RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OPTN (Homo sapiens)

Ensembl gene IDs: ENSG00000123240

Ensembl transcript IDs: ENST00000263036.9, ENST00000378747.8, ENST00000378748.7, ENST00000378752.7, ENST00000378757.6, ENST00000378764.6, ENST00000424614.1, ENST00000430081.5, ENST00000469025.1, ENST00000482140.5, ENST00000486862.1, ENST00000487935.1

Found 543 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTGCTTGTAGCCTCACCACCTGGGTCCTGAGCTGGTCCTTTTCCTaGTCCGCTTCGGCCCTGGGAAGCCTGGAGTCATCAGTGGGGTCC +
Preference number: 1 (lower is better)
Translates to: SACSLTTWVLSWSFS*SASALGSLESSVGS
Trigger: GGACCCCACTGATGACTCCAGGCTTCCCAGGGCCGAAGCGGAGCAGGAAAAGGACCAGCTCAGGACCCAGGTGGTGAGGCTACAAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430081.5
3UTR CCA 90 bp AGGTCTGCCTTCTCTGCTTGTAGCCTCACCACCTGGGTCCTGAGCTaGTCCTTTTCCTGCTCCGCTTCGGCCCTGGGAAGCCTGGAGTCA +
Preference number: 1 (lower is better)
Translates to: RSAFSACSLTTWVLS*SFSCSASALGSLES
Trigger: TGACTCCAGGCTTCCCAGGGCCGAAGCGGAGCAGGAAAAGGACCAGCTCAGGACCCAGGTGGTGAGGCTACAAGCAGAGAAGGCAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
3UTR CCA 90 bp ACGATGCCCAACAGGTCTGCCTTCTCTGCTTGTAGCCTCACCACCTaGGTCCTGAGCTGGTCCTTTTCCTGCTCCGCTTCGGCCCTGGGA +
Preference number: 1 (lower is better)
Translates to: TMPNRSAFSACSLTT*VLSWSFSCSASALG
Trigger: TCCCAGGGCCGAAGCGGAGCAGGAAAAGGACCAGCTCAGGACCCAGGTGGTGAGGCTACAAGCAGAGAAGGCAGACCTGTTGGGCATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
3UTR GCA 90 bp CTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTaGCTCAACCTCGCGAGTAGCTGCGACTACAGGCATGCGCCACCA +
Preference number: 1 (lower is better)
Translates to: LGSLQLPLPGFKQFS*LNLASSCDYRHAPP
Trigger: TGGTGGCGCATGCCTGTAGTCGCAGCTACTCGCGAGGTTGAGGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR GCA 90 bp GACAATGCCGTGCCAGTGGAGACTGTTCTCGTGGGCCCAGGACTATaGTTGATTTCTTTTACTGACCCTTCTGCTTCTCCTTCAGCCATC +
Preference number: 1 (lower is better)
Translates to: DNAVPVETVLVGPGL*LISFTDPSASPSAI
Trigger: GATGGCTGAAGGAGAAGCAGAAGGGTCAGTAAAAGAAATCAAGCATAGTCCTGGGCCCACGAGAACAGTCTCCACTGGCACGGCATTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482140.5
3UTR CCA 90 bp TCTGTTTCTCTGTCCAGGCCGAAAGCTCCTCAAATCTCCCTTTCATaGCTTGATTATTTAGCTTCATGGCTTCTGCAGGAGGTTCAGAGT +
Preference number: 1 (lower is better)
Translates to: SVSLSRPKAPQISLS*LDYLASWLLQEVQS
Trigger: ACTCTGAACCTCCTGCAGAAGCCATGAAGCTAAATAATCAAGCCATGAAAGGGAGATTTGAGGAGCTTTCGGCCTGGACAGAGAAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
3UTR CCA 90 bp AAAGCTCCTCAAATCTCCCTTTCATGGCTTGATTATTTAGCTTCATaGCTTCTGCAGGAGGTTCAGAGTGATGGAGTCACACACCAGGAA +
Preference number: 1 (lower is better)
Translates to: KAPQISLSWLDYLAS*LLQEVQSDGVTHQE
Trigger: TTCCTGGTGTGTGACTCCATCACTCTGAACCTCCTGCAGAAGCCATGAAGCTAAATAATCAAGCCATGAAAGGGAGATTTGAGGAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
3UTR CCA 90 bp TTCACCTTCTCAGCAAGAATGACTTCTAACTCACACAGCACATACTaGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTAATGAA +
Preference number: 1 (lower is better)
Translates to: FTFSARMTSNSHSTY*APVKGSAHIHRTNE
Trigger: TTCATTAGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGAGTTAGAAGTCATTCTTGCTGAGAAGGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR CCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTaGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTC +
Preference number: 1 (lower is better)
Translates to: KHTVYFYSWSSVIYS*QIVDLQNKANPYLF
Trigger: GAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR TCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCGCTGGTCTCAAACCCTaGCCCCAAGTGATCCACCCA +
Preference number: 2 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAAGLKP*PQVIHP
Trigger: TGGGTGGATCACTTGGGGTCAGGGTTTGAGACCAGC...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR CCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCAGGGTTCCGCCATGTTaGCCAGGCTGGTCTCAAACC +
Preference number: 2 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPARVPPC*PGWSQT
Trigger: GGTTTGAGACCAGCCTGGCCAACATGGCGGAACCCT...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACATCACCCAGGCTGGAGTaGAGTGGTGTCGTCTCGGCT +
Preference number: 2 (lower is better)
Translates to: CHMLANCMSSAAARINQTSPRLE*SGVVSA
Trigger: AGCCGAGACGACACCACTGCACTCCAGCCTGGGTGA...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR CCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACACCATGTTGGCCAGGCTaGTCTCAAACCCTGACCCCA +
Preference number: 2 (lower is better)
Translates to: CHMLANCMSSAAARINQTPCWPG*SQTLTP
Trigger: TGGGGTCAGGGTTTGAGACCAGCCTGGCCAACATGG...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACATCGGCTCACTGCAACTaGCACTTCCTGGGTTCAAGC +
Preference number: 2 (lower is better)
Translates to: CHMLANCMSSAAARINQTSAHCN*HFLGSS
Trigger: GCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGA...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTTCACCCAGGCTGGAGTaGAGTGGTGTCGTCTCGGCT +
Preference number: 2 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTSPRLE*SGVVSA
Trigger: AGCCGAGACGACACCACTGCACTCCAGCCTGGGTGA...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR CCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTCAGGCTGGAGTGCAGTaGTGTCGTCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTQAGVQ*CRLGSL
Trigger: CAGTGAGCCGAGACGACACCACTGCACTCCAGCCTG...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR CAA 90 bp AATGCCGTGCCAGTGGAGACTGTTCTCGTGGGCCCAGGACTATGCTaGATTTCTTTTACTGACCCTTCTGCTTCTCCTTCAGCCATCCTA +
Preference number: 2 (lower is better)
Translates to: NAVPVETVLVGPGLC*ISFTDPSASPSAIL
Trigger: TAGGATGGCTGAAGGAGAAGCAGAAGGGTCAGTAAAAGAAATCAAGCATAGTCCTGGGCCCACGAGAACAGTCTCCACTGGCACGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482140.5
3UTR-3UTR TCA 90 bp GCTGCAGTTCAGACACGATGCCCAACAGGTCTGCCTTCTCTGCTTGTAGCCTCACCAGGAAAGTGGACTTaGTCTGATGAACCAAATCTC +
Preference number: 2 (lower is better)
Translates to: AAVQTRCPTGLPSLLVASPGKWT*SDEPNL
Trigger: GAGATTTGGTTCATCAGATCAAGTCCACTTTCCTGG...TGAGGCTACAAGCAGAGAAGGCAGACCTGTTGGGCATCGTGTCTGAACTGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
3UTR CAA 90 bp CTAATTTCAACAAAGGAATCTTCTGAGGAGCCGCTGGAGTTCAGCTaGAGCTGCAGTTCAGACACGATGCCCAACAGGTCTGCCTTCTCT +
Preference number: 2 (lower is better)
Translates to: LISTKESSEEPLEFS*SCSSDTMPNRSAFS
Trigger: AGAGAAGGCAGACCTGTTGGGCATCGTGTCTGAACTGCAGCTCAAGCTGAACTCCAGCGGCTCCTCAGAAGATTCCTTTGTTGAAATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
3UTR-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCAACCTCGCGAGTAGCTaGGACTACAGGCATGCGCCA +
Preference number: 2 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLNLASS*DYRHAP
Trigger: TGGCGCATGCCTGTAGTCGCAGCTACTCGCGAGGTT...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR CCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCATTTACCAACAGTTTTaGGGAGGTGATACATCAACA +
Preference number: 2 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAIYQQF*GGDTST
Trigger: TGTTGATGTATCACCTCCCCAAAACTGTTGGTAAAT...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR CCA 90 bp GCCTTCTCTGCTTGTAGCCTCACCACCTGGGTCCTGAGCTGGTCCTTTTCCTGCCAAATCTCCCTTTCATaGCTTGATTATTTAGCTTCA +
Preference number: 2 (lower is better)
Translates to: AFSACSLTTWVLSWSFSCQISLS*LDYLAS
Trigger: TGAAGCTAAATAATCAAGCCATGAAAGGGAGATTTG...GCAGGAAAAGGACCAGCTCAGGACCCAGGTGGTGAGGCTACAAGCAGAGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430081.5
3UTR-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTCACATGCTAGCTAACTaGATGAGCAGTGCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTHMLAN*MSSAAA
Trigger: AGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTG...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTACAAGCCCACAGGCCTaGAGGTACAATGAAAGCATG +
Preference number: 2 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTTSPQA*RYNESM
Trigger: CATGCTTTCATTGTACCTGCAGGCCTGTGGGCTTGT...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACTCACCCAGGCTGGAGTaGAGTGGTGTCGTCTCGGCT +
Preference number: 2 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHSPRLE*SGVVSA
Trigger: AGCCGAGACGACACCACTGCACTCCAGCCTGGGTGA...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAGTAAGGATTCTACTTTaGGAGTTGATGGAACTCCAC +
Preference number: 2 (lower is better)
Translates to: CHMLANCMSSAAARINQTVRILL*ELMELH
Trigger: GTGGAGTTCCATCAACTCGCAAAGTAGAATCCTTAC...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTCATGAGCAGTGCAGCTaGTCGCATCAACCAAACATA +
Preference number: 2 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTHEQCS*SHQPNI
Trigger: TATGTTTGGTTGATGCGAGCAGCTGCACTGCTCATG...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR CCA 90 bp AACTGGCGTTCTTCCTTCTGTTTCTCTGTCCAGGCCGAAAGCTCCTCAAATCTCGATTATTTAGCTTCATaGCTTCTGCAGGAGGTTCAG +
Preference number: 2 (lower is better)
Translates to: NWRSSFCFSVQAESSSNLDYLAS*LLQEVQ
Trigger: CTGAACCTCCTGCAGAAGCCATGAAGCTAAATAATC...GAGATTTGAGGAGCTTTCGGCCTGGACAGAGAAACAGAAGGAAGAACGCCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
3UTR-3UTR TCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACGCTGGTCTCAAACCCTaGCCCCAAGTGATCCACCCA +
Preference number: 2 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHAGLKP*PQVIHP
Trigger: TGGGTGGATCACTTGGGGTCAGGGTTTGAGACCAGC...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTAGGCATGCGCCACCATaGTCGGCTAATTTTTGTAAT +
Preference number: 2 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTRHAPP*SANFCN
Trigger: ATTACAAAAATTAGCCGAGCATGGTGGCGCATGCCT...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR CCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTAAACAGCACATACTGTaGCCACTTCATTGTTCCTGC +
Preference number: 2 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTKQHIL*PLHCSC
Trigger: GCAGGAACAATGAAGTGGCCACAGTATGTGCTGTTT...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR TCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCGCTGGTCTCAAACCCTaGCCCCAAGTGATCCACCCA +
Preference number: 2 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIAGLKP*PQVIHP
Trigger: TGGGTGGATCACTTGGGGTCAGGGTTTGAGACCAGC...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR TCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTGCTGGTCTCAAACCCTaGCCCCAAGTGATCCACCCA +
Preference number: 2 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIAGLKP*PQVIHP
Trigger: TGGGTGGATCACTTGGGGTCAGGGTTTGAGACCAGC...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCAACCTCGCGAGTAGCTaGGACTACAGGCATGCGCCA +
Preference number: 2 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQINLASS*DYRHAP
Trigger: TGGCGCATGCCTGTAGTCGCAGCTACTCGCGAGGTT...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACTCGGCTCACTGCAACTaGCACTTCCTGGGTTCAAGC +
Preference number: 2 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHSAHCN*HFLGSS
Trigger: GCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGA...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR CCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAATTTACCAACAGTTTTaGGGAGGTGATACATCAACA +
Preference number: 2 (lower is better)
Translates to: CHMLANCMSSAAARINQTIYQQF*GGDTST
Trigger: TGTTGATGTATCACCTCCCCAAAACTGTTGGTAAAT...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR CCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCCCATGTTGGCCAGGCTaGTCTCAAACCCTGACCCCA +
Preference number: 2 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIPCWPG*SQTLTP
Trigger: TGGGGTCAGGGTTTGAGACCAGCCTGGCCAACATGG...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR CCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTAGGGTTCCGCCATGTTaGCCAGGCTGGTCTCAAACC +
Preference number: 2 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIRVPPC*PGWSQT
Trigger: GGTTTGAGACCAGCCTGGCCAACATGGCGGAACCCT...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR CCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCAGGGTTCCGCCATGTTaGCCAGGCTGGTCTCAAACC +
Preference number: 2 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIRVPPC*PGWSQT
Trigger: GGTTTGAGACCAGCCTGGCCAACATGGCGGAACCCT...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTTCGGCTCACTGCAACTaGCACTTCCTGGGTTCAAGC +
Preference number: 2 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQISAHCN*HFLGSS
Trigger: GCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGA...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACACAAGCCCACAGGCCTaGAGGTACAATGAAAGCATG +
Preference number: 2 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHTSPQA*RYNESM
Trigger: CATGCTTTCATTGTACCTGCAGGCCTGTGGGCTTGT...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR CCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTATTTACCAACAGTTTTaGGGAGGTGATACATCAACA +
Preference number: 2 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTIYQQF*GGDTST
Trigger: TGTTGATGTATCACCTCCCCAAAACTGTTGGTAAAT...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR CCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACGCAACTGCCACTTCCTaGGTTCAAGCAATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHATATS*VQAILL
Trigger: CAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGC...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACCATGAGCAGTGCAGCTaGTCGCATCAACCAAACATA +
Preference number: 2 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHHEQCS*SHQPNI
Trigger: TATGTTTGGTTGATGCGAGCAGCTGCACTGCTCATG...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCCACATGCTAGCTAACTaGATGAGCAGTGCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIHMLAN*MSSAAA
Trigger: AGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTG...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTCACATGCTAGCTAACTaGATGAGCAGTGCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIHMLAN*MSSAAA
Trigger: AGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTG...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTACAAGCCCACAGGCCTaGAGGTACAATGAAAGCATG +
Preference number: 2 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQITSPQA*RYNESM
Trigger: CATGCTTTCATTGTACCTGCAGGCCTGTGGGCTTGT...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp TACTTTATTCAAACCAGTAATGGGATAGAACCCAAATCTTTCAATTCTCCCTCAGATAGAAATACATCTTaGAGCTGGGCGCAGTGGCTC +
Preference number: 2 (lower is better)
Translates to: YFIQTSNGIEPKSFNSPSDRNTS*SWAQWL
Trigger: GAGCCACTGCGCCCAGCTGCAAGATGTATTTCTATC...TGAGGGAGAATTGAAAGATTTGGGTTCTATCCCATTACTGGTTTGAATAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424614.1
3UTR-3UTR CCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTGCAACTGCCACTTCCTaGGTTCAAGCAATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIATATS*VQAILL
Trigger: CAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGC...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACAGGCATGCGCCACCATaGTCGGCTAATTTTTGTAAT +
Preference number: 2 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHRHAPP*SANFCN
Trigger: ATTACAAAAATTAGCCGAGCATGGTGGCGCATGCCT...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCCATGAGCAGTGCAGCTaGTCGCATCAACCAAACATA +
Preference number: 2 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIHEQCS*SHQPNI
Trigger: TATGTTTGGTTGATGCGAGCAGCTGCACTGCTCATG...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR CCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACAAACAGCACATACTGTaGCCACTTCATTGTTCCTGC +
Preference number: 2 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHKQHIL*PLHCSC
Trigger: GCAGGAACAATGAAGTGGCCACAGTATGTGCTGTTT...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR CCA 90 bp AACCCAAATCTTTCAATTCTCCCTCAAGTTTCTAAGTCATATCCTCAAATGATCAATACATCTTGCAGCTaGGCGCAGTGGCTCATATCT +
Preference number: 2 (lower is better)
Translates to: NPNLSILPQVSKSYPQMINTSCS*AQWLIS
Trigger: AGATATGAGCCACTGCGCCCAGCTGCAAGATGTATT...GATCATTTGAGGATATGACTTAGAAACTTGAGGGAGAATTGAAAGATTTGGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424614.1
3UTR-3UTR TCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCTTCTACTTTGCGAGTTaGTGGAACTCCACCAAAGGT +
Preference number: 2 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIFYFAS*WNSTKG
Trigger: ACCTTTGGTGGAGTTCCATCAACTCGCAAAGTAGAA...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTAGGCATGCGCCACCATaGTCGGCTAATTTTTGTAAT +
Preference number: 2 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIRHAPP*SANFCN
Trigger: ATTACAAAAATTAGCCGAGCATGGTGGCGCATGCCT...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR CCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCAAACAGCACATACTGTaGCCACTTCATTGTTCCTGC +
Preference number: 2 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIKQHIL*PLHCSC
Trigger: GCAGGAACAATGAAGTGGCCACAGTATGTGCTGTTT...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTGTAAGGATTCTACTTTaGGAGTTGATGGAACTCCAC +
Preference number: 2 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIVRILL*ELMELH
Trigger: GTGGAGTTCCATCAACTCGCAAAGTAGAATCCTTAC...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACCCACTTCATTGTTCCTaGATCCCTAAAAGGTTCTTA +
Preference number: 2 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHPLHCS*IPKRFL
Trigger: TAAGAACCTTTTAGGGATGCAGGAACAATGAAGTGG...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR TCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTGGTAAAGAAATCCAATaGGGCCAATGTTATCGGTTT +
Preference number: 2 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIGKEIQ*GQCYRF
Trigger: AAACCGATAACATTGGCCTCATTGGATTTCTTTACC...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCCCACTTCATTGTTCCTaGATCCCTAAAAGGTTCTTA +
Preference number: 2 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIPLHCS*IPKRFL
Trigger: TAAGAACCTTTTAGGGATGCAGGAACAATGAAGTGG...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR GCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTCCACTTCATTGTTCCTaGATCCCTAAAAGGTTCTTA +
Preference number: 2 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIPLHCS*IPKRFL
Trigger: TAAGAACCTTTTAGGGATGCAGGAACAATGAAGTGG...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR CAA 90 bp AATATTAAAATTATTATCAGAAGAGTAGTAGGTAAGGATTCTACTTaGCGAGTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAG +
Preference number: 2 (lower is better)
Translates to: NIKIIIRRVVGKDST*RVDGTPPKVFYVEQ
Trigger: CTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAACTCGCAAAGTAGAATCCTTACCTACTACTCTTCTGATAATAATTTTAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR CCA 72 bp TTCTCTGCTTGTAGCCTCACCACCTGGGTCCTGAGCTaGTCCTTTTCCTGCTCCGCTTCGGCCCTGGGAAGC +
Preference number: 3 (lower is better)
Translates to: FSACSLTTWVLS*SFSCSASALGS
Trigger: GCTTCCCAGGGCCGAAGCGGAGCAGGAAAAGGACCAGCTCAGGACCCAGGTGGTGAGGCTACAAGCAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
