RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR10A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000170790

Ensembl transcript IDs: ENST00000641461.1

Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTGTTCCTTACACACATCATAGTCTCTCAGCACTCCTGTGTTTGTaGATGTGGCACTCTTCTGTTGGAATCCTTTCCCTGAAACTATGT +
Preference number: 1 (lower is better)
Translates to: CVPYTHHSLSALLCL*MWHSSVGILSLKLC
Trigger: ACATAGTTTCAGGGAAAGGATTCCAACAGAAGAGTGCCACATGCACAAACACAGGAGTGCTGAGAGACTATGATGTGTGTAAGGAACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR CCA 90 bp ACTCAGCTTTCCAAAAGCCATTTCAGCAACAGGACTTCATCTTATTaGAGATGTGGAAAGATGCAGAGAGGAATCTCAAATCTGGGACTG +
Preference number: 1 (lower is better)
Translates to: TQLSKSHFSNRTSSY*RCGKMQRGISNLGL
Trigger: CAGTCCCAGATTTGAGATTCCTCTCTGCATCTTTCCACATCTCCAATAAGATGAAGTCCTGTTGCTGAAATGGCTTTTGGAAAGCTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR TCA 90 bp ACCTGCTTCTGGTTCATTCTCTTCAAACCATCCTTGGTTTGTATGTaGTCTGTCTTATCAGCAACTGTCTTACCAGTTGCTGTCTTAACC +
Preference number: 1 (lower is better)
Translates to: TCFWFILFKPSLVCM*SVLSATVLPVAVLT
Trigger: GGTTAAGACAGCAACTGGTAAGACAGTTGCTGATAAGACAGATCACATACAAACCAAGGATGGTTTGAAGAGAATGAACCAGAAGCAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR GCA 90 bp TTCACACGGACTGAAACAATGATAAGAGATATAAATGTGCTTGTCTaGTTCCTCCACCTCAAACCTCCTCTTTGTAGATACCCCATTTCA +
Preference number: 1 (lower is better)
Translates to: FTRTETMIRDINVLV*FLHLKPPLCRYPIS
Trigger: TGAAATGGGGTATCTACAAAGAGGAGGTTTGAGGTGGAGGAAGCAGACAAGCACATTTATATCTCTTATCATTGTTTCAGTCCGTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR CCA 90 bp TTCCAAAAGCCATTTCAGCAACAGGACTTCATCTTATTGGAGATGTaGAAAGATGCAGAGAGGAATCTCAAATCTGGGACTGATTGTTTC +
Preference number: 1 (lower is better)
Translates to: FQKPFQQQDFILLEM*KDAERNLKSGTDCF
Trigger: GAAACAATCAGTCCCAGATTTGAGATTCCTCTCTGCATCTTTCCACATCTCCAATAAGATGAAGTCCTGTTGCTGAAATGGCTTTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR GCA 90 bp TTTATTAATAAACTTGAAATGGGTGCATACAGAAAGAGTGATTTCTaGTTCTTGAGGAATCACAGTGGGGTCTTGAGAGATGGGATAGAT +
Preference number: 1 (lower is better)
Translates to: FINKLEMGAYRKSDF*FLRNHSGVLRDGID
Trigger: ATCTATCCCATCTCTCAAGACCCCACTGTGATTCCTCAAGAAGCAGAAATCACTCTTTCTGTATGCACCCATTTCAAGTTTATTAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR GCA 90 bp AGCAAGTGTTGGAATCCTGGGTGGCTGAGTCCAAGTCAGGGATTTGGCCGACAAAGTGAGCCAAGATTGTaGCATTGCACCCCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: SKCWNPGWLSPSQGFGRQSEPRL*HCTPAA
Trigger: GGCTGCTGGGGTGCAATGGCACAATCTTGGCTCACT...TTGTCGGCCAAATCCCTGACTTGGACTCAGCCACCCAGGATTCCAACACTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR TCA 90 bp ACCTTCTCCAGCTCTACCACCACTGCCTTTAGGTTCTGGATTTATTTTCTCTGGGGCAGGAAGATGGCCTaGGCCCAGGTGTTTGAGGCT +
Preference number: 2 (lower is better)
Translates to: TFSSSTTTAFRFWIYFLWGRKMA*AQVFEA
Trigger: AGCCTCAAACACCTGGGCTCAGGCCATCTTCCTGCC...CCAGAGAAAATAAATCCAGAACCTAAAGGCAGTGGTGGTAGAGCTGGAGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR GCA 90 bp GGTTCTGGATTTATTTTCTCTGGCCTAGAGTATGGTAGGAACCTGCTTCTGGTTCCAGGAGGCGGAGCTTaGAGTGAGCAGAGATGCGCC +
Preference number: 2 (lower is better)
Translates to: GSGFIFSGLEYGRNLLLVPGGGA*SEQRCA
Trigger: GGCGCATCTCTGCTCACTGCAAGCTCCGCCTCCTGG...AACCAGAAGCAGGTTCCTACCATACTCTAGGCCAGAGAAAATAAATCCAGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR TCA 90 bp GGTTCTGGATTTATTTTCTCTGGCCTAGAGTATGGTAGGAACCTGCTTCTGGTTAACCTCCAGCCTCAATaGGCTGCCTGCCTGGGCAGT +
Preference number: 2 (lower is better)
Translates to: GSGFIFSGLEYGRNLLLVNLQPQ*AACLGS
Trigger: ACTGCCCAGGCAGGCAGCTCATTGAGGCTGGAGGTT...AACCAGAAGCAGGTTCCTACCATACTCTAGGCCAGAGAAAATAAATCCAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR GCA 90 bp TCTCTCAGCACTCCTGTGTTTGTGCATGTGGCACTCTTCTGTTGGAATCCTTTCCCAGAAGGCAGAAGTTaGAGTGAGCCAAGATTGTGC +
Preference number: 2 (lower is better)
Translates to: SLSTPVFVHVALFCWNPFPEGRS*SEPRLC
Trigger: GCACAATCTTGGCTCACTGCAACTTCTGCCTTCTGG...GAAAGGATTCCAACAGAAGAGTGCCACATGCACAAACACAGGAGTGCTGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR CCA 90 bp TCTCTCAGCACTCCTGTGTTTGTGCATGTGGCACTCTTCTGTTGGAATCCTTTCCTTGAGGAATCACAGTaGGGTCTTGAGAGATGGGAT +
Preference number: 2 (lower is better)
Translates to: SLSTPVFVHVALFCWNPFLEESQ*GLERWD
Trigger: ATCCCATCTCTCAAGACCCCACTGTGATTCCTCAAG...GAAAGGATTCCAACAGAAGAGTGCCACATGCACAAACACAGGAGTGCTGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR TCA 90 bp TCTCTCAGCACTCCTGTGTTTGTGCATGTGGCACTCTTCTGTTGGAATCCTTTCGGCATGAGAATTGATTaGACCCAGAAGGCAGAAGTT +
Preference number: 2 (lower is better)
Translates to: SLSTPVFVHVALFCWNPFGMRID*TQKAEV
Trigger: AACTTCTGCCTTCTGGGTTCAATCAATTCTCATGCC...GAAAGGATTCCAACAGAAGAGTGCCACATGCACAAACACAGGAGTGCTGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR GCA 90 bp AAGTGTTGGAATCCTGGGTGGCTGAGTCCAAGTCAGGGATTTGGCCGACAAGTGATCTACTCTCATACATaGATACTGCATACCAGTAAG +
Preference number: 2 (lower is better)
Translates to: KCWNPGWLSPSQGFGRQVIYSHT*ILHTSK
