RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OPN4 (Homo sapiens)

Ensembl gene IDs: ENSG00000122375

Ensembl transcript IDs: ENST00000241891.10, ENST00000372071.6, ENST00000443292.1

Found 334 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAAAGGGAGGTCTGTGCTCGGCTTCAGCTGTTGGCAGTGGGAGATaGGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGGGG +
Preference number: 1 (lower is better)
Translates to: AKGGLCSASAVGSGR*GAGLPMPVTGPAWG
Trigger: CCCCCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAGCACAGACCTCCCTTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR CCA 90 bp CCAGCGTGCAAAGGGAGGTCTGTGCTCGGCTTCAGCTGTTGGCAGTaGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGC +
Preference number: 1 (lower is better)
Translates to: PACKGRSVLGFSCWQ*EMRGWPSYASDRPS
Trigger: GCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAGCACAGACCTCCCTTTGCACGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR CCA 90 bp GGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTaGGGGCAGAGGCTCATAAATAGCTGGTGTGTTCTCTGGAGCCAT +
Preference number: 1 (lower is better)
Translates to: GRCGAGLPMPVTGPA*GQRLINSWCVLWSH
Trigger: ATGGCTCCAGAGAACACACCAGCTATTTATGAGCCTCTGCCCCCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR TCA 90 bp ATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTaGGTAACTGTTCCAGCGTGCAAAGGGAGGTCTGTGCTCGGCTTC +
Preference number: 1 (lower is better)
Translates to: MWATVERYTGGRSHR*VTVPACKGRSVLGF
Trigger: GAAGCCGAGCACAGACCTCCCTTTGCACGCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR TCA 90 bp GCCATCACCATTGTCATCGCCTGGACAATTGCAGCACACAGCATTTaGGGAGAGGCAGACAACTCGGGAAGTGGGAGGGCCTGGGCACAT +
Preference number: 1 (lower is better)
Translates to: AITIVIAWTIAAHSI*GEADNSGSGRAWAH
Trigger: ATGTGCCCAGGCCCTCCCACTTCCCGAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAATGGTGATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR CCA 90 bp GGCCCAGCCTGGGGGCAGAGGCTCATAAATAGCTGGTGTGTTCTCTaGAGCCATCACCATTGTCATCGCCTGGACAATTGCAGCACACAG +
Preference number: 1 (lower is better)
Translates to: GPAWGQRLINSWCVL*SHHHCHRLDNCSTQ
Trigger: CTGTGTGCTGCAATTGTCCAGGCGATGACAATGGTGATGGCTCCAGAGAACACACCAGCTATTTATGAGCCTCTGCCCCCAGGCTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR CCA 90 bp AATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTaGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCGTGCAAAGG +
Preference number: 1 (lower is better)
Translates to: NARVHKNVGHSGTVH*GKKPQVSNCSSVQR
Trigger: CCTTTGCACGCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR GCA 90 bp ATTCAGATAGGTAACTACGCGAGAGCGTGCCTGCAAATGCCCGCGTaGACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGA +
Preference number: 1 (lower is better)
Translates to: IQIGNYARACLQMPA*TRMWATVERYTGGR
Trigger: TCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGTTACCTATCTGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR GCA 90 bp CGCATGTGCTTGGTGTGCATTCAGATAGGTAACTACGCGAGAGCGTaGCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAA +
Preference number: 1 (lower is better)
Translates to: RMCLVCIQIGNYARA*LQMPACTRMWATVE
Trigger: TTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGTTACCTATCTGAATGCACACCAAGCACATGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR TCA 90 bp TCAGATCCACACAGCCCTGGGAGGAGCTTAGACCACTACATGAAATaGATCACAGACGCAGAGTGTGCACGCATGTGCTTGGTGTGCATT +
Preference number: 1 (lower is better)
Translates to: SDPHSPGRSLDHYMK*ITDAECARMCLVCI
Trigger: AATGCACACCAAGCACATGCGTGCACACTCTGCGTCTGTGATTCATTTCATGTAGTGGTCTAAGCTCCTCCCAGGGCTGTGTGGATCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR CCA 90 bp TCTCCGCTTTTTATTTTCCTATACCCTGTCAGATCCACACAGCCCTaGGAGGAGCTTAGACCACTACATGAAATGAATCACAGACGCAGA +
Preference number: 1 (lower is better)
Translates to: SPLFIFLYPVRSTQP*EELRPLHEMNHRRR
Trigger: TCTGCGTCTGTGATTCATTTCATGTAGTGGTCTAAGCTCCTCCCAGGGCTGTGTGGATCTGACAGGGTATAGGAAAATAAAAAGCGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR TCA 90 bp GGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGGGGCAGACATACCCCTCAGGCTaGGCCTCGGGTGCGGCTGCT +
Preference number: 2 (lower is better)
Translates to: GRCGAGLPMPVTGPAWGQTYPSG*ASGAAA
Trigger: AGCAGCCGCACCCGAGGCTCAGCCTGAGGGGTATGT...CTGCCCCCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR CCA 90 bp GGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGGGGCAGGTGCGGCTGCTGAGCTaGAAAGTGGATGCGGAGGAC +
Preference number: 2 (lower is better)
Translates to: GRCGAGLPMPVTGPAWGQVRLLS*KVDAED
Trigger: GTCCTCCGCATCCACTTTCCAGCTCAGCAGCCGCAC...CTGCCCCCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR CCA 90 bp GGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGGGAAGTGGGAGGGCCTaGGCACATACCCCTCAGGCT +
Preference number: 2 (lower is better)
Translates to: GSGRCGAGLPMPVTGPAWGSGRA*AHTPQA
Trigger: AGCCTGAGGGGTATGTGCCCAGGCCCTCCCACTTCC...CCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR GCA 90 bp GGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGGGGCAGGAGCTGGAAAGTGGATaGGGAGGACGTTATGGGGCA +
Preference number: 2 (lower is better)
Translates to: GRCGAGLPMPVTGPAWGQELESG*GGRYGA
Trigger: TGCCCCATAACGTCCTCCGCATCCACTTTCCAGCTC...CTGCCCCCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR TCA 90 bp TACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGACATACCCCTCAGGCTaGGCCTCGGGTGCGGCTGCT +
Preference number: 2 (lower is better)
Translates to: YARACLQMPACTRMWATVTYPSG*ASGAAA
Trigger: AGCAGCCGCACCCGAGGCTCAGCCTGAGGGGTATGT...CACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR CCA 90 bp TACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGCTCGGCTTCAGCTGTTaGCAGTGGGAGATGCGGGGC +
Preference number: 2 (lower is better)
Translates to: YARACLQMPACTRMWATVLGFSC*QWEMRG
Trigger: GCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAG...CACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR TCA 90 bp GCTCGGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGGCAGCACACAGCATTTaGGGAGAGGCAGACAACTCG +
Preference number: 2 (lower is better)
Translates to: ARLQLLAVGDAGLAFLCQAAHSI*GEADNS
Trigger: CGAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGC...CTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR GCA 90 bp TACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGTTGGCAGTGGGAGATaGGGGGCTGGCCTTCCTATG +
Preference number: 2 (lower is better)
Translates to: YARACLQMPACTRMWATVVGSGR*GAGLPM
Trigger: CATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAAC...CACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR CCA 90 bp CAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGGAGGGGCCATGGGGCTaGGGCTGTGAATCCCGTGCA +
Preference number: 2 (lower is better)
Translates to: QECGPQWNGTLGEEATGEEGPWG*GCESRA
Trigger: TGCACGGGATTCACAGCCCCAGCCCCATGGCCCCTC...CTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR CCA 90 bp TCCAGCGTGCAAAGGGAGGTCTGTGCTCGGCTTCAGCTGTTGGCAGTGGGAGATGGAAGTGGGAGGGCCTaGGCACATACCCCTCAGGCT +
Preference number: 2 (lower is better)
Translates to: SSVQREVCARLQLLAVGDGSGRA*AHTPQA
Trigger: AGCCTGAGGGGTATGTGCCCAGGCCCTCCCACTTCC...ATCTCCCACTGCCAACAGCTGAAGCCGAGCACAGACCTCCCTTTGCACGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR TCA 90 bp GGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCGTGCAACCCGTGCAGCACGGGTaGCAGGGCCACTTCCAAAGC +
Preference number: 2 (lower is better)
Translates to: GTVHWGKKPQVSNCSSVQPVQHG*QGHFQS
Trigger: GCTTTGGAAGTGGCCCTGTCACCCGTGCTGCACGGG...TTGCACGCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR TCA 90 bp GGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCGTGCAAATGGGGCTGGGGCTGTaGATCCCGTGCAGCACGGGT +
Preference number: 2 (lower is better)
Translates to: GTVHWGKKPQVSNCSSVQMGLGL*IPCSTG
Trigger: ACCCGTGCTGCACGGGATTCACAGCCCCAGCCCCAT...TTGCACGCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR TCA 90 bp CACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCATGGGGCTGGGGCTGTaGATCCCGTGCAGCACGGGT +
