Pregenerated sensors for OR11H4 (Homo sapiens)
Ensembl gene IDs: ENSG00000176198Ensembl transcript IDs: ENST00000641082.1, ENST00000641525.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTCAGTGCTGGAAACATATTTAAGCTGGGCACACTTCCAGGTAAAATATACAACACTCAGACTGAGGACTaGAAGACTGCTAAAGAACTG | + |
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Preference number: 2 (lower is better) Translates to: VSAGNIFKLGTLPGKIYNTQTED*KTAKEL Trigger: CAGTTCTTTAGCAGTCTTTCAGTCCTCAGTCTGAGT...GTTGTATATTTTACCTGGAAGTGTGCCCAGCTTAAATATGTTTCCAGCACTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| 3UTR-3UTR TCA 90 bp | ATACCTGTAGTTGAACAAAGTTGGGTTTATTGTCTTGTTGCAATGAGGAAGAAGAGACTGCTAAAGAACTaGCAACATCTCGACCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: IPVVEQSWVYCLVAMRKKRLLKN*QHLDLV Trigger: AACAAGGTCGAGATGTTGTCAGTTCTTTAGCAGTCT...CTTCTTCCTCATTGCAACAAGACAATAAACCCAACTTTGTTCAACTACAGGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| 3UTR-3UTR CCA 90 bp | GGAGCAGATAGGAAAATTGGTGAATATGGGAGTGAAGATGGACATTCTTCTGAAGAAACATATTTAAGCTaGGCACACTTCCAGGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: GADRKIGEYGSEDGHSSEETYLS*AHFQVK Trigger: TTTTACCTGGAAGTGTGCCCAGCTTAAATATGTTTC...TTCAGAAGAATGTCCATCTTCACTCCCATATTCACCAATTTTCCTATCTGCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| 3UTR-3UTR CAA 90 bp | GTCAGTGCTGGAAACATATTTAAGCTGGGCACACTTCCAGGTAAAATATACAACGACAACATCTCGACCTaGTTCTTCGTTAGAACTTGT | + |
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Preference number: 3 (lower is better) Translates to: VSAGNIFKLGTLPGKIYNDNIST*FFVRTC Trigger: ACAAGTTCTAACGAAGAACAAGGTCGAGATGTTGTC...GTTGTATATTTTACCTGGAAGTGTGCCCAGCTTAAATATGTTTCCAGCACTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| 3UTR CAA 72 bp | CTGAGGCCTTACCGTTTGCTGGGTATTGTGCCACTATaGATTCCCATCAGACAAAGACTCCTAGGAGCATAC | + |
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Preference number: 4 (lower is better) Translates to: LRPYRLLGIVPL*IPIRQRLLGAY Trigger: GTATGCTCCTAGGAGTCTTTGTCTGATGGGAATCAATAGTGGCACAATACCCAGCAAACGGTAAGGCCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR TCA 90 bp | AGGAAGAAGATATACAATGATGAACCATGGGGCATGTCAGCAGGAGGGCATCTCATCTCACTGCATAGATaGTGGCTCCATTTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RKKIYNDEPWGMSAGGHLISLHR*WLHFPA Trigger: TGCTGGGAAATGGAGCCATCATCTATGCAGTGAGAT...GAGATGCCCTCCTGCTGACATGCCCCATGGTTCATCATTGTATATCTTCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR TCA 90 bp | GTTGCAATGAGGAAGAAGATATACAATGATGAACCATGGGGCATGTCAGCAGGAGCTGCAGAAGGGACCTaGAAAACAGCTGTTAGTAAC | + |
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Preference number: 4 (lower is better) Translates to: VAMRKKIYNDEPWGMSAGAAEGT*KTAVSN Trigger: GTTACTAACAGCTGTTTTTCAGGTCCCTTCTGCAGC...TCCTGCTGACATGCCCCATGGTTCATCATTGTATATCTTCTTCCTCATTGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR TCA 90 bp | GGGCATGTCAGCAGGAGGGCATCTCATGTAGAAATTCCATTTTATCATTCTAATGAAGCACCCAGAAAATaGGATGGCCTTGGTCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: GHVSRRASHVEIPFYHSNEAPRK*DGLGLG Trigger: TCCAAGACCAAGGCCATCTCATTTTCTGGGTGCTTC...ATTAGAATGATAAAATGGAATTTCTACATGAGATGCCCTCCTGCTGACATGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR TCA 90 bp | CCGTTTGCTGGGTATTGTGCCACTATTGATTCCCATCAGACAAAGACTCCTAGGTTGGCTCACGAATTTTaGCGAATTCTCATTCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: PFAGYCATIDSHQTKTPRLAHEF*RILIPN Trigger: GTTTGGAATGAGAATTCGTCAAAATTCGTGAGCCAA...CCTAGGAGTCTTTGTCTGATGGGAATCAATAGTGGCACAATACCCAGCAAACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR CCA 90 bp | CCGTTTGCTGGGTATTGTGCCACTATTGATTCCCATCAGACAAAGACTCCTAGGAGTATGGCACATCTTTaGCTCACGAATTTTGACGAA | + |
