Pregenerated sensors for OR10C1 (Homo sapiens)
Ensembl gene IDs: ENSG00000229412Ensembl transcript IDs: ENST00000377138.1, ENST00000391549.2, ENST00000428644.1, ENST00000437403.1, ENST00000444197.3, ENST00000455234.1, ENST00000457403.1, ENST00000503212.1, ENST00000546473.2, ENST00000550017.2, ENST00000550132.2, ENST00000551349.2, ENST00000552057.2, ENST00000552404.2, ENST00000552782.2, ENST00000622521.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGGCCAAAGGGGCAGAGGATGAGGAGGGCTGTTGCCAGGATAATCTaGAGTTCATTAAGCGAGGTGTCTCCACATACCAGCTGCAGGACA | + |
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Preference number: 5 (lower is better) Translates to: RPKGQRMRRAVARII*SSLSEVSPHTSCRT Trigger: TGTCCTGCAGCTGGTATGTGGAGACACCTCGCTTAATGAACTGCAGATTATCCTGGCAACAGCCCTCCTCATCCTCTGCCCCTTTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000377138.1 ENST00000391549.2 ENST00000428644.1 ENST00000437403.1 ENST00000444197.3 ENST00000455234.1 ENST00000457403.1 ENST00000503212.1 ENST00000546473.2 ENST00000550017.2 ENST00000550132.2 ENST00000551349.2 ENST00000552057.2 ENST00000552404.2 ENST00000552782.2 ENST00000622521.1 |
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| CDS TCA 90 bp | TCAGTCACCATGGAGGTGTTTGCACTCATCCTGCCTGCATACCTTTaGCTGGAAGACAAAAGAAATGGCAAGGAAAAATCACAACTATGG | + |
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Preference number: 5 (lower is better) Translates to: SVTMEVFALILPAYL*LEDKRNGKEKSQLW Trigger: CCATAGTTGTGATTTTTCCTTGCCATTTCTTTTGTCTTCCAGTCAAAGGTATGCAGGCAGGATGAGTGCAAACACCTCCATGGTGACTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 16 transcripts: ENST00000377138.1 ENST00000391549.2 ENST00000428644.1 ENST00000437403.1 ENST00000444197.3 ENST00000455234.1 ENST00000457403.1 ENST00000503212.1 ENST00000546473.2 ENST00000550017.2 ENST00000550132.2 ENST00000551349.2 ENST00000552057.2 ENST00000552404.2 ENST00000552782.2 ENST00000622521.1 |
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| CDS GCA 90 bp | AAGAAGAAACTCAGTCACCATGGAGGTGTTTGCACTCATCCTGCCTaGATACCTTTGACTGGAAGACAAAAGAAATGGCAAGGAAAAATC | + |
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Preference number: 5 (lower is better) Translates to: KKKLSHHGGVCTHPA*IPLTGRQKKWQGKI Trigger: GATTTTTCCTTGCCATTTCTTTTGTCTTCCAGTCAAAGGTATGCAGGCAGGATGAGTGCAAACACCTCCATGGTGACTGAGTTTCTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 16 transcripts: ENST00000377138.1 ENST00000391549.2 ENST00000428644.1 ENST00000437403.1 ENST00000444197.3 ENST00000455234.1 ENST00000457403.1 ENST00000503212.1 ENST00000546473.2 ENST00000550017.2 ENST00000550132.2 ENST00000551349.2 ENST00000552057.2 ENST00000552404.2 ENST00000552782.2 ENST00000622521.1 |
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| CDS CAA 72 bp | CCTTGCCTGGAGTCCATATTCCACCCTTGCTCACTCTaGGGATCCTGGATGAGTATTTGTCTCTCTGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: PCLESIFHPCSL*GSWMSICLSEP Trigger: AGGCTCAGAGAGACAAATACTCATCCAGGATCCCAAGAGTGAGCAAGGGTGGAATATGGACTCCAGGCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000377138.1 ENST00000391549.2 ENST00000428644.1 ENST00000437403.1 ENST00000444197.3 ENST00000455234.1 ENST00000457403.1 ENST00000503212.1 |