Preference number: 2 (lower is better)
Translates to: HSGTVHWGKKPQVSNCSSMGLGL*IPCSTG
Trigger: ACCCGTGCTGCACGGGATTCACAGCCCCAGCCCCAT...GCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR CCA 90 bp TGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGTGCGGCTGCTGAGCTaGAAAGTGGATGCGGAGGAC +
Preference number: 2 (lower is better)
Translates to: CKCPRAQECGPQWNGTLGVRLLS*KVDAED
Trigger: GTCCTCCGCATCCACTTTCCAGCTCAGCAGCCGCAC...CCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR TCA 90 bp CCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCGCAGCACACAGCATTTaGGGAGAGGCAGACAACTCG +
Preference number: 2 (lower is better)
Translates to: PACTRMWATVERYTGGRSAAHSI*GEADNS
Trigger: CGAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGC...GCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR GCA 90 bp CAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGGCAAAGGGAGGTCTGTaGTCGGCTTCAGCTGTTGGC +
Preference number: 2 (lower is better)
Translates to: QECGPQWNGTLGEEATGEAKGGL*SASAVG
Trigger: GCCAACAGCTGAAGCCGAGCACAGACCTCCCTTTGC...CTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR CAA 90 bp AGCCATCACCATTGTCATCGCCTGGACAATTGCAGCACACAGCATTaGAGGAGAGGCAGACAACTCGGGAAGTGGGAGGGCCTGGGCACA +
Preference number: 2 (lower is better)
Translates to: SHHHCHRLDNCSTQH*RRGRQLGKWEGLGT
Trigger: TGTGCCCAGGCCCTCCCACTTCCCGAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAATGGTGATGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR CCA 90 bp TCCAGCGTGCAAAGGGAGGTCTGTGCTCGGCTTCAGCTGTTGGCAGTGGGAGATATGCGGAGGACGTTATaGGGCAGGAGTTTTGAGGTG +
Preference number: 2 (lower is better)
Translates to: SSVQREVCARLQLLAVGDMRRTL*GRSFEV
Trigger: CACCTCAAAACTCCTGCCCCATAACGTCCTCCGCAT...ATCTCCCACTGCCAACAGCTGAAGCCGAGCACAGACCTCCCTTTGCACGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR CCA 90 bp GCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGACCATTGTCATCGCCTaGACAATTGCAGCACACAGC +
Preference number: 2 (lower is better)
Translates to: ANARVHKNVGHSGTVHWGTIVIA*TIAAHS
Trigger: GCTGTGTGCTGCAATTGTCCAGGCGATGACAATGGT...CCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR CCA 90 bp TCCAGCGTGCAAAGGGAGGTCTGTGCTCGGCTTCAGCTGTTGGCAGTGGGAGATACCATTGTCATCGCCTaGACAATTGCAGCACACAGC +
Preference number: 2 (lower is better)
Translates to: SSVQREVCARLQLLAVGDTIVIA*TIAAHS
Trigger: GCTGTGTGCTGCAATTGTCCAGGCGATGACAATGGT...ATCTCCCACTGCCAACAGCTGAAGCCGAGCACAGACCTCCCTTTGCACGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR CAA 90 bp CTGGTGTGTTCTCTGGAGCCATCACCATTGTCATCGCCTGGACAATaGCAGCACACAGCATTTGAGGAGAGGCAGACAACTCGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: LVCSLEPSPLSSPGQ*QHTAFEERQTTREV
Trigger: CACTTCCCGAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAATGGTGATGGCTCCAGAGAACACACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR GCA 90 bp AGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCGTGCATCGCCTGGACAATTaGAGCACACAGCATTTGAGG +
Preference number: 2 (lower is better)
Translates to: SGTVHWGKKPQVSNCSSVHRLDN*STQHLR
Trigger: CCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATG...CACGCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR TCA 90 bp ATGAATCACAGACGCAGAGTGTGCACGCATGTGCTTGGTGTGCATTCAGATAGGGGAAGAAGCCACAGGTaGGTAACTGTTCCAGCGTGC +
Preference number: 2 (lower is better)
Translates to: MNHRRRVCTHVLGVHSDRGRSHR*VTVPAC
Trigger: GCACGCTGGAACAGTTACTCACCTGTGGCTTCTTCC...CCTATCTGAATGCACACCAAGCACATGCGTGCACACTCTGCGTCTGTGATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR GCA 90 bp ATGAATCACAGACGCAGAGTGTGCACGCATGTGCTTGGTGTGCATTCAGATAGGGAGCTGGAAAGTGGATaGGGAGGACGTTATGGGGCA +
Preference number: 2 (lower is better)
Translates to: MNHRRRVCTHVLGVHSDRELESG*GGRYGA
Trigger: TGCCCCATAACGTCCTCCGCATCCACTTTCCAGCTC...CCTATCTGAATGCACACCAAGCACATGCGTGCACACTCTGCGTCTGTGATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR GCA 90 bp ATCACAGACGCAGAGTGTGCACGCATGTGCTTGGTGTGCATTCAGATAGGTAACCTGCAAATGCCCGCGTaGACAAGAATGTGGGCCACA +
Preference number: 2 (lower is better)
Translates to: ITDAECARMCLVCIQIGNLQMPA*TRMWAT
Trigger: TGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAG...GTTACCTATCTGAATGCACACCAAGCACATGCGTGCACACTCTGCGTCTGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR CCA 90 bp ATGAATCACAGACGCAGAGTGTGCACGCATGTGCTTGGTGTGCATTCAGATAGGGAATGTGGGCCACAGTaGAACGGTACACTGGGGGAA +
Preference number: 2 (lower is better)
Translates to: MNHRRRVCTHVLGVHSDRECGPQ*NGTLGE
Trigger: TTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTC...CCTATCTGAATGCACACCAAGCACATGCGTGCACACTCTGCGTCTGTGATTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR CCA 90 bp CATTGTCATCGCCTGGACAATTGCAGCACACAGCATTTGAGGAGAGGCAGACAAATGCGGAGGACGTTATaGGGCAGGAGTTTTGAGGTG +
Preference number: 2 (lower is better)
Translates to: HCHRLDNCSTQHLRRGRQMRRTL*GRSFEV
Trigger: CACCTCAAAACTCCTGCCCCATAACGTCCTCCGCAT...TTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR CCA 72 bp CTCGGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTaGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGGG +
Preference number: 3 (lower is better)
Translates to: LGFSCWQWEMRG*PSYASDRPSLG
Trigger: CCCCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR TCA 72 bp CATGGGGCTGGGGCTGTGAATCCCGTGCAGCACGGGTaGCAGGGCCACTTCCAAAGCCTGCAGGCTCACAGC +
Preference number: 3 (lower is better)
Translates to: HGAGAVNPVQHG*QGHFQSLQAHS
Trigger: GCTGTGAGCCTGCAGGCTTTGGAAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCCCCAGCCCCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR CCA 72 bp ACCCCTCAGGCTGAGCCTCGGGTGCGGCTGCTGAGCTaGAAAGTGGATGCGGAGGACGTTATGGGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: TPQAEPRVRLLS*KVDAEDVMGQE
Trigger: CTCCTGCCCCATAACGTCCTCCGCATCCACTTTCCAGCTCAGCAGCCGCACCCGAGGCTCAGCCTGAGGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR GCA 72 bp GGTCTGTGCTCGGCTTCAGCTGTTGGCAGTGGGAGATaGGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCA +
Preference number: 3 (lower is better)
Translates to: GLCSASAVGSGR*GAGLPMPVTGP
Trigger: TGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAGCACAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR CAA 90 bp AGGGAGGTCTGTGCTCGGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTATGGGGCAGGAGTTTaGAGGTGTGGAGAGGGGCCA +
Preference number: 3 (lower is better)
Translates to: REVCARLQLLAVGDAGLAYGAGV*RCGEGP
Trigger: TGGCCCCTCTCCACACCTCAAAACTCCTGCCCCATA...GGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAGCACAGACCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR CAA 90 bp GGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCGTGCAAGCTCGGCTTCAGCTGTaGGCAGTGGGAGATGCGGGG +
Preference number: 3 (lower is better)
Translates to: GTVHWGKKPQVSNCSSVQARLQL*AVGDAG
Trigger: CCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAGC...TTGCACGCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR CCA 72 bp AGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTaGGCCACAGTGGAACGGTACACTGGGGGAAGAAGC +
Preference number: 3 (lower is better)
Translates to: RACLQMPACTRM*ATVERYTGGRS
Trigger: GCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR CAA 90 bp TCCAGCGTGCAAAGGGAGGTCTGTGCTCGGCTTCAGCTGTTGGCAGTGGGAGATTATGGGGCAGGAGTTTaGAGGTGTGGAGAGGGGCCA +
Preference number: 3 (lower is better)
Translates to: SSVQREVCARLQLLAVGDYGAGV*RCGEGP
Trigger: TGGCCCCTCTCCACACCTCAAAACTCCTGCCCCATA...ATCTCCCACTGCCAACAGCTGAAGCCGAGCACAGACCTCCCTTTGCACGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR CAA 90 bp ACTACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGCTGGAGCCATCACCATaGTCATCGCCTGGACAATTG +
Preference number: 3 (lower is better)
Translates to: TTRERACKCPRAQECGPQLEPSP*SSPGQL
Trigger: CAATTGTCCAGGCGATGACAATGGTGATGGCTCCAG...CTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR GCA 72 bp GGTAACTACGCGAGAGCGTGCCTGCAAATGCCCGCGTaGACAAGAATGTGGGCCACAGTGGAACGGTACACT +
Preference number: 3 (lower is better)
Translates to: GNYARACLQMPA*TRMWATVERYT
