Pregenerated sensors for OR10H1 (Homo sapiens)
Ensembl gene IDs: ENSG00000186723Ensembl transcript IDs: ENST00000334920.3, ENST00000641419.1
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATCCTGGGGTCTACACTCAATGTCCAGATTCAACAGAGAGCTCCTaGCTGGCCCATGAGCCGTGTCAACTTCTAACACAGCATTCGGTA | + |
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Preference number: 1 (lower is better) Translates to: HPGVYTQCPDSTESS*LAHEPCQLLTQHSV Trigger: TACCGAATGCTGTGTTAGAAGTTGACACGGCTCATGGGCCAGCCAGGAGCTCTCTGTTGAATCTGGACATTGAGTGTAGACCCCAGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR TCA 90 bp | AAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTaGCTTTTTAGTGATTGCCATTCTAACTGGTGTGAGATGATATCT | + |
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Preference number: 1 (lower is better) Translates to: KCSYFSTSSPAPVVS*LFSDCHSNWCEMIS Trigger: AGATATCATCTCACACCAGTTAGAATGGCAATCACTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR TCA 90 bp | TTGTTTCCTGACTTTTTAGTGATTGCCATTCTAACTGGTGTGAGATaGTATCTCATTGTGGTTTCCATTTGCATTTCTCTGATGGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: LFPDFLVIAILTGVR*YLIVVSICISLMAS Trigger: ACTGGCCATCAGAGAAATGCAAATGGAAACCACAATGAGATATCATCTCACACCAGTTAGAATGGCAATCACTAAAAAGTCAGGAAACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR-3UTR GCA 90 bp | CATCCTGGGGTCTACACTCAATGTCCAGATTCAACAGAGAGCTCCTGGCTGGCCGTGATCTCAGCTCACTaGAACCTCCACCTACCGGGT | + |
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Preference number: 2 (lower is better) Translates to: HPGVYTQCPDSTESSWLAVISAH*NLHLPG Trigger: ACCCGGTAGGTGGAGGTTGCAGTGAGCTGAGATCAC...GGCCAGCCAGGAGCTCTCTGTTGAATCTGGACATTGAGTGTAGACCCCAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR-3UTR CCA 90 bp | CGCCACACTGACTCCCACAATGGGGAACTAGTTTACAGTCCCACCAACAGTGTACAGAGAGCTCCTGGCTaGCCCATGAGCCGTGTCAAC | + |
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Preference number: 2 (lower is better) Translates to: RHTDSHNGELVYSPTNSVQRAPG*PMSRVN Trigger: GTTGACACGGCTCATGGGCCAGCCAGGAGCTCTCTG...TACACTGTTGGTGGGACTGTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR-3UTR CCA 90 bp | CATCCTGGGGTCTACACTCAATGTCCAGATTCAACAGAGAGCTCCTGGCTGGCCGGCATCCCAAGGTGCTaGAATTATAAGTGTGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: HPGVYTQCPDSTESSWLAGIPRC*NYKCEP Trigger: TGGCTCACACTTATAATTCCAGCACCTTGGGATGCC...GGCCAGCCAGGAGCTCTCTGTTGAATCTGGACATTGAGTGTAGACCCCAGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR-3UTR TCA 90 bp | CGCCACACTGACTCCCACAATGGGGAACTAGTTTACAGTCCCACCAACAGTGTACTGGGATTACAGGCATaGGTCACCACGGAACGTAAT | + |
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Preference number: 2 (lower is better) Translates to: RHTDSHNGELVYSPTNSVLGLQA*VTTERN Trigger: ATTACGTTCCGTGGTGACTCATGCCTGTAATCCCAG...TACACTGTTGGTGGGACTGTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR-3UTR TCA 90 bp | GGGGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACTGCCCAGGCTGCTCTTaGACTCCTGACCTCAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: GELVYSPTNSVKVFLFLHCPGCS*TPDLRG Trigger: TCCCCTGAGGTCAGGAGTTCAAGAGCAGCCTGGGCA...GTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR-3UTR TCA 90 bp | CGCCACACTGACTCCCACAATGGGGAACTAGTTTACAGTCCCACCAACAGTGTACCATTTGCATTTCTCTaGTGGCCAGTGATGACGAGC | + |