Trigger: CTTACTGGTATGCAGTATGCATGTATGAGAGTAGAT...CACTTGTCGGCCAAATCCCTGACTTGGACTCAGCCACCCAGGATTCCAACACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR TCA 90 bp GGTTCTGGATTTATTTTCTCTGGCCTAGAGTATGGTAGGAACCTGCTTCTGGTTGGCAGAAGGATTGCTTaGACTCAGAAGTTCGATACC +
Preference number: 2 (lower is better)
Translates to: GSGFIFSGLEYGRNLLLVGRRIA*TQKFDT
Trigger: GGTATCGAACTTCTGAGTTCAAGCAATCCTTCTGCC...AACCAGAAGCAGGTTCCTACCATACTCTAGGCCAGAGAAAATAAATCCAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR CCA 90 bp AAGTGTTGGAATCCTGGGTGGCTGAGTCCAAGTCAGGGATTTGGCCGACAAGTGGTAACATTGGAGAACTaGAATACCACTTTCATAGTT +
Preference number: 2 (lower is better)
Translates to: KCWNPGWLSPSQGFGRQVVTLEN*NTTFIV
Trigger: AACTATGAAAGTGGTATTCCAGTTCTCCAATGTTAC...CACTTGTCGGCCAAATCCCTGACTTGGACTCAGCCACCCAGGATTCCAACACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR CAA 90 bp CTTTGTGTTCCTTACACACATCATAGTCTCTCAGCACTCCTGTGTTaGTGCATGTGGCACTCTTCTGTTGGAATCCTTTCCCTGAAACTA +
Preference number: 2 (lower is better)
Translates to: LCVPYTHHSLSALLC*CMWHSSVGILSLKL
Trigger: TAGTTTCAGGGAAAGGATTCCAACAGAAGAGTGCCACATGCACAAACACAGGAGTGCTGAGAGACTATGATGTGTGTAAGGAACACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR CCA 90 bp TCTCTCAGCACTCCTGTGTTTGTGCATGTGGCACTCTTCTGTTGGAATCCTTTCCTCATAAATTGCTGGTaGGAGCATAAAATGGTGCAA +
Preference number: 2 (lower is better)
Translates to: SLSTPVFVHVALFCWNPFLINCW*EHKMVQ
Trigger: TTGCACCATTTTATGCTCCCACCAGCAATTTATGAG...GAAAGGATTCCAACAGAAGAGTGCCACATGCACAAACACAGGAGTGCTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR CAA 90 bp CACTCAGCTTTCCAAAAGCCATTTCAGCAACAGGACTTCATCTTATaGGAGATGTGGAAAGATGCAGAGAGGAATCTCAAATCTGGGACT +
Preference number: 2 (lower is better)
Translates to: HSAFQKPFQQQDFIL*EMWKDAERNLKSGT
Trigger: AGTCCCAGATTTGAGATTCCTCTCTGCATCTTTCCACATCTCCAATAAGATGAAGTCCTGTTGCTGAAATGGCTTTTGGAAAGCTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR TCA 90 bp TTTACCCATACTAAGGACTACCCCCTACCCCAGTACAAATTGTCTCAGCATCAAAATGAAGTAAGATGGTaGGGAGAGTTATGTGTTGGG +
Preference number: 2 (lower is better)
Translates to: FTHTKDYPLPQYKLSQHQNEVRW*GELCVG
Trigger: CCCAACACATAACTCTCCTCACCATCTTACTTCATT...TTGATGCTGAGACAATTTGTACTGGGGTAGGGGGTAGTCCTTAGTATGGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR TCA 90 bp ACCTTCTCCAGCTCTACCACCACTGCCTTTAGGTTCTGGATTTATTTTCTCTGGAATCCCCAGTGTAGCTaGTTTTTCAGTGACACAAAA +
Preference number: 2 (lower is better)
Translates to: TFSSSTTTAFRFWIYFLWNPQCS*FFSDTK
Trigger: TTTTGTGTCACTGAAAAATCAGCTACACTGGGGATT...CCAGAGAAAATAAATCCAGAACCTAAAGGCAGTGGTGGTAGAGCTGGAGAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR GCA 90 bp ACCTTCTCCAGCTCTACCACCACTGCCTTTAGGTTCTGGATTTATTTTCTCTGGCTCTGTTACTATGTGTaGCCCCATGTTATAATGACT +
Preference number: 2 (lower is better)
Translates to: TFSSSTTTAFRFWIYFLWLCYYV*PHVIMT
Trigger: AGTCATTATAACATGGGGGCACACATAGTAACAGAG...CCAGAGAAAATAAATCCAGAACCTAAAGGCAGTGGTGGTAGAGCTGGAGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR CCA 90 bp ACCTTCTCCAGCTCTACCACCACTGCCTTTAGGTTCTGGATTTATTTTCTCTGGAGGACTTCATCTTATTaGAGATGTGGAAAGATGCAG +
Preference number: 2 (lower is better)
Translates to: TFSSSTTTAFRFWIYFLWRTSSY*RCGKMQ
Trigger: CTGCATCTTTCCACATCTCCAATAAGATGAAGTCCT...CCAGAGAAAATAAATCCAGAACCTAAAGGCAGTGGTGGTAGAGCTGGAGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR GCA 90 bp ACCTTCTCCAGCTCTACCACCACTGCCTTTAGGTTCTGGATTTATTTTCTCTGGTCAGTGACACAAAAATaGTTTGTGTTCCTTACACAC +
Preference number: 2 (lower is better)
Translates to: TFSSSTTTAFRFWIYFLWSVTQK*FVFLTH
Trigger: GTGTGTAAGGAACACAAAGCATTTTTGTGTCACTGA...CCAGAGAAAATAAATCCAGAACCTAAAGGCAGTGGTGGTAGAGCTGGAGAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR CAA 90 bp AATAAACTTGAAATGGGTGCATACAGAAAGAGTGATTTCTGCTTCTaGAGGAATCACAGTGGGGTCTTGAGAGATGGGATAGATTTGGCT +
Preference number: 2 (lower is better)
Translates to: NKLEMGAYRKSDFCF*RNHSGVLRDGIDLA
Trigger: AGCCAAATCTATCCCATCTCTCAAGACCCCACTGTGATTCCTCAAGAAGCAGAAATCACTCTTTCTGTATGCACCCATTTCAAGTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR TCA 90 bp TTTACCCATACTAAGGACTACCCCCTACCCCAGTACAAATTGTCTCAGCATCAAATGCATGTGAACTTTTaGTCTACTCTCATACATGCA +
Preference number: 2 (lower is better)
Translates to: FTHTKDYPLPQYKLSQHQMHVNF*STLIHA
Trigger: TGCATGTATGAGAGTAGATCAAAAGTTCACATGCAT...TTGATGCTGAGACAATTTGTACTGGGGTAGGGGGTAGTCCTTAGTATGGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR TCA 90 bp TTTACCCATACTAAGGACTACCCCCTACCCCAGTACAAATTGTCTCAGCATCAAGAGAAATGTTATTGTTaGGTTGTGGGGAAACAAACA +
Preference number: 2 (lower is better)
Translates to: FTHTKDYPLPQYKLSQHQEKCYC*VVGKQT
Trigger: TGTTTGTTTCCCCACAACTCAACAATAACATTTCTC...TTGATGCTGAGACAATTTGTACTGGGGTAGGGGGTAGTCCTTAGTATGGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR CCA 90 bp GGTTCTGGATTTATTTTCTCTGGCCTAGAGTATGGTAGGAACCTGCTTCTGGTTTCTTCAAACCATCCTTaGTTTGTATGTGATCTGTCT +
Preference number: 2 (lower is better)
Translates to: GSGFIFSGLEYGRNLLLVSSNHP*FVCDLS