3UTR GCA 72 bp GTGCCAGTGGAGACTGTTCTCGTGGGCCCAGGACTATaGTTGATTTCTTTTACTGACCCTTCTGCTTCTCCT +
Preference number: 3 (lower is better)
Translates to: VPVETVLVGPGL*LISFTDPSASP
Trigger: AGGAGAAGCAGAAGGGTCAGTAAAAGAAATCAAGCATAGTCCTGGGCCCACGAGAACAGTCTCCACTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482140.5
3UTR TCA 72 bp CAGTGGAGACTGTTCTCGTGGGCCCAGGACTATGCTTaGTTTCTTTTACTGACCCTTCTGCTTCTCCTTCAG +
Preference number: 3 (lower is better)
Translates to: QWRLFSWAQDYA*FLLLTLLLLLQ
Trigger: CTGAAGGAGAAGCAGAAGGGTCAGTAAAAGAAATCAAGCATAGTCCTGGGCCCACGAGAACAGTCTCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482140.5
3UTR TCA 72 bp TCCTTCAGCCATCCTAATTTCAACAAAGGAATCTTCTaGGGAGCCGCTGGAGTTCAGCTTGAGCTGCAGTTC +
Preference number: 3 (lower is better)
Translates to: SFSHPNFNKGIF*GAAGVQLELQF
Trigger: GAACTGCAGCTCAAGCTGAACTCCAGCGGCTCCTCAGAAGATTCCTTTGTTGAAATTAGGATGGCTGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
3UTR CCA 72 bp CTGTCCAGGCCGAAAGCTCCTCAAATCTCCCTTTCATaGCTTGATTATTTAGCTTCATGGCTTCTGCAGGAG +
Preference number: 3 (lower is better)
Translates to: LSRPKAPQISLS*LDYLASWLLQE
Trigger: CTCCTGCAGAAGCCATGAAGCTAAATAATCAAGCCATGAAAGGGAGATTTGAGGAGCTTTCGGCCTGGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
3UTR TCA 72 bp CAGGCCGAAAGCTCCTCAAATCTCCCTTTCATGGCTTaGTTATTTAGCTTCATGGCTTCTGCAGGAGGTTCA +
Preference number: 3 (lower is better)
Translates to: QAESSSNLPFMA*LFSFMASAGGS
Trigger: TGAACCTCCTGCAGAAGCCATGAAGCTAAATAATCAAGCCATGAAAGGGAGATTTGAGGAGCTTTCGGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
3UTR CCA 72 bp TCAGCAAGAATGACTTCTAACTCACACAGCACATACTaGGCTCCAGTAAAGGGATCTGCTCATATCCATAGA +
Preference number: 3 (lower is better)
Translates to: SARMTSNSHSTY*APVKGSAHIHR
Trigger: TCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGAGTTAGAAGTCATTCTTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR CCA 72 bp CAAATCTCCCTTTCATGGCTTGATTATTTAGCTTCATaGCTTCTGCAGGAGGTTCAGAGTGATGGAGTCACA +
Preference number: 3 (lower is better)
Translates to: QISLSWLDYLAS*LLQEVQSDGVT
Trigger: TGTGACTCCATCACTCTGAACCTCCTGCAGAAGCCATGAAGCTAAATAATCAAGCCATGAAAGGGAGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
3UTR TCA 72 bp GGACAACATTCCTTTTCCTACAGTAGGCTTGTTCATTaGAGGACCGAGGAGAAGAAATCAGTCAAGAAGAGA +
Preference number: 3 (lower is better)
Translates to: GQHSFSYSRLVH*RTEEKKSVKKR
Trigger: TCTCTTCTTGACTGATTTCTTCTCCTCGGTCCTTCAATGAACAAGCCTACTGTAGGAAAAGGAATGTTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424614.1
3UTR-3UTR CAA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACGGTAAGGATTCTACTTaGCGAGTTGATGGAACTCCA +
Preference number: 3 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHGKDST*RVDGTP
Trigger: TGGAGTTCCATCAACTCGCAAAGTAGAATCCTTACC...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR CAA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCGGTAAGGATTCTACTTaGCGAGTTGATGGAACTCCA +
Preference number: 3 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIGKDST*RVDGTP
Trigger: TGGAGTTCCATCAACTCGCAAAGTAGAATCCTTACC...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR-3UTR CAA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTGGTAAGGATTCTACTTaGCGAGTTGATGGAACTCCA +
Preference number: 3 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIGKDST*RVDGTP
Trigger: TGGAGTTCCATCAACTCGCAAAGTAGAATCCTTACC...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp GCTCCTATATTTAGACAATGCCGTGCCAGTGGAGACTGTTCTCGTGGGCCCAGGACCGGGATGGGACGCTaGCCAGGGAACCTGCCGGCG +
Preference number: 4 (lower is better)
Translates to: APIFRQCRASGDCSRGPRTGMGR*PGNLPA
Trigger: CGCCGGCAGGTTCCCTGGTCAGCGTCCCATCCCGGT...CCTGGGCCCACGAGAACAGTCTCCACTGGCACGGCATTGTCTAAATATAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS-3UTR CCA 90 bp GGTCCTGAGCTGGTCCTTTTCCTGCTCCGCTTCGGCCCTGGGAAGCCTGGAGTCACCTGGGTCCTGAGCTaGTCCTTTTCCTGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: GPELVLFLLRFGPGKPGVTWVLS*SFSCSA
Trigger: AGCGGAGCAGGAAAAGGACCAGCTCAGGACCCAGGT...GACTCCAGGCTTCCCAGGGCCGAAGCGGAGCAGGAAAAGGACCAGCTCAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS-3UTR CCA 90 bp TGCAGTTCAGACACGATGCCCAACAGGTCTGCCTTCTCTGCTTGTAGCCTCACCCGGCATCGTGCCGCCTaGAGAGAACTCCCGACCGGG +
Preference number: 4 (lower is better)
Translates to: CSSDTMPNRSAFSACSLTRHRAA*RELPTG
Trigger: CCCGGTCGGGAGTTCTCTCCAGGCGGCACGATGCCG...GGTGAGGCTACAAGCAGAGAAGGCAGACCTGTTGGGCATCGTGTCTGAACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS-3UTR CCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCACCTGCCGCCCGGCTTaGCTTCGCTCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPATCRPA*LRSGSL
Trigger: CAGTGACCCTGAGCGAAGCCAAGCCGGGCGGCAGGT...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS-3UTR CCA 90 bp GGTCCTGAGCTGGTCCTTTTCCTGCTCCGCTTCGGCCCTGGGAAGCCTGGAGTCGCCTGGAGTCATCAGTaGGGTCCTCAGATGACCTTT +
Preference number: 4 (lower is better)
Translates to: GPELVLFLLRFGPGKPGVAWSHQ*GPQMTF
Trigger: AAAGGTCATCTGAGGACCCCACTGATGACTCCAGGC...GACTCCAGGCTTCCCAGGGCCGAAGCGGAGCAGGAAAAGGACCAGCTCAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR CCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCGCTCCGCTTCGGCCCTaGGAAGCCTGGAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAAPLRP*EAWSHQ
Trigger: CTGATGACTCCAGGCTTCCCAGGGCCGAAGCGGAGC...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCAACTCCCGACCGGGATaGGACGCTGACCAGGGAACC +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPANSRPG*DADQGT
Trigger: GGTTCCCTGGTCAGCGTCCCATCCCGGTCGGGAGTT...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GCTCCTATATTTAGACAATGCCGTGCCAGTGGAGACTGTTCTCGTGGGCCCAGGTCCTGCCGCCCGGCTTaGCTTCGCTCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: APIFRQCRASGDCSRGPRSCRPA*LRSGSL
Trigger: CAGTGACCCTGAGCGAAGCCAAGCCGGGCGGCAGGA...CCTGGGCCCACGAGAACAGTCTCCACTGGCACGGCATTGTCTAAATATAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS-3UTR TCA 90 bp GGTCCTGAGCTGGTCCTTTTCCTGCTCCGCTTCGGCCCTGGGAAGCCTGGAGTCAGGCAGCTGAGAGGTTaGTGGGACATTGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: GPELVLFLLRFGPGKPGVRQLRG*WDIAEV
Trigger: AACTTCTGCAATGTCCCATCAACCTCTCAGCTGCCT...GACTCCAGGCTTCCCAGGGCCGAAGCGGAGCAGGAAAAGGACCAGCTCAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS-3UTR TCA 90 bp GCCTTCTCTGCTTGTAGCCTCACCACCTGGGTCCTGAGCTGGTCCTTTTCCTGCTCACCACCTGGGTCCTaGGCTGGTCCTTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: AFSACSLTTWVLSWSFSCSPPGS*AGPFPA
Trigger: AGCAGGAAAAGGACCAGCTCAGGACCCAGGTGGTGA...GCAGGAAAAGGACCAGCTCAGGACCCAGGTGGTGAGGCTACAAGCAGAGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS-3UTR GCA 90 bp GCCTTCTCTGCTTGTAGCCTCACCACCTGGGTCCTGAGCTGGTCCTTTTCCTGCAGGAGCTCTTTCATCTaGTGCAGCAGCTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: AFSACSLTTWVLSWSFSCRSSFI*CSSSSG
Trigger: CCCGGAGGAGCTGCTGCAGCAGATGAAAGAGCTCCT...GCAGGAAAAGGACCAGCTCAGGACCCAGGTGGTGAGGCTACAAGCAGAGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS-3UTR GCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCAGCTGGTCCTTTTCCTaGTCCGCTTCGGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPASWSFS*SASALG
Trigger: TCCCAGGGCCGAAGCGGAGCAGGAAAAGGACCAGCT...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCTATCAAAGCCACACCTaGCGCCCGGCTTGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAYQSHT*RPAWLR
Trigger: GCGAAGCCAAGCCGGGCGGCAGGTGTGGCTTTGATA...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS-3UTR GCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCTCACCCAGGCTGGAGTaGAGTGGTGTCGTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPASPRLE*SGVVSA
Trigger: AGCCGAGACGACACCACTGCACTCCAGCCTGGGTGA...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GCTGCAGTTCAGACACGATGCCCAACAGGTCTGCCTTCTCTGCTTGTAGCCTCACGGCCCTGGGAAGCCTaGAGTCATCAGTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: AAVQTRCPTGLPSLLVASRPWEA*SHQWGP
Trigger: AGGACCCCACTGATGACTCCAGGCTTCCCAGGGCCG...TGAGGCTACAAGCAGAGAAGGCAGACCTGTTGGGCATCGTGTCTGAACTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS-3UTR CCA 90 bp GCCTTCTCTGCTTGTAGCCTCACCACCTGGGTCCTGAGCTGGTCCTTTTCCTGCACAATGCCGTGCCAGTaGAGACTGTTCTCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: AFSACSLTTWVLSWSFSCTMPCQ*RLFSWA
Trigger: GGCCCACGAGAACAGTCTCCACTGGCACGGCATTGT...GCAGGAAAAGGACCAGCTCAGGACCCAGGTGGTGAGGCTACAAGCAGAGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS-3UTR GCA 90 bp GCTGCAGTTCAGACACGATGCCCAACAGGTCTGCCTTCTCTGCTTGTAGCCTCAAGCTGGTCCTTTTCCTaGTCCGCTTCGGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: AAVQTRCPTGLPSLLVASSWSFS*SASALG
Trigger: TCCCAGGGCCGAAGCGGAGCAGGAAAAGGACCAGCT...TGAGGCTACAAGCAGAGAAGGCAGACCTGTTGGGCATCGTGTCTGAACTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS-3UTR GCA 90 bp TGCAGTTCAGACACGATGCCCAACAGGTCTGCCTTCTCTGCTTGTAGCCTCACCGTTTCCTCGGCATCGTaGCGCCTGGAGAGAACTCCC +
Preference number: 4 (lower is better)
Translates to: CSSDTMPNRSAFSACSLTVSSAS*RLERTP
Trigger: GGGAGTTCTCTCCAGGCGGCACGATGCCGAGGAAAC...GGTGAGGCTACAAGCAGAGAAGGCAGACCTGTTGGGCATCGTGTCTGAACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS-3UTR GCA 90 bp GACAATGCCGTGCCAGTGGAGACTGTTCTCGTGGGCCCAGGACTATGCTTGATTGTTTCCTCGGCATCGTaGCGCCTGGAGAGAACTCCC +
Preference number: 4 (lower is better)
Translates to: DNAVPVETVLVGPGLCLIVSSAS*RLERTP
Trigger: GGGAGTTCTCTCCAGGCGGCACGATGCCGAGGAAAC...AATCAAGCATAGTCCTGGGCCCACGAGAACAGTCTCCACTGGCACGGCATTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS-3UTR CCA 90 bp TATTTAGACAATGCCGTGCCAGTGGAGACTGTTCTCGTGGGCCCAGGACTATGCCGGCCCTGGGAAGCCTaGAGTCATCAGTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: YLDNAVPVETVLVGPGLCRPWEA*SHQWGP
Trigger: AGGACCCCACTGATGACTCCAGGCTTCCCAGGGCCG...GCATAGTCCTGGGCCCACGAGAACAGTCTCCACTGGCACGGCATTGTCTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS-3UTR CCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCACCTGGGTCCTGAGCTaGTCCTTTTCCTGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPATWVLS*SFSCSA
Trigger: AGCGGAGCAGGAAAAGGACCAGCTCAGGACCCAGGT...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCACAATGCCGTGCCAGTaGAGACTGTTCTCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPATMPCQ*RLFSWA
Trigger: GGCCCACGAGAACAGTCTCCACTGGCACGGCATTGT...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378757.6
CDS-3UTR CCA 90 bp CTTCTGTTTCTCTGTCCAGGCCGAAAGCTCCTCAAATCTCCCTTTCATGGCTTGCGGCATCGTGCCGCCTaGAGAGAACTCCCGACCGGG +
Preference number: 4 (lower is better)
Translates to: LLFLCPGRKLLKSPFHGLRHRAA*RELPTG
Trigger: CCCGGTCGGGAGTTCTCTCCAGGCGGCACGATGCCG...CAAGCCATGAAAGGGAGATTTGAGGAGCTTTCGGCCTGGACAGAGAAACAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR TCA 90 bp GCTGCAGTTCAGACACGATGCCCAACAGGTCTGCCTTCTCTGCTTGTAGCCTCATCACCACCTGGGTCCTaGGCTGGTCCTTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: AAVQTRCPTGLPSLLVASSPPGS*AGPFPA
Trigger: AGCAGGAAAAGGACCAGCTCAGGACCCAGGTGGTGA...TGAGGCTACAAGCAGAGAAGGCAGACCTGTTGGGCATCGTGTCTGAACTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS-3UTR TCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCCGCTGGAGTTCAGCTTaGGCTGCAGTTCAGACACGA +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPARWSSA*AAVQTR
Trigger: TCGTGTCTGAACTGCAGCTCAAGCTGAACTCCAGCG...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp GGTCCTGAGCTGGTCCTTTTCCTGCTCCGCTTCGGCCCTGGGAAGCCTGGAGTCGCCCAGGACTATGCTTaGTTTCTTTTACTGACCCTT +
Preference number: 4 (lower is better)
Translates to: GPELVLFLLRFGPGKPGVAQDYA*FLLLTL
Trigger: AAGGGTCAGTAAAAGAAATCAAGCATAGTCCTGGGC...GACTCCAGGCTTCCCAGGGCCGAAGCGGAGCAGGAAAAGGACCAGCTCAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS-3UTR TCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCCTTGTTCTCGCCCCATaGCGACTCTGCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPALVLAP*RLCISI
Trigger: GATGGAGATGCAGAGTCGTCATGGGGCGAGAACAAG...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTACCGGGATGGGACGCTaGCCAGGGAACCTGCCGGCG +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTTGMGR*PGNLPA
Trigger: CGCCGGCAGGTTCCCTGGTCAGCGTCCCATCCCGGT...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCGGGGTCCATTTCCTGTaGTTTCACTGGGGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAGVHFL*FHWGCP
Trigger: AGGACAGCCCCAGTGAAAGCACAGGAAATGGACCCC...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GCCTTCTCTGCTTGTAGCCTCACCACCTGGGTCCTGAGCTGGTCCTTTTCCTGCGAGTTCAGCTTGAGCTaGAGTTCAGACACGATGCCC +
Preference number: 4 (lower is better)
Translates to: AFSACSLTTWVLSWSFSCEFSLS*SSDTMP
Trigger: GGGCATCGTGTCTGAACTGCAGCTCAAGCTGAACTC...GCAGGAAAAGGACCAGCTCAGGACCCAGGTGGTGAGGCTACAAGCAGAGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS-3UTR GCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCGGAATATTCCGCTGTTaGCGCCAGTCCCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAGIFRC*RQSLSS
Trigger: TGAGGACAGGGACTGGCGGCAACAGCGGAATATTCC...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCTCGGCTCACTGCAACTaGCACTTCCTGGGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPASAHCN*HFLGSS
Trigger: GCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGA...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp CTTGGCCCCATCTGCAGATCTGCTCCTATATTTAGACAATGCCGTGCCAGTGGAGCTCCGCTTCGGCCCTaGGAAGCCTGGAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: LGPICRSAPIFRQCRASGAPLRP*EAWSHQ
Trigger: CTGATGACTCCAGGCTTCCCAGGGCCGAAGCGGAGC...TCCACTGGCACGGCATTGTCTAAATATAGGAGCAGATCTGCAGATGGGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS-3UTR CCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCTGTAGCCTCACCACCTaGGTCCTGAGCTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPACSLTT*VLSWSF
Trigger: AAAGGACCAGCTCAGGACCCAGGTGGTGAGGCTACA...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GCTGCAGTTCAGACACGATGCCCAACAGGTCTGCCTTCTCTGCTTGTAGCCTCATGGGGTCCTTTCAGCTaGTGGTTCTCGGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: AAVQTRCPTGLPSLLVASWGPFS*WFSVRS
Trigger: GCTCCTGACCGAGAACCACCAGCTGAAAGGACCCCA...TGAGGCTACAAGCAGAGAAGGCAGACCTGTTGGGCATCGTGTCTGAACTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS-3UTR TCA 90 bp CCTCAAATCTCCCTTTCATGGCTTGATTATTTAGCTTCATGGCTTCTGCAGGAGACCGGGATGGGACGCTaGCCAGGGAACCTGCCGGCG +
Preference number: 4 (lower is better)
Translates to: PQISLSWLDYLASWLLQETGMGR*PGNLPA
Trigger: CGCCGGCAGGTTCCCTGGTCAGCGTCCCATCCCGGT...CTCCTGCAGAAGCCATGAAGCTAAATAATCAAGCCATGAAAGGGAGATTTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR GCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCTGCAGAAGTTCTATGTaGGGACTCAGCACACCAGGC +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPACRSSM*GLSTPG
Trigger: GCCTGGTGTGCTGAGTCCGCACATAGAACTTCTGCA...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378747.8
CDS-3UTR GCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCGCAGTTCAGACACGATaGCCAACAGGTCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAAVQTR*PTGLPS
Trigger: AGAAGGCAGACCTGTTGGGCATCGTGTCTGAACTGC...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCCACCTGGAGGTTCAGTaGTTCCACTTCGCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAHLEVQ*FHFASN
Trigger: GTTGGAAGCGAAGTGGAAGCACTGAACCTCCAGGTG...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TGCAGTTCAGACACGATGCCCAACAGGTCTGCCTTCTCTGCTTGTAGCCTCACCAGGTTGATGGGACATTaGAGAAGTTCCTGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: CSSDTMPNRSAFSACSLTRLMGH*RSSCRP
Trigger: CGGGCGGCAGGAACTTCTGCAATGTCCCATCAACCT...GGTGAGGCTACAAGCAGAGAAGGCAGACCTGTTGGGCATCGTGTCTGAACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS-3UTR CCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCGCTTCTTTCAGCTGGTaGTTCTCGGTCAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAASFSW*FSVRSS
Trigger: AGAGCTCCTGACCGAGAACCACCAGCTGAAAGAAGC...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCATGGCTTCTTTCAGCTaGTGGTTCTCGGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAMASFS*WFSVRS
Trigger: GCTCCTGACCGAGAACCACCAGCTGAAAGAAGCCAT...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCGCCTGGAGTCATCAGTaGGGTCCTCAGATGACCTTT +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAAWSHQ*GPQMTF
Trigger: AAAGGTCATCTGAGGACCCCACTGATGACTCCAGGC...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACACGGCCCTGGGAAGCCTaGAGTCATCAGTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTRPWEA*SHQWGP
Trigger: AGGACCCCACTGATGACTCCAGGCTTCCCAGGGCCG...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GCTGCAGTTCAGACACGATGCCCAACAGGTCTGCCTTCTCTGCTTGTAGCCTCATGTAGCCTCACCACCTaGGTCCTGAGCTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: AAVQTRCPTGLPSLLVASCSLTT*VLSWSF
Trigger: AAAGGACCAGCTCAGGACCCAGGTGGTGAGGCTACA...TGAGGCTACAAGCAGAGAAGGCAGACCTGTTGGGCATCGTGTCTGAACTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS-3UTR CCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAAACTCCCGACCGGGATaGGACGCTGACCAGGGAACC +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTNSRPG*DADQGT
Trigger: GGTTCCCTGGTCAGCGTCCCATCCCGGTCGGGAGTT...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TCAACAAAGGAATCTTCTGAGGAGCCGCTGGAGTTCAGCTTGAGCTGCAGTTCAAACTCCCGACCGGGATaGGACGCTGACCAGGGAACC +
Preference number: 4 (lower is better)
Translates to: STKESSEEPLEFSLSCSSNSRPG*DADQGT
Trigger: GGTTCCCTGGTCAGCGTCCCATCCCGGTCGGGAGTT...TGAACTGCAGCTCAAGCTGAACTCCAGCGGCTCCTCAGAAGATTCCTTTGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS-3UTR CCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTCGGCATCGTGCCGCCTaGAGAGAACTCCCGACCGGG +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTRHRAA*RELPTG
Trigger: CCCGGTCGGGAGTTCTCTCCAGGCGGCACGATGCCG...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCAACAAAGGAATCTTCTaGGGAGCCGCTGGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPANKGIF*GAAGVQ
Trigger: CTGAACTCCAGCGGCTCCTCAGAAGATTCCTTTGTT...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCCACTTGGGGCAGGAATaGATCGGAATATTCCGCTGT +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAHLGQE*IGIFRC
Trigger: ACAGCGGAATATTCCGATTCATTCCTGCCCCAAGTG...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp CTTCTGCAGGAGGTTCAGAGTGATGGAGTCACACACCAGGAAAGTGGACTTGATAGCTGGTCCTTTTCCTaGTCCGCTTCGGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LLQEVQSDGVTHQESGLDSWSFS*SASALG
Trigger: TCCCAGGGCCGAAGCGGAGCAGGAAAAGGACCAGCT...ATCAAGTCCACTTTCCTGGTGTGTGACTCCATCACTCTGAACCTCCTGCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR GCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCTCCAGGTCCTCTTCCTaGTTGGCAATGGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPASRSSS*LAMVCF
Trigger: GAAGCAAACCATTGCCAAGCAGGAAGAGGACCTGGA...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCAGCAGAACTGCCAGCTaGAATGCCAGTTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPASRTAS*NASCSF
Trigger: AAAGGAGCAACTGGCATTGCAGCTGGCAGTTCTGCT...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCCACATGCTAGCTAACTaGATGAGCAGTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAHMLAN*MSSAAA