Trigger: AGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGTTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR CCA 72 bp TGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTaGAACGGTACACTGGGGGAAGAAGCCACAGGTGAG +
Preference number: 3 (lower is better)
Translates to: CKCPRAQECGPQ*NGTLGEEATGE
Trigger: CTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR CAA 90 bp TCCAGCGTGCAAAGGGAGGTCTGTGCTCGGCTTCAGCTGTTGGCAGTGGGAGATTCATCGCCTGGACAATaGCAGCACACAGCATTTGAG +
Preference number: 3 (lower is better)
Translates to: SSVQREVCARLQLLAVGDSSPGQ*QHTAFE
Trigger: CTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGA...ATCTCCCACTGCCAACAGCTGAAGCCGAGCACAGACCTCCCTTTGCACGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR TCA 72 bp ATTGTCATCGCCTGGACAATTGCAGCACACAGCATTTaGGGAGAGGCAGACAACTCGGGAAGTGGGAGGGCC +
Preference number: 3 (lower is better)
Translates to: IVIAWTIAAHSI*GEADNSGSGRA
Trigger: GGCCCTCCCACTTCCCGAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR TCA 72 bp ACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTaGGTAACTGTTCCAGCGTGCAAAGGGAGGTCTGTG +
Preference number: 3 (lower is better)
Translates to: TVERYTGGRSHR*VTVPACKGRSV
Trigger: CACAGACCTCCCTTTGCACGCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR GCA 72 bp TTGGTGTGCATTCAGATAGGTAACTACGCGAGAGCGTaGCTGCAAATGCCCGCGTGCACAAGAATGTGGGCC +
Preference number: 3 (lower is better)
Translates to: LVCIQIGNYARA*LQMPACTRMWA
Trigger: GGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGTTACCTATCTGAATGCACACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR-3UTR CAA 90 bp CAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTCATCGCCTGGACAATaGCAGCACACAGCATTTGAG +
Preference number: 3 (lower is better)
Translates to: QECGPQWNGTLGEEATGESSPGQ*QHTAFE
Trigger: CTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGA...CTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR GCA 72 bp ATCACAGACGCAGAGTGTGCACGCATGTGCTTGGTGTaGATTCAGATAGGTAACTACGCGAGAGCGTGCCTG +
Preference number: 3 (lower is better)
Translates to: ITDAECARMCLV*IQIGNYARACL
Trigger: CAGGCACGCTCTCGCGTAGTTACCTATCTGAATGCACACCAAGCACATGCGTGCACACTCTGCGTCTGTGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR TCA 72 bp CACAGCCCTGGGAGGAGCTTAGACCACTACATGAAATaGATCACAGACGCAGAGTGTGCACGCATGTGCTTG +
Preference number: 3 (lower is better)
Translates to: HSPGRSLDHYMK*ITDAECARMCL
Trigger: CAAGCACATGCGTGCACACTCTGCGTCTGTGATTCATTTCATGTAGTGGTCTAAGCTCCTCCCAGGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR CCA 72 bp TGGGGGCAGAGGCTCATAAATAGCTGGTGTGTTCTCTaGAGCCATCACCATTGTCATCGCCTGGACAATTGC +
Preference number: 3 (lower is better)
Translates to: WGQRLINSWCVL*SHHHCHRLDNC
Trigger: GCAATTGTCCAGGCGATGACAATGGTGATGGCTCCAGAGAACACACCAGCTATTTATGAGCCTCTGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR CCA 72 bp TTTATTTTCCTATACCCTGTCAGATCCACACAGCCCTaGGAGGAGCTTAGACCACTACATGAAATGAATCAC +
Preference number: 3 (lower is better)
Translates to: FIFLYPVRSTQP*EELRPLHEMNH
Trigger: GTGATTCATTTCATGTAGTGGTCTAAGCTCCTCCCAGGGCTGTGTGGATCTGACAGGGTATAGGAAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGGGGCAGGGCGCAGATCCAGCCTaGAGCTGCTCTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRCGAGLPMPVTGPAWGQGADPA*SCSWGW
Trigger: CCAGCCCCAAGAGCAGCTCCAGGCTGGATCTGCGCC...CTGCCCCCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGGCGTGGAGCGGTGGGTaGAGCGGTAGCTGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: GSGRCGAGLPMPVTGPAWAWSGG*SGSWGR
Trigger: CCTACCCCAGCTACCGCTCCACCCACCGCTCCACGC...CCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp GGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGCCCGTGCAGCACGGGTaGCAGGGCCACTTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GSGRCGAGLPMPVTGPAWPVQHG*QGHFQS
Trigger: GCTTTGGAAGTGGCCCTGTCACCCGTGCTGCACGGG...CCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp AGGGAGGTCTGTGCTCGGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCGCCTTCCTATGCCAGTaGCAGGCCCAGCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: REVCARLQLLAVGDAGLAAFLCQ*QAQPGG
Trigger: GCCCCCAGGCTGGGCCTGTCACTGGCATAGGAAGGC...GGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAGCACAGACCTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGGGGCAGGTGCTGGGGTGGCCATaGAGCTGGGCTCTTGGGTTG +
Preference number: 4 (lower is better)
Translates to: GRCGAGLPMPVTGPAWGQVLGWP*SWALGL
Trigger: CAACCCAAGAGCCCAGCTGCATGGCCACCCCAGCAC...CTGCCCCCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GAAGTGGGAGGGCCTGGGCACATACCCCTCAGGCTGAGCCTCGGGTGCGGCTGCACAGGGACTCGCCATTaGCCTTGCAGGCCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: EVGGPGHIPLRLSLGCGCTGTRH*PCRPRR
Trigger: CCTTCGGGGCCTGCAAGGGCAATGGCGAGTCCCTGT...GCAGCCGCACCCGAGGCTCAGCCTGAGGGGTATGTGCCCAGGCCCTCCCACTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGGGGCAGATCTTGCACTCGCTCTaGAGCCGCTGCCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GRCGAGLPMPVTGPAWGQILHSL*SRCRCH
Trigger: GTGGCAGCGGCAGCGGCTGCAGAGCGAGTGCAAGAT...CTGCCCCCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGGGGTGGCCATGCAGCTaGGCTCTTGGGTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GSGRCGAGLPMPVTGPAWGWPCS*ALGLGW
Trigger: CCAGCCCAACCCAAGAGCCCAGCTGCATGGCCACCC...CCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGGGGCAGGAGCCCAGGGACTCCTaGCGCCTCCGTATGGAGATC +
Preference number: 4 (lower is better)
Translates to: GRCGAGLPMPVTGPAWGQEPRDS*RLRMEI
Trigger: GATCTCCATACGGAGGCGCCAGGAGTCCCTGGGCTC...CTGCCCCCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGGGGCAGGGAAGTGGGAGGGCCTaGGCACATACCCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GRCGAGLPMPVTGPAWGQGSGRA*AHTPQA
Trigger: AGCCTGAGGGGTATGTGCCCAGGCCCTCCCACTTCC...CTGCCCCCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGGTGCTGGGGTGGCCATaGAGCTGGGCTCTTGGGTTG +
Preference number: 4 (lower is better)
Translates to: GSGRCGAGLPMPVTGPAWVLGWP*SWALGL
Trigger: CAACCCAAGAGCCCAGCTGCATGGCCACCCCAGCAC...CCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GCTCGGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTCGCTCTGCAGCCGCTaGCGCTGCCACAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: ARLQLLAVGDAGLAFLCQSLCSR*RCHRDS
Trigger: CGAGTCCCTGTGGCAGCGGCAGCGGCTGCAGAGCGA...CTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGGGGCAGCTTGGCGATGACGGCTaGCACCGAGCTCATGTAGGG +
Preference number: 4 (lower is better)
Translates to: GRCGAGLPMPVTGPAWGQLGDDG*HRAHVG
Trigger: CCCTACATGAGCTCGGTGCCAGCCGTCATCGCCAAG...CTGCCCCCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp CCATGGGGCTGGGGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTCCACAGGTGCTGTGGGACTaGTGGATGGAAGCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: PWGWGCESRAARVTGPLPQVLWD*WMEAGP
Trigger: TGGGCCGGCTTCCATCCATCAGTCCCACAGCACCTG...TGGAAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCCCCAGCCCCATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp GGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTCCAAAGCCTGCAGGCACATACCCCTCAGGCTaGGCCTCGGGTGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GCESRAARVTGPLPKPAGTYPSG*ASGAAA
Trigger: AGCAGCCGCACCCGAGGCTCAGCCTGAGGGGTATGT...GCCTGCAGGCTTTGGAAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTCCAAAGCCTGCAGGCGGCCCAGGCTGGAGATaGTGCTCTGGGAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GCESRAARVTGPLPKPAGGPGWR*CSGSCP
Trigger: GGGACAGCTCCCAGAGCAGCATCTCCAGCCTGGGCC...GCCTGCAGGCTTTGGAAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGACTCGCCATTGCCCTTaGAGGCCCCGAAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GSGRCGAGLPMPVTGPAWTRHCP*RPRRSG
Trigger: TCCAGACCTTCGGGGCCTGCAAGGGCAATGGCGAGT...CCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp TCGGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGTCGCTCTGCAGCCGCTaGCGCTGCCACAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: SASAVGSGRCGAGLPMPVSLCSR*RCHRDS