Trigger: AGACAGATCACATACAAACCAAGGATGGTTTGAAGA...AACCAGAAGCAGGTTCCTACCATACTCTAGGCCAGAGAAAATAAATCCAGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR TCA 90 bp TTAGGTTCTGGATTTATTTTCTCTGGCCTAGAGTATGGTAGGAACCTGCTTCTGAAAGGCATATGCATGTaGACTTTTGATCTACTCTCA +
Preference number: 2 (lower is better)
Translates to: LGSGFIFSGLEYGRNLLLKGICM*TFDLLS
Trigger: TGAGAGTAGATCAAAAGTTCACATGCATATGCCTTT...CAGAAGCAGGTTCCTACCATACTCTAGGCCAGAGAAAATAAATCCAGAACCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR CAA 90 bp AGCAAGTGTTGGAATCCTGGGTGGCTGAGTCCAAGTCAGGGATTTGGCCGACAAAGAAAAGAGAAACACTaGTGTTGCATGCAATGGCTC +
Preference number: 3 (lower is better)
Translates to: SKCWNPGWLSPSQGFGRQRKEKH*CCMQWL
Trigger: GAGCCATTGCATGCAACACAAGTGTTTCTCTTTTCT...TTGTCGGCCAAATCCCTGACTTGGACTCAGCCACCCAGGATTCCAACACTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR CAA 90 bp AGCAAGTGTTGGAATCCTGGGTGGCTGAGTCCAAGTCAGGGATTTGGCCGACAATCTGGGAACCAAATGTaGTTTCTACTAATGCCTTGT +
Preference number: 3 (lower is better)
Translates to: SKCWNPGWLSPSQGFGRQSGNQM*FLLMPC
Trigger: ACAAGGCATTAGTAGAAACAACATTTGGTTCCCAGA...TTGTCGGCCAAATCCCTGACTTGGACTCAGCCACCCAGGATTCCAACACTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR CAA 90 bp TTTACCCATACTAAGGACTACCCCCTACCCCAGTACAAATTGTCTCAGCATCAAAGTGATTTCTGCTTCTaGAGGAATCACAGTGGGGTC +
Preference number: 3 (lower is better)
Translates to: FTHTKDYPLPQYKLSQHQSDFCF*RNHSGV
Trigger: GACCCCACTGTGATTCCTCAAGAAGCAGAAATCACT...TTGATGCTGAGACAATTTGTACTGGGGTAGGGGGTAGTCCTTAGTATGGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR CCA 72 bp CATCATAGTCTCTCAGCACTCCTGTGTTTGTGCATGTaGCACTCTTCTGTTGGAATCCTTTCCCTGAAACTA +
Preference number: 3 (lower is better)
Translates to: HHSLSALLCLCM*HSSVGILSLKL
Trigger: TAGTTTCAGGGAAAGGATTCCAACAGAAGAGTGCCACATGCACAAACACAGGAGTGCTGAGAGACTATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR CAA 90 bp ACCTTCTCCAGCTCTACCACCACTGCCTTTAGGTTCTGGATTTATTTTCTCTGGCAGGACTTCATCTTATaGGAGATGTGGAAAGATGCA +
Preference number: 3 (lower is better)
Translates to: TFSSSTTTAFRFWIYFLWQDFIL*EMWKDA
Trigger: TGCATCTTTCCACATCTCCAATAAGATGAAGTCCTG...CCAGAGAAAATAAATCCAGAACCTAAAGGCAGTGGTGGTAGAGCTGGAGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR CAA 90 bp CTTTGTGTTCCTTACACACATCATAGTCTCTCAGCACTCCTGTGTTTGTGCATGCTACCCCAGTACAAATaGTCTCAGCATCAAGCATCA +
Preference number: 3 (lower is better)
Translates to: LCVPYTHHSLSALLCLCMLPQYK*SQHQAS
Trigger: TGATGCTTGATGCTGAGACAATTTGTACTGGGGTAG...CATGCACAAACACAGGAGTGCTGAGAGACTATGATGTGTGTAAGGAACACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR CAA 90 bp TTAGGTTCTGGATTTATTTTCTCTGGCCTAGAGTATGGTAGGAACCTGCTTCTGAGGCAGAAGGATTGCTaGAACTCAGAAGTTCGATAC +
Preference number: 3 (lower is better)
Translates to: LGSGFIFSGLEYGRNLLLRQKDC*NSEVRY
Trigger: GTATCGAACTTCTGAGTTCAAGCAATCCTTCTGCCT...CAGAAGCAGGTTCCTACCATACTCTAGGCCAGAGAAAATAAATCCAGAACCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR CCA 72 bp AGCACTCCTGTGTTTGTGCATGTGGCACTCTTCTGTTaGAATCCTTTCCCTGAAACTATGTACAACTTTTTC +
Preference number: 3 (lower is better)
Translates to: STPVFVHVALFC*NPFPETMYNFF
Trigger: GAAAAAGTTGTACATAGTTTCAGGGAAAGGATTCCAACAGAAGAGTGCCACATGCACAAACACAGGAGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR CAA 90 bp ACCTTCTCCAGCTCTACCACCACTGCCTTTAGGTTCTGGATTTATTTTCTCTGGTATGCATGTGAACTTTaGATCTACTCTCATACATGC +
Preference number: 3 (lower is better)
Translates to: TFSSSTTTAFRFWIYFLWYACEL*IYSHTC
Trigger: GCATGTATGAGAGTAGATCAAAAGTTCACATGCATA...CCAGAGAAAATAAATCCAGAACCTAAAGGCAGTGGTGGTAGAGCTGGAGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR-3UTR CAA 90 bp GGTTCTGGATTTATTTTCTCTGGCCTAGAGTATGGTAGGAACCTGCTTCTGGTTACTTATTCTGGAGCTTaGTTCTCATCAAAGCAAAGC +
Preference number: 3 (lower is better)
Translates to: GSGFIFSGLEYGRNLLLVTYSGA*FSSKQS
Trigger: GCTTTGCTTTGATGAGAACAAAGCTCCAGAATAAGT...AACCAGAAGCAGGTTCCTACCATACTCTAGGCCAGAGAAAATAAATCCAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR GCA 72 bp TATGTGATCTGTCTTATCAGCAACTGTCTTACCAGTTaGTGTCTTAACCAGCAACTCTGGTTAAGTCACTTA +
Preference number: 3 (lower is better)
Translates to: YVICLISNCLTS*CLNQQLWLSHL
Trigger: TAAGTGACTTAACCAGAGTTGCTGGTTAAGACAGCAACTGGTAAGACAGTTGCTGATAAGACAGATCACATA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR CCA 72 bp TCCAAAAGCCATTTCAGCAACAGGACTTCATCTTATTaGAGATGTGGAAAGATGCAGAGAGGAATCTCAAAT +
Preference number: 3 (lower is better)
Translates to: SKSHFSNRTSSY*RCGKMQRGISN
Trigger: ATTTGAGATTCCTCTCTGCATCTTTCCACATCTCCAATAAGATGAAGTCCTGTTGCTGAAATGGCTTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR GCA 72 bp ACTGAAACAATGATAAGAGATATAAATGTGCTTGTCTaGTTCCTCCACCTCAAACCTCCTCTTTGTAGATAC +
Preference number: 3 (lower is better)
Translates to: TETMIRDINVLV*FLHLKPPLCRY
Trigger: GTATCTACAAAGAGGAGGTTTGAGGTGGAGGAAGCAGACAAGCACATTTATATCTCTTATCATTGTTTCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR GCA 90 bp AGCAAGTGTTGGAATCCTGGGTGGCTGAGTCCAAGTCAGGGATTTGGCCGACAACCAGGAGGCGGAGCTTaGAGTGAGCAGAGATGCGCC +
Preference number: 4 (lower is better)
Translates to: SKCWNPGWLSPSQGFGRQPGGGA*SEQRCA