Trigger: AGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTG...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TTTAGACAATGCCGTGCCAGTGGAGACTGTTCTCGTGGGCCCAGGACTATGCTTAGGTTGATGGGACATTaGAGAAGTTCCTGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: FRQCRASGDCSRGPRTMLRLMGH*RSSCRP
Trigger: CGGGCGGCAGGAACTTCTGCAATGTCCCATCAACCT...AAGCATAGTCCTGGGCCCACGAGAACAGTCTCCACTGGCACGGCATTGTCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS-3UTR CCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCTTCCTGTGCTTTCACTaGGGCTGTCCTCCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAFLCFH*GCPPFQ
Trigger: CTGAAAAGGAGGACAGCCCCAGTGAAAGCACAGGAA...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCGTGCTCCCCTCTGTCTaGGTTTCAATCTCAGAACGA +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAVLPSV*VSISER
Trigger: TCGTTCTGAGATTGAAACCCAGACAGAGGGGAGCAC...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCGAACCTCTCCACACTTaGGGCAGGAATGAATCGGAA +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAEPLHT*GRNESE
Trigger: TTCCGATTCATTCCTGCCCCAAGTGTGGAGAGGTTC...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TATTTAGACAATGCCGTGCCAGTGGAGACTGTTCTCGTGGGCCCAGGACTATGCGGTCCTTTCAGCTGGTaGTTCTCGGTCAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: YLDNAVPVETVLVGPGLCGPFSW*FSVRSS
Trigger: AGAGCTCCTGACCGAGAACCACCAGCTGAAAGGACC...GCATAGTCCTGGGCCCACGAGAACAGTCTCCACTGGCACGGCATTGTCTAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS-3UTR TCA 90 bp GCTGCAGTTCAGACACGATGCCCAACAGGTCTGCCTTCTCTGCTTGTAGCCTCAAGGCAGCTGAGAGGTTaGTGGGACATTGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: AAVQTRCPTGLPSLLVASRQLRG*WDIAEV
Trigger: AACTTCTGCAATGTCCCATCAACCTCTCAGCTGCCT...TGAGGCTACAAGCAGAGAAGGCAGACCTGTTGGGCATCGTGTCTGAACTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS-3UTR TCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACATCACCACCTGGGTCCTaGGCTGGTCCTTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTSPPGS*AGPFPA
Trigger: AGCAGGAAAAGGACCAGCTCAGGACCCAGGTGGTGA...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp GACAATGCCGTGCCAGTGGAGACTGTTCTCGTGGGCCCAGGACTATGCTTGATTAACAAAGGAATCTTCTaGGGAGCCGCTGGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: DNAVPVETVLVGPGLCLINKGIF*GAAGVQ
Trigger: CTGAACTCCAGCGGCTCCTCAGAAGATTCCTTTGTT...AATCAAGCATAGTCCTGGGCCCACGAGAACAGTCTCCACTGGCACGGCATTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS-3UTR TCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAGCTGGTCTCAAACCCTaGCCCCAAGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTAGLKP*PQVIHP
Trigger: TGGGTGGATCACTTGGGGTCAGGGTTTGAGACCAGC...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp CTTCTGCAGGAGGTTCAGAGTGATGGAGTCACACACCAGGAAAGTGGACTTGATAGGAGCTCTTTCATCTaGTGCAGCAGCTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LLQEVQSDGVTHQESGLDRSSFI*CSSSSG
Trigger: CCCGGAGGAGCTGCTGCAGCAGATGAAAGAGCTCCT...ATCAAGTCCACTTTCCTGGTGTGTGACTCCATCACTCTGAACCTCCTGCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR GCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCCATTCTCTTTCTCTGTaGTCCCCTCTGTCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAHSLSL*SPLSGF
Trigger: AAACCCAGACAGAGGGGAGCACAGAGAAAGAGAATG...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAAACCTCGCGAGTAGCTaGGACTACAGGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTNLASS*DYRHAP
Trigger: TGGCGCATGCCTGTAGTCGCAGCTACTCGCGAGGTT...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTCGGCCCTGGGAAGCCTaGAGTCATCAGTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTRPWEA*SHQWGP
Trigger: AGGACCCCACTGATGACTCCAGGCTTCCCAGGGCCG...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAACCTGGGTCCTGAGCTaGTCCTTTTCCTGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTTWVLS*SFSCSA
Trigger: AGCGGAGCAGGAAAAGGACCAGCTCAGGACCCAGGT...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAACAATGCCGTGCCAGTaGAGACTGTTCTCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTTMPCQ*RLFSWA
Trigger: GGCCCACGAGAACAGTCTCCACTGGCACGGCATTGT...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAAGGGTTCCGCCATGTTaGCCAGGCTGGTCTCAAACC +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTRVPPC*PGWSQT
Trigger: GGTTTGAGACCAGCCTGGCCAACATGGCGGAACCCT...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCACCTGCCGCCCGGCTTaGCTTCGCTCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLTCRPA*LRSGSL
Trigger: CAGTGACCCTGAGCGAAGCCAAGCCGGGCGGCAGGT...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS-3UTR CCA 90 bp TCAACAAAGGAATCTTCTGAGGAGCCGCTGGAGTTCAGCTTGAGCTGCAGTTCAGCCTGGAGTCATCAGTaGGGTCCTTTCAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: STKESSEEPLEFSLSCSSAWSHQ*GPFSWW
Trigger: CCACCAGCTGAAAGGACCCCACTGATGACTCCAGGC...TGAACTGCAGCTCAAGCTGAACTCCAGCGGCTCCTCAGAAGATTCCTTTGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482140.5
3UTR CAA 72 bp ACAAAGGAATCTTCTGAGGAGCCGCTGGAGTTCAGCTaGAGCTGCAGTTCAGACACGATGCCCAACAGGTCT +
Preference number: 4 (lower is better)
Translates to: TKESSEEPLEFS*SCSSDTMPNRS
Trigger: AGACCTGTTGGGCATCGTGTCTGAACTGCAGCTCAAGCTGAACTCCAGCGGCTCCTCAGAAGATTCCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS-3UTR TCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCCAGCTGTTTCAAAGGTaGGGAAGTTGGGTTTACAGA +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAQLFQR*GSWVYR
Trigger: TCTGTAAACCCAACTTCCTCACCTTTGAAACAGCTG...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS-3UTR TCA 90 bp TCAACAAAGGAATCTTCTGAGGAGCCGCTGGAGTTCAGCTTGAGCTGCAGTTCACGCTGGAGTTCAGCTTaGGCTGCAGTTCAGACACGA +
Preference number: 4 (lower is better)
Translates to: STKESSEEPLEFSLSCSSRWSSA*AAVQTR
Trigger: TCGTGTCTGAACTGCAGCTCAAGCTGAACTCCAGCG...TGAACTGCAGCTCAAGCTGAACTCCAGCGGCTCCTCAGAAGATTCCTTTGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS-3UTR TCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCGCCCAGGACTATGCTTaGTTTCTTTTACTGACCCTT +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAAQDYA*FLLLTL
Trigger: AAGGGTCAGTAAAAGAAATCAAGCATAGTCCTGGGC...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCTTAGCTCAGCTTCGCTaGGTTTTGTATGAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPALAQLR*VLYEPL
Trigger: AAGAGGCTCATACAAAACTCAGCGAAGCTGAGCTAA...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCTGCTCCTTTTCCTCATaGATTTTCTCTCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPACSFSS*IFSLAA
Trigger: AGCAGCGAGAGAGAAAATTCATGAGGAAAAGGAGCA...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTAGCTGGTCCTTTTCCTaGTCCGCTTCGGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTSWSFS*SASALG
Trigger: TCCCAGGGCCGAAGCGGAGCAGGAAAAGGACCAGCT...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GCCTTCTCTGCTTGTAGCCTCACCACCTGGGTCCTGAGCTGGTCCTTTTCCTGCATTCTTGGCCCCATCTaGAGATCTGCTCCTATATTT +
Preference number: 4 (lower is better)
Translates to: AFSACSLTTWVLSWSFSCILGPI*RSAPIF
Trigger: AAATATAGGAGCAGATCTGCAGATGGGGCCAAGAAT...GCAGGAAAAGGACCAGCTCAGGACCCAGGTGGTGAGGCTACAAGCAGAGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTGTTTCCTCGGCATCGTaGCGCCTGGAGAGAACTCCC +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTVSSAS*RLERTP
Trigger: GGGAGTTCTCTCCAGGCGGCACGATGCCGAGGAAAC...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCCGGCCCTGGGAAGCCTaGAGTCATCAGTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLRPWEA*SHQWGP
Trigger: AGGACCCCACTGATGACTCCAGGCTTCCCAGGGCCG...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCGCTCCGCTTCGGCCCTaGGAAGCCTGGAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLAPLRP*EAWSHQ
Trigger: CTGATGACTCCAGGCTTCCCAGGGCCGAAGCGGAGC...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp CCTCAAATCTCCCTTTCATGGCTTGATTATTTAGCTTCATGGCTTCTGCAGGAGGCTCCGCTTCGGCCCTaGGAAGCCTGGAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: PQISLSWLDYLASWLLQEAPLRP*EAWSHQ
Trigger: CTGATGACTCCAGGCTTCCCAGGGCCGAAGCGGAGC...CTCCTGCAGAAGCCATGAAGCTAAATAATCAAGCCATGAAAGGGAGATTTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR CCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACATGTAGCCTCACCACCTaGGTCCTGAGCTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTCSLTT*VLSWSF
Trigger: AAAGGACCAGCTCAGGACCCAGGTGGTGAGGCTACA...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp CAGGAGGTTCAGAGTGATGGAGTCACACACCAGGAAAGTGGACTTGATCTGATGTGTAGCCTCACCACCTaGGTCCTGAGCTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: QEVQSDGVTHQESGLDLMCSLTT*VLSWSF
Trigger: AAAGGACCAGCTCAGGACCCAGGTGGTGAGGCTACA...CATCAGATCAAGTCCACTTTCCTGGTGTGTGACTCCATCACTCTGAACCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR CCA 90 bp GACAATGCCGTGCCAGTGGAGACTGTTCTCGTGGGCCCAGGACTATGCTTGATTGTTCGAAGTAATTCTTaGCCCCATCTGCAGATCTGC +
Preference number: 4 (lower is better)
Translates to: DNAVPVETVLVGPGLCLIVRSNS*PHLQIC
Trigger: GCAGATCTGCAGATGGGGCCAAGAATTACTTCGAAC...AATCAAGCATAGTCCTGGGCCCACGAGAACAGTCTCCACTGGCACGGCATTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS-3UTR CCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCAACTCCCGACCGGGATaGGACGCTGACCAGGGAACC +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLNSRPG*DADQGT
Trigger: GGTTCCCTGGTCAGCGTCCCATCCCGGTCGGGAGTT...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCAAACAGCACATACTGTaGCCACTTCATTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAKQHIL*PLHCSC
Trigger: GCAGGAACAATGAAGTGGCCACAGTATGTGCTGTTT...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp CCGAAAGCTCCTCAAATCTCCCTTTCATGGCTTGATTATTTAGCTTCATGGCTTTCCTGCCGCCCGGCTTaGCTTCGCTCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: PKAPQISLSWLDYLASWLSCRPA*LRSGSL
Trigger: CAGTGACCCTGAGCGAAGCCAAGCCGGGCGGCAGGA...AAGCCATGAAGCTAAATAATCAAGCCATGAAAGGGAGATTTGAGGAGCTTTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR CCA 90 bp CAGGAGGTTCAGAGTGATGGAGTCACACACCAGGAAAGTGGACTTGATCTGATGCATGGCTCTTTCAGCTaGTGGTTCTCGGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QEVQSDGVTHQESGLDLMHGSFS*WFSVRS
Trigger: GCTCCTGACCGAGAACCACCAGCTGAAAGAGCCATG...CATCAGATCAAGTCCACTTTCCTGGTGTGTGACTCCATCACTCTGAACCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR TCA 90 bp GTAATTCTTGGCCCCATCTGCAGATCTGCTCCTATATTTAGACAATGCCGTGCCCGCTGGAGTTCAGCTTaGGCTGCAGTTCAGACACGA +
Preference number: 4 (lower is better)
Translates to: VILGPICRSAPIFRQCRARWSSA*AAVQTR
Trigger: TCGTGTCTGAACTGCAGCTCAAGCTGAACTCCAGCG...GGCACGGCATTGTCTAAATATAGGAGCAGATCTGCAGATGGGGCCAAGAATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS-3UTR TCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACACCGGGATGGGACGCTaGCCAGGGAACCTGCCGGCG +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHTGMGR*PGNLPA
Trigger: CGCCGGCAGGTTCCCTGGTCAGCGTCCCATCCCGGT...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp GTTCTTCCTTCTGTTTCTCTGTCCAGGCCGAAAGCTCCTCAAATCTCCCTTTCAGCAGGAGGTTCAGAGTaGTGGAGTCACACACCAGGA +
Preference number: 4 (lower is better)
Translates to: VLPSVSLSRPKAPQISLSAGGSE*WSHTPG
Trigger: TCCTGGTGTGTGACTCCATCACTCTGAACCTCCTGC...TGAAAGGGAGATTTGAGGAGCTTTCGGCCTGGACAGAGAAACAGAAGGAAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR GCA 90 bp CAGTTAACTCCTCATGTTCGAAGTAATTCTTGGCCCCATCTGCAGATCTGCTCCAGCTCTTTCATCTGCTaGAGCAGCTCCTCCGGGGTA +
Preference number: 4 (lower is better)
Translates to: QLTPHVRSNSWPHLQICSSSFIC*SSSSGV
Trigger: TACCCCGGAGGAGCTGCTGCAGCAGATGAAAGAGCT...GGAGCAGATCTGCAGATGGGGCCAAGAATTACTTCGAACATGAGGAGTTAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS-3UTR GCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAGCAGTTCAGACACGATaGCCAACAGGTCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTAVQTR*PTGLPS
Trigger: AGAAGGCAGACCTGTTGGGCATCGTGTCTGAACTGC...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp CAGGAGGTTCAGAGTGATGGAGTCACACACCAGGAAAGTGGACTTGATCTGATGGCAGTTCAGACACGATaGCCAACAGGTCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: QEVQSDGVTHQESGLDLMAVQTR*PTGLPS
Trigger: AGAAGGCAGACCTGTTGGGCATCGTGTCTGAACTGC...CATCAGATCAAGTCCACTTTCCTGGTGTGTGACTCCATCACTCTGAACCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCGTTTCCTCGGCATCGTaGCGCCTGGAGAGAACTCCC +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLVSSAS*RLERTP
Trigger: GGGAGTTCTCTCCAGGCGGCACGATGCCGAGGAAAC...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCTATCAAAGCCACACCTaGCGCCCGGCTTGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLYQSHT*RPAWLR
Trigger: GCGAAGCCAAGCCGGGCGGCAGGTGTGGCTTTGATA...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTAACCTCGCGAGTAGCTaGGACTACAGGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTNLASS*DYRHAP
Trigger: TGGCGCATGCCTGTAGTCGCAGCTACTCGCGAGGTT...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCTCACCCAGGCTGGAGTaGAGTGGTGTCGTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLSPRLE*SGVVSA
Trigger: AGCCGAGACGACACCACTGCACTCCAGCCTGGGTGA...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCGTAAGGATTCTACTTTaGGAGTTGATGGAACTCCAC +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAVRILL*ELMELH
Trigger: GTGGAGTTCCATCAACTCGCAAAGTAGAATCCTTAC...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAGCTTCTTTCAGCTGGTaGTTCTCGGTCAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTASFSW*FSVRSS
Trigger: AGAGCTCCTGACCGAGAACCACCAGCTGAAAGAAGC...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAATGGCTTCTTTCAGCTaGTGGTTCTCGGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTMASFS*WFSVRS
Trigger: GCTCCTGACCGAGAACCACCAGCTGAAAGAAGCCAT...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCCAGGCTGGAGTGCAGTaGTGTCGTCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLQAGVQ*CRLGSL
Trigger: CAGTGAGCCGAGACGACACCACTGCACTCCAGCCTG...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTTCTTCCTTCTGTTTCTCTGTCCAGGCCGAAAGCTCCTCAAATCTCCCTTTCAGGCTCTTTCAGCTGGTaGTTCTCGGTCAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: VLPSVSLSRPKAPQISLSGSFSW*FSVRSS
Trigger: AGAGCTCCTGACCGAGAACCACCAGCTGAAAGAGCC...TGAAAGGGAGATTTGAGGAGCTTTCGGCCTGGACAGAGAAACAGAAGGAAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR CCA 90 bp TGGCGTTCTTCCTTCTGTTTCTCTGTCCAGGCCGAAAGCTCCTCAAATCTCCCTGTCCACTTGACCACATaGCTCTTTCAGCTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: WRSSFCFSVQAESSSNLPVHLTT*LFQLVV
Trigger: AACCACCAGCTGAAAGAGCCATGTGGTCAAGTGGAC...AGGGAGATTTGAGGAGCTTTCGGCCTGGACAGAGAAACAGAAGGAAGAACGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR TCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAAGGCAGCTGAGAGGTTaGTGGGACATTGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTRQLRG*WDIAEV
Trigger: AACTTCTGCAATGTCCCATCAACCTCTCAGCTGCCT...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp TGCAGTTCAGACACGATGCCCAACAGGTCTGCCTTCTCTGCTTGTAGCCTCACCAATTTCTCATTCTCATaGCTCAAGGCCATTAGACGC +
Preference number: 4 (lower is better)
Translates to: CSSDTMPNRSAFSACSLTNFSFS*LKAIRR
Trigger: GCGTCTAATGGCCTTGAGTCATGAGAATGAGAAATT...GGTGAGGCTACAAGCAGAGAAGGCAGACCTGTTGGGCATCGTGTCTGAACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR TCA 90 bp TATTTAGACAATGCCGTGCCAGTGGAGACTGTTCTCGTGGGCCCAGGACTATGCGCCCAGGACTATGCTTaGTTTCTTTTACTGACCCTT +
Preference number: 4 (lower is better)
Translates to: YLDNAVPVETVLVGPGLCAQDYA*FLLLTL
Trigger: AAGGGTCAGTAAAAGAAATCAAGCATAGTCCTGGGC...GCATAGTCCTGGGCCCACGAGAACAGTCTCCACTGGCACGGCATTGTCTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS-3UTR TCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTACCGGGATGGGACGCTaGCCAGGGAACCTGCCGGCG +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQITGMGR*PGNLPA
Trigger: CGCCGGCAGGTTCCCTGGTCAGCGTCCCATCCCGGT...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCGGTAAAGAAATCCAATaGGGCCAATGTTATCGGTTT +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAGKEIQ*GQCYRF
Trigger: AAACCGATAACATTGGCCTCATTGGATTTCTTTACC...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTGGGGTCCATTTCCTGTaGTTTCACTGGGGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTGVHFL*FHWGCP
Trigger: AGGACAGCCCCAGTGAAAGCACAGGAAATGGACCCC...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTAGCTCTTTCATCTGCTaGAGCAGCTCCTCCGGGGTA +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTSSFIC*SSSSGV
Trigger: TACCCCGGAGGAGCTGCTGCAGCAGATGAAAGAGCT...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp CTGTCCAGGCCGAAAGCTCCTCAAATCTCCCTTTCATGGCTTGATTATTTAGCTAGCTCTTTCATCTGCTaGAGCAGCTCCTCCGGGGTA +
Preference number: 4 (lower is better)
Translates to: LSRPKAPQISLSWLDYLASSFIC*SSSSGV
Trigger: TACCCCGGAGGAGCTGCTGCAGCAGATGAAAGAGCT...AGCTAAATAATCAAGCCATGAAAGGGAGATTTGAGGAGCTTTCGGCCTGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCAGGAGCTCTTTCATCTaGTGCAGCAGCTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLRSSFI*CSSSSG
Trigger: CCCGGAGGAGCTGCTGCAGCAGATGAAAGAGCTCCT...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GGCTCACAGTTAACTCCTCATGTTCGAAGTAATTCTTGGCCCCATCTGCAGATCGCAGTTCAGACACGATaGCCAACAGGTCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GSQLTPHVRSNSWPHLQIAVQTR*PTGLPS
Trigger: AGAAGGCAGACCTGTTGGGCATCGTGTCTGAACTGC...GATCTGCAGATGGGGCCAAGAATTACTTCGAACATGAGGAGTTAACTGTGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS-3UTR GCA 90 bp TATTTAGACAATGCCGTGCCAGTGGAGACTGTTCTCGTGGGCCCAGGACTATGCGTGGGCCCAGGACTATaGTTGATTTCTTTTACTGAC +
Preference number: 4 (lower is better)
Translates to: YLDNAVPVETVLVGPGLCVGPGL*LISFTD
Trigger: GTCAGTAAAAGAAATCAAGCATAGTCCTGGGCCCAC...GCATAGTCCTGGGCCCACGAGAACAGTCTCCACTGGCACGGCATTGTCTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS-3UTR GCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCTTCATTTCATCCATTTaGAGCTGTTTGGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAFISSI*SCLEAR
Trigger: TCTGGCTTCCAAACAGCTGCAAATGGATGAAATGAA...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACACTCTTTCAGCAGAACTaGCAGCTGCAATGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTLFQQN*QLQCQL
Trigger: CAACTGGCATTGCAGCTGGCAGTTCTGCTGAAAGAG...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTTGTAGCCTCACCACCTaGGTCCTGAGCTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTCSLTT*VLSWSF
Trigger: AAAGGACCAGCTCAGGACCCAGGTGGTGAGGCTACA...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAGTGCTCCCCTCTGTCTaGGTTTCAATCTCAGAACGA +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTVLPSV*VSISER
Trigger: TCGTTCTGAGATTGAAACCCAGACAGAGGGGAGCAC...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAGAACCTCTCCACACTTaGGGCAGGAATGAATCGGAA +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTEPLHT*GRNESE
Trigger: TTCCGATTCATTCCTGCCCCAAGTGTGGAGAGGTTC...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACCGGCATCGTGCCGCCTaGAGAGAACTCCCGACCGGG +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHRHRAA*RELPTG