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Preference number: 2 (lower is better) Translates to: RHTDSHNGELVYSPTNSVPFAFL*WPVMTS Trigger: GCTCGTCATCACTGGCCATCAGAGAAATGCAAATGG...TACACTGTTGGTGGGACTGTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR-3UTR TCA 90 bp | CGCCACACTGACTCCCACAATGGGGAACTAGTTTACAGTCCCACCAACAGTGTATCCTTGATCCAACCATaGAGACATCTCAGTCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: RHTDSHNGELVYSPTNSVSLIQP*RHLSLS Trigger: GGAGAGACTGAGATGTCTTCATGGTTGGATCAAGGA...TACACTGTTGGTGGGACTGTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR-3UTR TCA 90 bp | CGCCACACTGACTCCCACAATGGGGAACTAGTTTACAGTCCCACCAACAGTGTAATAGAGAGTGGGGCATaGAATCTTCCCTCTCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: RHTDSHNGELVYSPTNSVIESGA*NLPSLF Trigger: AAAGAGAGAGGGAAGATTTCATGCCCCACTCTCTAT...TACACTGTTGGTGGGACTGTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR-3UTR CCA 90 bp | GATAAACTCATCCTGGGGTCTACACTCAATGTCCAGATTCAACAGAGAGCTCCTAGTCTCCCAGGTAGCTaGGACTACAGGCATGTACCA | + |
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Preference number: 2 (lower is better) Translates to: DKLILGSTLNVQIQQRAPSLPGS*DYRHVP Trigger: TGGTACATGCCTGTAGTCCCAGCTACCTGGGAGACT...AGGAGCTCTCTGTTGAATCTGGACATTGAGTGTAGACCCCAGGATGAGTTTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR-3UTR TCA 90 bp | CGCCACACTGACTCCCACAATGGGGAACTAGTTTACAGTCCCACCAACAGTGTAGCACCTGTTGTTTCCTaGCTTTTTAGTGATTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: RHTDSHNGELVYSPTNSVAPVVS*LFSDCH Trigger: ATGGCAATCACTAAAAAGTCAGGAAACAACAGGTGC...TACACTGTTGGTGGGACTGTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR-3UTR GCA 90 bp | GGGGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACGTTGTAGCTACCTGGTaGGGCACTCATAGAGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: GELVYSPTNSVKVFLFLHVVATW*GTHREW Trigger: CCACTCTCTATGAGTGCCGCACCAGGTAGCTACAAC...GTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR-3UTR CCA 90 bp | TCTAGATCCCTGAGGAATCGCCACACTGACTCCCACAATGGGGAACTAGTTTACGAGATAAACTCATCCTaGGGTCTACACTCAATGTCC | + |
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Preference number: 2 (lower is better) Translates to: SRSLRNRHTDSHNGELVYEINSS*GLHSMS Trigger: GGACATTGAGTGTAGACCCCAGGATGAGTTTATCTC...GTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCGATTCCTCAGGGATCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR-3UTR CCA 90 bp | GGGGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACGGCACTCATAGAGAGTaGGGCATGAAATCTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: GELVYSPTNSVKVFLFLHGTHRE*GMKSSL Trigger: GAGGGAAGATTTCATGCCCCACTCTCTATGAGTGCC...GTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR-3UTR CCA 90 bp | GGGGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACCATGCTAGACTGCAGTaGCACAGTCATAGTTCACTG | + |
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Preference number: 2 (lower is better) Translates to: GELVYSPTNSVKVFLFLHHARLQ*HSHSSL Trigger: CAGTGAACTATGACTGTGCCACTGCAGTCTAGCATG...GTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR-3UTR CCA 90 bp | GGGGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACCAACCTCTGCCTCCATaGTTCAAGCTATTCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: GELVYSPTNSVKVFLFLHQPLPP*FKLFSC Trigger: ACAGGAGAATAGCTTGAACCATGGAGGCAGAGGTTG...GTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR-3UTR CCA 90 bp | GGGGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACTCCTCTGCTATAATCTaGAGTAGCCTTACAAAATCT | + |
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Preference number: 2 (lower is better) Translates to: GELVYSPTNSVKVFLFLHSSAII*SSLTKS Trigger: AGATTTTGTAAGGCTACTCCAGATTATAGCAGAGGA...GTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR-3UTR TCA 90 bp | TTTTTCCTTGATCCAACCATGAAGACATCTCAGTCTCTCCACAACTATTCAAGAAGATCTGTGCAATGCTaGAATTTAGGGTACTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: FFLDPTMKTSQSLHNYSRRSVQC*NLGYFS Trigger: AGAAAAGTACCCTAAATTTCAGCATTGCACAGATCT...TCTTGAATAGTTGTGGAGAGACTGAGATGTCTTCATGGTTGGATCAAGGAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR-3UTR CAA 90 bp | TCTAGATCCCTGAGGAATCGCCACACTGACTCCCACAATGGGGAACTAGTTTACTGGGGTTTCAGCCATTaGCCCAGGCTGCTCTTGAAC | + |