Trigger: GGCGCATCTCTGCTCACTGCAAGCTCCGCCTCCTGG...TTGTCGGCCAAATCCCTGACTTGGACTCAGCCACCCAGGATTCCAACACTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR TCA 90 bp AGCAAGTGTTGGAATCCTGGGTGGCTGAGTCCAAGTCAGGGATTTGGCCGACAAGGCAGGAAGATGGCCTaGGCCCAGGTGTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SKCWNPGWLSPSQGFGRQGRKMA*AQVFEA
Trigger: AGCCTCAAACACCTGGGCTCAGGCCATCTTCCTGCC...TTGTCGGCCAAATCCCTGACTTGGACTCAGCCACCCAGGATTCCAACACTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp AAGTGTTGGAATCCTGGGTGGCTGAGTCCAAGTCAGGGATTTGGCCGACAAGTGGCTCACTATGAAGTTTaGCCATGCTCCCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KCWNPGWLSPSQGFGRQVAHYEV*PCSQSW
Trigger: CCAGGACTGGGAGCATGGCCAAACTTCATAGTGAGC...CACTTGTCGGCCAAATCCCTGACTTGGACTCAGCCACCCAGGATTCCAACACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR TCA 90 bp AGCAAGTGTTGGAATCCTGGGTGGCTGAGTCCAAGTCAGGGATTTGGCCGACAAGGCAGAAGGATTGCTTaGACTCAGAAGTTCGATACC +
Preference number: 4 (lower is better)
Translates to: SKCWNPGWLSPSQGFGRQGRRIA*TQKFDT
Trigger: GGTATCGAACTTCTGAGTTCAAGCAATCCTTCTGCC...TTGTCGGCCAAATCCCTGACTTGGACTCAGCCACCCAGGATTCCAACACTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR TCA 90 bp CTTTGTGTTCCTTACACACATCATAGTCTCTCAGCACTCCTGTGTTTGTGCATGAACCTCCAGCCTCAATaGGCTGCCTGCCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LCVPYTHHSLSALLCLCMNLQPQ*AACLGS
Trigger: ACTGCCCAGGCAGGCAGCTCATTGAGGCTGGAGGTT...CATGCACAAACACAGGAGTGCTGAGAGACTATGATGTGTGTAAGGAACACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR GCA 90 bp AAGTGTTGGAATCCTGGGTGGCTGAGTCCAAGTCAGGGATTTGGCCGACAAGTGGCACTCCTGTGTTTGTaGATGTGGCACTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: KCWNPGWLSPSQGFGRQVALLCL*MWHSSV
Trigger: AACAGAAGAGTGCCACATGCACAAACACAGGAGTGC...CACTTGTCGGCCAAATCCCTGACTTGGACTCAGCCACCCAGGATTCCAACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR TCA 90 bp ACCTTCTCCAGCTCTACCACCACTGCCTTTAGGTTCTGGATTTATTTTCTCTGGATTCCCTGTCCTGGCTaGGCTATTAATGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TFSSSTTTAFRFWIYFLWIPCPG*AINGWS
Trigger: GCTCCAGCCATTAATAGCTCAGCCAGGACAGGGAAT...CCAGAGAAAATAAATCCAGAACCTAAAGGCAGTGGTGGTAGAGCTGGAGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR GCA 90 bp AGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCCTTGCAGAGATGCGCCACTaGACTCCAGCCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: RGISNLGLIVSHPVKCSLAEMRH*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCAGTGGCGCATCTCTGC...AAGGCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR GCA 90 bp AGCAAGTGTTGGAATCCTGGGTGGCTGAGTCCAAGTCAGGGATTTGGCCGACAAGAGAAACACTTGTGTTaGATGCAATGGCTCACACTT +
Preference number: 4 (lower is better)
Translates to: SKCWNPGWLSPSQGFGRQEKHLC*MQWLTL
Trigger: AAGTGTGAGCCATTGCATGCAACACAAGTGTTTCTC...TTGTCGGCCAAATCCCTGACTTGGACTCAGCCACCCAGGATTCCAACACTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp AAGTGTTGGAATCCTGGGTGGCTGAGTCCAAGTCAGGGATTTGGCCGACAAGTGAATGTAAGTCTACAATaGGCAGGCAGAGGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: KCWNPGWLSPSQGFGRQVNVSLQ*AGRGVF
Trigger: GAAAACTCCTCTGCCTGCCCATTGTAGACTTACATT...CACTTGTCGGCCAAATCCCTGACTTGGACTCAGCCACCCAGGATTCCAACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp AAGTGTTGGAATCCTGGGTGGCTGAGTCCAAGTCAGGGATTTGGCCGACAAGTGAGAAGTCCCCAACTGTaGTCATGGAGAAAGATTATT +
Preference number: 4 (lower is better)
Translates to: KCWNPGWLSPSQGFGRQVRSPQL*SWRKII
Trigger: AATAATCTTTCTCCATGACCACAGTTGGGGACTTCT...CACTTGTCGGCCAAATCCCTGACTTGGACTCAGCCACCCAGGATTCCAACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp AGCAAGTGTTGGAATCCTGGGTGGCTGAGTCCAAGTCAGGGATTTGGCCGACAACTCATAAATTGCTGGTaGGAGCATAAAATGGTGCAA +
Preference number: 4 (lower is better)
Translates to: SKCWNPGWLSPSQGFGRQLINCW*EHKMVQ
Trigger: TTGCACCATTTTATGCTCCCACCAGCAATTTATGAG...TTGTCGGCCAAATCCCTGACTTGGACTCAGCCACCCAGGATTCCAACACTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR TCA 90 bp ACCTTCTCCAGCTCTACCACCACTGCCTTTAGGTTCTGGATTTATTTTCTCTGGCAAGTAAGCTCACTATaGAGTTTGGCCATGCTCCCA +
Preference number: 4 (lower is better)
Translates to: TFSSSTTTAFRFWIYFLWQVSSL*SLAMLP
Trigger: TGGGAGCATGGCCAAACTTCATAGTGAGCTTACTTG...CCAGAGAAAATAAATCCAGAACCTAAAGGCAGTGGTGGTAGAGCTGGAGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR GCA 90 bp CAGAGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCAGTGAGCCAAGATTGTaGCATTGCACCCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QRGISNLGLIVSHPVKCSSEPRL*HCTPAA
Trigger: GGCTGCTGGGGTGCAATGGCACAATCTTGGCTCACT...GCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR CAA 72 bp CCTTACACACATCATAGTCTCTCAGCACTCCTGTGTTaGTGCATGTGGCACTCTTCTGTTGGAATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: PYTHHSLSALLC*CMWHSSVGILS
Trigger: GGAAAGGATTCCAACAGAAGAGTGCCACATGCACAAACACAGGAGTGCTGAGAGACTATGATGTGTGTAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR TCA 90 bp CTTTGTGTTCCTTACACACATCATAGTCTCTCAGCACTCCTGTGTTTGTGCATGAGTTTCCCATCAGGGTaGCCAGGTAGATGGTTAGAA +
Preference number: 4 (lower is better)