Trigger: CCCGGTCGGGAGTTCTCTCCAGGCGGCACGATGCCG...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCGCATTATTATGTTCTTaGAGAAGCTTGTTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAALLCS*RSLLCV
Trigger: GACACACAACAAGCTTCTTCAAGAACATAATAATGC...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCACATCAACACTTAAATaGTGCAATCCATCACGTGAA +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPATSTLK*CNPSRE
Trigger: TTCACGTGATGGATTGCATCATTTAAGTGTTGATGT...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACATTTGGCCTCCTTGAGTaGAACTTCAAGTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTFGLLE*NFKSLH
Trigger: GTGGAGAGACTTGAAGTTGCACTCAAGGAGGCCAAA...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTCACCTGGAGGTTCAGTaGTTCCACTTCGCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTHLEVQ*FHFASN
Trigger: GTTGGAAGCGAAGTGGAAGCACTGAACCTCCAGGTG...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCAATTTTCTCTCTCGCTaGTCTTTCAGCATGAAAATC +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPANFLSR*SFSMKI
Trigger: GATTTTCATGCTGAAAGAGCAGCGAGAGAGAAAATT...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTCCATCAAGGACTGCCTaGCTCCGTCTTCGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTPSRTA*LRLRKH
Trigger: ATGCTTTCGAAGACGGAGGCAGGCAGTCCTTGATGG...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCGGAATATTCCGCTGTTaGCGCCAGTCCCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLGIFRC*RQSLSS
Trigger: TGAGGACAGGGACTGGCGGCAACAGCGGAATATTCC...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTTCCAAGGCCAGGAAGTaGCACCACCAGCTATCAAAG +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTSKARK*HHQLSK
Trigger: CTTTGATAGCTGGTGGTGCCACTTCCTGGCCTTGGA...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS-3UTR CCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTGCCTGGAGTCATCAGTaGGGTCCTCAGATGACCTTT +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTAWSHQ*GPQMTF
Trigger: AAAGGTCATCTGAGGACCCCACTGATGACTCCAGGC...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAGTTCGAAGTAATTCTTaGCCCCATCTGCAGATCTGC +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTVRSNS*PHLQIC
Trigger: GCAGATCTGCAGATGGGGCCAAGAATTACTTCGAAC...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAAACAGAGATGTCACCTaGAGGTTCAGTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTNRDVT*RFSAST
Trigger: AGTGGAAGCACTGAACCTCCAGGTGACATCTCTGTT...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTCGGCATCGTGCCGCCTaGAGAGAACTCCCGACCGGG +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIRHRAA*RELPTG
Trigger: CCCGGTCGGGAGTTCTCTCCAGGCGGCACGATGCCG...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACACACCAGGCCTGTCACTaGCTAATCTTCATTAATGCT +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTHQACH*LIFINA
Trigger: AGCATTAATGAAGATTAGTCAGTGACAGGCCTGGTG...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS-3UTR TCA 90 bp TGGCGTTCTTCCTTCTGTTTCTCTGTCCAGGCCGAAAGCTCCTCAAATCTCCCTCTCCCTTTCATGGCTTaGTTATTTAGCTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: WRSSFCFSVQAESSSNLPLPFMA*LFSFMA
Trigger: AGCCATGAAGCTAAATAATCAAGCCATGAAAGGGAG...AGGGAGATTTGAGGAGCTTTCGGCCTGGACAGAGAAACAGAAGGAAGAACGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR TCA 90 bp CTGTCCAGGCCGAAAGCTCCTCAAATCTCCCTTTCATGGCTTGATTATTTAGCTAACAAAGGAATCTTCTaGGGAGCCGCTGGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: LSRPKAPQISLSWLDYLANKGIF*GAAGVQ
Trigger: CTGAACTCCAGCGGCTCCTCAGAAGATTCCTTTGTT...AGCTAAATAATCAAGCCATGAAAGGGAGATTTGAGGAGCTTTCGGCCTGGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR TCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACATTTCTTTGGCCTCCTTaGGTGCAACTTCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTFLWPP*VQLQVS
Trigger: AGAGACTTGAAGTTGCACTCAAGGAGGCCAAAGAAA...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCCTTCCATCTGAGCCCTaGGGATGGTCATGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLLPSEP*GWSWFP
Trigger: TGGAAACCATGACCATCCTCAGGGCTCAGATGGAAG...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACATGCTCCTTTTCCTCATaGATTTTCTCTCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTCSFSS*IFSLAA
Trigger: AGCAGCGAGAGAGAAAATTCATGAGGAAAAGGAGCA...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCGAGTTCAGCTTGAGCTaGAGTTCAGACACGATGCCC +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLEFSLS*SSDTMP
Trigger: GGGCATCGTGTCTGAACTGCAGCTCAAGCTGAACTC...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TTAACTCCTCATGTTCGAAGTAATTCTTGGCCCCATCTGCAGATCTGCTCCTATGAGTTCAGCTTGAGCTaGAGTTCAGACACGATGCCC +
Preference number: 4 (lower is better)
Translates to: LTPHVRSNSWPHLQICSYEFSLS*SSDTMP
Trigger: GGGCATCGTGTCTGAACTGCAGCTCAAGCTGAACTC...ATAGGAGCAGATCTGCAGATGGGGCCAAGAATTACTTCGAACATGAGGAGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS-3UTR GCA 90 bp TCAACAAAGGAATCTTCTGAGGAGCCGCTGGAGTTCAGCTTGAGCTGCAGTTCAGTGGGCCCAGGACTATaGTTGATTTCTTTTACTGAC +
Preference number: 4 (lower is better)
Translates to: STKESSEEPLEFSLSCSSVGPGL*LISFTD
Trigger: GTCAGTAAAAGAAATCAAGCATAGTCCTGGGCCCAC...TGAACTGCAGCTCAAGCTGAACTCCAGCGGCTCCTCAGAAGATTCCTTTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTTCCAGGTCCTCTTCCTaGTTGGCAATGGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTSRSSS*LAMVCF
Trigger: GAAGCAAACCATTGCCAAGCAGGAAGAGGACCTGGA...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTAGCAGAACTGCCAGCTaGAATGCCAGTTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTSRTAS*NASCSF
Trigger: AAAGGAGCAACTGGCATTGCAGCTGGCAGTTCTGCT...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTCTCTTTCAGCAGAACTaGCAGCTGCAATGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTLFQQN*QLQCQL
Trigger: CAACTGGCATTGCAGCTGGCAGTTCTGCTGAAAGAG...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCCCATCAAGGACTGCCTaGCTCCGTCTTCGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLPSRTA*LRLRKH
Trigger: ATGCTTTCGAAGACGGAGGCAGGCAGTCCTTGATGG...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCATTCTTGGCCCCATCTaGAGATCTGCTCGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLILGPI*RSARAS
Trigger: ACTGGCACGAGCAGATCTGCAGATGGGGCCAAGAAT...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378752.7
CDS-3UTR GCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAAGGCATGCGCCACCATaGTCGGCTAATTTTTGTAAT +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTRHAPP*SANFCN
Trigger: ATTACAAAAATTAGCCGAGCATGGTGGCGCATGCCT...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCTCCAAGGCCAGGAAGTaGCACCACCAGCTATCAAAG +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLSKARK*HHQLSK
Trigger: CTTTGATAGCTGGTGGTGCCACTTCCTGGCCTTGGA...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS-3UTR CCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTTTCCTGTGCTTTCACTaGGGCTGTCCTCCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTFLCFH*GCPPFQ
Trigger: CTGAAAAGGAGGACAGCCCCAGTGAAAGCACAGGAA...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCGCTTCTTTCAGCTGGTaGTTCTCGGTCAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLASFSW*FSVRSS
Trigger: AGAGCTCCTGACCGAGAACCACCAGCTGAAAGAAGC...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCATGGCTTCTTTCAGCTaGTGGTTCTCGGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLMASFS*WFSVRS
Trigger: GCTCCTGACCGAGAACCACCAGCTGAAAGAAGCCAT...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCCAAATCTCCCTTTCATaGCTTGATTATTTAGCTTCA +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAQISLS*LDYLAS
Trigger: TGAAGCTAAATAATCAAGCCATGAAAGGGAGATTTG...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCGCCTGGAGTCATCAGTaGGGTCCTCAGATGACCTTT +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLAWSHQ*GPQMTF
Trigger: AAAGGTCATCTGAGGACCCCACTGATGACTCCAGGC...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCGTAGCACAGTTAATTTaGACTTTTCATCCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAVAQLI*TFHPLF
Trigger: AAACAGAGGATGAAAAGTCCAAATTAACTGTGCTAC...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTCCATTTGCAGCTGTTTaGAAGCCAGAGCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTPFAAV*KPEPSL
Trigger: CAGAGAAGGCTCTGGCTTCCAAACAGCTGCAAATGG...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCACCTGCCGCCCGGCTTaGCTTCGCTCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQITCRPA*LRSGSL
Trigger: CAGTGACCCTGAGCGAAGCCAAGCCGGGCGGCAGGT...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS-3UTR CCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAAAACAGCACATACTGTaGCCACTTCATTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTKQHIL*PLHCSC
Trigger: GCAGGAACAATGAAGTGGCCACAGTATGTGCTGTTT...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCGTTTACTTTTACAGCTaGTCCAGTGTTATTTACTCT +
Preference number: 4 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAVYFYS*SSVIYS
Trigger: AGAGTAAATAACACTGGACCAGCTGTAAAAGTAAAC...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCTCCTGCCGCCCGGCTTaGCTTCGCTCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQISCRPA*LRSGSL
Trigger: CAGTGACCCTGAGCGAAGCCAAGCCGGGCGGCAGGA...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378757.6
CDS-3UTR TCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACACTCCCTTTCATGGCTTaGTTATTTAGCTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTLPFMA*LFSFMA
Trigger: AGCCATGAAGCTAAATAATCAAGCCATGAAAGGGAG...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAAATTTCTCATTCTCATaGCTCAAGGCCATTAGACGC +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTNFSFS*LKAIRR
Trigger: GCGTCTAATGGCCTTGAGTCATGAGAATGAGAAATT...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTTTTGGCCTCCTTGAGTaGAACTTCAAGTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTFGLLE*NFKSLH
Trigger: GTGGAGAGACTTGAAGTTGCACTCAAGGAGGCCAAA...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTCATTCTCTTTCTCTGTaGTCCCCTCTGTCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTHSLSL*SPLSGF
Trigger: AAACCCAGACAGAGGGGAGCACAGAGAAAGAGAATG...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTAGCCAGAGCCTTCTCTaGCAGTTCCAGTTTTTCACT +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTSQSLL*QFQFFT
Trigger: AGTGAAAAACTGGAACTGGCAGAGAAGGCTCTGGCT...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCTCCAGGTCCTCTTCCTaGTTGGCAATGGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLSRSSS*LAMVCF
Trigger: GAAGCAAACCATTGCCAAGCAGGAAGAGGACCTGGA...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACGTTTCCTCGGCATCGTaGCGCCTGGAGAGAACTCCC +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHVSSAS*RLERTP
Trigger: GGGAGTTCTCTCCAGGCGGCACGATGCCGAGGAAAC...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACTATCAAAGCCACACCTaGCGCCCGGCTTGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHYQSHT*RPAWLR
Trigger: GCGAAGCCAAGCCGGGCGGCAGGTGTGGCTTTGATA...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTTTTGATTCTTCTATGTaGGGACTCAGCACACCAGGC +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTFDSSM*GLSTPG
Trigger: GCCTGGTGTGCTGAGTCCGCACATAGAAGAATCAAA...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378748.7
ENST00000378752.7
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCCACATGCTAGCTAACTaGATGAGCAGTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLHMLAN*MSSAAA
Trigger: AGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTG...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCACAAGCCCACAGGCCTaGAGGTACAATGAAAGCATG +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLTSPQA*RYNESM
Trigger: CATGCTTTCATTGTACCTGCAGGCCTGTGGGCTTGT...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTCGGCCCTGGGAAGCCTaGAGTCATCAGTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIRPWEA*SHQWGP
Trigger: AGGACCCCACTGATGACTCCAGGCTTCCCAGGGCCG...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCGCTCCGCTTCGGCCCTaGGAAGCCTGGAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIAPLRP*EAWSHQ
Trigger: CTGATGACTCCAGGCTTCCCAGGGCCGAAGCGGAGC...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTGCTCCGCTTCGGCCCTaGGAAGCCTGGAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIAPLRP*EAWSHQ
Trigger: CTGATGACTCCAGGCTTCCCAGGGCCGAAGCGGAGC...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCGTGCTCCCCTCTGTCTaGGTTTCAATCTCAGAACGA +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLVLPSV*VSISER
Trigger: TCGTTCTGAGATTGAAACCCAGACAGAGGGGAGCAC...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp CCTACAGTAGGCTTGTTCATTGAAGGACCGAGGAGAAGAAATCAGTCAAGAAGAGTGCTCCCCTCTGTCTaGGTTTCAATCTCAGAACGA +
Preference number: 4 (lower is better)
Translates to: PTVGLFIEGPRRRNQSRRVLPSV*VSISER
Trigger: TCGTTCTGAGATTGAAACCCAGACAGAGGGGAGCAC...TCTTCTTGACTGATTTCTTCTCCTCGGTCCTTCAATGAACAAGCCTACTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424614.1
CDS-3UTR CCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTAACAGAGATGTCACCTaGAGGTTCAGTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTNRDVT*RFSAST
Trigger: AGTGGAAGCACTGAACCTCCAGGTGACATCTCTGTT...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACACTTCCTGCTTGGCAATaGTTTGCTTCATTTCATCCA +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTLPAWQ*FASFHP
Trigger: TGGATGAAATGAAGCAAACCATTGCCAAGCAGGAAG...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCGAACCTCTCCACACTTaGGGCAGGAATGAATCGGAA +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLEPLHT*GRNESE
Trigger: TTCCGATTCATTCCTGCCCCAAGTGTGGAGAGGTTC...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCAACTCCCGACCGGGATaGGACGCTGACCAGGGAACC +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQINSRPG*DADQGT
Trigger: GGTTCCCTGGTCAGCGTCCCATCCCGGTCGGGAGTT...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCGCAACTGCCACTTCCTaGGTTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLATATS*VQAILL
Trigger: CAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGC...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACCAGGCTGGAGTGCAGTaGTGTCGTCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHQAGVQ*CRLGSL
Trigger: CAGTGAGCCGAGACGACACCACTGCACTCCAGCCTG...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACTCACCACCTGGGTCCTaGGCTGGTCCTTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHSPPGS*AGPFPA
Trigger: AGCAGGAAAAGGACCAGCTCAGGACCCAGGTGGTGA...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTTTAGCTCAGCTTCGCTaGGTTTTGTATGAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTLAQLR*VLYEPL
Trigger: AAGAGGCTCATACAAAACTCAGCGAAGCTGAGCTAA...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTTGCTCCTTTTCCTCATaGATTTTCTCTCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTCSFSS*IFSLAA
Trigger: AGCAGCGAGAGAGAAAATTCATGAGGAAAAGGAGCA...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAGGTAAAGAAATCCAATaGGGCCAATGTTATCGGTTT +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTGKEIQ*GQCYRF
Trigger: AAACCGATAACATTGGCCTCATTGGATTTCTTTACC...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACAGGAGCTCTTTCATCTaGTGCAGCAGCTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHRSSFI*CSSSSG
Trigger: CCCGGAGGAGCTGCTGCAGCAGATGAAAGAGCTCCT...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCCATTCTCTTTCTCTGTaGTCCCCTCTGTCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLHSLSL*SPLSGF
Trigger: AAACCCAGACAGAGGGGAGCACAGAGAAAGAGAATG...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCAGCCAGAGCCTTCTCTaGCAGTTCCAGTTTTTCACT +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLSQSLL*QFQFFT
Trigger: AGTGAAAAACTGGAACTGGCAGAGAAGGCTCTGGCT...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACATGCTTGGCAATGGTTTaGTTCATTTCATCCATTTGC +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTCLAMV*FISSIC
Trigger: GCAAATGGATGAAATGAAGCAAACCATTGCCAAGCA...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCTCACCCAGGCTGGAGTaGAGTGGTGTCGTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQISPRLE*SGVVSA
Trigger: AGCCGAGACGACACCACTGCACTCCAGCCTGGGTGA...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTTCACCCAGGCTGGAGTaGAGTGGTGTCGTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQISPRLE*SGVVSA
Trigger: AGCCGAGACGACACCACTGCACTCCAGCCTGGGTGA...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCCATGAGCAGTGCAGCTaGTCGCATCAACCAAACATA +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLHEQCS*SHQPNI
Trigger: TATGTTTGGTTGATGCGAGCAGCTGCACTGCTCATG...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAAGGTTGATGGGACATTaGAGAAGTTCTCCAAAAGTT +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTRLMGH*RSSPKV
Trigger: AACTTTTGGAGAACTTCTGCAATGTCCCATCAACCT...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378752.7
CDS-3UTR CCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAGATTATTTAGCTTCATaGCTTCTTTCAGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTDYLAS*LLSAGG
Trigger: ACCACCAGCTGAAAGAAGCCATGAAGCTAAATAATC...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACACAATGCCGTGCCAGTaGAGACTGTTCTCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHTMPCQ*RLFSWA
Trigger: GGCCCACGAGAACAGTCTCCACTGGCACGGCATTGT...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACATCTGCTCGTGCCAGTaGAGACTGTTCTCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHICSCQ*RLFSWA
Trigger: GGCCCACGAGAACAGTCTCCACTGGCACGAGCAGAT...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378752.7
CDS-3UTR CCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTCAGGCTGGAGTGCAGTaGTGTCGTCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIQAGVQ*CRLGSL
Trigger: CAGTGAGCCGAGACGACACCACTGCACTCCAGCCTG...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCCAGGCTGGAGTGCAGTaGTGTCGTCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIQAGVQ*CRLGSL
Trigger: CAGTGAGCCGAGACGACACCACTGCACTCCAGCCTG...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCCAGCTGTTTCAAAGGTaGGGAAGTTGGGTTTACAGA +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLQLFQR*GSWVYR
Trigger: TCTGTAAACCCAACTTCCTCACCTTTGAAACAGCTG...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS-3UTR TCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTAATTTCTCATTCTCATaGCTCAAGGCCATTAGACGC +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTNFSFS*LKAIRR
Trigger: GCGTCTAATGGCCTTGAGTCATGAGAATGAGAAATT...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTTCACCACCTGGGTCCTaGGCTGGTCCTTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQISPPGS*AGPFPA
Trigger: AGCAGGAAAAGGACCAGCTCAGGACCCAGGTGGTGA...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACCGCTGGAGTTCAGCTTaGGCTGCAGTTCAGACACGA +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHRWSSA*AAVQTR
Trigger: TCGTGTCTGAACTGCAGCTCAAGCTGAACTCCAGCG...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAGCATTATTATGTTCTTaGAGAAGCTTGTTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTALLCS*RSLLCV
