLSHWLNSVHSC*RKHKRK
Trigger: TTTCCTTTTGTGTTTCCTTCAGCAGGAATGTACTGA...ATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TCAAATTTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGTCAGTACTTTCCTGCTaGAGGAAACACAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: SNLNCANTPTETKSLSHWSVLSC*RKHKRK
Trigger: TTTCCTTTTGTGTTTCCTTCAGCAGGAAAGTACTGA...CCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAAATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396806.3
CDS-3UTR CCA 90 bp TCAAATTTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGAAATACATAGGGGAGTaGAGTTGTGGTTCCAAAACA +
Preference number: 4 (lower is better)
Translates to: SNLNCANTPTETKSLSHWKYIGE*SCGSKT
Trigger: TGTTTTGGAACCACAACTCCACTCCCCTATGTATTT...CCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAAATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR TCA 90 bp TTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATATGGAAAGAAGCCATTaGTTGAGTAATGTGTCACTA +
Preference number: 4 (lower is better)
Translates to: LNCANTPTETKSLSHWLNMERSH*LSNVSL
Trigger: TAGTGACACATTACTCAATCAATGGCTTCTTTCCAT...ATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
3UTR CAA 72 bp TTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTaGTCACATTGGCTTAATGGGTATGAAAATGCAGTT +
Preference number: 4 (lower is better)
Translates to: LNCANTPTETKS*SHWLNGYENAV
Trigger: AACTGCATTTTCATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
3UTR CAA 72 bp TTAAATTGTGCAAACACTCCAACTAAAACAAAGAGCTaGTCACATTGGCTTAATGGGTATGAAAATGCAGTT +
Preference number: 4 (lower is better)
Translates to: LNCANTPTKTKS*SHWLNGYENAV
Trigger: AACTGCATTTTCATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTTAGTTGGAGTGTTTGCACAATTTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383556.7
ENST00000502578.5
ENST00000550681.1
ENST00000551240.1
CDS-3UTR CAA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAACAAGTGGACAGAGCCTaGTGGAGTATTCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: PTLTLPILPTSLVLLATEQVDRA*WSILQD
Trigger: GTCCTGCAGAATACTCCACAAGGCTCTGTCCACTTG...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp TACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTCAAGTGGACAGAGCCTaGTGGAGTATTCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: YSNPPHTSYLLSSPCHRIQVDRA*WSILQD
Trigger: GTCCTGCAGAATACTCCACAAGGCTCTGTCCACTTG...AATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp CAGCAGATTCCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTCAAGTGGACAGAGCCTaGTGGAGTATTCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: QQIPTLTLPILPTSLVLLQVDRA*WSILQD
Trigger: GTCCTGCAGAATACTCCACAAGGCTCTGTCCACTTG...AAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGGAATCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp TACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTCATAGGGGAGTGGAGTaGTGGTTCCAAAACAACCAT +
Preference number: 5 (lower is better)
Translates to: YSNPPHTSYLLSSPCHRIHRGVE*WFQNNH
Trigger: ATGGTTGTTTTGGAACCACAACTCCACTCCCCTATG...AATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGCAAGTGGACAGAGCCTaGTGGAGTATTCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLQVDRA*WSILQD
Trigger: GTCCTGCAGAATACTCCACAAGGCTCTGTCCACTTG...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp CCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAAACTGAAACAAAGAGCTaGTCACATTGGCTTAATGGG +
Preference number: 5 (lower is better)
Translates to: PTLTLPILPTSLVLLATETETKS*SHWLNG
Trigger: CCCATTAAGCCAATGTGACAAGCTCTTTGTTTCAGT...TTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp TACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTTTGCTCCTGTGTTTCTaGAACCTACTACACTGCCTA +
Preference number: 5 (lower is better)
Translates to: YSNPPHTSYLLSSPCHRILLLCF*NLLHCL
Trigger: TAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAA...AATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp TACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTGCCACCGAATTTATGTACTTACGCGTTaGGTTATTTGGGGCCTCCAT +
Preference number: 5 (lower is better)
Translates to: YSNPPHTSYLLSSPCHRIYVLTR*VIWGLH