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Preference number: 3 (lower is better) Translates to: SRSLRNRHTDSHNGELVYWGFSH*PRLLLN Trigger: GTTCAAGAGCAGCCTGGGCAAATGGCTGAAACCCCA...GTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCGATTCCTCAGGGATCTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR TCA 72 bp | ATGTCCAGATTCAACAGAGAGCTCCTGGCTGGCCCATaGGCCGTGTCAACTTCTAACACAGCATTCGGTATC | + |
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Preference number: 3 (lower is better) Translates to: MSRFNRELLAGP*AVSTSNTAFGI Trigger: GATACCGAATGCTGTGTTAGAAGTTGACACGGCTCATGGGCCAGCCAGGAGCTCTCTGTTGAATCTGGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR TCA 72 bp | TGGCTGGGTCAAATGATATTTCTAGTTCTAGATCCCTaGGGAATCGCCACACTGACTCCCACAATGGGGAAC | + |
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Preference number: 3 (lower is better) Translates to: WLGQMIFLVLDP*GIATLTPTMGN Trigger: GTTCCCCATTGTGGGAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATATCATTTGACCCAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR-3UTR CAA 90 bp | CGCCACACTGACTCCCACAATGGGGAACTAGTTTACAGTCCCACCAACAGTGTATCCTTTGCCCACTTTTaGATGGGATTGTTTGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: RHTDSHNGELVYSPTNSVSFAHF*MGLFVF Trigger: AAAAACAAACAATCCCATCAAAAAGTGGGCAAAGGA...TACACTGTTGGTGGGACTGTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR TCA 72 bp | TATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTaGCTTTTTAGTGATTGCCATTCTAACTGGTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: YFSTSSPAPVVS*LFSDCHSNWCE Trigger: CTCACACCAGTTAGAATGGCAATCACTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR-3UTR CAA 90 bp | TTTTTCCTTGATCCAACCATGAAGACATCTCAGTCTCTCCACAACTATTCAAGATTGTCAAGTCTAGTCTaGAACTCCTGGCCTCAAGCA | + |
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Preference number: 3 (lower is better) Translates to: FFLDPTMKTSQSLHNYSRLSSLV*NSWPQA Trigger: TGCTTGAGGCCAGGAGTTCAAGACTAGACTTGACAA...TCTTGAATAGTTGTGGAGAGACTGAGATGTCTTCATGGTTGGATCAAGGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR CCA 72 bp | ATTTATAATCCTTTGGGTATATACCCAGTAATGGGATaGCTGGGTCAAATGATATTTCTAGTTCTAGATCCC | + |
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Preference number: 3 (lower is better) Translates to: IYNPLGIYPVMG*LGQMIFLVLDP Trigger: GGGATCTAGAACTAGAAATATCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR CCA 90 bp | TCTAGATCCCTGAGGAATCGCCACACTGACTCCCACAATGGGGAACTAGTTTACCCGAGATGGCGCCACTaGACTCCACCCTGGCGACAG | + |
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Preference number: 4 (lower is better) Translates to: SRSLRNRHTDSHNGELVYPRWRH*TPPWRQ Trigger: CTGTCGCCAGGGTGGAGTCCAGTGGCGCCATCTCGG...GTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCGATTCCTCAGGGATCTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR GCA 90 bp | CATCCTGGGGTCTACACTCAATGTCCAGATTCAACAGAGAGCTCCTGGCTGGCCCCAGGCATCTGCTTCTaGTTCATCCCAGTAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: HPGVYTQCPDSTESSWLAPGICF*FIPVGG Trigger: GCCTCCTACTGGGATGAAGCAGAAGCAGATGCCTGG...GGCCAGCCAGGAGCTCTCTGTTGAATCTGGACATTGAGTGTAGACCCCAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR TCA 90 bp | CGCCACACTGACTCCCACAATGGGGAACTAGTTTACAGTCCCACCAACAGTGTACTGGTCTCAAACTCCTaGCCTCAGGTGATCCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: RHTDSHNGELVYSPTNSVLVSNS*PQVIRL Trigger: CAGGCGGATCACCTGAGGTCAGGAGTTTGAGACCAG...TACACTGTTGGTGGGACTGTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR TCA 90 bp | CGCCACACTGACTCCCACAATGGGGAACTAGTTTACAGTCCCACCAACAGTGTACTCCTGGCTGGCCCATaGGCCGTGTCAACTTCTAAC | + |