Trigger: GACACACAACAAGCTTCTTCAAGAACATAATAATGC...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTATGCAATCCATCACGTaGATCTGTAACGTGTCTATG +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTMQSIT*ICNVSM
Trigger: CATAGACACGTTACAGATTCACGTGATGGATTGCAT...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACACATTTTGGACATTTTTaGTTCTTCTATGTGCGGACT +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTHFGHF*FFYVRT
Trigger: AGTCCGCACATAGAAGAATCAAAAATGTCCAAAATG...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378748.7
ENST00000378752.7
CDS-3UTR TCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCTTCTACTTTGCGAGTTaGTGGAACTCCACCAAAGGT +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLFYFAS*WNSTKG
Trigger: ACCTTTGGTGGAGTTCCATCAACTCGCAAAGTAGAA...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp TCATGGCTTGATTATTTAGCTTCATGGCTTCTGCAGGAGGTTCAGAGTGATGGACCAGGAAAGTGGACTTaGTCTGATGAACCAAATCTC +
Preference number: 4 (lower is better)
Translates to: SWLDYLASWLLQEVQSDGPGKWT*SDEPNL
Trigger: GAGATTTGGTTCATCAGATCAAGTCCACTTTCCTGG...TCCATCACTCTGAACCTCCTGCAGAAGCCATGAAGCTAAATAATCAAGCCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR TCA 90 bp TTTATTCAAACCAGTAATGGGATAGAACCCAAATCTTTCAATTCTCCCTCAAGTTCCTGGCCAACATGGTaGAACCCTGTAGTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: FIQTSNGIEPKSFNSPSSSWPTW*NPVVSG
Trigger: CCCGGAGACTACAGGGTTTCACCATGTTGGCCAGGA...ACTTGAGGGAGAATTGAAAGATTTGGGTTCTATCCCATTACTGGTTTGAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424614.1
CDS-3UTR GCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTAGGAGCTCTTTCATCTaGTGCAGCAGCTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIRSSFI*CSSSSG
Trigger: CCCGGAGGAGCTGCTGCAGCAGATGAAAGAGCTCCT...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCGTGGGCCCAGGACTATaGTTGATTTCTTTTACTGAC +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLVGPGL*LISFTD
Trigger: GTCAGTAAAAGAAATCAAGCATAGTCCTGGGCCCAC...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCAGGCATGCGCCACCATaGTCGGCTAATTTTTGTAAT +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLRHAPP*SANFCN
Trigger: ATTACAAAAATTAGCCGAGCATGGTGGCGCATGCCT...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTGTAAGGATTCTACTTTaGGAGTTGATGGAACTCCAC +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTVRILL*ELMELH
Trigger: GTGGAGTTCCATCAACTCGCAAAGTAGAATCCTTAC...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCACCTGGGTCCTGAGCTaGTCCTTTTCCTGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQITWVLS*SFSCSA
Trigger: AGCGGAGCAGGAAAAGGACCAGCTCAGGACCCAGGT...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTACCTGGGTCCTGAGCTaGTCCTTTTCCTGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQITWVLS*SFSCSA
Trigger: AGCGGAGCAGGAAAAGGACCAGCTCAGGACCCAGGT...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACTGTAGCCTCACCACCTaGGTCCTGAGCTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHCSLTT*VLSWSF
Trigger: AAAGGACCAGCTCAGGACCCAGGTGGTGAGGCTACA...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp AACCCAAATCTTTCAATTCTCCCTCAAGTTTCTAAGTCATATCCTCAAATGATCACAATGCCGTGCCAGTaGAGACTGTTCTCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: NPNLSILPQVSKSYPQMITMPCQ*RLFSWA
Trigger: GGCCCACGAGAACAGTCTCCACTGGCACGGCATTGT...GATCATTTGAGGATATGACTTAGAAACTTGAGGGAGAATTGAAAGATTTGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424614.1
CDS-3UTR CCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTCCATGTTGGCCAGGCTaGTCTCAAACCCTGACCCCA +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIPCWPG*SQTLTP
Trigger: TGGGGTCAGGGTTTGAGACCAGCCTGGCCAACATGG...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCAATTTCTCATTCTCATaGCTCAAGGCCATTAGACGC +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLNFSFS*LKAIRR
Trigger: GCGTCTAATGGCCTTGAGTCATGAGAATGAGAAATT...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCCGCTGGAGTTCAGCTTaGGCTGCAGTTCAGACACGA +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIRWSSA*AAVQTR
Trigger: TCGTGTCTGAACTGCAGCTCAAGCTGAACTCCAGCG...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTCGCTGGAGTTCAGCTTaGGCTGCAGTTCAGACACGA +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIRWSSA*AAVQTR
Trigger: TCGTGTCTGAACTGCAGCTCAAGCTGAACTCCAGCG...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTCTTGTTCTCGCCCCATaGCGACTCTGCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQILVLAP*RLCISI
Trigger: GATGGAGATGCAGAGTCGTCATGGGGCGAGAACAAG...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCCTTGTTCTCGCCCCATaGCGACTCTGCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQILVLAP*RLCISI
Trigger: GATGGAGATGCAGAGTCGTCATGGGGCGAGAACAAG...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCATGCAATCCATCACGTaGATCTGTAACGTGTCTATG +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLMQSIT*ICNVSM
Trigger: CATAGACACGTTACAGATTCACGTGATGGATTGCAT...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTGGGGTCCATTTCCTGTaGTTTCACTGGGGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIGVHFL*FHWGCP
Trigger: AGGACAGCCCCAGTGAAAGCACAGGAAATGGACCCC...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCAGCTCTTTCATCTGCTaGAGCAGCTCCTCCGGGGTA +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQISSFIC*SSSSGV
Trigger: TACCCCGGAGGAGCTGCTGCAGCAGATGAAAGAGCT...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTAGCTCTTTCATCTGCTaGAGCAGCTCCTCCGGGGTA +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQISSFIC*SSSSGV
Trigger: TACCCCGGAGGAGCTGCTGCAGCAGATGAAAGAGCT...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACGAGTTCAGCTTGAGCTaGAGTTCAGACACGATGCCC +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHEFSLS*SSDTMP
Trigger: GGGCATCGTGTCTGAACTGCAGCTCAAGCTGAACTC...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GACAACATTCCTTTTCCTACAGTAGGCTTGTTCATTGAAGGACCGAGGAGAAGAATTCTTGGCCCCATCTaGAGATCTGCTCCTATATTT +
Preference number: 4 (lower is better)
Translates to: DNIPFPTVGLFIEGPRRRILGPI*RSAPIF
Trigger: AAATATAGGAGCAGATCTGCAGATGGGGCCAAGAAT...TCTTCTCCTCGGTCCTTCAATGAACAAGCCTACTGTAGGAAAAGGAATGTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424614.1
CDS-3UTR GCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACCACCTGGAGGTTCAGTaGTTCCACTTCGCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHHLEVQ*FHFASN
Trigger: GTTGGAAGCGAAGTGGAAGCACTGAACCTCCAGGTG...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTTTCATTTCATCCATTTaGAGCTGTTTGGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTFISSI*SCLEAR
Trigger: TCTGGCTTCCAAACAGCTGCAAATGGATGAAATGAA...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCAGTCACTCCAAAAGTTaGCCACTTTCTCTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLSHSKS*PLSLQL
Trigger: TAACTGGAGAGAAAGTGGGCAACTTTTGGAGTGACT...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378748.7
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCAGGTTGATGGGACATTaGAGAAGTTCCTGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLRLMGH*RSSCGK
Trigger: TTTTCCACAGGAACTTCTGCAATGTCCCATCAACCT...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378748.7
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCGTAAGGATTCTACTTTaGGAGTTGATGGAACTCCAC +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLVRILL*ELMELH
Trigger: GTGGAGTTCCATCAACTCGCAAAGTAGAATCCTTAC...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTCCACTTCATTGTTCCTaGATCCCTAAAAGGTTCTTA +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTPLHCS*IPKRFL
Trigger: TAAGAACCTTTTAGGGATGCAGGAACAATGAAGTGG...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCAGGTTGATGGGACATTaGAGAAGTTCCTGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIRLMGH*RSSCRP
Trigger: CGGGCGGCAGGAACTTCTGCAATGTCCCATCAACCT...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378757.6
CDS-3UTR CCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACGCTTCTTTCAGCTGGTaGTTCTCGGTCAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHASFSW*FSVRSS
Trigger: AGAGCTCCTGACCGAGAACCACCAGCTGAAAGAAGC...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACACAAATCTCCCTTTCATaGCTTGATTATTTAGCTTCA +
Preference number: 4 (lower is better)
Translates to: CHMLANCMSSAAARINQTQISLS*LDYLAS
Trigger: TGAAGCTAAATAATCAAGCCATGAAAGGGAGATTTG...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACGCCTGGAGTCATCAGTaGGGTCCTCAGATGACCTTT +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHAWSHQ*GPQMTF
Trigger: AAAGGTCATCTGAGGACCCCACTGATGACTCCAGGC...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp CATAGGAAATCGTTTTGTAGAATACTGATAGAAATACATCTTGCAGCTGGGCGCGTTCGAAGTAATTCTTaGCCCCATCTGCAGATCTGC +
Preference number: 4 (lower is better)
Translates to: HRKSFCRILIEIHLAAGRVRSNS*PHLQIC
Trigger: GCAGATCTGCAGATGGGGCCAAGAATTACTTCGAAC...GCGCCCAGCTGCAAGATGTATTTCTATCAGTATTCTACAAAACGATTTCCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424614.1
CDS-3UTR TCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACAGGCAGCTGAGAGGTTaGTGGGACATTGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHRQLRG*WDIAEV
Trigger: AACTTCTGCAATGTCCCATCAACCTCTCAGCTGCCT...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp TATAAAGTGGACAACATTCCTTTTCCTACAGTAGGCTTGTTCATTGAAGGACCGGCCCAGGACTATGCTTaGTTTCTTTTACTGACCCTT +
Preference number: 4 (lower is better)
Translates to: YKVDNIPFPTVGLFIEGPAQDYA*FLLLTL
Trigger: AAGGGTCAGTAAAAGAAATCAAGCATAGTCCTGGGC...CGGTCCTTCAATGAACAAGCCTACTGTAGGAAAAGGAATGTTGTCCACTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424614.1
CDS-3UTR TCA 90 bp CATAGGAAATCGTTTTGTAGAATACTGATAGAAATACATCTTGCAGCTGGGCGCTTTCTTTGGCCTCCTTaGGTGCAACTTCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: HRKSFCRILIEIHLAAGRFLWPP*VQLQVS
Trigger: AGAGACTTGAAGTTGCACTCAAGGAGGCCAAAGAAA...GCGCCCAGCTGCAAGATGTATTTCTATCAGTATTCTACAAAACGATTTCCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424614.1
CDS-3UTR TCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTGCATTATTATGTTCTTaGAGAAGCTTGTTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTALLCS*RSLLCV
Trigger: GACACACAACAAGCTTCTTCAAGAACATAATAATGC...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCCTTCCATCTGAGCCCTaGGGATGGTCATGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQILPSEP*GWSWFP
Trigger: TGGAAACCATGACCATCCTCAGGGCTCAGATGGAAG...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTCTTCCATCTGAGCCCTaGGGATGGTCATGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQILPSEP*GWSWFP
Trigger: TGGAAACCATGACCATCCTCAGGGCTCAGATGGAAG...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTACATCAACACTTAAATaGTGCAATCCATCACGTGAA +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTTSTLK*CNPSRE
Trigger: TTCACGTGATGGATTGCATCATTTAAGTGTTGATGT...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTCATTTTGGACATTTTTaGTTCTTCTATGTGCGGACT +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTHFGHF*FFYVRT
Trigger: AGTCCGCACATAGAAGAATCAAAAATGTCCAAAATG...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378748.7
ENST00000378752.7
CDS-3UTR TCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCGGTAAAGAAATCCAATaGGGCCAATGTTATCGGTTT +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLGKEIQ*GQCYRF
Trigger: AAACCGATAACATTGGCCTCATTGGATTTCTTTACC...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCGCAGTTCAGACACGATaGCCAACAGGTCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIAVQTR*PTGLPS
Trigger: AGAAGGCAGACCTGTTGGGCATCGTGTCTGAACTGC...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCGAGTTCAGCTTGAGCTaGAGTTCAGACACGATGCCC +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIEFSLS*SSDTMP
Trigger: GGGCATCGTGTCTGAACTGCAGCTCAAGCTGAACTC...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTGAGTTCAGCTTGAGCTaGAGTTCAGACACGATGCCC +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIEFSLS*SSDTMP
Trigger: GGGCATCGTGTCTGAACTGCAGCTCAAGCTGAACTC...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCCACCTGGAGGTTCAGTaGTTCCACTTCGCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIHLEVQ*FHFASN
Trigger: GTTGGAAGCGAAGTGGAAGCACTGAACCTCCAGGTG...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCTTCATTTCATCCATTTaGAGCTGTTTGGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLFISSI*SCLEAR
Trigger: TCTGGCTTCCAAACAGCTGCAAATGGATGAAATGAA...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCTGCTTGGCAATGGTTTaGTTCATTTCATCCATTTGC +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLCLAMV*FISSIC
Trigger: GCAAATGGATGAAATGAAGCAAACCATTGCCAAGCA...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTAATTTTCTCTCTCGCTaGTCTTTCAGCATGAAAATC +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTNFLSR*SFSMKI
Trigger: GATTTTCATGCTGAAAGAGCAGCGAGAGAGAAAATT...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACCTCTTTCAGCAGAACTaGCAGCTGCAATGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHLFQQN*QLQCQL
Trigger: CAACTGGCATTGCAGCTGGCAGTTCTGCTGAAAGAG...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCCCATCAAGGACTGCCTaGCTCCGTCTTCGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIPSRTA*LRLRKH
Trigger: ATGCTTTCGAAGACGGAGGCAGGCAGTCCTTGATGG...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp AGACATAGGAAATCGTTTTGTAGAATACTGATAGAAATACATCTTGCAGCTGGGGATAGAAATACATCTTaGAGCTGGGCGCAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: RHRKSFCRILIEIHLAAGDRNTS*SWAQWL
Trigger: GAGCCACTGCGCCCAGCTGCAAGATGTATTTCTATC...CCCAGCTGCAAGATGTATTTCTATCAGTATTCTACAAAACGATTTCCTATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424614.1
CDS-3UTR CCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCTCCAAGGCCAGGAAGTaGCACCACCAGCTATCAAAG +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQISKARK*HHQLSK
Trigger: CTTTGATAGCTGGTGGTGCCACTTCCTGGCCTTGGA...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS-3UTR CCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCGATTATTTAGCTTCATaGCTTCTTTCAGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLDYLAS*LLSAGG
Trigger: ACCACCAGCTGAAAGAAGCCATGAAGCTAAATAATC...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACGAACCTCTCCACACTTaGGGCAGGAATGAATCGGAA +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHEPLHT*GRNESE
Trigger: TTCCGATTCATTCCTGCCCCAAGTGTGGAGAGGTTC...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCAGGCAGCTGAGAGGTTaGTGGGACATTGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIRQLRG*WDIAEV
Trigger: AACTTCTGCAATGTCCCATCAACCTCTCAGCTGCCT...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTAGGCAGCTGAGAGGTTaGTGGGACATTGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIRQLRG*WDIAEV
Trigger: AACTTCTGCAATGTCCCATCAACCTCTCAGCTGCCT...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCAACAAAGGAATCTTCTaGGGAGCCGCTGGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQINKGIF*GAAGVQ
Trigger: CTGAACTCCAGCGGCTCCTCAGAAGATTCCTTTGTT...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTAACAAAGGAATCTTCTaGGGAGCCGCTGGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQINKGIF*GAAGVQ
Trigger: CTGAACTCCAGCGGCTCCTCAGAAGATTCCTTTGTT...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTCACTTGGGGCAGGAATaGATCGGAATATTCCGCTGT +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIHLGQE*IGIFRC
Trigger: ACAGCGGAATATTCCGATTCATTCCTGCCCCAAGTG...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACTTTGGCCTCCTTGAGTaGAACTTCAAGTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHFGLLE*NFKSLH
Trigger: GTGGAGAGACTTGAAGTTGCACTCAAGGAGGCCAAA...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp AGACATAGGAAATCGTTTTGTAGAATACTGATAGAAATACATCTTGCAGCTGGGCATTCTCTTTCTCTGTaGTCCCCTCTGTCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: RHRKSFCRILIEIHLAAGHSLSL*SPLSGF
Trigger: AAACCCAGACAGAGGGGAGCACAGAGAAAGAGAATG...CCCAGCTGCAAGATGTATTTCTATCAGTATTCTACAAAACGATTTCCTATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424614.1
CDS-3UTR GCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCTCCAGGTCCTCTTCCTaGTTGGCAATGGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQISRSSS*LAMVCF
Trigger: GAAGCAAACCATTGCCAAGCAGGAAGAGGACCTGGA...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACTTTGATTCTTCTATGTaGGGACTCAGCACACCAGGC +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHFDSSM*GLSTPG
Trigger: GCCTGGTGTGCTGAGTCCGCACATAGAAGAATCAAA...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378748.7
ENST00000378752.7
CDS-3UTR CCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTCAAATCTCCCTTTCATaGCTTGATTATTTAGCTTCA +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTQISLS*LDYLAS
Trigger: TGAAGCTAAATAATCAAGCCATGAAAGGGAGATTTG...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACGTTCGAAGTAATTCTTaGCCCCATCTGCAGATCTGC +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHVRSNS*PHLQIC
Trigger: GCAGATCTGCAGATGGGGCCAAGAATTACTTCGAAC...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACAACAGAGATGTCACCTaGAGGTTCAGTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHNRDVT*RFSAST
Trigger: AGTGGAAGCACTGAACCTCCAGGTGACATCTCTGTT...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTGTAGCACAGTTAATTTaGACTTTTCATCCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTVAQLI*TFHPLF
Trigger: AAACAGAGGATGAAAAGTCCAAATTAACTGTGCTAC...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTCCATTTGCAGCTGTTTaGAAGCCAGAGCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIPFAAV*KPEPSL
Trigger: CAGAGAAGGCTCTGGCTTCCAAACAGCTGCAAATGG...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCCCATTTGCAGCTGTTTaGAAGCCAGAGCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIPFAAV*KPEPSL
Trigger: CAGAGAAGGCTCTGGCTTCCAAACAGCTGCAAATGG...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCATTTACCAACAGTTTTaGGGAGGTGATACATCAACA +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLIYQQF*GGDTST
Trigger: TGTTGATGTATCACCTCCCCAAAACTGTTGGTAAAT...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCGCAACTGCCACTTCCTaGGTTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIATATS*VQAILL
Trigger: CAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGC...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp AGACATAGGAAATCGTTTTGTAGAATACTGATAGAAATACATCTTGCAGCTGGGAATACATCTTGCAGCTaGGCGCAGTGGCTCATATCT +
Preference number: 4 (lower is better)
Translates to: RHRKSFCRILIEIHLAAGNTSCS*AQWLIS
Trigger: AGATATGAGCCACTGCGCCCAGCTGCAAGATGTATT...CCCAGCTGCAAGATGTATTTCTATCAGTATTCTACAAAACGATTTCCTATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424614.1
CDS-3UTR TCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACCACCAGGCCTGTCACTaGCTAATCTTCATTAATGCT +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHHQACH*LIFINA
Trigger: AGCATTAATGAAGATTAGTCAGTGACAGGCCTGGTG...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS-3UTR TCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACTTTCTTTGGCCTCCTTaGGTGCAACTTCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHFLWPP*VQLQVS