Trigger: ATGGAGGCCCCAAATAACCAAACGCGTAAGTACATA...AATTCGGTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp CAGCAGATTCCTACTCTAACCCTCCCCATACTTCCTACCTCCTTAGTTCTCCTTACTGAAACAAAGAGCTaGTCACATTGGCTTAATGGG +
Preference number: 5 (lower is better)
Translates to: QQIPTLTLPILPTSLVLLTETKS*SHWLNG
Trigger: CCCATTAAGCCAATGTGACAAGCTCTTTGTTTCAGT...AAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGGAATCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp GTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGCATAGGGGAGTGGAGTaGTGGTTCCAAAACAACCAT +
Preference number: 5 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMHRGVE*WFQNNH
Trigger: ATGGTTGTTTTGGAACCACAACTCCACTCCCCTATG...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp TTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCTCAAGTGGACAGAGCCTaGTGGAGTATTCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: LLAPVFLEPTTLPNIICAQVDRA*WSILQD
Trigger: GTCCTGCAGAATACTCCACAAGGCTCTGTCCACTTG...AGCACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGTATGTACTTACGCGTTaGGTTATTTGGGGCCTCCAT +
Preference number: 5 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLYVLTR*VIWGLH
Trigger: ATGGAGGCCCCAAATAACCAAACGCGTAAGTACATA...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTCAAGTGGACAGAGCCTaGTGGAGTATTCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICQVDRA*WSILQD
Trigger: GTCCTGCAGAATACTCCACAAGGCTCTGTCCACTTG...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGACTGAAACAAAGAGCTaGTCACATTGGCTTAATGGG +
Preference number: 5 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLTETKS*SHWLNG
Trigger: CCCATTAAGCCAATGTGACAAGCTCTTTGTTTCAGT...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp TTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCTCATAGGGGAGTGGAGTaGTGGTTCCAAAACAACCAT +
Preference number: 5 (lower is better)
Translates to: LLAPVFLEPTTLPNIICAHRGVE*WFQNNH
Trigger: ATGGTTGTTTTGGAACCACAACTCCACTCCCCTATG...AGCACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp TTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATCAAGTGGACAGAGCCTaGTGGAGTATTCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: LNCANTPTETKSLSHWLNQVDRA*WSILQD
Trigger: GTCCTGCAGAATACTCCACAAGGCTCTGTCCACTTG...ATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp CTCCTTAGTTCTCCTTGCCACCGAATTATCCTGACATATGTACTTACGCGTTTGACTAAAACAAAGAGCTaGTCACATTGGCTTAATGGG +
Preference number: 5 (lower is better)
Translates to: LLSSPCHRIILTYVLTRLTKTKS*SHWLNG
Trigger: CCCATTAAGCCAATGTGACAAGCTCTTTGTTTTAGT...CAAACGCGTAAGTACATATGTCAGGATAATTCGGTGGCAAGGAGAACTAAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383556.7
ENST00000502578.5
ENST00000550681.1
ENST00000551240.1
CDS-3UTR CAA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTCATAGGGGAGTGGAGTaGTGGTTCCAAAACAACCAT +
Preference number: 5 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICHRGVE*WFQNNH
Trigger: ATGGTTGTTTTGGAACCACAACTCCACTCCCCTATG...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp TTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCTTTGCTCCTGTGTTTCTaGAACCTACTACACTGCCTA +
Preference number: 5 (lower is better)
Translates to: LLAPVFLEPTTLPNIICALLLCF*NLLHCL
Trigger: TAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAA...AGCACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp TTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCTTATGTACTTACGCGTTaGGTTATTTGGGGCCTCCAT +
Preference number: 5 (lower is better)
Translates to: LLAPVFLEPTTLPNIICAYVLTR*VIWGLH
Trigger: ATGGAGGCCCCAAATAACCAAACGCGTAAGTACATA...AGCACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp TCAAATTTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCATAGGGGAGTGGAGTaGTGGTTCCAAAACAACCAT +
Preference number: 5 (lower is better)
Translates to: SNLNCANTPTETKSLSHWHRGVE*WFQNNH
Trigger: ATGGTTGTTTTGGAACCACAACTCCACTCCCCTATG...CCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAAATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTTTGCTCCTGTGTTTCTaGAACCTACTACACTGCCTA +
Preference number: 5 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICLLLCF*NLLHCL