Translates to: LCVPYTHHSLSALLCLCMSFPSG*PGRWLE
Trigger: TTCTAACCATCTACCTGGTCACCCTGATGGGAAACT...CATGCACAAACACAGGAGTGCTGAGAGACTATGATGTGTGTAAGGAACACAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR TCA 90 bp AGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCCTTGGAATCCTGGGTGGCTaGGTCCAAGTCAGGGATTTG +
Preference number: 4 (lower is better)
Translates to: RGISNLGLIVSHPVKCSLGILGG*VQVRDL
Trigger: CAAATCCCTGACTTGGACTCAGCCACCCAGGATTCC...AAGGCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR GCA 90 bp GGTTCTGGATTTATTTTCTCTGGCCTAGAGTATGGTAGGAACCTGCTTCTGGTTTCCAACAGGAACATCTaGCTTGTTCAACTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GSGFIFSGLEYGRNLLLVSNRNI*LVQLWL
Trigger: CAGCCAGAGTTGAACAAGGCAGATGTTCCTGTTGGA...AACCAGAAGCAGGTTCCTACCATACTCTAGGCCAGAGAAAATAAATCCAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR TCA 90 bp TCTCTCAGCACTCCTGTGTTTGTGCATGTGGCACTCTTCTGTTGGAATCCTTTCTACAGTCAAGGAATCTaGGACACAGATAAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: SLSTPVFVHVALFCWNPFYSQGI*DTDKLS
Trigger: ACTCAACTTATCTGTGTCTCAGATTCCTTGACTGTA...GAAAGGATTCCAACAGAAGAGTGCCACATGCACAAACACAGGAGTGCTGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp ATGCAGAGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTTCCCAGTCCTGGTTTTaGGAGAGTTGTTCCCACCTG +
Preference number: 4 (lower is better)
Translates to: MQRGISNLGLIVSHPVKCSQSWF*ESCSHL
Trigger: CAGGTGGGAACAACTCTCCCAAAACCAGGACTGGGA...ACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCTCTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp GGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCCTTACTCCATGCTCCCAGTCCTaGTTTTGGGAGAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: GISNLGLIVSHPVKCSLTPCSQS*FWESCS
Trigger: GGAACAACTCTCCCAAAACCAGGACTGGGAGCATGG...AGTAAGGCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp CAGAGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCTCCAAGTCAGGGATTTaGCCGACAAGTGACACTTGC +
Preference number: 4 (lower is better)
Translates to: QRGISNLGLIVSHPVKCSSKSGI*PTSDTC
Trigger: GCAAGTGTCACTTGTCGGCCAAATCCCTGACTTGGA...GCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp GGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCCTTACTTGTTGGAATCCTGGGTaGCTGAGTCCAAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GISNLGLIVSHPVKCSLTCWNPG*LSPSQG
Trigger: TCCCTGACTTGGACTCAGCCACCCAGGATTCCAACA...AGTAAGGCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp GATGCAGAGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGCAAGTGTTGGAATCCTaGGTGGCTGAGTCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: DAERNLKSGTDCFSSSKMQVLES*VAESKS
Trigger: TGACTTGGACTCAGCCACCCAGGATTCCAACACTTG...CATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCTCTGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR TCA 90 bp TCTCTCAGCACTCCTGTGTTTGTGCATGTGGCACTCTTCTGTTGGAATCCTTTCATGCATGTGAACTTTTaGTCTACTCTCATACATGCA +
Preference number: 4 (lower is better)
Translates to: SLSTPVFVHVALFCWNPFMHVNF*STLIHA
Trigger: TGCATGTATGAGAGTAGATCAAAAGTTCACATGCAT...GAAAGGATTCCAACAGAAGAGTGCCACATGCACAAACACAGGAGTGCTGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR GCA 90 bp GGTTCTGGATTTATTTTCTCTGGCCTAGAGTATGGTAGGAACCTGCTTCTGGTTGGAGATGTGGAAAGATaGAGAGAGGAATCTCAAATC +
Preference number: 4 (lower is better)
Translates to: GSGFIFSGLEYGRNLLLVGDVER*REESQI
Trigger: GATTTGAGATTCCTCTCTGCATCTTTCCACATCTCC...AACCAGAAGCAGGTTCCTACCATACTCTAGGCCAGAGAAAATAAATCCAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR GCA 90 bp TCTCTCAGCACTCCTGTGTTTGTGCATGTGGCACTCTTCTGTTGGAATCCTTTCAAACACCTCATAAATTaGTGGTGGGAGCATAAAATG +
Preference number: 4 (lower is better)
Translates to: SLSTPVFVHVALFCWNPFKHLIN*WWEHKM
Trigger: CATTTTATGCTCCCACCAGCAATTTATGAGGTGTTT...GAAAGGATTCCAACAGAAGAGTGCCACATGCACAAACACAGGAGTGCTGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR GCA 90 bp AGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCCTTCCAGAAGGCAGAAGTTaGAGTGAGCCAAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: RGISNLGLIVSHPVKCSLPEGRS*SEPRLC
Trigger: GCACAATCTTGGCTCACTGCAACTTCTGCCTTCTGG...AAGGCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp CAGAGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCCTTGAGGAATCACAGTaGGGTCTTGAGAGATGGGAT +
Preference number: 4 (lower is better)
Translates to: QRGISNLGLIVSHPVKCSLEESQ*GLERWD
Trigger: ATCCCATCTCTCAAGACCCCACTGTGATTCCTCAAG...GCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR TCA 90 bp GATGCAGAGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGGGCATGAGAATTGATTaGACCCAGAAGGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: DAERNLKSGTDCFSSSKMGMRID*TQKAEV
Trigger: AACTTCTGCCTTCTGGGTTCAATCAATTCTCATGCC...CATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCTCTGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR GCA 90 bp GGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCCTTACTTATGAAGTTTGGCCATaGTCCCAGTCCTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: GISNLGLIVSHPVKCSLTYEVWP*SQSWFW