Trigger: AGAGACTTGAAGTTGCACTCAAGGAGGCCAAAGAAA...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACTTCTACTTTGCGAGTTaGTGGAACTCCACCAAAGGT +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHFYFAS*WNSTKG
Trigger: ACCTTTGGTGGAGTTCCATCAACTCGCAAAGTAGAA...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACGTGGGCCCAGGACTATaGTTGATTTCTTTTACTGAC +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHVGPGL*LISFTD
Trigger: GTCAGTAAAAGAAATCAAGCATAGTCCTGGGCCCAC...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp AGACATAGGAAATCGTTTTGTAGAATACTGATAGAAATACATCTTGCAGCTGGGGTGGGCCCAGGACTATaGTTGATTTCTTTTACTGAC +
Preference number: 4 (lower is better)
Translates to: RHRKSFCRILIEIHLAAGVGPGL*LISFTD
Trigger: GTCAGTAAAAGAAATCAAGCATAGTCCTGGGCCCAC...CCCAGCTGCAAGATGTATTTCTATCAGTATTCTACAAAACGATTTCCTATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424614.1
CDS-3UTR GCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTTTTGGCCTCCTTGAGTaGAACTTCAAGTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIFGLLE*NFKSLH
Trigger: GTGGAGAGACTTGAAGTTGCACTCAAGGAGGCCAAA...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp AACCCAAATCTTTCAATTCTCCCTCAAGTTTCTAAGTCATATCCTCAAATGATCTTTGGCCTCCTTGAGTaGAACTTCAAGTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: NPNLSILPQVSKSYPQMIFGLLE*NFKSLH
Trigger: GTGGAGAGACTTGAAGTTGCACTCAAGGAGGCCAAA...GATCATTTGAGGATATGACTTAGAAACTTGAGGGAGAATTGAAAGATTTGGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424614.1
CDS-3UTR GCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCCATTCTCTTTCTCTGTaGTCCCCTCTGTCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIHSLSL*SPLSGF
Trigger: AAACCCAGACAGAGGGGAGCACAGAGAAAGAGAATG...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCAGCCAGAGCCTTCTCTaGCAGTTCCAGTTTTTCACT +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQISQSLL*QFQFFT
Trigger: AGTGAAAAACTGGAACTGGCAGAGAAGGCTCTGGCT...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCCAAATCTCCCTTTCATaGCTTGATTATTTAGCTTCA +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLQISLS*LDYLAS
Trigger: TGAAGCTAAATAATCAAGCCATGAAAGGGAGATTTG...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCGTTCGAAGTAATTCTTaGCCCCATCTGCAGATCTGC +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIVRSNS*PHLQIC
Trigger: GCAGATCTGCAGATGGGGCCAAGAATTACTTCGAAC...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCGTTTACTTTTACAGCTaGTCCAGTGTTATTTACTCT +
Preference number: 4 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLVYFYS*SSVIYS
Trigger: AGAGTAAATAACACTGGACCAGCTGTAAAAGTAAAC...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR CAA 72 bp TATAAAGTGGACAACATTCCTTTTCCTACAGTAGGCTaGTTCATTGAAGGACCGAGGAGAAGAAATCAGTCA +
Preference number: 4 (lower is better)
Translates to: YKVDNIPFPTVG*FIEGPRRRNQS
Trigger: TGACTGATTTCTTCTCCTCGGTCCTTCAATGAACAAGCCTACTGTAGGAAAAGGAATGTTGTCCACTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424614.1
CDS-3UTR TCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTCAGCTGTTTCAAAGGTaGGGAAGTTGGGTTTACAGA +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIQLFQR*GSWVYR
Trigger: TCTGTAAACCCAACTTCCTCACCTTTGAAACAGCTG...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS-3UTR TCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACCTCCCTTTCATGGCTTaGTTATTTAGCTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHLPFMA*LFSFMA
Trigger: AGCCATGAAGCTAAATAATCAAGCCATGAAAGGGAG...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACAATTTCTCATTCTCATaGCTCAAGGCCATTAGACGC +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHNFSFS*LKAIRR
Trigger: GCGTCTAATGGCCTTGAGTCATGAGAATGAGAAATT...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTGCCCAGGACTATGCTTaGTTTCTTTTACTGACCCTT +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIAQDYA*FLLLTL
Trigger: AAGGGTCAGTAAAAGAAATCAAGCATAGTCCTGGGC...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCGCCCAGGACTATGCTTaGTTTCTTTTACTGACCCTT +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIAQDYA*FLLLTL
Trigger: AAGGGTCAGTAAAAGAAATCAAGCATAGTCCTGGGC...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTTTTCTTTGGCCTCCTTaGGTGCAACTTCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIFLWPP*VQLQVS
Trigger: AGAGACTTGAAGTTGCACTCAAGGAGGCCAAAGAAA...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp TACTTTATTCAAACCAGTAATGGGATAGAACCCAAATCTTTCAATTCTCCCTCAAGTAGGCTTGTTCATTaGAGGACCGAGGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: YFIQTSNGIEPKSFNSPSSRLVH*RTEEKK
Trigger: TTTCTTCTCCTCGGTCCTTCAATGAACAAGCCTACT...TGAGGGAGAATTGAAAGATTTGGGTTCTATCCCATTACTGGTTTGAATAAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424614.1
CDS-3UTR GCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCAGGTTGATGGGACATTaGAGAAGTTCTATGTGCGGA +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIRLMGH*RSSMCG
Trigger: TCCGCACATAGAACTTCTGCAATGTCCCATCAACCT...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378747.8
CDS-3UTR GCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTGTGGGCCCAGGACTATaGTTGATTTCTTTTACTGAC +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIVGPGL*LISFTD
Trigger: GTCAGTAAAAGAAATCAAGCATAGTCCTGGGCCCAC...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACATTCTTGGCCCCATCTaGAGATCTGCTCCTATATTT +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHILGPI*RSAPIF
Trigger: AAATATAGGAGCAGATCTGCAGATGGGGCCAAGAAT...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378757.6
CDS-3UTR CCA 90 bp CCGAAAGCTCCTCAAATCTCCCTTTCATGGCTTGATTATTTAGCTTCATGGCTTCAAATCTCCCTTTCATaGCTTGATTATTTAGCTTCA +
Preference number: 4 (lower is better)
Translates to: PKAPQISLSWLDYLASWLQISLS*LDYLAS
Trigger: TGAAGCTAAATAATCAAGCCATGAAAGGGAGATTTG...AAGCCATGAAGCTAAATAATCAAGCCATGAAAGGGAGATTTGAGGAGCTTTCGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR CCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACCTTCCTGCTTGGCAATaGTTTGCTTCATTTCATCCA +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHLPAWQ*FASFHP
Trigger: TGGATGAAATGAAGCAAACCATTGCCAAGCAGGAAG...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR CAA 72 bp ATTATTATCAGAAGAGTAGTAGGTAAGGATTCTACTTaGCGAGTTGATGGAACTCCACCAAAGGTGTTCTAC +
Preference number: 4 (lower is better)
Translates to: IIIRRVVGKDST*RVDGTPPKVFY
Trigger: GTAGAACACCTTTGGTGGAGTTCCATCAACTCGCAAAGTAGAATCCTTACCTACTACTCTTCTGATAATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTCTCCCTTTCATGGCTTaGTTATTTAGCTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQILPFMA*LFSFMA
Trigger: AGCCATGAAGCTAAATAATCAAGCCATGAAAGGGAG...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTATGCAATCCATCACGTaGATCTGTAACGTGTCTATG +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIMQSIT*ICNVSM
Trigger: CATAGACACGTTACAGATTCACGTGATGGATTGCAT...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTATTCTTGGCCCCATCTaGAGATCTGCTCCTATATTT +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIILGPI*RSAPIF
Trigger: AAATATAGGAGCAGATCTGCAGATGGGGCCAAGAAT...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378757.6
CDS-3UTR CCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCCTTCCTGCTTGGCAATaGTTTGCTTCATTTCATCCA +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQILPAWQ*FASFHP
Trigger: TGGATGAAATGAAGCAAACCATTGCCAAGCAGGAAG...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACTTGCAGAAGTTCCTGTaGAAAAGTCACTCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHLQKFL*KSHSKS
Trigger: ACTTTTGGAGTGACTTTTCCACAGGAACTTCTGCAA...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378748.7
CDS-3UTR TCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACACATCAACACTTAAATaGTGCAATCCATCACGTGAA +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHTSTLK*CNPSRE
Trigger: TTCACGTGATGGATTGCATCATTTAAGTGTTGATGT...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCTTCATTTCATCCATTTaGAGCTGTTTGGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIFISSI*SCLEAR
Trigger: TCTGGCTTCCAAACAGCTGCAAATGGATGAAATGAA...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTTGCTTGGCAATGGTTTaGTTCATTTCATCCATTTGC +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQICLAMV*FISSIC
Trigger: GCAAATGGATGAAATGAAGCAAACCATTGCCAAGCA...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCGATTATTTAGCTTCATaGCTTCTTTCAGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIDYLAS*LLSAGG
Trigger: ACCACCAGCTGAAAGAAGCCATGAAGCTAAATAATC...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACATTTACCAACAGTTTTaGGGAGGTGATACATCAACA +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHIYQQF*GGDTST
Trigger: TGTTGATGTATCACCTCCCCAAAACTGTTGGTAAAT...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR TCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTACATCAACACTTAAATaGTGCAATCCATCACGTGAA +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQITSTLK*CNPSRE
Trigger: TTCACGTGATGGATTGCATCATTTAAGTGTTGATGT...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR GCA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTAATTTTCTCTCTCGCTaGTCTTTCAGCATGAAAATC +
Preference number: 4 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQINFLSR*SFSMKI
Trigger: GATTTTCATGCTGAAAGAGCAGCGAGAGAGAAAATT...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACGTAGCACAGTTAATTTaGACTTTTCATCCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHVAQLI*TFHPLF
Trigger: AAACAGAGGATGAAAAGTCCAAATTAACTGTGCTAC...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCATTTACCAACAGTTTTaGGGAGGTGATACATCAACA +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIIYQQF*GGDTST
Trigger: TGTTGATGTATCACCTCCCCAAAACTGTTGGTAAAT...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
3UTR CAA 72 bp TGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTaGGCAAATTGTAGACTTACAAAACAAGGCAAATCC +
Preference number: 4 (lower is better)
Translates to: CLLLQLVQCYLL*ANCRLTKQGKS
Trigger: GGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CCA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCGTTTACTTTTACAGCTaGTCCAGTGTTATTTACTCT +
Preference number: 4 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIVYFYS*SSVIYS
Trigger: AGAGTAAATAACACTGGACCAGCTGTAAAAGTAAAC...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS CCA 90 bp TGTTTCCTCGGCATCGTGCCGCCTGGAGAGAACTCCCGACCGGGATaGGACGCTGACCAGGGAACCTGCCGGCGGGCGGCGGCGGTGGCG +
Preference number: 5 (lower is better)
Translates to: CFLGIVPPGENSRPG*DADQGTCRRAAAVA
Trigger: CGCCACCGCCGCCGCCCGCCGGCAGGTTCCCTGGTCAGCGTCCCATCCCGGTCGGGAGTTCTCTCCAGGCGGCACGATGCCGAGGAAACA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000430081.5
ENST00000482140.5
ENST00000487935.1
CDS GCA 90 bp CCGCCCGGCTTGGCTTCGCTCAGGGTCACTGTTTCCTCGGCATCGTaGCGCCTGGAGAGAACTCCCGACCGGGATGGGACGCTGACCAGG +
Preference number: 5 (lower is better)
Translates to: PPGLASLRVTVSSAS*RLERTPDRDGTLTR
Trigger: CCTGGTCAGCGTCCCATCCCGGTCGGGAGTTCTCTCCAGGCGGCACGATGCCGAGGAAACAGTGACCCTGAGCGAAGCCAAGCCGGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000430081.5
ENST00000482140.5
ENST00000487935.1
CDS GCA 90 bp CTTCCCGCAGATCCCGTAGTGGAGGCTGGAGCCGCAGGGGGTCGCTaGCGCCCACAGAAAGAGGAGAATGCCAGGCATCCTCGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LPADPVVEAGAAGGR*RPQKEENARHPRRE
Trigger: CTCCCTCCGAGGATGCCTGGCATTCTCCTCTTTCTGTGGGCGGCAGCGACCCCCTGCGGCTCCAGCCTCCACTACGGGATCTGCGGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263036.9
ENST00000378764.6
CDS-3UTR CAA 90 bp GGTCCTGAGCTGGTCCTTTTCCTGCTCCGCTTCGGCCCTGGGAAGCCTGGAGTCTTCCTGCCGCCCGGCTaGGCTTCGCTCAGGGTCACT +
Preference number: 5 (lower is better)
Translates to: GPELVLFLLRFGPGKPGVFLPPG*ASLRVT
Trigger: AGTGACCCTGAGCGAAGCCAAGCCGGGCGGCAGGAA...GACTCCAGGCTTCCCAGGGCCGAAGCGGAGCAGGAAAAGGACCAGCTCAGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS CCA 90 bp GAGTTCGTCTTCCCCGTGTCTTCCCGCAGATCCCGTAGTGGAGGCTaGAGCCGCAGGGGGTCGCTGCCGCCCACAGAAAGAGGAGAATGC +
Preference number: 5 (lower is better)
Translates to: EFVFPVSSRRSRSGG*SRRGSLPPTERGEC
Trigger: GCATTCTCCTCTTTCTGTGGGCGGCAGCGACCCCCTGCGGCTCCAGCCTCCACTACGGGATCTGCGGGAAGACACGGGGAAGACGAACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263036.9
ENST00000378764.6
CDS TCA 90 bp AGCCACACCCTCGCTGTCCGTGCGGGGTCGAGGCTGGGACCCGGGTaGACAGGGACTGCTCTAAGGCGTCACTGTGACGGCGTTAATCAA +
Preference number: 5 (lower is better)
Translates to: SHTLAVRAGSRLGPG*TGTALRRHCDGVNQ
Trigger: TTGATTAACGCCGTCACAGTGACGCCTTAGAGCAGTCCCTGTTCACCCGGGTCCCAGCCTCGACCCCGCACGGACAGCGAGGGTGTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263036.9
ENST00000378764.6
CDS-3UTR CAA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCCACCTGCCGCCCGGCTaGGCTTCGCTCAGGGTCACT +
Preference number: 5 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAHLPPG*ASLRVT
Trigger: AGTGACCCTGAGCGAAGCCAAGCCGGGCGGCAGGTG...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS-3UTR CAA 90 bp GGTCCTGAGCTGGTCCTTTTCCTGCTCCGCTTCGGCCCTGGGAAGCCTGGAGTCGAGGTTGATGGGACATaGCAGAAGTTCCTGCCGCCC +
Preference number: 5 (lower is better)
Translates to: GPELVLFLLRFGPGKPGVEVDGT*QKFLPP
Trigger: GGGCGGCAGGAACTTCTGCAATGTCCCATCAACCTC...GACTCCAGGCTTCCCAGGGCCGAAGCGGAGCAGGAAAAGGACCAGCTCAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS GCA 90 bp GGCTCTTTCAGCTGGTGGTTCTCGGTCAGGAGCTCTTTCATCTGCTaGAGCAGCTCCTCCGGGGTAAACGTGTCCAGGTTTGGGTGGGCC +
Preference number: 5 (lower is better)
Translates to: GSFSWWFSVRSSFIC*SSSSGVNVSRFGWA
Trigger: GGCCCACCCAAACCTGGACACGTTTACCCCGGAGGAGCTGCTGCAGCAGATGAAAGAGCTCCTGACCGAGAACCACCAGCTGAAAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS GCA 90 bp GGTCCTTTCAGCTGGTGGTTCTCGGTCAGGAGCTCTTTCATCTGCTaGAGCAGCTCCTCCGGGGTAAACGTGTCCAGGTTTGGGTGGGCC +
Preference number: 5 (lower is better)
Translates to: GPFSWWFSVRSSFIC*SSSSGVNVSRFGWA
Trigger: GGCCCACCCAAACCTGGACACGTTTACCCCGGAGGAGCTGCTGCAGCAGATGAAAGAGCTCCTGACCGAGAACCACCAGCTGAAAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS CCA 90 bp GAAGTTGGGTTTACAGAGGCGTACGGCTCATCCAAGGCCAGGAAGTaGCACCACCAGCTATCAAAGCCACACCCTCGCTGTCCGTGCGGG +
Preference number: 5 (lower is better)
Translates to: EVGFTEAYGSSKARK*HHQLSKPHPRCPCG
Trigger: CCCGCACGGACAGCGAGGGTGTGGCTTTGATAGCTGGTGGTGCCACTTCCTGGCCTTGGATGAGCCGTACGCCTCTGTAAACCCAACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263036.9
ENST00000378764.6
CDS CCA 90 bp GAAGTTGGGTTTACAGAGGCGTACGGCTCATCCAAGGCCAGGAAGTaGCACCACCAGCTATCAAAGCCACACCTGCCGCCCGGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: EVGFTEAYGSSKARK*HHQLSKPHLPPGLA
Trigger: AGCCAAGCCGGGCGGCAGGTGTGGCTTTGATAGCTGGTGGTGCCACTTCCTGGCCTTGGATGAGCCGTACGCCTCTGTAAACCCAACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS-3UTR CAA 90 bp TGCAGTTCAGACACGATGCCCAACAGGTCTGCCTTCTCTGCTTGTAGCCTCACCTTCCTGCCGCCCGGCTaGGCTTCGCTCAGGGTCACT +
Preference number: 5 (lower is better)
Translates to: CSSDTMPNRSAFSACSLTFLPPG*ASLRVT
Trigger: AGTGACCCTGAGCGAAGCCAAGCCGGGCGGCAGGAA...GGTGAGGCTACAAGCAGAGAAGGCAGACCTGTTGGGCATCGTGTCTGAACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430081.5
ENST00000482140.5
CDS GCA 90 bp GCTTCTTTCAGCTGGTGGTTCTCGGTCAGGAGCTCTTTCATCTGCTaGAGCAGCTCCTCCGGGGTAAACGTGTCCAGGTTTGGGTGGGCC +
Preference number: 5 (lower is better)
Translates to: ASFSWWFSVRSSFIC*SSSSGVNVSRFGWA
Trigger: GGCCCACCCAAACCTGGACACGTTTACCCCGGAGGAGCTGCTGCAGCAGATGAAAGAGCTCCTGACCGAGAACCACCAGCTGAAAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000378764.6
CDS GCA 90 bp TGGGGTCCTTTCAGCTGGTGGTTCTCGGTCAGGAGCTCTTTCATCTaGTGCAGCAGCTCCTCCGGGGTAAACGTGTCCAGGTTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: WGPFSWWFSVRSSFI*CSSSSGVNVSRFGW
Trigger: CCACCCAAACCTGGACACGTTTACCCCGGAGGAGCTGCTGCAGCAGATGAAAGAGCTCCTGACCGAGAACCACCAGCTGAAAGGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS GCA 90 bp GTACCTTTCAGCTGGTGGTTCTCGGTCAGGAGCTCTTTCATCTGCTaGAGCAGCTCCTCCGGGGTAAACGTGTCCAGGTTTGGGTGGGCC +
Preference number: 5 (lower is better)
Translates to: VPFSWWFSVRSSFIC*SSSSGVNVSRFGWA
Trigger: GGCCCACCCAAACCTGGACACGTTTACCCCGGAGGAGCTGCTGCAGCAGATGAAAGAGCTCCTGACCGAGAACCACCAGCTGAAAGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487935.1
CDS-3UTR CAA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCCGGAATATTCCGCTGTaGCCGCCAGTCCCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPARNIPL*PPVPVL
Trigger: GAGGACAGGGACTGGCGGCAACAGCGGAATATTCCG...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS TCA 90 bp CTTTCACTGGGGCTGTCCTCCTTTTCAGTGAGGCAGCTGAGAGGTTaGTGGGACATTGCAGAAGTTCCTGCCGCCCGGCTTGGCTTCGCT +
Preference number: 5 (lower is better)
Translates to: LSLGLSSFSVRQLRG*WDIAEVPAARLGFA
Trigger: AGCGAAGCCAAGCCGGGCGGCAGGAACTTCTGCAATGTCCCATCAACCTCTCAGCTGCCTCACTGAAAAGGAGGACAGCCCCAGTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378757.6
ENST00000430081.5
ENST00000482140.5
ENST00000487935.1
CDS GCA 90 bp CATGGCTCTTTCAGCTGGTGGTTCTCGGTCAGGAGCTCTTTCATCTaGTGCAGCAGCTCCTCCGGGGTAAACGTGTCCAGGTTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: HGSFSWWFSVRSSFI*CSSSSGVNVSRFGW
Trigger: CCACCCAAACCTGGACACGTTTACCCCGGAGGAGCTGCTGCAGCAGATGAAAGAGCTCCTGACCGAGAACCACCAGCTGAAAGAGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR CAA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCGAGGTTGATGGGACATaGCAGAAGTTCCTGCCGCCC +
Preference number: 5 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAEVDGT*QKFLPP
Trigger: GGGCGGCAGGAACTTCTGCAATGTCCCATCAACCTC...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378757.6
CDS GCA 90 bp ATGGCTTCTTTCAGCTGGTGGTTCTCGGTCAGGAGCTCTTTCATCTaGTGCAGCAGCTCCTCCGGGGTAAACGTGTCCAGGTTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: MASFSWWFSVRSSFI*CSSSSGVNVSRFGW
Trigger: CCACCCAAACCTGGACACGTTTACCCCGGAGGAGCTGCTGCAGCAGATGAAAGAGCTCCTGACCGAGAACCACCAGCTGAAAGAAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000378764.6
CDS GCA 90 bp CTTGTACCTTTCAGCTGGTGGTTCTCGGTCAGGAGCTCTTTCATCTaGTGCAGCAGCTCCTCCGGGGTAAACGTGTCCAGGTTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: LVPFSWWFSVRSSFI*CSSSSGVNVSRFGW
Trigger: CCACCCAAACCTGGACACGTTTACCCCGGAGGAGCTGCTGCAGCAGATGAAAGAGCTCCTGACCGAGAACCACCAGCTGAAAGGTACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487935.1
CDS TCA 90 bp AACGTGTCTATGTCAGGCAGAACCTCTCCACACTTGGGGCAGGAATaGATCGGAATATTCCGCTGTTGCCGCCAGTCCCTGTCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: NVSMSGRTSPHLGQE*IGIFRCCRQSLSSA
Trigger: AGCTGAGGACAGGGACTGGCGGCAACAGCGGAATATTCCGATTCATTCCTGCCCCAAGTGTGGAGAGGTTCTGCCTGACATAGACACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000378764.6
ENST00000469025.1
CDS-3UTR CAA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACACGGAATATTCCGCTGTaGCCGCCAGTCCCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: CHMLANCMSSAAARINQTRNIPL*PPVPVL