Trigger: TAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAA...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTTATGTACTTACGCGTTaGGTTATTTGGGGCCTCCAT +
Preference number: 5 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICYVLTR*VIWGLH
Trigger: ATGGAGGCCCCAAATAACCAAACGCGTAAGTACATA...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp GTGCAAACACTCCAACTAAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGACTAAAACAAAGAGCTaGTCACATTGGCTTAATGGG +
Preference number: 5 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMTKTKS*SHWLNG
Trigger: CCCATTAAGCCAATGTGACAAGCTCTTTGTTTTAGT...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTTAGTTGGAGTGTTTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383556.7
ENST00000502578.5
ENST00000550681.1
ENST00000551240.1
CDS-3UTR CAA 90 bp TTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCTACTGAAACAAAGAGCTaGTCACATTGGCTTAATGGG +
Preference number: 5 (lower is better)
Translates to: LLAPVFLEPTTLPNIICATETKS*SHWLNG
Trigger: CCCATTAAGCCAATGTGACAAGCTCTTTGTTTCAGT...AGCACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp TCAAATTTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGTTGCTCCTGTGTTTCTaGAACCTACTACACTGCCTA +
Preference number: 5 (lower is better)
Translates to: SNLNCANTPTETKSLSHWLLLCF*NLLHCL
Trigger: TAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAA...CCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAAATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp GTGCAAACACTCCAACTAAAACAAAGAGCTTGTCACATTGGCTTAATGGGTATGATGACATTATGGAATTaGTTTTGCTTGCTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: VQTLQLKQRACHIGLMGMMTLWN*FCLLLC
Trigger: ACACAGGAGCAAGCAAAACAAATTCCATAATGTCAT...CATACCCATTAAGCCAATGTGACAAGCTCTTTGTTTTAGTTGGAGTGTTTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383556.7
ENST00000502578.5
ENST00000550681.1
ENST00000551240.1
CDS-3UTR CAA 90 bp TCAAATTTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGTATGTACTTACGCGTTaGGTTATTTGGGGCCTCCAT +
Preference number: 5 (lower is better)
Translates to: SNLNCANTPTETKSLSHWYVLTR*VIWGLH
Trigger: ATGGAGGCCCCAAATAACCAAACGCGTAAGTACATA...CCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAAATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTACTGAAACAAAGAGCTaGTCACATTGGCTTAATGGG +
Preference number: 5 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICTETKS*SHWLNG
Trigger: CCCATTAAGCCAATGTGACAAGCTCTTTGTTTCAGT...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp TTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTGCTATGACATTATGGAATTaGTTTTGCTTGCTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: LLAPVFLEPTTLPNIICAMTLWN*FCLLLC
Trigger: ACACAGGAGCAAGCAAAACAAATTCCATAATGTCAT...AGCACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTACTAAAACAAAGAGCTaGTCACATTGGCTTAATGGG +
Preference number: 5 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICTKTKS*SHWLNG
Trigger: CCCATTAAGCCAATGTGACAAGCTCTTTGTTTTAGT...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383556.7
ENST00000502578.5
ENST00000550681.1
ENST00000551240.1
CDS-3UTR CAA 90 bp GTTTTGCTTGCTCCTGTGTTTCTTGAACCTACTACACTGCCTAATATAATATGTATGACATTATGGAATTaGTTTTGCTTGCTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: VLLAPVFLEPTTLPNIICMTLWN*FCLLLC
Trigger: ACACAGGAGCAAGCAAAACAAATTCCATAATGTCAT...ACATATTATATTAGGCAGTGTAGTAGGTTCAAGAAACACAGGAGCAAGCAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000383556.7
ENST00000396806.3
ENST00000430148.5
ENST00000502578.5
ENST00000505384.5
ENST00000508665.5
ENST00000550681.1
ENST00000550913.1
ENST00000551240.1
ENST00000552012.1
ENST00000552446.1
CDS-3UTR CAA 90 bp TTAAATTGTGCAAACACTCCAACTGAAACAAAGAGCTTGTCACATTGGCTTAATATGACATTATGGAATTaGTTTTGCTTGCTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: LNCANTPTETKSLSHWLNMTLWN*FCLLLC
Trigger: ACACAGGAGCAAGCAAAACAAATTCCATAATGTCAT...ATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCACAATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396806.3
ENST00000430148.5
ENST00000505384.5
ENST00000508665.5
ENST00000550913.1
ENST00000552012.1
ENST00000552446.1