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Preference number: 4 (lower is better) Translates to: PFAGYCATIDSHQTKTPRSMAHL*LTNFDE Trigger: TTCGTCAAAATTCGTGAGCCAAAGATGTGCCATACT...CCTAGGAGTCTTTGTCTGATGGGAATCAATAGTGGCACAATACCCAGCAAACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR TCA 90 bp | GCTAAAGAACTGACAACATCTCGACCTTGTTCTTCGTTAGAACTTGTAAGTATGAGAACCTTACAGTCATaGTGGCAGGGTACTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: AKELTTSRPCSSLELVSMRTLQS*WQGTAV Trigger: CACTGCAGTACCCTGCCATCATGACTGTAAGGTTCT...CATACTTACAAGTTCTAACGAAGAACAAGGTCGAGATGTTGTCAGTTCTTTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR GCA 90 bp | GGAGCAGATAGGAAAATTGGTGAATATGGGAGTGAAGATGGACATTCTTCTGAATTTTCTCCGACCAGCTaGAGAAGGGACCTGAAAAAC | + |
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Preference number: 4 (lower is better) Translates to: GADRKIGEYGSEDGHSSEFSPTS*RRDLKN Trigger: GTTTTTCAGGTCCCTTCTGCAGCTGGTCGGAGAAAA...TTCAGAAGAATGTCCATCTTCACTCCCATATTCACCAATTTTCCTATCTGCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR CCA 90 bp | AGGAAGAAGATATACAATGATGAACCATGGGGCATGTCAGCAGGAGGGCATCTCGTAGAAAATGGGAATTaGGTATCCAAGGAATCCAAT | + |
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Preference number: 4 (lower is better) Translates to: RKKIYNDEPWGMSAGGHLVENGN*VSKESN Trigger: ATTGGATTCCTTGGATACCCAATTCCCATTTTCTAC...GAGATGCCCTCCTGCTGACATGCCCCATGGTTCATCATTGTATATCTTCTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR TCA 90 bp | GGGCATGTCAGCAGGAGGGCATCTCATGTAGAAATTCCATTTTATCATTCTAATACTCAGACTGAGGACTaGAAGACTGCTAAAGAACTG | + |
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Preference number: 4 (lower is better) Translates to: GHVSRRASHVEIPFYHSNTQTED*KTAKEL Trigger: CAGTTCTTTAGCAGTCTTTCAGTCCTCAGTCTGAGT...ATTAGAATGATAAAATGGAATTTCTACATGAGATGCCCTCCTGCTGACATGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR GCA 90 bp | GGAGCAGATAGGAAAATTGGTGAATATGGGAGTGAAGATGGACATTCTTCTGAATGGGTTGCATCTCACTaGATAGATGATGGCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: GADRKIGEYGSEDGHSSEWVASH*IDDGSI Trigger: AATGGAGCCATCATCTATGCAGTGAGATGCAACCCA...TTCAGAAGAATGTCCATCTTCACTCCCATATTCACCAATTTTCCTATCTGCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR CCA 90 bp | GGAGCAGATAGGAAAATTGGTGAATATGGGAGTGAAGATGGACATTCTTCTGAAACCCAGAAAATGAGATaGCCTTGGTCTTGGAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: GADRKIGEYGSEDGHSSETQKMR*PWSWRE Trigger: TTCTCTCCAAGACCAAGGCCATCTCATTTTCTGGGT...TTCAGAAGAATGTCCATCTTCACTCCCATATTCACCAATTTTCCTATCTGCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR CCA 90 bp | GAGGAGCAGATAGGAAAATTGGTGAATATGGGAGTGAAGATGGACATTCTTCTGAAATACATTCAGTTATaGGAGCTGGGGCACAGGATA | + |