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Preference number: 4 (lower is better) Translates to: RHTDSHNGELVYSPTNSVLLAGP*AVSTSN Trigger: GTTAGAAGTTGACACGGCTCATGGGCCAGCCAGGAG...TACACTGTTGGTGGGACTGTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR GCA 90 bp | CATCCTGGGGTCTACACTCAATGTCCAGATTCAACAGAGAGCTCCTGGCTGGCCGGGACTCCAGGCATCTaGTTCTGCTTCATCCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: HPGVYTQCPDSTESSWLAGTPGI*FCFIPV Trigger: TACTGGGATGAAGCAGAAGCAGATGCCTGGAGTCCC...GGCCAGCCAGGAGCTCTCTGTTGAATCTGGACATTGAGTGTAGACCCCAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR GCA 90 bp | CATCCTGGGGTCTACACTCAATGTCCAGATTCAACAGAGAGCTCCTGGCTGGCCAAGGCCACTAGGAGATaGTGCTTCCCCATGACTGAC | + |
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Preference number: 4 (lower is better) Translates to: HPGVYTQCPDSTESSWLAKATRR*CFPMTD Trigger: GTCAGTCATGGGGAAGCAGCATCTCCTAGTGGCCTT...GGCCAGCCAGGAGCTCTCTGTTGAATCTGGACATTGAGTGTAGACCCCAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR GCA 90 bp | CATCCTGGGGTCTACACTCAATGTCCAGATTCAACAGAGAGCTCCTGGCTGGCCGTTGTAGCTACCTGGTaGGGCACTCATAGAGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: HPGVYTQCPDSTESSWLAVVATW*GTHREW Trigger: CCACTCTCTATGAGTGCCGCACCAGGTAGCTACAAC...GGCCAGCCAGGAGCTCTCTGTTGAATCTGGACATTGAGTGTAGACCCCAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR CCA 90 bp | CATCCTGGGGTCTACACTCAATGTCCAGATTCAACAGAGAGCTCCTGGCTGGCCGCGAGTCTCAGTTGCTaGTGGCTGTTTCAAAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: HPGVYTQCPDSTESSWLAASLSC*WLFQRP Trigger: TGGCCTTTGAAACAGCCACCAGCAACTGAGACTCGC...GGCCAGCCAGGAGCTCTCTGTTGAATCTGGACATTGAGTGTAGACCCCAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR CCA 90 bp | TCTAGATCCCTGAGGAATCGCCACACTGACTCCCACAATGGGGAACTAGTTTACTGCAGTAAGCCGAGATaGCGCCACTGGACTCCACCC | + |
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Preference number: 4 (lower is better) Translates to: SRSLRNRHTDSHNGELVYCSKPR*RHWTPP Trigger: GGGTGGAGTCCAGTGGCGCCATCTCGGCTTACTGCA...GTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCGATTCCTCAGGGATCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR CCA 90 bp | TCTAGATCCCTGAGGAATCGCCACACTGACTCCCACAATGGGGAACTAGTTTACCAGAGAGCTCCTGGCTaGCCCATGAGCCGTGTCAAC | + |
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Preference number: 4 (lower is better) Translates to: SRSLRNRHTDSHNGELVYQRAPG*PMSRVN Trigger: GTTGACACGGCTCATGGGCCAGCCAGGAGCTCTCTG...GTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCGATTCCTCAGGGATCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR TCA 90 bp | GGGGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACTCCACAGGTGGGAGCTaGCCAGGTGTGGGCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: GELVYSPTNSVKVFLFLHSTGGS*PGVGCT Trigger: GGTGCAGCCCACACCTGGTCAGCTCCCACCTGTGGA...GTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR TCA 90 bp | CATCCTGGGGTCTACACTCAATGTCCAGATTCAACAGAGAGCTCCTGGCTGGCCCCATTTGCATTTCTCTaGTGGCCAGTGATGACGAGC | + |