Trigger: CGAGTCCCTGTGGCAGCGGCAGCGGCTGCAGAGCGA...CACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGGGGCAGCTTCCCTGGAGTCTCTaGTTCGTGTCCCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GRCGAGLPMPVTGPAWGQLPWSL*FVSLGS
Trigger: AGACCCCAGGGACACGAAGCAGAGACTCCAGGGAAG...CTGCCCCCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTCCAAAGCCTGCAGGCGAAGCCGGCCCAGGCTaGAGATGCTGCTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GCESRAARVTGPLPKPAGEAGPG*RCCSGS
Trigger: GCTCCCAGAGCAGCATCTCCAGCCTGGGCCGGCTTC...GCCTGCAGGCTTTGGAAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACGGGTGGAGCGGTAGCTaGGGTAGGGGCGACTGTGCC +
Preference number: 4 (lower is better)
Translates to: GFSCWQWEMRGWPSYASDGWSGS*GRGDCA
Trigger: GGCACAGTCGCCCCTACCCCAGCTACCGCTCCACCC...GTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGGGGCAGCCCCTTGGTCTTCCCTaGAGTCTCTGCTTCGTGTCC +
Preference number: 4 (lower is better)
Translates to: GRCGAGLPMPVTGPAWGQPLGLP*SLCFVS
Trigger: GGACACGAAGCAGAGACTCCAGGGAAGACCAAGGGG...CTGCCCCCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp GCTCGGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGGCCAGCGGGCGTGTaGTTACCAGGTAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: ARLQLLAVGDAGLAFLCQWPAGV*LPGSGP
Trigger: TGGACCGCTACCTGGTAATCACACGCCCGCTGGCCA...CTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp GGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACCCCGTGCAGCACGGGTaGCAGGGCCACTTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GFSCWQWEMRGWPSYASDPVQHG*QGHFQS
Trigger: GCTTTGGAAGTGGCCCTGTCACCCGTGCTGCACGGG...GTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp TCGGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGGGCCCAGGCTGGAGATaGTGCTCTGGGAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SASAVGSGRCGAGLPMPVGPGWR*CSGSCP
Trigger: GGGACAGCTCCCAGAGCAGCATCTCCAGCCTGGGCC...CACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GCTCGGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGGCCCAGCAGGACAAATaGCGCACGCCTCTTGGACGC +
Preference number: 4 (lower is better)
Translates to: ARLQLLAVGDAGLAFLCQAQQDK*RTPLGR
Trigger: GCGTCCAAGAGGCGTGCGGCATTTGTCCTGCTGGGC...CTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTCCAAAGCCTGCAGGCGCCCAGCAGGACAAATaGCGCACGCCTCTTGGACGC +
Preference number: 4 (lower is better)
Translates to: GCESRAARVTGPLPKPAGAQQDK*RTPLGR
Trigger: GCGTCCAAGAGGCGTGCGGCATTTGTCCTGCTGGGC...GCCTGCAGGCTTTGGAAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GAAGTGGGAGGGCCTGGGCACATACCCCTCAGGCTGAGCCTCGGGTGCGGCTGCGATGGGGTTGTGGATTaGAGAGGCCTTGGCGATGAC +
Preference number: 4 (lower is better)
Translates to: EVGGPGHIPLRLSLGCGCDGVVD*RGLGDD
Trigger: GTCATCGCCAAGGCCTCTGCAATCCACAACCCCATC...GCAGCCGCACCCGAGGCTCAGCCTGAGGGGTATGTGCCCAGGCCCTCCCACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGCCCAGGCAGGGCAGGTaGTGGGCAATGGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: ANARVHKNVGHSGTVHWGPRQGR*WAMATL
Trigger: CAGGGTGGCCATTGCCCAGCACCTGCCCTGCCTGGG...CCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp TACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGCCCAGGCAGGGCAGGTaGTGGGCAATGGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: YARACLQMPACTRMWATVPRQGR*WAMATL
Trigger: CAGGGTGGCCATTGCCCAGCACCTGCCCTGCCTGGG...CACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGAGCTCCCCACACAGCTaGTGCCTCCATGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GSGRCGAGLPMPVTGPAWSSPHS*CLHVCP
Trigger: TGGACACACATGGAGGCAGCAGCTGTGTGGGGAGCT...CCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp CCATGGGGCTGGGGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTCCAACGCGAGAGCGTGCCTaGAAATGCCCGCGTGCACAA +
Preference number: 4 (lower is better)
Translates to: PWGWGCESRAARVTGPLPTRERA*KCPRAQ
Trigger: TTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGT...TGGAAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCCCCAGCCCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGGGGCAGGGGTTCATCCTGAGTTaGGATGGTCCTTGCTCGAGC +
Preference number: 4 (lower is better)
Translates to: GRCGAGLPMPVTGPAWGQGFILS*DGPCSS
Trigger: GCTCGAGCAAGGACCATCCCAACTCAGGATGAACCC...CTGCCCCCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GCTCGGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGGCTGGGCGGGACTCTTaGCCCCGAAGGAGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: ARLQLLAVGDAGLAFLCQAGRDS*PRRRVH
Trigger: ATGAACCCTCCTTCGGGGCCAAGAGTCCCGCCCAGC...CTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp AGGGAGGTCTGTGCTCGGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTGTGGGACTGATGGATaGAAGCCGGCCCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: REVCARLQLLAVGDAGLACGTDG*KPAQAG
Trigger: TCCAGCCTGGGCCGGCTTCCATCCATCAGTCCCACA...GGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAGCACAGACCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTCCAAAGCCTGCAGGCGAGCCCAGGGACTCCTaGCGCCTCCGTATGGAGATC +
Preference number: 4 (lower is better)
Translates to: GCESRAARVTGPLPKPAGEPRDS*RLRMEI
Trigger: GATCTCCATACGGAGGCGCCAGGAGTCCCTGGGCTC...GCCTGCAGGCTTTGGAAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GCTCGGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGCTCGGCTTCAGCTGTTaGCAGTGGGAGATGCGGGGC +
Preference number: 4 (lower is better)
Translates to: ARLQLLAVGDAGLAFLCQLGFSC*QWEMRG
Trigger: GCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAG...CTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp GGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGTATAGAGGCTACTGGTaGAGAAGACAGGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GSGRCGAGLPMPVTGPAWYRGYW*RRQGPG
Trigger: CCCAGGCCCCTGTCTTCTTCACCAGTAGCCTCTATA...CCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp GCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGATGGGGCTGGGGCTGTaGATCCCGTGCAGCACGGGT +
Preference number: 4 (lower is better)
Translates to: ANARVHKNVGHSGTVHWGMGLGL*IPCSTG
Trigger: ACCCGTGCTGCACGGGATTCACAGCCCCAGCCCCAT...CCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp CCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCACATACCCCTCAGGCTaGGCCTCGGGTGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PACTRMWATVERYTGGRSTYPSG*ASGAAA
Trigger: AGCAGCCGCACCCGAGGCTCAGCCTGAGGGGTATGT...GCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp TACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGCCACCAGCTGGGTGGTaGTGGGGTGGCCATGCAGCT +
Preference number: 4 (lower is better)
Translates to: YARACLQMPACTRMWATVPPAGW*WGGHAA
Trigger: AGCTGCATGGCCACCCCAGCACCACCCAGCTGGTGG...CACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGGCCATGGGGCTGGGGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTCTGCAAATGCCCGCGTaGACAAGAATGTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: GPWGWGCESRAARVTGPLLQMPA*TRMWAT
Trigger: TGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAG...AAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCCCCAGCCCCATGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGGAGCGTGCCTGCAAATaGCCGCGTGCACAAGAATGT +
Preference number: 4 (lower is better)
Translates to: GSGRCGAGLPMPVTGPAWERACK*PRAQEC
Trigger: ACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTC...CCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACAGCTGTCCCACCAGCTaGGTGGTGCTGGGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RERACKCPRAQECGPQWNSCPTS*VVLGWP
Trigger: TGGCCACCCCAGCACCACCCAGCTGGTGGGACAGCT...GTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp TACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAAGCCGGCCCAGGCTaGAGATGCTGCTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: YARACLQMPACTRMWATVEAGPG*RCCSGS
Trigger: GCTCCCAGAGCAGCATCTCCAGCCTGGGCCGGCTTC...CACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp TGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGGGTGGAGCGGTAGCTaGGGTAGGGGCGACTGTGCC +
Preference number: 4 (lower is better)
Translates to: CKCPRAQECGPQWNGTLGGWSGS*GRGDCA