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Preference number: 4 (lower is better) Translates to: EEQIGKLVNMGVKMDILLKYIQL*ELGHRI Trigger: TATCCTGTGCCCCAGCTCCCATAACTGAATGTATTT...CAGAAGAATGTCCATCTTCACTCCCATATTCACCAATTTTCCTATCTGCTCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR TCA 90 bp | GAGGAGCAGATAGGAAAATTGGTGAATATGGGAGTGAAGATGGACATTCTTCTGCTGAATATACCAGTGTaGGGATCTTCTGCAATAAAG | + |
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Preference number: 4 (lower is better) Translates to: EEQIGKLVNMGVKMDILLLNIPV*GSSAIK Trigger: CTTTATTGCAGAAGATCCTCACACTGGTATATTCAG...CAGAAGAATGTCCATCTTCACTCCCATATTCACCAATTTTCCTATCTGCTCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR TCA 90 bp | GGGCATGTCAGCAGGAGGGCATCTCATGTAGAAATTCCATTTTATCATTCTAATAAGAGGAGTCGTTACTaGATATACCAGTGTGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: GHVSRRASHVEIPFYHSNKRSRY*IYQCED Trigger: ATCCTCACACTGGTATATTCAGTAACGACTCCTCTT...ATTAGAATGATAAAATGGAATTTCTACATGAGATGCCCTCCTGCTGACATGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR TCA 90 bp | GGAGCAGATAGGAAAATTGGTGAATATGGGAGTGAAGATGGACATTCTTCTGAAAGACTGCTAAAGAACTaGCAACATCTCGACCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: GADRKIGEYGSEDGHSSERLLKN*QHLDLV Trigger: AACAAGGTCGAGATGTTGTCAGTTCTTTAGCAGTCT...TTCAGAAGAATGTCCATCTTCACTCCCATATTCACCAATTTTCCTATCTGCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR GCA 90 bp | GGGCATGTCAGCAGGAGGGCATCTCATGTAGAAATTCCATTTTATCATTCTAATAGTGTGAGGATCTTCTaGAATAAAGTTGGGATCCCA | + |
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Preference number: 4 (lower is better) Translates to: GHVSRRASHVEIPFYHSNSVRIF*NKVGIP Trigger: TGGGATCCCAACTTTATTGCAGAAGATCCTCACACT...ATTAGAATGATAAAATGGAATTTCTACATGAGATGCCCTCCTGCTGACATGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR CCA 90 bp | ACAACATCTCGACCTTGTTCTTCGTTAGAACTTGTAAGTATGGCACATCTTTGGTTGCTGACCTGTTCATaGGTCTTAAGTCATAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: TTSRPCSSLELVSMAHLWLLTCS*VLSHKC Trigger: ACACTTATGACTTAAGACCCATGAACAGGTCAGCAA...CCAAAGATGTGCCATACTTACAAGTTCTAACGAAGAACAAGGTCGAGATGTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR CCA 90 bp | GCTAAAGAACTGACAACATCTCGACCTTGTTCTTCGTTAGAACTTGTAAGTATGGGGAGATGTAGAAAATaGGAATTGGGTATCCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: AKELTTSRPCSSLELVSMGRCRK*ELGIQG Trigger: TCCTTGGATACCCAATTCCCATTTTCTACATCTCCC...CATACTTACAAGTTCTAACGAAGAACAAGGTCGAGATGTTGTCAGTTCTTTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR TCA 90 bp | GGGCATGTCAGCAGGAGGGCATCTCATGTAGAAATTCCATTTTATCATTCTAATTTACATACATTACCATaGCTGTCCCATAGAAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: GHVSRRASHVEIPFYHSNLHTLP*LSHRKE Trigger: CTCTTTTCTATGGGACAGTCATGGTAATGTATGTAA...ATTAGAATGATAAAATGGAATTTCTACATGAGATGCCCTCCTGCTGACATGCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR CCA 90 bp | AGAGTCAGTGCTGGAAACATATTTAAGCTGGGCACACTTCCAGGTAAAATATACGAAACATATTTAAGCTaGGCACACTTCCAGGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: RVSAGNIFKLGTLPGKIYETYLS*AHFQVK Trigger: TTTTACCTGGAAGTGTGCCCAGCTTAAATATGTTTC...GTATATTTTACCTGGAAGTGTGCCCAGCTTAAATATGTTTCCAGCACTGACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR CCA 90 bp | GCTAAAGAACTGACAACATCTCGACCTTGTTCTTCGTTAGAACTTGTAAGTATGGTAGTTGAACAAAGTTaGGTTTATTGTCTTGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: AKELTTSRPCSSLELVSMVVEQS*VYCLVA Trigger: TGCAACAAGACAATAAACCCAACTTTGTTCAACTAC...CATACTTACAAGTTCTAACGAAGAACAAGGTCGAGATGTTGTCAGTTCTTTAGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR CAA 90 bp | AGGAAGAAGATATACAATGATGAACCATGGGGCATGTCAGCAGGAGGGCATCTCCTGTCACGATGTGTGTaGCTGACCTGTTCATGGGTC | + |