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Preference number: 4 (lower is better) Translates to: HPGVYTQCPDSTESSWLAPFAFL*WPVMTS Trigger: GCTCGTCATCACTGGCCATCAGAGAAATGCAAATGG...GGCCAGCCAGGAGCTCTCTGTTGAATCTGGACATTGAGTGTAGACCCCAGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR CCA 90 bp | TCTAGATCCCTGAGGAATCGCCACACTGACTCCCACAATGGGGAACTAGTTTACGAGTTTCTCCACAGGTaGGAGCTGACCAGGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SRSLRNRHTDSHNGELVYEFLHR*ELTRCG Trigger: CCCACACCTGGTCAGCTCCCACCTGTGGAGAAACTC...GTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCGATTCCTCAGGGATCTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR TCA 90 bp | GATAAACTCATCCTGGGGTCTACACTCAATGTCCAGATTCAACAGAGAGCTCCTGGGAGGGAGAAACCTTaGGAGGACAGGAGCCGATCA | + |
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Preference number: 4 (lower is better) Translates to: DKLILGSTLNVQIQQRAPGREKP*EDRSRS Trigger: TGATCGGCTCCTGTCCTCTCAAGGTTTCTCCCTCCC...AGGAGCTCTCTGTTGAATCTGGACATTGAGTGTAGACCCCAGGATGAGTTTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR TCA 90 bp | TCTAGATCCCTGAGGAATCGCCACACTGACTCCCACAATGGGGAACTAGTTTACCTGCTTCCCCATGACTaGCCGTCTACACACTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: SRSLRNRHTDSHNGELVYLLPHD*PSTHSC Trigger: ACAAGAGTGTGTAGACGGTCAGTCATGGGGAAGCAG...GTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCGATTCCTCAGGGATCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR GCA 90 bp | CGCCACACTGACTCCCACAATGGGGAACTAGTTTACAGTCCCACCAACAGTGTAAGAGCGAGTCTCAGTTaGTGGTGGCTGTTTCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: RHTDSHNGELVYSPTNSVRASLS*WWLFQR Trigger: CCTTTGAAACAGCCACCAGCAACTGAGACTCGCTCT...TACACTGTTGGTGGGACTGTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR CCA 90 bp | CATCCTGGGGTCTACACTCAATGTCCAGATTCAACAGAGAGCTCCTGGCTGGCCACATGGCAAGCAAAATaGTGGATCTCCTTGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: HPGVYTQCPDSTESSWLATWQAK*WISLCP Trigger: TGGACACAAGGAGATCCACCATTTTGCTTGCCATGT...GGCCAGCCAGGAGCTCTCTGTTGAATCTGGACATTGAGTGTAGACCCCAGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR CCA 90 bp | CATCCTGGGGTCTACACTCAATGTCCAGATTCAACAGAGAGCTCCTGGCTGGCCGCATGTAACACCGTCTaGAATGATGGGATGCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: HPGVYTQCPDSTESSWLAACNTV*NDGMQN Trigger: ATTCTGCATCCCATCATTCCAGACGGTGTTACATGC...GGCCAGCCAGGAGCTCTCTGTTGAATCTGGACATTGAGTGTAGACCCCAGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR CCA 90 bp | TCTAGATCCCTGAGGAATCGCCACACTGACTCCCACAATGGGGAACTAGTTTACAGTCTCCCAGGTAGCTaGGACTACAGGCATGTACCA | + |
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Preference number: 4 (lower is better) Translates to: SRSLRNRHTDSHNGELVYSLPGS*DYRHVP Trigger: TGGTACATGCCTGTAGTCCCAGCTACCTGGGAGACT...GTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCGATTCCTCAGGGATCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR CCA 90 bp | CATCCTGGGGTCTACACTCAATGTCCAGATTCAACAGAGAGCTCCTGGCTGGCCGAGATAAACTCATCCTaGGGTCTACACTCAATGTCC | + |
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Preference number: 4 (lower is better) Translates to: HPGVYTQCPDSTESSWLAEINSS*GLHSMS Trigger: GGACATTGAGTGTAGACCCCAGGATGAGTTTATCTC...GGCCAGCCAGGAGCTCTCTGTTGAATCTGGACATTGAGTGTAGACCCCAGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR GCA 90 bp | GATAAACTCATCCTGGGGTCTACACTCAATGTCCAGATTCAACAGAGAGCTCCTGCCACTAGGAGATGCTaGTTCCCCATGACTGACCGT | + |
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Preference number: 4 (lower is better) Translates to: DKLILGSTLNVQIQQRAPATRRC*FPMTDR Trigger: ACGGTCAGTCATGGGGAAGCAGCATCTCCTAGTGGC...AGGAGCTCTCTGTTGAATCTGGACATTGAGTGTAGACCCCAGGATGAGTTTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR TCA 90 bp | GGGGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACGATGCTGCTTCCCCATaGCTGACCGTCTACACACTC | + |