Trigger: GGCACAGTCGCCCCTACCCCAGCTACCGCTCCACCC...CCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCGTGTCCCTGGGGTCTaGGGGGTGCCTTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PACTRMWATVERYTGGRSRVPGV*GVPWLP
Trigger: TGGAAGCCAAGGCACCCCCCAGACCCCAGGGACACG...GCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp TCGGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGGGAAGTGGGAGGGCCTaGGCACATACCCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SASAVGSGRCGAGLPMPVGSGRA*AHTPQA
Trigger: AGCCTGAGGGGTATGTGCCCAGGCCCTCCCACTTCC...CACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp CGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACTGGCCAGCGGGCGTGTaGTTACCAGGTAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: RERACKCPRAQECGPQWNWPAGV*LPGSGP
Trigger: TGGACCGCTACCTGGTAATCACACGCCCGCTGGCCA...GTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp GCTCGGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGGTATGGAGATCCAGCTaGGGTTGGAGGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ARLQLLAVGDAGLAFLCQVWRSS*GWRCGW
Trigger: CCAGCCACACCTCCAACCTCAGCTGGATCTCCATAC...CTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp TCCAGCGTGCAAAGGGAGGTCTGTGCTCGGCTTCAGCTGTTGGCAGTGGGAGATATGGGGCTGGGGCTGTaGATCCCGTGCAGCACGGGT +
Preference number: 4 (lower is better)
Translates to: SSVQREVCARLQLLAVGDMGLGL*IPCSTG
Trigger: ACCCGTGCTGCACGGGATTCACAGCCCCAGCCCCAT...ATCTCCCACTGCCAACAGCTGAAGCCGAGCACAGACCTCCCTTTGCACGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp CACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGGCCTTCCTATGCCAGTaGCAGGCCCAGCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: HKNVGHSGTVHWGKKPQVAFLCQ*QAQPGG
Trigger: GCCCCCAGGCTGGGCCTGTCACTGGCATAGGAAGGC...CACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp GGGCCATGGGGCTGGGGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTTCTGCATCATCACAGTaGCTCCACGAAGCACAGCTC +
Preference number: 4 (lower is better)
Translates to: GPWGWGCESRAARVTGPLSASSQ*LHEAQL
Trigger: GAGCTGTGCTTCGTGGAGTCACTGTGATGATGCAGA...AAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCCCCAGCCCCATGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372071.6
CDS-3UTR GCA 90 bp GGGCCATGGGGCTGGGGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTTCAGGACTTCAGCTGTaGTCAGCCTCCCAACTTTCC +
Preference number: 4 (lower is better)
Translates to: GPWGWGCESRAARVTGPLSGLQL*SASQLS
Trigger: GGAAAGTTGGGAGGCTGAGCACAGCTGAAGTCCTGA...AAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCCCCAGCCCCATGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGGCCATGGGGCTGGGGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTAGTTGGGATGGTCCTTaGTCGAGCCCACAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: GPWGWGCESRAARVTGPLSWDGP*SSPQRS
Trigger: ACTTCTCTGTGGGCTCGAGCAAGGACCATCCCAACT...AAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCCCCAGCCCCATGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GAAGTGGGAGGGCCTGGGCACATACCCCTCAGGCTGAGCCTCGGGTGCGGCTGCCATCGCCTGGACAATTaGAGCACACAGCATTTGAGG +
Preference number: 4 (lower is better)
Translates to: EVGGPGHIPLRLSLGCGCHRLDN*STQHLR
Trigger: CCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATG...GCAGCCGCACCCGAGGCTCAGCCTGAGGGGTATGTGCCCAGGCCCTCCCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACGTTGGCAGTGGGAGATaGGGGGCTGGCCTTCCTATG +
Preference number: 4 (lower is better)
Translates to: GFSCWQWEMRGWPSYASDVGSGR*GAGLPM
Trigger: CATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAAC...GTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp TACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGCTGGGCGGGACTCTTaGCCCCGAAGGAGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: YARACLQMPACTRMWATVAGRDS*PRRRVH
Trigger: ATGAACCCTCCTTCGGGGCCAAGAGTCCCGCCCAGC...CACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp TGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGCTGGGCTCTTGGGTTaGGCTGGGCGGGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: CKCPRAQECGPQWNGTLGAGLLG*AGRDSW
Trigger: CCAAGAGTCCCGCCCAGCCCAACCCAAGAGCCCAGC...CCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp TGCAGCACACAGCATTTGAGGAGAGGCAGACAACTCGGGAAGTGGGAGGGCCTGGCTGGGCTCTTGGGTTaGGCTGGGCGGGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: CSTQHLRRGRQLGKWEGLAGLLG*AGRDSW
Trigger: CCAAGAGTCCCGCCCAGCCCAACCCAAGAGCCCAGC...CAGGCCCTCCCACTTCCCGAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp ACTACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGCTGGAACATCAACCGTaGGGAGGGGGACCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TTRERACKCPRAQECGPQLEHQP*GGGPRQ
Trigger: CTGCCTGGGTCCCCCTCCCCACGGTTGATGTTCCAG...CTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACATGCCGCACGCCTCTTaGACGCCACACCAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GFSCWQWEMRGWPSYASDMPHAS*TPHQRW
Trigger: CCACCTTTGGTGTGGCGTCCAAGAGGCGTGCGGCAT...GTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp TGCAGCACACAGCATTTGAGGAGAGGCAGACAACTCGGGAAGTGGGAGGGCCTGCCAGCCGAAGAAGGGTaGCAGACTCCAGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CSTQHLRRGRQLGKWEGLPAEEG*QTPGQG
Trigger: GCCCTGGCCTGGAGTCTGCCACCCTTCTTCGGCTGG...CAGGCCCTCCCACTTCCCGAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCTGAGGTTGGAGGTGTaGCTGGTCAGCGTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PACTRMWATVERYTGGRSLRLEV*LVSVER
Trigger: CCGCTCCACGCTGACCAGCCACACCTCCAACCTCAG...GCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp TACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGGGCGTCCTACATCCTaGGGTCCTGGCTGGGGATCA +
Preference number: 4 (lower is better)
Translates to: YARACLQMPACTRMWATVGRPTS*GPGWGS
Trigger: TGATCCCCAGCCAGGACCCCAGGATGTAGGACGCCC...CACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACCTCGGCTTCAGCTGTTaGCAGTGGGAGATGCGGGGC +
Preference number: 4 (lower is better)
Translates to: RERACKCPRAQECGPQWNLGFSC*QWEMRG
Trigger: GCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAG...GTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR CAA 72 bp AGCGTGCAAAGGGAGGTCTGTGCTCGGCTTCAGCTGTaGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGC +
Preference number: 4 (lower is better)
Translates to: SVQREVCARLQL*AVGDAGLAFLC
Trigger: GCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAGCACAGACCTCCCTTTGCACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp GGGCCATGGGGCTGGGGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTCTGGTGAAGCGCAAATaGGTGAGTGTCGCAGTTATG +
Preference number: 4 (lower is better)
Translates to: GPWGWGCESRAARVTGPLLVKRK*VSVAVM
Trigger: CATAACTGCGACACTCACTCATTTGCGCTTCACCAG...AAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCCCCAGCCCCATGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241891.10
CDS-3UTR TCA 90 bp CAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGCACGCACGGCCGGCGTaGAGCTCATGTAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QECGPQWNGTLGEEATGEHARPA*SSCSPR
Trigger: CCTGGGACTACATGAGCTTCACGCCGGCCGTGCGTG...CTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp CAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGCAGAGGCCTTGGCGATaGCGGCTGGCACCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: QECGPQWNGTLGEEATGEQRPWR*RLAPSS
Trigger: TGAGCTCGGTGCCAGCCGTCATCGCCAAGGCCTCTG...CTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp AGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCGTGGCGACTGTGCCGGCGTaGTACACCCAGCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: SGTVHWGKKPQVSNCSSVATVPA*YTQQHP
Trigger: GGGGTGCTGCTGGGTGTATCACGCCGGCACAGTCGC...CACGCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp CACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCGCGACTGTGCCGGCGTaGTACACCCAGCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: HSGTVHWGKKPQVSNCSSATVPA*YTQQHP
Trigger: GGGGTGCTGCTGGGTGTATCACGCCGGCACAGTCGC...GCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp TCGGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGCATCCTCAGCACCCCTaGTTAGCCTACCCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SASAVGSGRCGAGLPMPVHPQHP*LAYPLL