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| CDS GCA 72 bp | ATTAGGCAGCCTTGCCTGGAGTCCATATTCCACCCTTaGTCACTCTTGGGATCCTGGATGAGTATTTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: IRQPCLESIFHP*SLLGSWMSICL Trigger: GAGACAAATACTCATCCAGGATCCCAAGAGTGAGCAAGGGTGGAATATGGACTCCAGGCAAGGCTGCCTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000377138.1 ENST00000391549.2 ENST00000428644.1 ENST00000437403.1 ENST00000444197.3 ENST00000455234.1 ENST00000457403.1 ENST00000503212.1 |
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| CDS CCA 72 bp | GAGTCCATATTCCACCCTTGCTCACTCTTGGGATCCTaGATGAGTATTTGTCTCTCTGAGCCTGAATCCCTG | + |
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Preference number: 6 (lower is better) Translates to: ESIFHPCSLLGS*MSICLSEPESL Trigger: CAGGGATTCAGGCTCAGAGAGACAAATACTCATCCAGGATCCCAAGAGTGAGCAAGGGTGGAATATGGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000377138.1 ENST00000391549.2 ENST00000428644.1 ENST00000437403.1 ENST00000444197.3 ENST00000455234.1 ENST00000457403.1 ENST00000503212.1 |
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| CDS GCA 72 bp | CTCAGTCACCATGGAGGTGTTTGCACTCATCCTGCCTaGATACCTTTGACTGGAAGACAAAAGAAATGGCAA | + |
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Preference number: 6 (lower is better) Translates to: LSHHGGVCTHPA*IPLTGRQKKWQ Trigger: TTGCCATTTCTTTTGTCTTCCAGTCAAAGGTATGCAGGCAGGATGAGTGCAAACACCTCCATGGTGACTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000377138.1 ENST00000391549.2 ENST00000428644.1 ENST00000437403.1 ENST00000444197.3 ENST00000455234.1 ENST00000457403.1 ENST00000503212.1 ENST00000546473.2 ENST00000550017.2 ENST00000550132.2 ENST00000551349.2 ENST00000552057.2 ENST00000552404.2 ENST00000552782.2 ENST00000622521.1 |
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| CDS CCA 72 bp | AGAATATCATGGACTTTGAAATTAGGCAGCCTTGCCTaGAGTCCATATTCCACCCTTGCTCACTCTTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: RISWTLKLGSLA*SPYSTLAHSWD Trigger: ATCCCAAGAGTGAGCAAGGGTGGAATATGGACTCCAGGCAAGGCTGCCTAATTTCAAAGTCCATGATATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000377138.1 ENST00000391549.2 ENST00000428644.1 ENST00000437403.1 ENST00000444197.3 ENST00000455234.1 ENST00000457403.1 ENST00000503212.1 |
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| CDS CAA 90 bp | CTCAGTCACCATGGAGGTGTTTGCACTCATCCTGCCTGCATACCTTaGACTGGAAGACAAAAGAAATGGCAAGGAAAAATCACAACTATG | + |
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Preference number: 6 (lower is better) Translates to: LSHHGGVCTHPACIP*TGRQKKWQGKITTM Trigger: CATAGTTGTGATTTTTCCTTGCCATTTCTTTTGTCTTCCAGTCAAAGGTATGCAGGCAGGATGAGTGCAAACACCTCCATGGTGACTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 16 transcripts: ENST00000377138.1 ENST00000391549.2 ENST00000428644.1 ENST00000437403.1 ENST00000444197.3 ENST00000455234.1 ENST00000457403.1 ENST00000503212.1 ENST00000546473.2 ENST00000550017.2 ENST00000550132.2 ENST00000551349.2 ENST00000552057.2 ENST00000552404.2 ENST00000552782.2 ENST00000622521.1 |
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| CDS TCA 72 bp | GAACATGTTAAACTGTCTTTCCAGTTTTACCTGGGCTaGAGATTAAGTCAGTCTAGCTCCCTTTTCACTCTT | + |
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Preference number: 6 (lower is better) Translates to: EHVKLSFQFYLG*RLSQSSSLFTL Trigger: AAGAGTGAAAAGGGAGCTAGACTGACTTAATCTTCAGCCCAGGTAAAACTGGAAAGACAGTTTAACATGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000377138.1 ENST00000391549.2 ENST00000428644.1 ENST00000437403.1 ENST00000444197.3 ENST00000455234.1 ENST00000457403.1 ENST00000503212.1 |
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