Trigger: CCAAAACCAGGACTGGGAGCATGGCCAAACTTCATA...AGTAAGGCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR GCA 90 bp CTTTGTGTTCCTTACACACATCATAGTCTCTCAGCACTCCTGTGTTTGTGCATGATGATAGCAGCTTCTTaGCCTCAGGTGAATTATTTG +
Preference number: 4 (lower is better)
Translates to: LCVPYTHHSLSALLCLCMMIAAS*PQVNYL
Trigger: CAAATAATTCACCTGAGGGCAAGAAGCTGCTATCAT...CATGCACAAACACAGGAGTGCTGAGAGACTATGATGTGTGTAAGGAACACAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR GCA 90 bp TTAGGTTCTGGATTTATTTTCTCTGGCCTAGAGTATGGTAGGAACCTGCTTCTGAGCAGTTTCATATTGTaGACAATGCACGTCACACAG +
Preference number: 4 (lower is better)
Translates to: LGSGFIFSGLEYGRNLLLSSFIL*TMHVTQ
Trigger: CTGTGTGACGTGCATTGTGCACAATATGAAACTGCT...CAGAAGCAGGTTCCTACCATACTCTAGGCCAGAGAAAATAAATCCAGAACCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp GGTTCTGGATTTATTTTCTCTGGCCTAGAGTATGGTAGGAACCTGCTTCTGGTTAGGACTTCATCTTATTaGAGATGTGGAAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: GSGFIFSGLEYGRNLLLVRTSSY*RCGKMQ
Trigger: CTGCATCTTTCCACATCTCCAATAAGATGAAGTCCT...AACCAGAAGCAGGTTCCTACCATACTCTAGGCCAGAGAAAATAAATCCAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp GATGCAGAGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGACACCTGGAAATAGTTaGCCACAGAAGTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: DAERNLKSGTDCFSSSKMTPGNS*PQKCCH
Trigger: ATGACAGCACTTCTGTGGCCAACTATTTCCAGGTGT...CATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCTCTGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp TTTACCCATACTAAGGACTACCCCCTACCCCAGTACAAATTGTCTCAGCATCAAACTGCCTTTAGGTTCTaGATTTATTTTCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: FTHTKDYPLPQYKLSQHQTAFRF*IYFLWP
Trigger: AGGCCAGAGAAAATAAATCCAGAACCTAAAGGCAGT...TTGATGCTGAGACAATTTGTACTGGGGTAGGGGGTAGTCCTTAGTATGGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR TCA 90 bp GGTTCTGGATTTATTTTCTCTGGCCTAGAGTATGGTAGGAACCTGCTTCTGGTTGAGAAATGTTATTGTTaGGTTGTGGGGAAACAAACA +
Preference number: 4 (lower is better)
Translates to: GSGFIFSGLEYGRNLLLVEKCYC*VVGKQT
Trigger: TGTTTGTTTCCCCACAACTCAACAATAACATTTCTC...AACCAGAAGCAGGTTCCTACCATACTCTAGGCCAGAGAAAATAAATCCAGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp CTTTGTGTTCCTTACACACATCATAGTCTCTCAGCACTCCTGTGTTTGTGCATGTCAGGTTGTTTTTCTTaGGAAGAATCTAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LCVPYTHHSLSALLCLCMSGCFS*EESSVK
Trigger: CTTCACACTAGATTCTTCCCAAGAAAAACAACCTGA...CATGCACAAACACAGGAGTGCTGAGAGACTATGATGTGTGTAAGGAACACAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp GGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCCTTACTGGTGGGAGCATAAAATaGTGCAATAAGTTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GISNLGLIVSHPVKCSLTGGSIK*CNKFRG
Trigger: CCCTCTGAACTTATTGCACCATTTTATGCTCCCACC...AGTAAGGCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp GATGCAGAGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGACTCCGTATGGCCCCTaGGATAAAGTAAATCCTTTA +
Preference number: 4 (lower is better)
Translates to: DAERNLKSGTDCFSSSKMTPYGP*DKVNPL
Trigger: TAAAGGATTTACTTTATCCCAGGGGCCATACGGAGT...CATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCTCTGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR TCA 90 bp AGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCCTTAATGAAGTAAGATGGTaGGGAGAGTTATGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: RGISNLGLIVSHPVKCSLNEVRW*GELCVG
Trigger: CCCAACACATAACTCTCCTCACCATCTTACTTCATT...AAGGCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR GCA 90 bp GATGCAGAGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGCTCTGTTACTATGTGTaGCCCCATGTTATAATGACT +
Preference number: 4 (lower is better)
Translates to: DAERNLKSGTDCFSSSKMLCYYV*PHVIMT
Trigger: AGTCATTATAACATGGGGGCACACATAGTAACAGAG...CATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCTCTGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR GCA 90 bp TTAGGTTCTGGATTTATTTTCTCTGGCCTAGAGTATGGTAGGAACCTGCTTCTGTCAGTGACACAAAAATaGTTTGTGTTCCTTACACAC +
Preference number: 4 (lower is better)
Translates to: LGSGFIFSGLEYGRNLLLSVTQK*FVFLTH
Trigger: GTGTGTAAGGAACACAAAGCATTTTTGTGTCACTGA...CAGAAGCAGGTTCCTACCATACTCTAGGCCAGAGAAAATAAATCCAGAACCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR GCA 90 bp GGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCCTTACTATAAATGTGCTTGTCTaGTTCCTCCACCTCAAACCT +
Preference number: 4 (lower is better)
Translates to: GISNLGLIVSHPVKCSLTINVLV*FLHLKP
Trigger: AGGTTTGAGGTGGAGGAAGCAGACAAGCACATTTAT...AGTAAGGCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp ATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCCTTACTTCCCCCCAACTGTGGTCATaGAGAAAGATTATTGATTGG +
Preference number: 4 (lower is better)
Translates to: ISNLGLIVSHPVKCSLTSPQLWS*RKIIDW
Trigger: CCAATCAATAATCTTTCTCCATGACCACAGTTGGGG...GGAAGTAAGGCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000641461.1
3UTR CAA 72 bp TTCCAAAAGCCATTTCAGCAACAGGACTTCATCTTATaGGAGATGTGGAAAGATGCAGAGAGGAATCTCAAA +
Preference number: 4 (lower is better)