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Preference number: 4 (lower is better) Translates to: GELVYSPTNSVKVFLFLHDAASP*LTVYTL Trigger: GAGTGTGTAGACGGTCAGTCATGGGGAAGCAGCATC...GTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR TCA 90 bp | TCTAGATCCCTGAGGAATCGCCACACTGACTCCCACAATGGGGAACTAGTTTACTCCTTGATCCAACCATaGAGACATCTCAGTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: SRSLRNRHTDSHNGELVYSLIQP*RHLSLS Trigger: GGAGAGACTGAGATGTCTTCATGGTTGGATCAAGGA...GTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCGATTCCTCAGGGATCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR GCA 90 bp | CATCCTGGGGTCTACACTCAATGTCCAGATTCAACAGAGAGCTCCTGGCTGGCCTGCAGTAAACATGTGTaGATGTGTCTTTATAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HPGVYTQCPDSTESSWLACSKHV*MCLYSS Trigger: GCTGCTATAAAGACACATGCACACATGTTTACTGCA...GGCCAGCCAGGAGCTCTCTGTTGAATCTGGACATTGAGTGTAGACCCCAGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR CCA 90 bp | GATAAACTCATCCTGGGGTCTACACTCAATGTCCAGATTCAACAGAGAGCTCCTTCACTGTGGAGTGATTaGCTCTCTGCATGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DKLILGSTLNVQIQQRAPSLWSD*LSAWRL Trigger: CAGCCTCCATGCAGAGAGCCAATCACTCCACAGTGA...AGGAGCTCTCTGTTGAATCTGGACATTGAGTGTAGACCCCAGGATGAGTTTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR CCA 90 bp | GGGGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACGTAGTCCAGTCATTCTaGGACTCCAGGCATCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: GELVYSPTNSVKVFLFLHVVQSF*DSRHLL Trigger: AAGCAGATGCCTGGAGTCCCAGAATGACTGGACTAC...GTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR CCA 90 bp | CGCCACACTGACTCCCACAATGGGGAACTAGTTTACAGTCCCACCAACAGTGTATACCCAGTAATGGGATaGCTGGGTCAAATGATATTT | + |
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Preference number: 4 (lower is better) Translates to: RHTDSHNGELVYSPTNSVYPVMG*LGQMIF Trigger: AAATATCATTTGACCCAGCCATCCCATTACTGGGTA...TACACTGTTGGTGGGACTGTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR CCA 90 bp | GGGGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACAGTCTCAGTTGCTGGTaGCTGTTTCAAAGGCCACTA | + |
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Preference number: 4 (lower is better) Translates to: GELVYSPTNSVKVFLFLHSLSCW*LFQRPL Trigger: TAGTGGCCTTTGAAACAGCCACCAGCAACTGAGACT...GTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR TCA 90 bp | TTTTTCCTTGATCCAACCATGAAGACATCTCAGTCTCTCCACAACTATTCAAGAAGAAGCCGACGAGGATaGATTGGGTCACTGTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: FFLDPTMKTSQSLHNYSRRSRRG*IGSLWS Trigger: ACTCCACAGTGACCCAATTCATCCTCGTCGGCTTCT...TCTTGAATAGTTGTGGAGAGACTGAGATGTCTTCATGGTTGGATCAAGGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR TCA 90 bp | GGGGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATAGAGAGTGGGGCATaGAATCTTCCCTCTCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: GELVYSPTNSVKVFLFLHIESGA*NLPSLF Trigger: AAAGAGAGAGGGAAGATTTCATGCCCCACTCTCTAT...GTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR TCA 90 bp | GGGGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACGCACCTGTTGTTTCCTaGCTTTTTAGTGATTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: GELVYSPTNSVKVFLFLHAPVVS*LFSDCH Trigger: ATGGCAATCACTAAAAAGTCAGGAAACAACAGGTGC...GTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR GCA 90 bp | GGGGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACGTGGGTTGTTTTGACTaGTTGAATGATGGAGAATTC | + |