Trigger: AAGCAGCGGGTAGGCTAAGCAGGGGTGCTGAGGATG...CACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACCATCCTCAGCACCCCTaGTTAGCCTACCCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GFSCWQWEMRGWPSYASDHPQHP*LAYPLL
Trigger: AAGCAGCGGGTAGGCTAAGCAGGGGTGCTGAGGATG...GTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGCTCCCCACACAGCTaGTGCCTCCATGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GFSCWQWEMRGWPSYASDSSPHS*CLHVCP
Trigger: TGGACACACATGGAGGCAGCAGCTGTGTGGGGAGCT...GTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GCTCGGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGGAGCTGGAAAGTGGATaGGGAGGACGTTATGGGGCA +
Preference number: 4 (lower is better)
Translates to: ARLQLLAVGDAGLAFLCQELESG*GGRYGA
Trigger: TGCCCCATAACGTCCTCCGCATCCACTTTCCAGCTC...CTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGACGCGAGAGCGTGCCTaGAAATGCCCGCGTGCACAA +
Preference number: 4 (lower is better)
Translates to: ANARVHKNVGHSGTVHWGTRERA*KCPRAQ
Trigger: TTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGT...CCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp TGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGCCTGGAGCTGCTCTTaGGGCTGGCGGTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: CKCPRAQECGPQWNGTLGAWSCS*GWRLLC
Trigger: ACAGAGCAACCGCCAGCCCCAAGAGCAGCTCCAGGC...CCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp TGCAGCACACAGCATTTGAGGAGAGGCAGACAACTCGGGAAGTGGGAGGGCCTGATGCAGCTGGGCTCTTaGGTTGGGCTGGGCGGGACT +
Preference number: 4 (lower is better)
Translates to: CSTQHLRRGRQLGKWEGLMQLGS*VGLGGT
Trigger: AGTCCCGCCCAGCCCAACCCAAGAGCCCAGCTGCAT...CAGGCCCTCCCACTTCCCGAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGGTCCCACCAGCTGGGTaGTGCTGGGGTGGCCATGCA +
Preference number: 4 (lower is better)
Translates to: HKNVGHSGTVHWGKKPQVVPPAG*CWGGHA
Trigger: TGCATGGCCACCCCAGCACCACCCAGCTGGTGGGAC...CACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp ACTACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGCTGGAGATGCTGCTCTaGGAGCTGTCCCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: TTRERACKCPRAQECGPQLEMLL*ELSHQL
Trigger: CAGCTGGTGGGACAGCTCCCAGAGCAGCATCTCCAG...CTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGTGTGGGACTGATGGATaGAAGCCGGCCCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ANARVHKNVGHSGTVHWGCGTDG*KPAQAG
Trigger: TCCAGCCTGGGCCGGCTTCCATCCATCAGTCCCACA...CCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACAGCAGCAGAGAAGCATaGTGTAGGCACGCACGGCCG +
Preference number: 4 (lower is better)
Translates to: RERACKCPRAQECGPQWNSSREA*CRHARP
Trigger: CGGCCGTGCGTGCCTACACCATGCTTCTCTGCTGCT...GTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp AGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCGTGGCGTGGAGCGGTGGGTaGAGCGGTAGCTGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SGTVHWGKKPQVSNCSSVAWSGG*SGSWGR
Trigger: CCTACCCCAGCTACCGCTCCACCCACCGCTCCACGC...CACGCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp AGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCGTGCACGCACGGCCGGCGTaGAGCTCATGTAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SGTVHWGKKPQVSNCSSVHARPA*SSCSPR
Trigger: CCTGGGACTACATGAGCTTCACGCCGGCCGTGCGTG...CACGCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp CACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCCAGAGGCCTTGGCGATaGCGGCTGGCACCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: HSGTVHWGKKPQVSNCSSQRPWR*RLAPSS
Trigger: TGAGCTCGGTGCCAGCCGTCATCGCCAAGGCCTCTG...GCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp GAAGTGGGAGGGCCTGGGCACATACCCCTCAGGCTGAGCCTCGGGTGCGGCTGCGACCACTACATGAAATaGATCACAGACGCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: EVGGPGHIPLRLSLGCGCDHYMK*ITDAEC
Trigger: ACACTCTGCGTCTGTGATTCATTTCATGTAGTGGTC...GCAGCCGCACCCGAGGCTCAGCCTGAGGGGTATGTGCCCAGGCCCTCCCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCGTGCAACCACCAGCTGGGTGGTaGTGGGGTGGCCATGCAGCT +
Preference number: 4 (lower is better)
Translates to: GTVHWGKKPQVSNCSSVQPPAGW*WGGHAA
Trigger: AGCTGCATGGCCACCCCAGCACCACCCAGCTGGTGG...TTGCACGCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp CAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGGAGGGACCGCCCATTTaGTTGCTGGGCAGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: QECGPQWNGTLGEEATGEEGPPI*LLGSSP
Trigger: TGGGGAGCTGCCCAGCAAGCAAATGGGCGGTCCCTC...CTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGGCAAAGGGAGGTCTGTaGTCGGCTTCAGCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: ANARVHKNVGHSGTVHWGAKGGL*SASAVG
Trigger: GCCAACAGCTGAAGCCGAGCACAGACCTCCCTTTGC...CCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACCACAGACGCAGAGTGTaGACGCATGTGCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GFSCWQWEMRGWPSYASDHRRRV*THVLGV
Trigger: CACACCAAGCACATGCGTGCACACTCTGCGTCTGTG...GTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CAGATAGGTAACTACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGGGCGCAGATCCAGCCTaGAGCTGCTCTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QIGNYARACLQMPACTRMGADPA*SCSWGW
Trigger: CCAGCCCCAAGAGCAGCTCCAGGCTGGATCTGCGCC...CATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGTTACCTATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CTGGAAAGTGGATGCGGAGGACGTTATGGGGCAGGAGTTTTGAGGTGTGGAGAGGGGTGGCCATGCAGCTaGGCTCTTGGGTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LESGCGGRYGAGVLRCGEGWPCS*ALGLGW
Trigger: CCAGCCCAACCCAAGAGCCCAGCTGCATGGCCACCC...CTCTCCACACCTCAAAACTCCTGCCCCATAACGTCCTCCGCATCCACTTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp AGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCGTGCAGGCCCCGAAGGTCTaGAGAGCCCGTCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SGTVHWGKKPQVSNCSSVQAPKV*RARPVS
Trigger: GGAGACAGGACGGGCTCTCCAGACCTTCGGGGCCTG...CACGCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp TGCAGCACACAGCATTTGAGGAGAGGCAGACAACTCGGGAAGTGGGAGGGCCTGCGCCCATTTGCTTGCTaGGCAGCTCCCCACACAGCT +
Preference number: 4 (lower is better)
Translates to: CSTQHLRRGRQLGKWEGLRPFAC*AAPHTA
Trigger: AGCTGTGTGGGGAGCTGCCCAGCAAGCAAATGGGCG...CAGGCCCTCCCACTTCCCGAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CAGATAGGTAACTACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGGAGGGGCCATGGGGCTaGGGCTGTGAATCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: QIGNYARACLQMPACTRMEGPWG*GCESRA
Trigger: TGCACGGGATTCACAGCCCCAGCCCCATGGCCCCTC...CATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGTTACCTATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp TGCAGCACACAGCATTTGAGGAGAGGCAGACAACTCGGGAAGTGGGAGGGCCTGGTGCGGCTGCTGAGCTaGAAAGTGGATGCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: CSTQHLRRGRQLGKWEGLVRLLS*KVDAED
Trigger: GTCCTCCGCATCCACTTTCCAGCTCAGCAGCCGCAC...CAGGCCCTCCCACTTCCCGAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp TGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGTGGGAGATGCGGGGCTaGCCTTCCTATGCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: CKCPRAQECGPQWNGTLGWEMRG*PSYASD
Trigger: GTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCA...CCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACGAATGTGGGCCACAGTaGAACGGTACACTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: GFSCWQWEMRGWPSYASDECGPQ*NGTLGE
Trigger: TTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTC...GTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp CACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGTGCCCAGCATCCCCGTaGGTCCCACCAGCAAGATCA +
Preference number: 4 (lower is better)
Translates to: HKNVGHSGTVHWGKKPQVCPASP*VPPARS
Trigger: TGATCTTGCTGGTGGGACTCACGGGGATGCTGGGCA...CACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp TCGGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGTGCAGAAGGTATAGATaGCCGTCAGGTTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SASAVGSGRCGAGLPMPVCRRYR*PSGCPA