Trigger: GAGGACAGGGACTGGCGGCAACAGCGGAATATTCCG...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS TCA 90 bp CTTTCACTGGGGCTGTCCTCCTTTTCAGTGAGGCAGCTGAGAGGTTaGTGGGACATTGCAGAAGTTCTATGTGCGGACTCAGCACACCAG +
Preference number: 5 (lower is better)
Translates to: LSLGLSSFSVRQLRG*WDIAEVLCADSAHQ
Trigger: CTGGTGTGCTGAGTCCGCACATAGAACTTCTGCAATGTCCCATCAACCTCTCAGCTGCCTCACTGAAAAGGAGGACAGCCCCAGTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378764.6
CDS CCA 90 bp CGTGAATCTGTAACGTGTCTATGTCAGGCAGAACCTCTCCACACTTaGGGCAGGAATGAATCGGAATATTCCGCTGTTGCCGCCAGTCCC +
Preference number: 5 (lower is better)
Translates to: RESVTCLCQAEPLHT*GRNESEYSAVAASP
Trigger: GGGACTGGCGGCAACAGCGGAATATTCCGATTCATTCCTGCCCCAAGTGTGGAGAGGTTCTGCCTGACATAGACACGTTACAGATTCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000378764.6
ENST00000469025.1
CDS-3UTR CAA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCCTTTCTTTGGCCTCCTaGAGTGCAACTTCAAGTCTC +
Preference number: 5 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPALSLAS*SATSSL
Trigger: GAGACTTGAAGTTGCACTCAAGGAGGCCAAAGAAAG...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCAGGTCCTCTTCCTGCTaGGCAATGGTTTGCTTCATT +
Preference number: 5 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPARSSSC*AMVCFI
Trigger: AATGAAGCAAACCATTGCCAAGCAGGAAGAGGACCT...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAGCTGGTCAGAGTCACTaGTTCTCGCCCCATGACGAC +
Preference number: 5 (lower is better)
Translates to: CHMLANCMSSAAARINQTAGQSH*FSPHDD
Trigger: GTCGTCATGGGGCGAGAACAAGTGACTCTGACCAGC...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCGAGGTTGATGGGACATaGCAGAAGTTCCTGTGGAAA +
Preference number: 5 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAEVDGT*QKFLWK
Trigger: TTTCCACAGGAACTTCTGCAATGTCCCATCAACCTC...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378748.7
CDS-3UTR CAA 90 bp CAGGAGGTTCAGAGTGATGGAGTCACACACCAGGAAAGTGGACTTGATCTGATGGAGGTTGATGGGACATaGCAGAAGTTCCTGCCGCCC +
Preference number: 5 (lower is better)
Translates to: QEVQSDGVTHQESGLDLMEVDGT*QKFLPP
Trigger: GGGCGGCAGGAACTTCTGCAATGTCCCATCAACCTC...CATCAGATCAAGTCCACTTTCCTGGTGTGTGACTCCATCACTCTGAACCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS TCA 90 bp ATCATAAAGAAGTTACTTCCTCAGGTCACAACATTTGACCTCCGGTaGCAAGCACCCAGTGACGAGCCTGCCCAGCCTGTCTGCCTGACA +
Preference number: 5 (lower is better)
Translates to: IIKKLLPQVTTFDLR*QAPSDEPAQPVCLT
Trigger: TGTCAGGCAGACAGGCTGGGCAGGCTCGTCACTGGGTGCTTGTCACCGGAGGTCAAATGTTGTGACCTGAGGAAGTAACTTCTTTATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486862.1
CDS GCA 90 bp GATCTGCTCGTGCCAGTGGAGACTGTTCTCGTGGGCCCAGGACTATaGTTGATTTCTTTTACTGACCCTTCTGCTTCTCCTTCAGCCATC +
Preference number: 5 (lower is better)
Translates to: DLLVPVETVLVGPGL*LISFTDPSASPSAI
Trigger: GATGGCTGAAGGAGAAGCAGAAGGGTCAGTAAAAGAAATCAAGCATAGTCCTGGGCCCACGAGAACAGTCTCCACTGGCACGAGCAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378752.7
ENST00000378764.6
CDS-3UTR CAA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCGGTAAGGATTCTACTTaGCGAGTTGATGGAACTCCA +
Preference number: 5 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAGKDST*RVDGTP
Trigger: TGGAGTTCCATCAACTCGCAAAGTAGAATCCTTACC...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCCGGAATATTCCGCTGTaGCCGCCAGTCCCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLRNIPL*PPVPVL
Trigger: GAGGACAGGGACTGGCGGCAACAGCGGAATATTCCG...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS GCA 90 bp TTCACATACGTGCCAGTGGAGACTGTTCTCGTGGGCCCAGGACTATaGTTGATTTCTTTTACTGACCCTTCTGCTTCTCCTTCAGCCATC +
Preference number: 5 (lower is better)
Translates to: FTYVPVETVLVGPGL*LISFTDPSASPSAI
Trigger: GATGGCTGAAGGAGAAGCAGAAGGGTCAGTAAAAGAAATCAAGCATAGTCCTGGGCCCACGAGAACAGTCTCCACTGGCACGTATGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486862.1
CDS-3UTR CAA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCTTTTGTATGAGCCTCTaGAAGCTCCTTAAACAGAGA +
Preference number: 5 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPAFCMSL*KLLKQR
Trigger: TCTCTGTTTAAGGAGCTTCAAGAGGCTCATACAAAA...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCGCTGGTCAGAGTCACTaGTTCTCGCCCCATGACGAC +
Preference number: 5 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLAGQSH*FSPHDD
Trigger: GTCGTCATGGGGCGAGAACAAGTGACTCTGACCAGC...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACCACCTGCCGCCCGGCTaGGCTTCGCTCAGGGTCACT +
Preference number: 5 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHHLPPG*ASLRVT
Trigger: AGTGACCCTGAGCGAAGCCAAGCCGGGCGGCAGGTG...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS GCA 90 bp AGGCGTCACTGTGACGGCGTTAATCAAAATAAATCATTAATCAAATaGAGTGTGCGGAGTTCGTCTTCCCCGTGTCTTCCCGCAGATCCC +
Preference number: 5 (lower is better)
Translates to: RRHCDGVNQNKSLIK*SVRSSSSPCLPADP
Trigger: GGGATCTGCGGGAAGACACGGGGAAGACGAACTCCGCACACTGCATTTGATTAATGATTTATTTTGATTAACGCCGTCACAGTGACGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263036.9
ENST00000378764.6
CDS-3UTR CAA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAGGCCCAGGACTATGCTaGATTTCTTTTACTGACCCT +
Preference number: 5 (lower is better)
Translates to: CHMLANCMSSAAARINQTGPGLC*ISFTDP
Trigger: AGGGTCAGTAAAAGAAATCAAGCATAGTCCTGGGCC...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp GTCGTCTCGGCTCACTGCAACTGCCACTTCCTGGGTTCAAGCAATTCTCCTGCCTGTAGCACAGTTAATTaGGACTTTTCATCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: VVSAHCNCHFLGSSNSPACSTVN*DFSSSV
Trigger: AACAGAGGATGAAAAGTCCAAATTAACTGTGCTACA...GGCAGGAGAATTGCTTGAACCCAGGAAGTGGCAGTTGCAGTGAGCCGAGACGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTGTCCTCAGCTCCTCTTaGAACAAGGTAAGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTVLSSS*NKVSLL
Trigger: CAGCAGGCTTACCTTGTTCAAAGAGGAGCTGAGGAC...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTCACCTGCCGCCCGGCTaGGCTTCGCTCAGGGTCACT +
Preference number: 5 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIHLPPG*ASLRVT
Trigger: AGTGACCCTGAGCGAAGCCAAGCCGGGCGGCAGGTG...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS-3UTR CAA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACTTCCTGCCGCCCGGCTaGGCTTCGCTCAGGGTCACT +
Preference number: 5 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHFLPPG*ASLRVT
Trigger: AGTGACCCTGAGCGAAGCCAAGCCGGGCGGCAGGAA...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378757.6
CDS TCA 90 bp TTCTCTGTCCAGGCCGAAAGCTCCTCAAATCTCCCTTTCATGGCTTaGTTATTTAGCTTCATGGCTTCTTTCAGCTGGTGGTTCTCGGTC +
Preference number: 5 (lower is better)
Translates to: FSVQAESSSNLPFMA*LFSFMASFSWWFSV
Trigger: GACCGAGAACCACCAGCTGAAAGAAGCCATGAAGCTAAATAATCAAGCCATGAAAGGGAGATTTGAGGAGCTTTCGGCCTGGACAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000378764.6
CDS-3UTR CAA 90 bp AAACTGGCGTTCTTCCTTCTGTTTCTCTGTCCAGGCCGAAAGCTCCTCAAATCTGGCCCAGGACTATGCTaGATTTCTTTTACTGACCCT +
Preference number: 5 (lower is better)
Translates to: KLAFFLLFLCPGRKLLKSGPGLC*ISFTDP
Trigger: AGGGTCAGTAAAAGAAATCAAGCATAGTCCTGGGCC...AGATTTGAGGAGCTTTCGGCCTGGACAGAGAAACAGAAGGAAGAACGCCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR CAA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACACTTCATTTCATCCATTaGCAGCTGTTTGGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: CHMLANCMSSAAARINQTLHFIH*QLFGSQ
Trigger: CTGGCTTCCAAACAGCTGCAAATGGATGAAATGAAG...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCGTCCTCAGCTCCTCTTaGAACAAGGTAAGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLVLSSS*NKVSLL
Trigger: CAGCAGGCTTACCTTGTTCAAAGAGGAGCTGAGGAC...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS TCA 90 bp ATTGCAGAAGTTCTATGTGCGGACTCAGCACACCAGGCCTGTCACTaGCTAATCTTCATTAATGCTGAACCAGGCAGCTGTTTCAAAGGT +
Preference number: 5 (lower is better)
Translates to: IAEVLCADSAHQACH*LIFINAEPGSCFKG
Trigger: ACCTTTGAAACAGCTGCCTGGTTCAGCATTAATGAAGATTAGTCAGTGACAGGCCTGGTGTGCTGAGTCCGCACATAGAACTTCTGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378764.6
CDS-3UTR CAA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCTCAAAGGTGAGGAAGTaGGGTTTACAGAGGCGTACG +
Preference number: 5 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLSKVRK*GLQRRT
Trigger: CGTACGCCTCTGTAAACCCAACTTCCTCACCTTTGA...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS-3UTR CAA 90 bp CTTCTGCAGGAGGTTCAGAGTGATGGAGTCACACACCAGGAAAGTGGACTTGATCCATTAGACGCTCTTTaGCTTCTTTGCTCTGTATCT +
Preference number: 5 (lower is better)
Translates to: LLQEVQSDGVTHQESGLDPLDAL*LLCSVS
Trigger: AGATACAGAGCAAAGAAGCAAAAGAGCGTCTAATGG...ATCAAGTCCACTTTCCTGGTGTGTGACTCCATCACTCTGAACCTCCTGCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR CAA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTGGCCCAGGACTATGCTaGATTTCTTTTACTGACCCT +
Preference number: 5 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTGPGLC*ISFTDP
Trigger: AGGGTCAGTAAAAGAAATCAAGCATAGTCCTGGGCC...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTCTTTCTTTGGCCTCCTaGAGTGCAACTTCAAGTCTC +
Preference number: 5 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTLSLAS*SATSSL
Trigger: GAGACTTGAAGTTGCACTCAAGGAGGCCAAAGAAAG...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTAGGTCCTCTTCCTGCTaGGCAATGGTTTGCTTCATT +
Preference number: 5 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTRSSSC*AMVCFI
Trigger: AATGAAGCAAACCATTGCCAAGCAGGAAGAGGACCT...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACCGGAATATTCCGCTGTaGCCGCCAGTCCCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHRNIPL*PPVPVL
Trigger: GAGGACAGGGACTGGCGGCAACAGCGGAATATTCCG...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp CCGAAAGCTCCTCAAATCTCCCTTTCATGGCTTGATTATTTAGCTTCATGGCTTCTCCCTCTAGTCCACTaGACCACATGGCTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: PKAPQISLSWLDYLASWLLPLVH*TTWLFQ
Trigger: CTGAAAGAGCCATGTGGTCAAGTGGACTAGAGGGAG...AAGCCATGAAGCTAAATAATCAAGCCATGAAAGGGAGATTTGAGGAGCTTTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430081.5
CDS-3UTR CAA 90 bp TTAACTCCTCATGTTCGAAGTAATTCTTGGCCCCATCTGCAGATCTGCTCCTATGGCCCAGGACTATGCTaGATTTCTTTTACTGACCCT +
Preference number: 5 (lower is better)
Translates to: LTPHVRSNSWPHLQICSYGPGLC*ISFTDP
Trigger: AGGGTCAGTAAAAGAAATCAAGCATAGTCCTGGGCC...ATAGGAGCAGATCTGCAGATGGGGCCAAGAATTACTTCGAACATGAGGAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS-3UTR CAA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCCTTTCTTTGGCCTCCTaGAGTGCAACTTCAAGTCTC +
Preference number: 5 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLLSLAS*SATSSL
Trigger: GAGACTTGAAGTTGCACTCAAGGAGGCCAAAGAAAG...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTTCTGAAACTCTTTCTTaGGCCTCCTTGAGTGCAACT +
Preference number: 5 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTSETLS*ASLSAT
Trigger: AGTTGCACTCAAGGAGGCCAAAGAAAGAGTTTCAGA...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACATTTTGTATGAGCCTCTaGAAGCTCCTTAAACAGAGA +
Preference number: 5 (lower is better)
Translates to: CHMLANCMSSAAARINQTFCMSL*KLLKQR
Trigger: TCTCTGTTTAAGGAGCTTCAAGAGGCTCATACAAAA...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTCTTCATTTCATCCATTaGCAGCTGTTTGGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTLHFIH*QLFGSQ
Trigger: CTGGCTTCCAAACAGCTGCAAATGGATGAAATGAAG...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTGGTAAGGATTCTACTTaGCGAGTTGATGGAACTCCA +
Preference number: 5 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTGKDST*RVDGTP
Trigger: TGGAGTTCCATCAACTCGCAAAGTAGAATCCTTACC...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS TCA 90 bp TTTTTGATTCTTCTATGTGCGGACTCAGCACACCAGGCCTGTCACTaGCTAATCTTCATTAATGCTGAACCAGGCAGCTGTTTCAAAGGT +
Preference number: 5 (lower is better)
Translates to: FLILLCADSAHQACH*LIFINAEPGSCFKG
Trigger: ACCTTTGAAACAGCTGCCTGGTTCAGCATTAATGAAGATTAGTCAGTGACAGGCCTGGTGTGCTGAGTCCGCACATAGAAGAATCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378748.7
ENST00000378752.7
CDS TCA 90 bp AAGTGGCCAAATCAGCATTTGAACCAGACAGAAGACCATTTCCCATaGACTTTTCCATATTCAATCCATGTCCCATGTGTGGTCACCAGC +
Preference number: 5 (lower is better)
Translates to: KWPNQHLNQTEDHFP*TFPYSIHVPCVVTS
Trigger: GCTGGTGACCACACATGGGACATGGATTGAATATGGAAAAGTTCATGGGAAATGGTCTTCTGTCTGGTTCAAATGCTGATTTGGCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469025.1
CDS-3UTR CAA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCTCTGAAACTCTTTCTTaGGCCTCCTTGAGTGCAACT +
Preference number: 5 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLSETLS*ASLSAT
Trigger: AGTTGCACTCAAGGAGGCCAAAGAAAGAGTTTCAGA...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACATTAGCCTGTTCCATTTaGATTTCTGATAGCATGCTT +
Preference number: 5 (lower is better)
Translates to: CHMLANCMSSAAARINQTLACSI*ISDSML
Trigger: AAGCATGCTATCAGAAATCAAAATGGAACAGGCTAA...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTGCTGGTCAGAGTCACTaGTTCTCGCCCCATGACGAC +
Preference number: 5 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIAGQSH*FSPHDD
Trigger: GTCGTCATGGGGCGAGAACAAGTGACTCTGACCAGC...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp TGTCACATGCTAGCTAACTGCATGAGCAGTGCAGCTGCTCGCATCAACCAAACAACATTTTGGACATTTTaGATTCTTCTATGTGCGGAC +
Preference number: 5 (lower is better)
Translates to: CHMLANCMSSAAARINQTTFWTF*ILLCAD
Trigger: GTCCGCACATAGAAGAATCAAAAATGTCCAAAATGT...TGTTTGGTTGATGCGAGCAGCTGCACTGCTCATGCAGTTAGCTAGCATGTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378748.7
ENST00000378752.7
CDS-3UTR CAA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCGAAGTTCTCCAAAAGTaGCCCACTTTCTCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLEVLQK*PTFSPV
Trigger: AACTGGAGAGAAAGTGGGCAACTTTTGGAGAACTTC...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378752.7
CDS-3UTR CAA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACGAGGCAGCTGAGAGGTaGATGGGACATTGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHEAAER*MGHCRS
Trigger: ACTTCTGCAATGTCCCATCAACCTCTCAGCTGCCTC...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp CATAGGAAATCGTTTTGTAGAATACTGATAGAAATACATCTTGCAGCTGGGCGCCTTTCTTTGGCCTCCTaGAGTGCAACTTCAAGTCTC +
Preference number: 5 (lower is better)
Translates to: HRKSFCRILIEIHLAAGRLSLAS*SATSSL
Trigger: GAGACTTGAAGTTGCACTCAAGGAGGCCAAAGAAAG...GCGCCCAGCTGCAAGATGTATTTCTATCAGTATTCTACAAAACGATTTCCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424614.1
CDS-3UTR CAA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACTCAAAGGTGAGGAAGTaGGGTTTACAGAGGCGTACG +
Preference number: 5 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHSKVRK*GLQRRT
Trigger: CGTACGCCTCTGTAAACCCAACTTCCTCACCTTTGA...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS-3UTR CAA 90 bp CATAGGAAATCGTTTTGTAGAATACTGATAGAAATACATCTTGCAGCTGGGCGCTCTGAAACTCTTTCTTaGGCCTCCTTGAGTGCAACT +
Preference number: 5 (lower is better)
Translates to: HRKSFCRILIEIHLAAGRSETLS*ASLSAT
Trigger: AGTTGCACTCAAGGAGGCCAAAGAAAGAGTTTCAGA...GCGCCCAGCTGCAAGATGTATTTCTATCAGTATTCTACAAAACGATTTCCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424614.1
CDS-3UTR CAA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCTTTTGTATGAGCCTCTaGAAGCTCCTTAAACAGAGA +
Preference number: 5 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLFCMSL*KLLKQR
Trigger: TCTCTGTTTAAGGAGCTTCAAGAGGCTCATACAAAA...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp TCACACAGCACATACTGGGCTCCAGTAAAGGGATCTGCTCATATCCATAGAACTTTAGCCTGTTCCATTTaGATTTCTGATAGCATGCTT +
Preference number: 5 (lower is better)
Translates to: SHSTYWAPVKGSAHIHRTLACSI*ISDSML
Trigger: AAGCATGCTATCAGAAATCAAAATGGAACAGGCTAA...AGTTCTATGGATATGAGCAGATCCCTTTACTGGAGCCCAGTATGTGCTGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCGTCCTCAGCTCCTCTTaGAACAAGGTAAGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIVLSSS*NKVSLL
Trigger: CAGCAGGCTTACCTTGTTCAAAGAGGAGCTGAGGAC...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTGTCCTCAGCTCCTCTTaGAACAAGGTAAGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIVLSSS*NKVSLL
Trigger: CAGCAGGCTTACCTTGTTCAAAGAGGAGCTGAGGAC...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS TCA 90 bp GACATTTACCAACAGTTTTGGGGAGGTGATACATCAACACTTAAATaGTGCAATCCATCACGTGAATCTGTAACGTGTCTATGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: DIYQQFWGGDTSTLK*CNPSRESVTCLCQA
Trigger: TGCCTGACATAGACACGTTACAGATTCACGTGATGGATTGCATCATTTAAGTGTTGATGTATCACCTCCCCAAAACTGTTGGTAAATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000378764.6
ENST00000469025.1
CDS-3UTR CAA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTTCAAAGGTGAGGAAGTaGGGTTTACAGAGGCGTACG +
Preference number: 5 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQISKVRK*GLQRRT
Trigger: CGTACGCCTCTGTAAACCCAACTTCCTCACCTTTGA...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS-3UTR CAA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCGAGGTTGATGGGACATaGCAGAAGTTCTATGTGCGG +
Preference number: 5 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIEVDGT*QKFYVR
Trigger: CCGCACATAGAACTTCTGCAATGTCCCATCAACCTC...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378747.8
CDS-3UTR CAA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACGGCCCAGGACTATGCTaGATTTCTTTTACTGACCCT +
Preference number: 5 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHGPGLC*ISFTDP
Trigger: AGGGTCAGTAAAAGAAATCAAGCATAGTCCTGGGCC...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp AGACATAGGAAATCGTTTTGTAGAATACTGATAGAAATACATCTTGCAGCTGGGGGCCCAGGACTATGCTaGATTTCTTTTACTGACCCT +
Preference number: 5 (lower is better)
Translates to: RHRKSFCRILIEIHLAAGGPGLC*ISFTDP
Trigger: AGGGTCAGTAAAAGAAATCAAGCATAGTCCTGGGCC...CCCAGCTGCAAGATGTATTTCTATCAGTATTCTACAAAACGATTTCCTATGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424614.1
CDS-3UTR CAA 90 bp GTTGATGGAACTCCACCAAAGGTGTTCTACGTAGAACAGGTACCTTTTCTTCTCTGTAGCACAGTTAATTaGGACTTTTCATCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: VDGTPPKVFYVEQVPFLLCSTVN*DFSSSV
Trigger: AACAGAGGATGAAAAGTCCAAATTAACTGTGCTACA...GAGAAGAAAAGGTACCTGTTCTACGTAGAACACCTTTGGTGGAGTTCCATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCCTTTCTTTGGCCTCCTaGAGTGCAACTTCAAGTCTC +
Preference number: 5 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQILSLAS*SATSSL
Trigger: GAGACTTGAAGTTGCACTCAAGGAGGCCAAAGAAAG...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACTCTGAAACTCTTTCTTaGGCCTCCTTGAGTGCAACT +
Preference number: 5 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHSETLS*ASLSAT
Trigger: AGTTGCACTCAAGGAGGCCAAAGAAAGAGTTTCAGA...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTAGGTCCTCTTCCTGCTaGGCAATGGTTTGCTTCATT +
Preference number: 5 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIRSSSC*AMVCFI
Trigger: AATGAAGCAAACCATTGCCAAGCAGGAAGAGGACCT...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACAAGTCACTCCAAAAGTaGCCCACTTTCTCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHKSLQK*PTFSPV