Translates to: FQKPFQQQDFIL*EMWKDAERNLK
Trigger: TTTGAGATTCCTCTCTGCATCTTTCCACATCTCCAATAAGATGAAGTCCTGTTGCTGAAATGGCTTTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR TCA 90 bp AGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCCTTTGCACACCTTTCCTCTaGTTTGATCATCTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: RGISNLGLIVSHPVKCSLCTPFL*FDHLFL
Trigger: AAGAAACAGATGATCAAATCAGAGGAAAGGTGTGCA...AAGGCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR TCA 90 bp ATGCAGAGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAATCCCCAGTGTAGCTaGTTTTTCAGTGACACAAAA +
Preference number: 4 (lower is better)
Translates to: MQRGISNLGLIVSHPVKCNPQCS*FFSDTK
Trigger: TTTTGTGTCACTGAAAAATCAGCTACACTGGGGATT...ACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCTCTGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR TCA 90 bp ATGCAGAGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTCAAGGTCTTTTCCTGTaGTCTCTGCTTATTTTTCCA +
Preference number: 4 (lower is better)
Translates to: MQRGISNLGLIVSHPVKCQGLFL*SLLIFP
Trigger: TGGAAAAATAAGCAGAGATCACAGGAAAAGACCTTG...ACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCTCTGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR GCA 90 bp GATGCAGAGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGATCTACTCTCATACATaGATACTGCATACCAGTAAG +
Preference number: 4 (lower is better)
Translates to: DAERNLKSGTDCFSSSKMIYSHT*ILHTSK
Trigger: CTTACTGGTATGCAGTATGCATGTATGAGAGTAGAT...CATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCTCTGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp CAGAGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCATCTTATTGGAGATGTaGAAAGATGCAGAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: QRGISNLGLIVSHPVKCSILLEM*KDAERN
Trigger: ATTCCTCTCTGCATCTTTCCACATCTCCAATAAGAT...GCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR TCA 90 bp ATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCCTTACTTCCAAAGGCATATGCATGTaGACTTTTGATCTACTCTCA +
Preference number: 4 (lower is better)
Translates to: ISNLGLIVSHPVKCSLTSKGICM*TFDLLS
Trigger: TGAGAGTAGATCAAAAGTTCACATGCATATGCCTTT...GGAAGTAAGGCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR GCA 90 bp GGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCCTTACTAGAAAGAGTGATTTCTaGTTCTTGAGGAATCACAGT +
Preference number: 4 (lower is better)
Translates to: GISNLGLIVSHPVKCSLTRKSDF*FLRNHS
Trigger: ACTGTGATTCCTCAAGAAGCAGAAATCACTCTTTCT...AGTAAGGCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp CAGAGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCGTAGTAGTAAAAGACTaGCTAAATAAATTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: QRGISNLGLIVSHPVKCSVVVKD*LNKLGH
Trigger: GTGCCCTAATTTATTTAGCCAGTCTTTTACTACTAC...GCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp AGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCCTTTCTACATTGTCTCTCTaGGAACCAAATGTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: RGISNLGLIVSHPVKCSLSTLSL*EPNVVS
Trigger: AGAAACAACATTTGGTTCCCAGAGAGACAATGTAGA...AAGGCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp ATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCCTTACTTCCTCTTCAAACCATCCTTaGTTTGTATGTGATCTGTCT +
Preference number: 4 (lower is better)
Translates to: ISNLGLIVSHPVKCSLTSSSNHP*FVCDLS
Trigger: AGACAGATCACATACAAACCAAGGATGGTTTGAAGA...GGAAGTAAGGCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CCA 90 bp GATGCAGAGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGGTAACATTGGAGAACTaGAATACCACTTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: DAERNLKSGTDCFSSSKMVTLEN*NTTFIV
Trigger: AACTATGAAAGTGGTATTCCAGTTCTCCAATGTTAC...CATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCTCTGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CAA 90 bp AGCAAGTGTTGGAATCCTGGGTGGCTGAGTCCAAGTCAGGGATTTGGCCGACAAAGGCAGAAGGATTGCTaGAACTCAGAAGTTCGATAC +
Preference number: 5 (lower is better)
Translates to: SKCWNPGWLSPSQGFGRQRQKDC*NSEVRY
Trigger: GTATCGAACTTCTGAGTTCAAGCAATCCTTCTGCCT...TTGTCGGCCAAATCCCTGACTTGGACTCAGCCACCCAGGATTCCAACACTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CAA 90 bp ACCTTCTCCAGCTCTACCACCACTGCCTTTAGGTTCTGGATTTATTTTCTCTGGCTGGTTTTGGGAGAGTaGTTCCCACCTGTGCCTCTT +
Preference number: 5 (lower is better)
Translates to: TFSSSTTTAFRFWIYFLWLVLGE*FPPVPL
Trigger: AAGAGGCACAGGTGGGAACAACTCTCCCAAAACCAG...CCAGAGAAAATAAATCCAGAACCTAAAGGCAGTGGTGGTAGAGCTGGAGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CAA 90 bp CTTTGTGTTCCTTACACACATCATAGTCTCTCAGCACTCCTGTGTTTGTGCATGCTCCCAGTCCTGGTTTaGGGAGAGTTGTTCCCACCT +
Preference number: 5 (lower is better)
Translates to: LCVPYTHHSLSALLCLCMLPVLV*GELFPP
Trigger: AGGTGGGAACAACTCTCCCAAAACCAGGACTGGGAG...CATGCACAAACACAGGAGTGCTGAGAGACTATGATGTGTGTAAGGAACACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CAA 90 bp TCTCTCAGCACTCCTGTGTTTGTGCATGTGGCACTCTTCTGTTGGAATCCTTTCTATAATCCCAGCACTTaGAGAGGTTCAGGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: SLSTPVFVHVALFCWNPFYNPST*RGSGRR