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Preference number: 5 (lower is better) Translates to: RKKIYNDEPWGMSAGGHLLSRCV*LTCSWV Trigger: GACCCATGAACAGGTCAGCAACACACATCGTGACAG...GAGATGCCCTCCTGCTGACATGCCCCATGGTTCATCATTGTATATCTTCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR CAA 90 bp | AGGAAGAAGATATACAATGATGAACCATGGGGCATGTCAGCAGGAGGGCATCTCGAGATGGCCTTGGTCTaGGAGAGAATGTTGACTAGC | + |
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Preference number: 5 (lower is better) Translates to: RKKIYNDEPWGMSAGGHLEMALV*ERMLTS Trigger: GCTAGTCAACATTCTCTCCAAGACCAAGGCCATCTC...GAGATGCCCTCCTGCTGACATGCCCCATGGTTCATCATTGTATATCTTCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR CAA 90 bp | AGGAAGAAGATATACAATGATGAACCATGGGGCATGTCAGCAGGAGGGCATCTCACCACAGAAGGGGAGTaGGGAGATGTAGAAAATGGG | + |
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Preference number: 5 (lower is better) Translates to: RKKIYNDEPWGMSAGGHLTTEGE*GDVENG Trigger: CCCATTTTCTACATCTCCCAACTCCCCTTCTGTGGT...GAGATGCCCTCCTGCTGACATGCCCCATGGTTCATCATTGTATATCTTCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR CAA 90 bp | GTTGCAATGAGGAAGAAGATATACAATGATGAACCATGGGGCATGTCAGCAGGACTGAGGCCTTACCGTTaGCTGGGTATTGTGCCACTA | + |
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Preference number: 5 (lower is better) Translates to: VAMRKKIYNDEPWGMSAGLRPYR*LGIVPL Trigger: TAGTGGCACAATACCCAGCAAACGGTAAGGCCTCAG...TCCTGCTGACATGCCCCATGGTTCATCATTGTATATCTTCTTCCTCATTGCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS TCA 90 bp | GGCTCCATTTCCCAGCAAGGTCAAGACATAAATCACCAAAAACAATaGGAAGAGGAAAATCTGAATCTTCCAGCAACCAGGGAATCCCAG | + |
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Preference number: 5 (lower is better) Translates to: GSISQQGQDINHQKQ*EEENLNLPATRESQ Trigger: CTGGGATTCCCTGGTTGCTGGAAGATTCAGATTTTCCTCTTCTCATTGTTTTTGGTGATTTATGTCTTGACCTTGCTGGGAAATGGAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000641082.1 ENST00000641525.1 |
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| CDS-3UTR CAA 90 bp | ACAACATCTCGACCTTGTTCTTCGTTAGAACTTGTAAGTATGGCACATCTTTGGGAAAATGAGATGGCCTaGGTCTTGGAGAGAATGTTG | + |
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Preference number: 5 (lower is better) Translates to: TTSRPCSSLELVSMAHLWENEMA*VLERML Trigger: CAACATTCTCTCCAAGACCAAGGCCATCTCATTTTC...CCAAAGATGTGCCATACTTACAAGTTCTAACGAAGAACAAGGTCGAGATGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS CCA 90 bp | TCTCGACCTTGTTCTTCGTTAGAACTTGTAAGTATGGCACATCTTTaGCTCACGAATTTTGACGAATTCTCATTCCAAACAGGACATTTC | + |
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Preference number: 5 (lower is better) Translates to: SRPCSSLELVSMAHL*LTNFDEFSFQTGHF Trigger: GAAATGTCCTGTTTGGAATGAGAATTCGTCAAAATTCGTGAGCCAAAGATGTGCCATACTTACAAGTTCTAACGAAGAACAAGGTCGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000641082.1 ENST00000641525.1 |
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| CDS-3UTR CAA 90 bp | ACAACATCTCGACCTTGTTCTTCGTTAGAACTTGTAAGTATGGCACATCTTTGGGTCTTGGAGAGAATGTaGACTAGCATGTTAGGAATA | + |