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Preference number: 4 (lower is better) Translates to: GELVYSPTNSVKVFLFLHVGCFD*LNDGEF Trigger: GAATTCTCCATCATTCAAGCAGTCAAAACAACCCAC...GTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR CCA 90 bp | TTTTTCCTTGATCCAACCATGAAGACATCTCAGTCTCTCCACAACTATTCAAGAGGCATCCCAAGGTGCTaGAATTATAAGTGTGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: FFLDPTMKTSQSLHNYSRGIPRC*NYKCEP Trigger: TGGCTCACACTTATAATTCCAGCACCTTGGGATGCC...TCTTGAATAGTTGTGGAGAGACTGAGATGTCTTCATGGTTGGATCAAGGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR GCA 90 bp | TTTTTCCTTGATCCAACCATGAAGACATCTCAGTCTCTCCACAACTATTCAAGATCTGGAATGATGGGATaGAGAATGCAGCTAAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FFLDPTMKTSQSLHNYSRSGMMG*RMQLKG Trigger: CCCTTTTAGCTGCATTCTGCATCCCATCATTCCAGA...TCTTGAATAGTTGTGGAGAGACTGAGATGTCTTCATGGTTGGATCAAGGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| 3UTR CAA 72 bp | CACATTTTCTTAATCCAGTCTATCATTGTTGGACATTaGGGTTGGTTCCAAGTCTTTGCTACTGTGAATAGT | + |
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Preference number: 4 (lower is better) Translates to: HIFLIQSIIVGH*GWFQVFATVNS Trigger: ACTATTCACAGTAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR CAA 90 bp | CATCCTGGGGTCTACACTCAATGTCCAGATTCAACAGAGAGCTCCTGGCTGGCCGCCGACGAGGATGAATaGGGTCACTGTGGAGTGATT | + |
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Preference number: 5 (lower is better) Translates to: HPGVYTQCPDSTESSWLAADEDE*GHCGVI Trigger: AATCACTCCACAGTGACCCAATTCATCCTCGTCGGC...GGCCAGCCAGGAGCTCTCTGTTGAATCTGGACATTGAGTGTAGACCCCAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS TCA 90 bp | GAAACCTTGAGAGGACAGGAGCCGATCACGTCTGTAGGAGGTAGCTaGGGGCTGCATGTAACACCGTCTGGAATGATGGGATGCAGAATG | + |
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Preference number: 5 (lower is better) Translates to: ETLRGQEPITSVGGS*GLHVTPSGMMGCRM Trigger: CATTCTGCATCCCATCATTCCAGACGGTGTTACATGCAGCCCTCAGCTACCTCCTACAGACGTGATCGGCTCCTGTCCTCTCAAGGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR CAA 90 bp | TCTAGATCCCTGAGGAATCGCCACACTGACTCCCACAATGGGGAACTAGTTTACAGACAGGAGAATCTCTaGAACCTGGGAGGCGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: SRSLRNRHTDSHNGELVYRQENL*NLGGGG Trigger: ACCTCCGCCTCCCAGGTTCAAGAGATTCTCCTGTCT...GTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCGATTCCTCAGGGATCTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR CAA 90 bp | CATCCTGGGGTCTACACTCAATGTCCAGATTCAACAGAGAGCTCCTGGCTGGCCTTAAATCCCTGCCCATaGGGAAGAGACCATGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: HPGVYTQCPDSTESSWLALNPCP*GRDHEV Trigger: TACCTCATGGTCTCTTCCCAATGGGCAGGGATTTAA...GGCCAGCCAGGAGCTCTCTGTTGAATCTGGACATTGAGTGTAGACCCCAGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS TCA 90 bp | TCACTGTGGAGTGATTGGCTCTCTGCATGGAGGCTGTGCCTGGGGTaGGATGTGACAGGGAGATGTCAGTTACTGCATGAAGAAAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: SLWSDWLSAWRLCLG*DVTGRCQLLHEEKF Trigger: GAACTTTTCTTCATGCAGTAACTGACATCTCCCTGTCACATCTCACCCCAGGCACAGCCTCCATGCAGAGAGCCAATCACTCCACAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334920.3 |
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| CDS GCA 90 bp | AGCGAGTCTCAGTTGCTGGTGGCTGTTTCAAAGGCCACTAGGAGATaGTGCTTCCCCATGACTGACCGTCTACACACTCTTGTTCATATC | + |
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Preference number: 5 (lower is better) Translates to: SESQLLVAVSKATRR*CFPMTDRLHTLVHI Trigger: GATATGAACAAGAGTGTGTAGACGGTCAGTCATGGGGAAGCAGCATCTCCTAGTGGCCTTTGAAACAGCCACCAGCAACTGAGACTCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR CAA 90 bp | TCTAGATCCCTGAGGAATCGCCACACTGACTCCCACAATGGGGAACTAGTTTACCAGAGCGAGTCTCAGTaGCTGGTGGCTGTTTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: SRSLRNRHTDSHNGELVYQSESQ*LVAVSK Trigger: CTTTGAAACAGCCACCAGCAACTGAGACTCGCTCTG...GTAAACTAGTTCCCCATTGTGGGAGTCAGTGTGGCGATTCCTCAGGGATCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS GCA 90 bp | GAGTCTCAGTTGCTGGTGGCTGTTTCAAAGGCCACTAGGAGATGCTaGTTCCCCATGACTGACCGTCTACACACTCTTGTTCATATCAAT | + |