Trigger: TGCTGGGCAACCTGACGGTCATCTATACCTTCTGCA...CACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp CGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACTATAGAGGCTACTGGTaGAGAAGACAGGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RERACKCPRAQECGPQWNYRGYW*RRQGPG
Trigger: CCCAGGCCCCTGTCTTCTTCACCAGTAGCCTCTATA...GTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp CAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGCTTGGGGCTGGCGGTTaGTCTGTGTCTGGTGAAGCG +
Preference number: 4 (lower is better)
Translates to: QECGPQWNGTLGEEATGELGAGG*SVSGEA
Trigger: CGCTTCACCAGACACAGAGCAACCGCCAGCCCCAAG...CTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp TGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGAGCCCAAGTCCCAGGTaGTGTGGGACTGATGGATGG +
Preference number: 4 (lower is better)
Translates to: CKCPRAQECGPQWNGTLGSPSPR*CGTDGW
Trigger: CCATCCATCAGTCCCACAGCACCTGGGACTTGGGCT...CCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp TGCAGCACACAGCATTTGAGGAGAGGCAGACAACTCGGGAAGTGGGAGGGCCTGAGCCCAAGTCCCAGGTaGTGTGGGACTGATGGATGG +
Preference number: 4 (lower is better)
Translates to: CSTQHLRRGRQLGKWEGLSPSPR*CGTDGW
Trigger: CCATCCATCAGTCCCACAGCACCTGGGACTTGGGCT...CAGGCCCTCCCACTTCCCGAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp AGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCGTGACAGGGACTCGCCATTaGCCTTGCAGGCCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: SGTVHWGKKPQVSNCSSVTGTRH*PCRPRR
Trigger: CCTTCGGGGCCTGCAAGGGCAATGGCGAGTCCCTGT...CACGCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCGTGCAAATCTTGCACTCGCTCTaGAGCCGCTGCCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GTVHWGKKPQVSNCSSVQILHSL*SRCRCH
Trigger: GTGGCAGCGGCAGCGGCTGCAGAGCGAGTGCAAGAT...TTGCACGCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp ACTACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGCTGCAAATGCCCGCGTaGACAAGAATGTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: TTRERACKCPRAQECGPQLQMPA*TRMWAT
Trigger: TGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAG...CTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACCGGAGGCTTCTGCTCTaGATCATCACAGTGACTCCA +
Preference number: 4 (lower is better)
Translates to: GFSCWQWEMRGWPSYASDRRLLL*IITVTP
Trigger: TGGAGTCACTGTGATGATGCAGAGCAGAAGCCTCCG...GTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372071.6
CDS-3UTR CCA 90 bp CTGGAAAGTGGATGCGGAGGACGTTATGGGGCAGGAGTTTTGAGGTGTGGAGAGCTGGAACATCAACCGTaGGGAGGGGGACCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LESGCGGRYGAGVLRCGELEHQP*GGGPRQ
Trigger: CTGCCTGGGTCCCCCTCCCCACGGTTGATGTTCCAG...CTCTCCACACCTCAAAACTCCTGCCCCATAACGTCCTCCGCATCCACTTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGCTTGGCGATGACGGCTaGCACCGAGCTCATGTAGGG +
Preference number: 4 (lower is better)
Translates to: HKNVGHSGTVHWGKKPQVLGDDG*HRAHVG
Trigger: CCCTACATGAGCTCGGTGCCAGCCGTCATCGCCAAG...CACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGCGCCCATTTGCTTGCTaGGCAGCTCCCCACACAGCT +
Preference number: 4 (lower is better)
Translates to: QECGPQWNGTLGEEATGERPFAC*AAPHTA
Trigger: AGCTGTGTGGGGAGCTGCCCAGCAAGCAAATGGGCG...CTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGGAAAGGGAGAGCCAGTaGGCGTCCTACATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HKNVGHSGTVHWGKKPQVERESQ*ASYILG
Trigger: CCCCAGGATGTAGGACGCCCACTGGCTCTCCCTTTC...CACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGGTGCGGCTGCTGAGCTaGAAAGTGGATGCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: HKNVGHSGTVHWGKKPQVVRLLS*KVDAED
Trigger: GTCCTCCGCATCCACTTTCCAGCTCAGCAGCCGCAC...CACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGGAATGTGGGCCACAGTaGAACGGTACACTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: ANARVHKNVGHSGTVHWGECGPQ*NGTLGE
Trigger: TTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTC...CCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp TCCAGCGTGCAAAGGGAGGTCTGTGCTCGGCTTCAGCTGTTGGCAGTGGGAGATGATGGGGTTGTGGATTaGAGAGGCCTTGGCGATGAC +
Preference number: 4 (lower is better)
Translates to: SSVQREVCARLQLLAVGDDGVVD*RGLGDD
Trigger: GTCATCGCCAAGGCCTCTGCAATCCACAACCCCATC...ATCTCCCACTGCCAACAGCTGAAGCCGAGCACAGACCTCCCTTTGCACGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCGTGCAAGACCGCCCATTTGCTTaGTGGGCAGCTCCCCACACA +
Preference number: 4 (lower is better)
Translates to: GTVHWGKKPQVSNCSSVQDRPFA*WAAPHT
Trigger: TGTGTGGGGAGCTGCCCAGCAAGCAAATGGGCGGTC...TTGCACGCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp TGCAGCACACAGCATTTGAGGAGAGGCAGACAACTCGGGAAGTGGGAGGGCCTGGAGCTGGAAAGTGGATaGGGAGGACGTTATGGGGCA +
Preference number: 4 (lower is better)
Translates to: CSTQHLRRGRQLGKWEGLELESG*GGRYGA
Trigger: TGCCCCATAACGTCCTCCGCATCCACTTTCCAGCTC...CAGGCCCTCCCACTTCCCGAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp CACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCGTTGGCAGTGGGAGATaGGGGGCTGGCCTTCCTATG +
Preference number: 4 (lower is better)
Translates to: HSGTVHWGKKPQVSNCSSVGSGR*GAGLPM
Trigger: CATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAAC...GCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTCCAAAGCCTGCAGGCGAGTGTGCACGCATGTaGTTGGTGTGCATTCAGATA +
Preference number: 4 (lower is better)
Translates to: GCESRAARVTGPLPKPAGECARM*LVCIQI
Trigger: TATCTGAATGCACACCAAGCACATGCGTGCACACTC...GCCTGCAGGCTTTGGAAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp TGCAGCACACAGCATTTGAGGAGAGGCAGACAACTCGGGAAGTGGGAGGGCCTGCATCCTGAGTTGGGATaGTCCTTGCTCGAGCCCACA +
Preference number: 4 (lower is better)
Translates to: CSTQHLRRGRQLGKWEGLHPELG*SLLEPT
Trigger: TGTGGGCTCGAGCAAGGACCATCCCAACTCAGGATG...CAGGCCCTCCCACTTCCCGAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CACCATTGTCATCGCCTGGACAATTGCAGCACACAGCATTTGAGGAGAGGCAGAGTCCCACCAGCTGGGTaGTGCTGGGGTGGCCATGCA +
Preference number: 4 (lower is better)
Translates to: HHCHRLDNCSTQHLRRGRVPPAG*CWGGHA
Trigger: TGCATGGCCACCCCAGCACCACCCAGCTGGTGGGAC...TCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAATGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp TACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGATAGTGGGCATGGTCTaGAACATCAACCGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: YARACLQMPACTRMWATVIVGMV*NINRGE
Trigger: CTCCCCACGGTTGATGTTCCAGACCATGCCCACTAT...CACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CACCATTGTCATCGCCTGGACAATTGCAGCACACAGCATTTGAGGAGAGGCAGAGGTTGGAGGTGTGGCTaGTCAGCGTGGAGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: HHCHRLDNCSTQHLRRGRGWRCG*SAWSGG
Trigger: CCCACCGCTCCACGCTGACCAGCCACACCTCCAACC...TCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GTGTGTTCTCTGGAGCCATCACCATTGTCATCGCCTGGACAATTGCAGCACACAGGTTGGAGGTGTGGCTaGTCAGCGTGGAGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: VCSLEPSPLSSPGQLQHTGWRCG*SAWSGG
Trigger: CCCACCGCTCCACGCTGACCAGCCACACCTCCAACC...TGTGTGCTGCAATTGTCCAGGCGATGACAATGGTGATGGCTCCAGAGAACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CACCATTGTCATCGCCTGGACAATTGCAGCACACAGCATTTGAGGAGAGGCAGAGAGGGGCCATGGGGCTaGGGCTGTGAATCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: HHCHRLDNCSTQHLRRGREGPWG*GCESRA
Trigger: TGCACGGGATTCACAGCCCCAGCCCCATGGCCCCTC...TCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAATGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGATGCGGAGGACGTTATaGGGCAGGAGTTTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: ANARVHKNVGHSGTVHWGMRRTL*GRSFEV
Trigger: CACCTCAAAACTCCTGCCCCATAACGTCCTCCGCAT...CCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CTGGAAAGTGGATGCGGAGGACGTTATGGGGCAGGAGTTTTGAGGTGTGGAGAGTGGGAGATGCGGGGCTaGCCTTCCTATGCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: LESGCGGRYGAGVLRCGEWEMRG*PSYASD
Trigger: GTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCA...CTCTCCACACCTCAAAACTCCTGCCCCATAACGTCCTCCGCATCCACTTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp ACTACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGAGATCCACACAGCCCTaGGAGGAGCTTAGACCACTA +
Preference number: 4 (lower is better)