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Preference number: 5 (lower is better) Translates to: TTSRPCSSLELVSMAHLWVLERM*TSMLGI Trigger: TATTCCTAACATGCTAGTCAACATTCTCTCCAAGAC...CCAAAGATGTGCCATACTTACAAGTTCTAACGAAGAACAAGGTCGAGATGTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR CAA 90 bp | ACAACATCTCGACCTTGTTCTTCGTTAGAACTTGTAAGTATGGCACATCTTTGGTTTGGCTCACGAATTTaGACGAATTCTCATTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: TTSRPCSSLELVSMAHLWFGSRI*TNSHSK Trigger: TTTGGAATGAGAATTCGTCAAAATTCGTGAGCCAAA...CCAAAGATGTGCCATACTTACAAGTTCTAACGAAGAACAAGGTCGAGATGTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS-3UTR CAA 90 bp | ATACCTGTAGTTGAACAAAGTTGGGTTTATTGTCTTGTTGCAATGAGGAAGAAGGACAACATCTCGACCTaGTTCTTCGTTAGAACTTGT | + |
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Preference number: 5 (lower is better) Translates to: IPVVEQSWVYCLVAMRKKDNIST*FFVRTC Trigger: ACAAGTTCTAACGAAGAACAAGGTCGAGATGTTGTC...CTTCTTCCTCATTGCAACAAGACAATAAACCCAACTTTGTTCAACTACAGGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS GCA 90 bp | TTAAAAAGAGGAGTCGTTACTGAATATACCAGTGTGAGGATCTTCTaGAATAAAGTTGGGATCCCATATGTAGGACTTACATACATTACC | + |
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Preference number: 5 (lower is better) Translates to: LKRGVVTEYTSVRIF*NKVGIPYVGLTYIT Trigger: GGTAATGTATGTAAGTCCTACATATGGGATCCCAACTTTATTGCAGAAGATCCTCACACTGGTATATTCAGTAACGACTCCTCTTTTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000641082.1 ENST00000641525.1 |
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| CDS-3UTR CAA 90 bp | ATACCTGTAGTTGAACAAAGTTGGGTTTATTGTCTTGTTGCAATGAGGAAGAAGACAAAGTTGGGTTTATaGTCTTGTTGCAATGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: IPVVEQSWVYCLVAMRKKTKLGL*SCCNEE Trigger: TTCCTCATTGCAACAAGACAATAAACCCAACTTTGT...CTTCTTCCTCATTGCAACAAGACAATAAACCCAACTTTGTTCAACTACAGGTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641082.1 |
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| CDS GCA 72 bp | GGAGTCGTTACTGAATATACCAGTGTGAGGATCTTCTaGAATAAAGTTGGGATCCCATATGTAGGACTTACA | + |
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Preference number: 6 (lower is better) Translates to: GVVTEYTSVRIF*NKVGIPYVGLT Trigger: TGTAAGTCCTACATATGGGATCCCAACTTTATTGCAGAAGATCCTCACACTGGTATATTCAGTAACGACTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000641082.1 ENST00000641525.1 |
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| CDS TCA 72 bp | ACTTGTAAGTATGGCACATCTTTGGCTCACGAATTTTaGCGAATTCTCATTCCAAACAGGACATTTCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: TCKYGTSLAHEF*RILIPNRTFLR Trigger: TCTGAGAAATGTCCTGTTTGGAATGAGAATTCGTCAAAATTCGTGAGCCAAAGATGTGCCATACTTACAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000641082.1 ENST00000641525.1 |
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| CDS CCA 72 bp | TGTTCTTCGTTAGAACTTGTAAGTATGGCACATCTTTaGCTCACGAATTTTGACGAATTCTCATTCCAAACA | + |
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Preference number: 6 (lower is better) Translates to: CSSLELVSMAHL*LTNFDEFSFQT Trigger: TGTTTGGAATGAGAATTCGTCAAAATTCGTGAGCCAAAGATGTGCCATACTTACAAGTTCTAACGAAGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000641082.1 ENST00000641525.1 |
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