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Preference number: 5 (lower is better) Translates to: ESQLLVAVSKATRRC*FPMTDRLHTLVHIN Trigger: ATTGATATGAACAAGAGTGTGTAGACGGTCAGTCATGGGGAAGCAGCATCTCCTAGTGGCCTTTGAAACAGCCACCAGCAACTGAGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS TCA 90 bp | TGCTGGTGGCTGTTTCAAAGGCCACTAGGAGATGCTGCTTCCCCATaGCTGACCGTCTACACACTCTTGTTCATATCAATTCAGATCACA | + |
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Preference number: 5 (lower is better) Translates to: CWWLFQRPLGDAASP*LTVYTLLFISIQIT Trigger: TGTGATCTGAATTGATATGAACAAGAGTGTGTAGACGGTCAGTCATGGGGAAGCAGCATCTCCTAGTGGCCTTTGAAACAGCCACCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR CAA 90 bp | GGGGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACGTAGGAGGCTCTAGTTaGGAGTTTCTCCACAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: GELVYSPTNSVKVFLFLHVGGSS*EFLHRW Trigger: CCACCTGTGGAGAAACTCCAAACTAGAGCCTCCTAC...GTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS-3UTR CAA 90 bp | GATAAACTCATCCTGGGGTCTACACTCAATGTCCAGATTCAACAGAGAGCTCCTGTAATATGGGATGTTTaGACTGTGGGTTGTTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: DKLILGSTLNVQIQQRAPVIWDV*TVGCFD Trigger: GTCAAAACAACCCACAGTCAAAACATCCCATATTAC...AGGAGCTCTCTGTTGAATCTGGACATTGAGTGTAGACCCCAGGATGAGTTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS CCA 72 bp | CTCCACCCTGGCGACAGAGCGAGTCTCAGTTGCTGGTaGCTGTTTCAAAGGCCACTAGGAGATGCTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LHPGDRASLSCW*LFQRPLGDAAS Trigger: GGAAGCAGCATCTCCTAGTGGCCTTTGAAACAGCCACCAGCAACTGAGACTCGCTCTGTCGCCAGGGTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS CAA 90 bp | ACTCCAGGCATCTGCTTCTGCTTCATCCCAGTAGGAGGCTCTAGTTaGGAGTTTCTCCACAGGTGGGAGCTGACCAGGTGTGGGCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TPGICFCFIPVGGSS*EFLHRWELTRCGLH Trigger: GTGCAGCCCACACCTGGTCAGCTCCCACCTGTGGAGAAACTCCAAACTAGAGCCTCCTACTGGGATGAAGCAGAAGCAGATGCCTGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS CAA 72 bp | AATGGAGGGAGGAAGGAAGGGAGGGAGGGAGAAACCTaGAGAGGACAGGAGCCGATCACGTCTGTAGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: NGGRKEGREGET*RGQEPITSVGG Trigger: ACCTCCTACAGACGTGATCGGCTCCTGTCCTCTCAAGGTTTCTCCCTCCCTCCCTTCCTTCCTCCCTCCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS CAA 72 bp | ATCTGCTTCTGCTTCATCCCAGTAGGAGGCTCTAGTTaGGAGTTTCTCCACAGGTGGGAGCTGACCAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: ICFCFIPVGGSS*EFLHRWELTRC Trigger: ACACCTGGTCAGCTCCCACCTGTGGAGAAACTCCAAACTAGAGCCTCCTACTGGGATGAAGCAGAAGCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS GCA 72 bp | TTGCTGGTGGCTGTTTCAAAGGCCACTAGGAGATGCTaGTTCCCCATGACTGACCGTCTACACACTCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LLVAVSKATRRC*FPMTDRLHTLV Trigger: AACAAGAGTGTGTAGACGGTCAGTCATGGGGAAGCAGCATCTCCTAGTGGCCTTTGAAACAGCCACCAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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| CDS TCA 72 bp | CTGTTTCAAAGGCCACTAGGAGATGCTGCTTCCCCATaGCTGACCGTCTACACACTCTTGTTCATATCAATT | + |
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Preference number: 6 (lower is better) Translates to: LFQRPLGDAASP*LTVYTLLFISI Trigger: AATTGATATGAACAAGAGTGTGTAGACGGTCAGTCATGGGGAAGCAGCATCTCCTAGTGGCCTTTGAAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641419.1 |
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