Trigger: CCTTCTGCCTGAACCTCTCAAAGTGCTGGGATTATA...GAAAGGATTCCAACAGAAGAGTGCCACATGCACAAACACAGGAGTGCTGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CAA 90 bp AAGTGTTGGAATCCTGGGTGGCTGAGTCCAAGTCAGGGATTTGGCCGACAAGTGTCTGGGAACCAAATGTaGTTTCTACTAATGCCTTGT +
Preference number: 5 (lower is better)
Translates to: KCWNPGWLSPSQGFGRQVSGNQM*FLLMPC
Trigger: ACAAGGCATTAGTAGAAACAACATTTGGTTCCCAGA...CACTTGTCGGCCAAATCCCTGACTTGGACTCAGCCACCCAGGATTCCAACACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CAA 90 bp CTTTGTGTTCCTTACACACATCATAGTCTCTCAGCACTCCTGTGTTTGTGCATGCCTGGGCAGTCTACATaGTCTCTCTGGGAACCAAAT +
Preference number: 5 (lower is better)
Translates to: LCVPYTHHSLSALLCLCMPGQST*SLWEPN
Trigger: ATTTGGTTCCCAGAGAGACAATGTAGACTGCCCAGG...CATGCACAAACACAGGAGTGCTGAGAGACTATGATGTGTGTAAGGAACACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CAA 90 bp ACCTTCTCCAGCTCTACCACCACTGCCTTTAGGTTCTGGATTTATTTTCTCTGGAGAGAAACACTTGTGTaGCATGCAATGGCTCACACT +
Preference number: 5 (lower is better)
Translates to: TFSSSTTTAFRFWIYFLWRETLV*HAMAHT
Trigger: AGTGTGAGCCATTGCATGCAACACAAGTGTTTCTCT...CCAGAGAAAATAAATCCAGAACCTAAAGGCAGTGGTGGTAGAGCTGGAGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CAA 90 bp TCTCTCAGCACTCCTGTGTTTGTGCATGTGGCACTCTTCTGTTGGAATCCTTTCAATGATAGCAGCTTCTaGCCCTCAGGTGAATTATTT +
Preference number: 5 (lower is better)
Translates to: SLSTPVFVHVALFCWNPFNDSSF*PSGELF
Trigger: AAATAATTCACCTGAGGGCAAGAAGCTGCTATCATT...GAAAGGATTCCAACAGAAGAGTGCCACATGCACAAACACAGGAGTGCTGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CAA 90 bp GGTTCTGGATTTATTTTCTCTGGCCTAGAGTATGGTAGGAACCTGCTTCTGGTTTTAGGGAAGCTCAGGTaGTTTTTCTTGGGAAGAATC +
Preference number: 5 (lower is better)
Translates to: GSGFIFSGLEYGRNLLLVLGKLR*FFLGRI
Trigger: GATTCTTCCCAAGAAAAACAACCTGAGCTTCCCTAA...AACCAGAAGCAGGTTCCTACCATACTCTAGGCCAGAGAAAATAAATCCAGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CAA 90 bp CTTTGTGTTCCTTACACACATCATAGTCTCTCAGCACTCCTGTGTTTGTGCATGGAGGAGAGTTATGTGTaGGGAAAGATCATGAGATTT +
Preference number: 5 (lower is better)
Translates to: LCVPYTHHSLSALLCLCMEESYV*GKIMRF
Trigger: AAATCTCATGATCTTTCCCAACACATAACTCTCCTC...CATGCACAAACACAGGAGTGCTGAGAGACTATGATGTGTGTAAGGAACACAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CAA 90 bp TTTACCCATACTAAGGACTACCCCCTACCCCAGTACAAATTGTCTCAGCATCAACAAACCATCCTTGGTTaGTATGTGATCTGTCTTATC +
Preference number: 5 (lower is better)
Translates to: FTHTKDYPLPQYKLSQHQQTILG*YVICLI
Trigger: GATAAGACAGATCACATACAAACCAAGGATGGTTTG...TTGATGCTGAGACAATTTGTACTGGGGTAGGGGGTAGTCCTTAGTATGGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CAA 90 bp CAGAGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCCAGGACTTCATCTTATaGGAGATGTGGAAAGATGCA +
Preference number: 5 (lower is better)
Translates to: QRGISNLGLIVSHPVKCSQDFIL*EMWKDA
Trigger: TGCATCTTTCCACATCTCCAATAAGATGAAGTCCTG...GCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CAA 90 bp GGTTCTGGATTTATTTTCTCTGGCCTAGAGTATGGTAGGAACCTGCTTCTGGTTAGAGTTACAGAAAAGTaGGAGGAAGACAAACATGTA +
Preference number: 5 (lower is better)
Translates to: GSGFIFSGLEYGRNLLLVRVTEK*EEDKHV
Trigger: TACATGTTTGTCTTCCTCCAACTTTTCTGTAACTCT...AACCAGAAGCAGGTTCCTACCATACTCTAGGCCAGAGAAAATAAATCCAGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CAA 90 bp AGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCCTTCTACCCCAGTACAAATaGTCTCAGCATCAAGCATCA +
Preference number: 5 (lower is better)
Translates to: RGISNLGLIVSHPVKCSLLPQYK*SQHQAS
Trigger: TGATGCTTGATGCTGAGACAATTTGTACTGGGGTAG...AAGGCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CAA 90 bp GGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCCTTACTACTAGCAGTTTCATATaGTGCACAATGCACGTCACA +
Preference number: 5 (lower is better)
Translates to: GISNLGLIVSHPVKCSLTTSSFI*CTMHVT
Trigger: TGTGACGTGCATTGTGCACAATATGAAACTGCTAGT...AGTAAGGCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CAA 90 bp ATGCAGAGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGAAAAGAGAAACACTaGTGTTGCATGCAATGGCTC +
Preference number: 5 (lower is better)
Translates to: MQRGISNLGLIVSHPVKCRKEKH*CCMQWL
Trigger: GAGCCATTGCATGCAACACAAGTGTTTCTCTTTTCT...ACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCTCTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CAA 90 bp AGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTAGCCTTACTTATTCTGGAGCTTaGTTCTCATCAAAGCAAAGC +
Preference number: 5 (lower is better)
Translates to: RGISNLGLIVSHPVKCSLTYSGA*FSSKQS
Trigger: GCTTTGCTTTGATGAGAACAAAGCTCCAGAATAAGT...AAGGCTACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1
CDS-3UTR CAA 90 bp ATGCAGAGAGGAATCTCAAATCTGGGACTGATTGTTTCTCATCCAGTAAAATGTTATGCATGTGAACTTTaGATCTACTCTCATACATGC +
Preference number: 5 (lower is better)
Translates to: MQRGISNLGLIVSHPVKCYACEL*IYSHTC
Trigger: GCATGTATGAGAGTAGATCAAAAGTTCACATGCATA...ACATTTTACTGGATGAGAAACAATCAGTCCCAGATTTGAGATTCCTCTCTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641461.1