Trigger: AACTGGAGAGAAAGTGGGCAACTTTTGGAGTGACTT...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378748.7
CDS-3UTR CAA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACGAGGTTGATGGGACATaGCAGAAGTTCTCCAAAAGT +
Preference number: 5 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHEVDGT*QKFSKS
Trigger: ACTTTTGGAGAACTTCTGCAATGTCCCATCAACCTC...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378752.7
CDS-3UTR CAA 90 bp AACCCAAATCTTTCAATTCTCCCTCAAGTTTCTAAGTCATATCCTCAAATGATCTTTCCTACAGTAGGCTaGTTCATTGAAGGACCGAGG +
Preference number: 5 (lower is better)
Translates to: NPNLSILPQVSKSYPQMIFPTVG*FIEGPR
Trigger: CCTCGGTCCTTCAATGAACAAGCCTACTGTAGGAAA...GATCATTTGAGGATATGACTTAGAAACTTGAGGGAGAATTGAAAGATTTGGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424614.1
CDS-3UTR CAA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACCCATTAGACGCTCTTTaGCTTCTTTGCTCTGTATCT +
Preference number: 5 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHPLDAL*LLCSVS
Trigger: AGATACAGAGCAAAGAAGCAAAAGAGCGTCTAATGG...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCTCTGAAACTCTTTCTTaGGCCTCCTTGAGTGCAACT +
Preference number: 5 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQISETLS*ASLSAT
Trigger: AGTTGCACTCAAGGAGGCCAAAGAAAGAGTTTCAGA...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCCTTCATTTCATCCATTaGCAGCTGTTTGGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQILHFIH*QLFGSQ
Trigger: CTGGCTTCCAAACAGCTGCAAATGGATGAAATGAAG...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTCCATTAGACGCTCTTTaGCTTCTTTGCTCTGTATCT +
Preference number: 5 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQIPLDAL*LLCSVS
Trigger: AGATACAGAGCAAAGAAGCAAAAGAGCGTCTAATGG...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCCCATTAGACGCTCTTTaGCTTCTTTGCTCTGTATCT +
Preference number: 5 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQIPLDAL*LLCSVS
Trigger: AGATACAGAGCAAAGAAGCAAAAGAGCGTCTAATGG...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACTTTTGTATGAGCCTCTaGAAGCTCCTTAAACAGAGA +
Preference number: 5 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHFCMSL*KLLKQR
Trigger: TCTCTGTTTAAGGAGCTTCAAGAGGCTCATACAAAA...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp TTACTCTTGGCAAATTGTAGACTTACAAAACAAGGCAAATCCCTACCTATTCACACATTTTGGACATTTTaGATTCTTCTATGTGCGGAC +
Preference number: 5 (lower is better)
Translates to: LLLANCRLTKQGKSLPIHTFWTF*ILLCAD
Trigger: GTCCGCACATAGAAGAATCAAAAATGTCCAAAATGT...GTGAATAGGTAGGGATTTGCCTTGTTTTGTAAGTCTACAATTTGCCAAGAGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378748.7
ENST00000378752.7
CDS-3UTR CAA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCTTAGCCTGTTCCATTTaGATTTCTGATAGCATGCTT +
Preference number: 5 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQILACSI*ISDSML
Trigger: AAGCATGCTATCAGAAATCAAAATGGAACAGGCTAA...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp AATTATTGTGGCTGCAATAAAACTACAACATACACACATAACCTCCAACAGATCTGTAGCACAGTTAATTaGGACTTTTCATCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: NYCGCNKTTTYTHNLQQICSTVN*DFSSSV
Trigger: AACAGAGGATGAAAAGTCCAAATTAACTGTGCTACA...GATCTGTTGGAGGTTATGTGTGTATGTTGTAGTTTTATTGCAGCCACAATAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS-3UTR CAA 90 bp AAACACACTGTTTACTTTTACAGCTGGTCCAGTGTTATTTACTCTTGGCAAATTTGTAGCACAGTTAATTaGGACTTTTCATCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: KHTVYFYSWSSVIYSWQICSTVN*DFSSSV
Trigger: AACAGAGGATGAAAAGTCCAAATTAACTGTGCTACA...AATTTGCCAAGAGTAAATAACACTGGACCAGCTGTAAAAGTAAACAGTGTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
CDS CCA 72 bp GGCATCGTGCCGCCTGGAGAGAACTCCCGACCGGGATaGGACGCTGACCAGGGAACCTGCCGGCGGGCGGCG +
Preference number: 6 (lower is better)
Translates to: GIVPPGENSRPG*DADQGTCRRAA
Trigger: CGCCGCCCGCCGGCAGGTTCCCTGGTCAGCGTCCCATCCCGGTCGGGAGTTCTCTCCAGGCGGCACGATGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000430081.5
ENST00000482140.5
ENST00000487935.1
CDS TCA 72 bp CTCGCTGTCCGTGCGGGGTCGAGGCTGGGACCCGGGTaGACAGGGACTGCTCTAAGGCGTCACTGTGACGGC +
Preference number: 6 (lower is better)
Translates to: LAVRAGSRLGPG*TGTALRRHCDG
Trigger: GCCGTCACAGTGACGCCTTAGAGCAGTCCCTGTTCACCCGGGTCCCAGCCTCGACCCCGCACGGACAGCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263036.9
ENST00000378764.6
CDS CCA 72 bp TTCCCCGTGTCTTCCCGCAGATCCCGTAGTGGAGGCTaGAGCCGCAGGGGGTCGCTGCCGCCCACAGAAAGA +
Preference number: 6 (lower is better)
Translates to: FPVSSRRSRSGG*SRRGSLPPTER
Trigger: TCTTTCTGTGGGCGGCAGCGACCCCCTGCGGCTCCAGCCTCCACTACGGGATCTGCGGGAAGACACGGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263036.9
ENST00000378764.6
CDS GCA 72 bp CGCAGGGGGTCGCTGCCGCCCACAGAAAGAGGAGAATaGCAGGCATCCTCGGAGGGAGGCCTCCATCTGTGT +
Preference number: 6 (lower is better)
Translates to: RRGSLPPTERGE*QASSEGGLHLC
Trigger: ACACAGATGGAGGCCTCCCTCCGAGGATGCCTGGCATTCTCCTCTTTCTGTGGGCGGCAGCGACCCCCTGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263036.9
ENST00000378764.6
CDS GCA 72 bp GATCCCGTAGTGGAGGCTGGAGCCGCAGGGGGTCGCTaGCGCCCACAGAAAGAGGAGAATGCCAGGCATCCT +
Preference number: 6 (lower is better)
Translates to: DPVVEAGAAGGR*RPQKEENARHP
Trigger: AGGATGCCTGGCATTCTCCTCTTTCTGTGGGCGGCAGCGACCCCCTGCGGCTCCAGCCTCCACTACGGGATC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263036.9
ENST00000378764.6
CDS GCA 72 bp TTGGCTTCGCTCAGGGTCACTGTTTCCTCGGCATCGTaGCGCCTGGAGAGAACTCCCGACCGGGATGGGACG +
Preference number: 6 (lower is better)
Translates to: LASLRVTVSSAS*RLERTPDRDGT
Trigger: CGTCCCATCCCGGTCGGGAGTTCTCTCCAGGCGGCACGATGCCGAGGAAACAGTGACCCTGAGCGAAGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000430081.5
ENST00000482140.5
ENST00000487935.1
CDS CCA 72 bp GGTCCTTTTCCTGCTCCGCTTCGGCCCTGGGAAGCCTaGAGTCATCAGTGGGGTCCTTTCAGCTGGTGGTTC +
Preference number: 6 (lower is better)
Translates to: GPFPAPLRPWEA*SHQWGPFSWWF
Trigger: GAACCACCAGCTGAAAGGACCCCACTGATGACTCCAGGCTTCCCAGGGCCGAAGCGGAGCAGGAAAAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482140.5
CDS CCA 72 bp TTTACAGAGGCGTACGGCTCATCCAAGGCCAGGAAGTaGCACCACCAGCTATCAAAGCCACACCTGCCGCCC +
Preference number: 6 (lower is better)
Translates to: FTEAYGSSKARK*HHQLSKPHLPP
Trigger: GGGCGGCAGGTGTGGCTTTGATAGCTGGTGGTGCCACTTCCTGGCCTTGGATGAGCCGTACGCCTCTGTAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
CDS CAA 72 bp GGGGCTGTCCTCCTTTTCAGTGAGGCAGCTGAGAGGTaGATGGGACATTGCAGAAGTTCCTGCCGCCCGGCT +
Preference number: 6 (lower is better)
Translates to: GAVLLFSEAAER*MGHCRSSCRPA
Trigger: AGCCGGGCGGCAGGAACTTCTGCAATGTCCCATCAACCTCTCAGCTGCCTCACTGAAAAGGAGGACAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378757.6
ENST00000430081.5
ENST00000482140.5
ENST00000487935.1
CDS CAA 90 bp GCTTTCACTGGGGCTGTCCTCCTTTTCAGTGAGGCAGCTGAGAGGTaGATGGGACATTGCAGAAGTTCCTGCCGCCCGGCTTGGCTTCGC +
Preference number: 6 (lower is better)
Translates to: AFTGAVLLFSEAAER*MGHCRSSCRPAWLR
Trigger: GCGAAGCCAAGCCGGGCGGCAGGAACTTCTGCAATGTCCCATCAACCTCTCAGCTGCCTCACTGAAAAGGAGGACAGCCCCAGTGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378757.6
ENST00000430081.5
ENST00000482140.5
ENST00000487935.1
CDS TCA 72 bp GGGCTGTCCTCCTTTTCAGTGAGGCAGCTGAGAGGTTaGTGGGACATTGCAGAAGTTCCTGCCGCCCGGCTT +
Preference number: 6 (lower is better)
Translates to: GLSSFSVRQLRG*WDIAEVPAARL
Trigger: AAGCCGGGCGGCAGGAACTTCTGCAATGTCCCATCAACCTCTCAGCTGCCTCACTGAAAAGGAGGACAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378757.6
ENST00000430081.5
ENST00000482140.5
ENST00000487935.1
CDS GCA 72 bp TTCAGCTGGTGGTTCTCGGTCAGGAGCTCTTTCATCTaGTGCAGCAGCTCCTCCGGGGTAAACGTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: FSWWFSVRSSFI*CSSSSGVNVSR
Trigger: CCTGGACACGTTTACCCCGGAGGAGCTGCTGCAGCAGATGAAAGAGCTCCTGACCGAGAACCACCAGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000378764.6
ENST00000430081.5
ENST00000482140.5
ENST00000487935.1
CDS GCA 72 bp AGCTGGTGGTTCTCGGTCAGGAGCTCTTTCATCTGCTaGAGCAGCTCCTCCGGGGTAAACGTGTCCAGGTTT +
Preference number: 6 (lower is better)
Translates to: SWWFSVRSSFIC*SSSSGVNVSRF
Trigger: AAACCTGGACACGTTTACCCCGGAGGAGCTGCTGCAGCAGATGAAAGAGCTCCTGACCGAGAACCACCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000378764.6
ENST00000430081.5
ENST00000482140.5
ENST00000487935.1
CDS GCA 72 bp TGTCTGCCTGACAGCCCGAGTCTTCCTTCACATACGTaGCAGTGGAGACTGTTCTCGTGGGCCCAGGACTAT +
Preference number: 6 (lower is better)
Translates to: CLPDSPSLPSHT*QWRLFSWAQDY
Trigger: ATAGTCCTGGGCCCACGAGAACAGTCTCCACTGGCACGTATGTGAAGGAAGACTCGGGCTGTCAGGCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486862.1
CDS CCA 72 bp TTTACAGAGGCGTACGGCTCATCCAAGGCCAGGAAGTaGCACCACCAGCTATCAAAGCCACACCCTCGCTGT +
Preference number: 6 (lower is better)
Translates to: FTEAYGSSKARK*HHQLSKPHPRC
Trigger: ACAGCGAGGGTGTGGCTTTGATAGCTGGTGGTGCCACTTCCTGGCCTTGGATGAGCCGTACGCCTCTGTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263036.9
ENST00000378764.6
CDS TCA 72 bp ATGTCAGGCAGAACCTCTCCACACTTGGGGCAGGAATaGATCGGAATATTCCGCTGTTGCCGCCAGTCCCTG +
Preference number: 6 (lower is better)
Translates to: MSGRTSPHLGQE*IGIFRCCRQSL
Trigger: CAGGGACTGGCGGCAACAGCGGAATATTCCGATTCATTCCTGCCCCAAGTGTGGAGAGGTTCTGCCTGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000378764.6
ENST00000469025.1
CDS CAA 90 bp CCTCAGCTCCTCTTTGAACAAGGTAAGCCTGCTGGTCAGAGTCACTaGTTCTCGCCCCATGACGACTCTGCATCTCCATCAAGGACTGCC +
Preference number: 6 (lower is better)
Translates to: PQLLFEQGKPAGQSH*FSPHDDSASPSRTA
Trigger: GGCAGTCCTTGATGGAGATGCAGAGTCGTCATGGGGCGAGAACAAGTGACTCTGACCAGCAGGCTTACCTTGTTCAAAGAGGAGCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000378764.6
ENST00000469025.1
CDS CAA 72 bp GGGGCTGTCCTCCTTTTCAGTGAGGCAGCTGAGAGGTaGATGGGACATTGCAGAAGTTCTATGTGCGGACTC +
Preference number: 6 (lower is better)
Translates to: GAVLLFSEAAER*MGHCRSSMCGL
Trigger: GAGTCCGCACATAGAACTTCTGCAATGTCCCATCAACCTCTCAGCTGCCTCACTGAAAAGGAGGACAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378764.6
CDS CAA 72 bp ACACTTGGGGCAGGAATGAATCGGAATATTCCGCTGTaGCCGCCAGTCCCTGTCCTCAGCTCCTCTTTGAAC +
Preference number: 6 (lower is better)
Translates to: TLGAGMNRNIPL*PPVPVLSSSLN
Trigger: GTTCAAAGAGGAGCTGAGGACAGGGACTGGCGGCAACAGCGGAATATTCCGATTCATTCCTGCCCCAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000378764.6
ENST00000469025.1
CDS CAA 90 bp GCTTTCACTGGGGCTGTCCTCCTTTTCAGTGAGGCAGCTGAGAGGTaGATGGGACATTGCAGAAGTTCTATGTGCGGACTCAGCACACCA +
Preference number: 6 (lower is better)
Translates to: AFTGAVLLFSEAAER*MGHCRSSMCGLSTP
Trigger: TGGTGTGCTGAGTCCGCACATAGAACTTCTGCAATGTCCCATCAACCTCTCAGCTGCCTCACTGAAAAGGAGGACAGCCCCAGTGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378764.6
CDS CAA 90 bp AACCTCTCCACACTTGGGGCAGGAATGAATCGGAATATTCCGCTGTaGCCGCCAGTCCCTGTCCTCAGCTCCTCTTTGAACAAGGTAAGC +
Preference number: 6 (lower is better)
Translates to: NLSTLGAGMNRNIPL*PPVPVLSSSLNKVS
Trigger: GCTTACCTTGTTCAAAGAGGAGCTGAGGACAGGGACTGGCGGCAACAGCGGAATATTCCGATTCATTCCTGCCCCAAGTGTGGAGAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000378764.6
ENST00000469025.1
CDS TCA 72 bp GGGCTGTCCTCCTTTTCAGTGAGGCAGCTGAGAGGTTaGTGGGACATTGCAGAAGTTCTATGTGCGGACTCA +
Preference number: 6 (lower is better)
Translates to: GLSSFSVRQLRG*WDIAEVLCADS
Trigger: TGAGTCCGCACATAGAACTTCTGCAATGTCCCATCAACCTCTCAGCTGCCTCACTGAAAAGGAGGACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378764.6
CDS TCA 72 bp GGGCTGTCCTCCTTTTCAGTGAGGCAGCTGAGAGGTTaGTGGGACATTGCAGAAGTTCTCCAAAAGTTGCCC +
Preference number: 6 (lower is better)
Translates to: GLSSFSVRQLRG*WDIAEVLQKLP
Trigger: GGGCAACTTTTGGAGAACTTCTGCAATGTCCCATCAACCTCTCAGCTGCCTCACTGAAAAGGAGGACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378752.7
CDS CAA 72 bp ATGCTGAACCAGGCAGCTGTTTCAAAGGTGAGGAAGTaGGGTTTACAGAGGCGTACGGCTCATCCAAGGCCA +
Preference number: 6 (lower is better)
Translates to: MLNQAAVSKVRK*GLQRRTAHPRP
Trigger: TGGCCTTGGATGAGCCGTACGCCTCTGTAAACCCAACTTCCTCACCTTTGAAACAGCTGCCTGGTTCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378764.6
CDS CAA 90 bp CTGCTCGTGCCAGTGGAGACTGTTCTCGTGGGCCCAGGACTATGCTaGATTTCTTTTACTGACCCTTCTGCTTCTCCTTCAGCCATCCTA +
Preference number: 6 (lower is better)
Translates to: LLVPVETVLVGPGLC*ISFTDPSASPSAIL
Trigger: TAGGATGGCTGAAGGAGAAGCAGAAGGGTCAGTAAAAGAAATCAAGCATAGTCCTGGGCCCACGAGAACAGTCTCCACTGGCACGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378752.7
ENST00000378764.6
CDS CAA 90 bp TCTTCATTAATGCTGAACCAGGCAGCTGTTTCAAAGGTGAGGAAGTaGGGTTTACAGAGGCGTACGGCTCATCCAAGGCCAGGAAGTGGC +
Preference number: 6 (lower is better)
Translates to: SSLMLNQAAVSKVRK*GLQRRTAHPRPGSG
Trigger: GCCACTTCCTGGCCTTGGATGAGCCGTACGCCTCTGTAAACCCAACTTCCTCACCTTTGAAACAGCTGCCTGGTTCAGCATTAATGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378764.6
CDS TCA 72 bp GGGCTGTCCTCCTTTTCAGTGAGGCAGCTGAGAGGTTaGTGGGACATTGCAGAAGTTCCTGTGGAAAAGTCA +
Preference number: 6 (lower is better)
Translates to: GLSSFSVRQLRG*WDIAEVPVEKS
Trigger: TGACTTTTCCACAGGAACTTCTGCAATGTCCCATCAACCTCTCAGCTGCCTCACTGAAAAGGAGGACAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378748.7
CDS CCA 72 bp GTAACGTGTCTATGTCAGGCAGAACCTCTCCACACTTaGGGCAGGAATGAATCGGAATATTCCGCTGTTGCC +
Preference number: 6 (lower is better)
Translates to: VTCLCQAEPLHT*GRNESEYSAVA
Trigger: GGCAACAGCGGAATATTCCGATTCATTCCTGCCCCAAGTGTGGAGAGGTTCTGCCTGACATAGACACGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000378764.6
ENST00000469025.1
CDS CCA 72 bp GGCTCACAGTTAACTCCTCATGTTCGAAGTAATTCTTaGCCCCATCTGCAGATCTGCTCGTGCCAGTGGAGA +
Preference number: 6 (lower is better)
Translates to: GSQLTPHVRSNS*PHLQICSCQWR
Trigger: TCTCCACTGGCACGAGCAGATCTGCAGATGGGGCCAAGAATTACTTCGAACATGAGGAGTTAACTGTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378752.7
ENST00000378764.6
CDS CAA 72 bp CTCTTTGAACAAGGTAAGCCTGCTGGTCAGAGTCACTaGTTCTCGCCCCATGACGACTCTGCATCTCCATCA +
Preference number: 6 (lower is better)
Translates to: LFEQGKPAGQSH*FSPHDDSASPS
Trigger: TGATGGAGATGCAGAGTCGTCATGGGGCGAGAACAAGTGACTCTGACCAGCAGGCTTACCTTGTTCAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000378764.6
ENST00000469025.1
CDS CAA 90 bp ACATACGTGCCAGTGGAGACTGTTCTCGTGGGCCCAGGACTATGCTaGATTTCTTTTACTGACCCTTCTGCTTCTCCTTCAGCCATCCTA +
Preference number: 6 (lower is better)
Translates to: TYVPVETVLVGPGLC*ISFTDPSASPSAIL
Trigger: TAGGATGGCTGAAGGAGAAGCAGAAGGGTCAGTAAAAGAAATCAAGCATAGTCCTGGGCCCACGAGAACAGTCTCCACTGGCACGTATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486862.1
CDS TCA 72 bp GTTCTATGTGCGGACTCAGCACACCAGGCCTGTCACTaGCTAATCTTCATTAATGCTGAACCAGGCAGCTGT +
Preference number: 6 (lower is better)
Translates to: VLCADSAHQACH*LIFINAEPGSC
Trigger: ACAGCTGCCTGGTTCAGCATTAATGAAGATTAGTCAGTGACAGGCCTGGTGTGCTGAGTCCGCACATAGAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378764.6
CDS TCA 72 bp CTTCTATGTGCGGACTCAGCACACCAGGCCTGTCACTaGCTAATCTTCATTAATGCTGAACCAGGCAGCTGT +
Preference number: 6 (lower is better)
Translates to: LLCADSAHQACH*LIFINAEPGSC
Trigger: ACAGCTGCCTGGTTCAGCATTAATGAAGATTAGTCAGTGACAGGCCTGGTGTGCTGAGTCCGCACATAGAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378748.7
ENST00000378752.7
CDS GCA 72 bp GCCCTGAGGATGGTCATGGTTTCCAGGTCCTCTTCCTaGTTGGCAATGGTTTGCTTCATTTCATCCATTTGC +
Preference number: 6 (lower is better)
Translates to: ALRMVMVSRSSS*LAMVCFISSIC
Trigger: GCAAATGGATGAAATGAAGCAAACCATTGCCAAGCAGGAAGAGGACCTGGAAACCATGACCATCCTCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000378764.6
CDS CCA 72 bp CAGCCTCCTAAGATGGCTCCAGTGATCCTTGCCTCTTaGTATTCATCACCTTGTATGTTTCCCTCCCACAAT +
Preference number: 6 (lower is better)
Translates to: QPPKMAPVILAS*YSSPCMFPSHN
Trigger: ATTGTGGGAGGGAAACATACAAGGTGATGAATACCAAGAGGCAAGGATCACTGGAGCCATCTTAGGAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469025.1
CDS CAA 72 bp ATACACTCAAAAAGCAGAAAGCCTGCAGGATGCTTCTaGGGCTCTTGTTGCGGACGAATAGGCTCGGCTATT +
Preference number: 6 (lower is better)
Translates to: IHSKSRKPAGCF*GSCCGRIGSAI
Trigger: AATAGCCGAGCCTATTCGTCCGCAACAAGAGCCCAAGAAGCATCCTGCAGGCTTTCTGCTTTTTGAGTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263036.9
CDS TCA 72 bp CAGGCCGAAAGCTCCTCAAATCTCCCTTTCATGGCTTaGTTATTTAGCTTCATGGCTTCTTTCAGCTGGTGG +
Preference number: 6 (lower is better)
Translates to: QAESSSNLPFMA*LFSFMASFSWW
Trigger: CCACCAGCTGAAAGAAGCCATGAAGCTAAATAATCAAGCCATGAAAGGGAGATTTGAGGAGCTTTCGGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000378764.6
CDS CAA 90 bp TGCTTTAAAATACACTCAAAAAGCAGAAAGCCTGCAGGATGCTTCTaGGGCTCTTGTTGCGGACGAATAGGCTCGGCTATTCTTGTTGCT +
Preference number: 6 (lower is better)
Translates to: CFKIHSKSRKPAGCF*GSCCGRIGSAILVA
Trigger: AGCAACAAGAATAGCCGAGCCTATTCGTCCGCAACAAGAGCCCAAGAAGCATCCTGCAGGCTTTCTGCTTTTTGAGTGTATTTTAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263036.9
CDS GCA 72 bp TTTAAAATACACTCAAAAAGCAGAAAGCCTGCAGGATaGTTCTTGGGCTCTTGTTGCGGACGAATAGGCTCG +
Preference number: 6 (lower is better)
Translates to: FKIHSKSRKPAG*FLGSCCGRIGS
Trigger: CGAGCCTATTCGTCCGCAACAAGAGCCCAAGAAGCATCCTGCAGGCTTTCTGCTTTTTGAGTGTATTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263036.9
CDS GCA 72 bp TGTGACGGCGTTAATCAAAATAAATCATTAATCAAATaGAGTGTGCGGAGTTCGTCTTCCCCGTGTCTTCCC +
Preference number: 6 (lower is better)
Translates to: CDGVNQNKSLIK*SVRSSSSPCLP
Trigger: GGGAAGACACGGGGAAGACGAACTCCGCACACTGCATTTGATTAATGATTTATTTTGATTAACGCCGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263036.9
ENST00000378764.6
CDS TCA 72 bp CAACAGTTTTGGGGAGGTGATACATCAACACTTAAATaGTGCAATCCATCACGTGAATCTGTAACGTGTCTA +
Preference number: 6 (lower is better)
Translates to: QQFWGGDTSTLK*CNPSRESVTCL
Trigger: TAGACACGTTACAGATTCACGTGATGGATTGCATCATTTAAGTGTTGATGTATCACCTCCCCAAAACTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000378764.6
ENST00000469025.1
CDS TCA 72 bp AATCAGCATTTGAACCAGACAGAAGACCATTTCCCATaGACTTTTCCATATTCAATCCATGTCCCATGTGTG +
Preference number: 6 (lower is better)
Translates to: NQHLNQTEDHFP*TFPYSIHVPCV
Trigger: CACACATGGGACATGGATTGAATATGGAAAAGTTCATGGGAAATGGTCTTCTGTCTGGTTCAAATGCTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469025.1
CDS CAA 72 bp AAACAAGCTCTTGCTTTTCATTCAACTCTGATGGAATaGCAGAATTTTTCCTTTCAAGGGCCTGACACTTTT +
Preference number: 6 (lower is better)
Translates to: KQALAFHSTLME*QNFSFQGPDTF
Trigger: AAAAGTGTCAGGCCCTTGAAAGGAAAAATTCTGCAATTCCATCAGAGTTGAATGAAAAGCAAGAGCTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263036.9
ENST00000378747.8
ENST00000378748.7
ENST00000378752.7
ENST00000378757.6
ENST00000378764.6
CDS CAA 72 bp CCTTTTGAATGGGCTAAATATCATTATGCTACTTCCTaGAGATACACACAGTTTTTACTTGTACCTTTCAGC +
Preference number: 6 (lower is better)
Translates to: PFEWAKYHYATS*RYTQFLLVPFS
Trigger: GCTGAAAGGTACAAGTAAAAACTGTGTGTATCTCAAGGAAGTAGCATAATGATATTTAGCCCATTCAAAAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487935.1