Translates to: TTRERACKCPRAQECGPQRSTQP*EELRPL
Trigger: TAGTGGTCTAAGCTCCTCCCAGGGCTGTGTGGATCT...CTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp CACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCCTTCCCTGGAGTCTCTaGTTCGTGTCCCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: HSGTVHWGKKPQVSNCSSLPWSL*FVSLGS
Trigger: AGACCCCAGGGACACGAAGCAGAGACTCCAGGGAAG...GCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp CACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCGCAAAGGGAGGTCTGTaGTCGGCTTCAGCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: HSGTVHWGKKPQVSNCSSAKGGL*SASAVG
Trigger: GCCAACAGCTGAAGCCGAGCACAGACCTCCCTTTGC...GCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTCCAAAGCCTGCAGGCCGCATGTGCTTGGTGTaGATTCAGATAGGTAACTAC +
Preference number: 4 (lower is better)
Translates to: GCESRAARVTGPLPKPAGRMCLV*IQIGNY
Trigger: GTAGTTACCTATCTGAATGCACACCAAGCACATGCG...GCCTGCAGGCTTTGGAAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GTGTGTTCTCTGGAGCCATCACCATTGTCATCGCCTGGACAATTGCAGCACACAGCCTGGAGCTGCTCTTaGGGCTGGCGGTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VCSLEPSPLSSPGQLQHTAWSCS*GWRLLC
Trigger: ACAGAGCAACCGCCAGCCCCAAGAGCAGCTCCAGGC...TGTGTGCTGCAATTGTCCAGGCGATGACAATGGTGATGGCTCCAGAGAACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp ATCACAGACGCAGAGTGTGCACGCATGTGCTTGGTGTGCATTCAGATAGGTAACAGCTGTCCCACCAGCTaGGTGGTGCTGGGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: ITDAECARMCLVCIQIGNSCPTS*VVLGWP
Trigger: TGGCCACCCCAGCACCACCCAGCTGGTGGGACAGCT...GTTACCTATCTGAATGCACACCAAGCACATGCGTGCACACTCTGCGTCTGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp TGCAGCACACAGCATTTGAGGAGAGGCAGACAACTCGGGAAGTGGGAGGGCCTGATAGTGGGCATGGTCTaGAACATCAACCGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: CSTQHLRRGRQLGKWEGLIVGMV*NINRGE
Trigger: CTCCCCACGGTTGATGTTCCAGACCATGCCCACTAT...CAGGCCCTCCCACTTCCCGAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CATTGTCATCGCCTGGACAATTGCAGCACACAGCATTTGAGGAGAGGCAGACAACCAGCCGAAGAAGGGTaGCAGACTCCAGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: HCHRLDNCSTQHLRRGRQPAEEG*QTPGQG
Trigger: GCCCTGGCCTGGAGTCTGCCACCCTTCTTCGGCTGG...TTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp ATGAATCACAGACGCAGAGTGTGCACGCATGTGCTTGGTGTGCATTCAGATAGGCAGGCCCCGAAGGTCTaGAGAGCCCGTCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: MNHRRRVCTHVLGVHSDRQAPKV*RARPVS
Trigger: GGAGACAGGACGGGCTCTCCAGACCTTCGGGGCCTG...CCTATCTGAATGCACACCAAGCACATGCGTGCACACTCTGCGTCTGTGATTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CACCATTGTCATCGCCTGGACAATTGCAGCACACAGCATTTGAGGAGAGGCAGACTGAGGTTGGAGGTGTaGCTGGTCAGCGTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: HHCHRLDNCSTQHLRRGRLRLEV*LVSVER
Trigger: CCGCTCCACGCTGACCAGCCACACCTCCAACCTCAG...TCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp ATCACAGACGCAGAGTGTGCACGCATGTGCTTGGTGTGCATTCAGATAGGTAACCGTGTCCCTGGGGTCTaGGGGGTGCCTTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: ITDAECARMCLVCIQIGNRVPGV*GVPWLP
Trigger: TGGAAGCCAAGGCACCCCCCAGACCCCAGGGACACG...GTTACCTATCTGAATGCACACCAAGCACATGCGTGCACACTCTGCGTCTGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp CAGAGGCTCATAAATAGCTGGTGTGTTCTCTGGAGCCATCACCATTGTCATCGCCAGGTGCTGTGGGACTaGTGGATGGAAGCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: QRLINSWCVLWSHHHCHRQVLWD*WMEAGP
Trigger: TGGGCCGGCTTCCATCCATCAGTCCCACAGCACCTG...GCGATGACAATGGTGATGGCTCCAGAGAACACACCAGCTATTTATGAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp TGTCATCGCCTGGACAATTGCAGCACACAGCATTTGAGGAGAGGCAGACAACTCTGCCCAGCATCCCCGTaGGTCCCACCAGCAAGATCA +
Preference number: 4 (lower is better)
Translates to: CHRLDNCSTQHLRRGRQLCPASP*VPPARS
Trigger: TGATCTTGCTGGTGGGACTCACGGGGATGCTGGGCA...GAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp AGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCGTGGCAGCACACAGCATTTaGGGAGAGGCAGACAACTCG +
Preference number: 4 (lower is better)
Translates to: SGTVHWGKKPQVSNCSSVAAHSI*GEADNS
Trigger: CGAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGC...CACGCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp CTGGAAAGTGGATGCGGAGGACGTTATGGGGCAGGAGTTTTGAGGTGTGGAGAGGCAGCACACAGCATTTaGGGAGAGGCAGACAACTCG +
Preference number: 4 (lower is better)
Translates to: LESGCGGRYGAGVLRCGEAAHSI*GEADNS
Trigger: CGAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGC...CTCTCCACACCTCAAAACTCCTGCCCCATAACGTCCTCCGCATCCACTTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp CTGGAAAGTGGATGCGGAGGACGTTATGGGGCAGGAGTTTTGAGGTGTGGAGAGGGAAGAAGCCACAGGTaGGTAACTGTTCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: LESGCGGRYGAGVLRCGEGRSHR*VTVPAC
Trigger: GCACGCTGGAACAGTTACTCACCTGTGGCTTCTTCC...CTCTCCACACCTCAAAACTCCTGCCCCATAACGTCCTCCGCATCCACTTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp CAGAGGCTCATAAATAGCTGGTGTGTTCTCTGGAGCCATCACCATTGTCATCGCGAGGGACCGCCCATTTaGTTGCTGGGCAGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: QRLINSWCVLWSHHHCHREGPPI*LLGSSP
Trigger: TGGGGAGCTGCCCAGCAAGCAAATGGGCGGTCCCTC...GCGATGACAATGGTGATGGCTCCAGAGAACACACCAGCTATTTATGAGCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp TCCAGCGTGCAAAGGGAGGTCTGTGCTCGGCTTCAGCTGTTGGCAGTGGGAGATCATCGCCTGGACAATTaGAGCACACAGCATTTGAGG +
Preference number: 4 (lower is better)
Translates to: SSVQREVCARLQLLAVGDHRLDN*STQHLR
Trigger: CCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATG...ATCTCCCACTGCCAACAGCTGAAGCCGAGCACAGACCTCCCTTTGCACGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp CAGATAGGTAACTACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGGAGCGTGCCTGCAAATaGCCGCGTGCACAAGAATGT +
Preference number: 4 (lower is better)
Translates to: QIGNYARACLQMPACTRMERACK*PRAQEC
Trigger: ACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTC...CATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGTTACCTATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp CACCATTGTCATCGCCTGGACAATTGCAGCACACAGCATTTGAGGAGAGGCAGAAACTACGCGAGAGCGTaGCTGCAAATGCCCGCGTGC +
Preference number: 4 (lower is better)
Translates to: HHCHRLDNCSTQHLRRGRNYARA*LQMPAC
Trigger: GCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGTT...TCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GTGTGTTCTCTGGAGCCATCACCATTGTCATCGCCTGGACAATTGCAGCACACAAACTACGCGAGAGCGTaGCTGCAAATGCCCGCGTGC +
Preference number: 4 (lower is better)
Translates to: VCSLEPSPLSSPGQLQHTNYARA*LQMPAC
Trigger: GCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGTT...TGTGTGCTGCAATTGTCCAGGCGATGACAATGGTGATGGCTCCAGAGAACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp TGTCATCGCCTGGACAATTGCAGCACACAGCATTTGAGGAGAGGCAGACAACTCATGCCGCACGCCTCTTaGACGCCACACCAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: CHRLDNCSTQHLRRGRQLMPHAS*TPHQRW
Trigger: CCACCTTTGGTGTGGCGTCCAAGAGGCGTGCGGCAT...GAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CACCATTGTCATCGCCTGGACAATTGCAGCACACAGCATTTGAGGAGAGGCAGAAGCAGCAGAGAAGCATaGTGTAGGCACGCACGGCCG +
Preference number: 4 (lower is better)
Translates to: HHCHRLDNCSTQHLRRGRSSREA*CRHARP
Trigger: CGGCCGTGCGTGCCTACACCATGCTTCTCTGCTGCT...TCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GTGTGTTCTCTGGAGCCATCACCATTGTCATCGCCTGGACAATTGCAGCACACAGAAAGGGAGAGCCAGTaGGCGTCCTACATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: VCSLEPSPLSSPGQLQHTERESQ*ASYILG
Trigger: CCCCAGGATGTAGGACGCCCACTGGCTCTCCCTTTC...TGTGTGCTGCAATTGTCCAGGCGATGACAATGGTGATGGCTCCAGAGAACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp TGTCATCGCCTGGACAATTGCAGCACACAGCATTTGAGGAGAGGCAGACAACTCTTCAGCTGTTGGCAGTaGGAGATGCGGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: CHRLDNCSTQHLRRGRQLFSCWQ*EMRGWP
Trigger: AGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAA...GAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CTGGAAAGTGGATGCGGAGGACGTTATGGGGCAGGAGTTTTGAGGTGTGGAGAGAGTGGAACGGTACACTaGGGGAAGAAGCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: LESGCGGRYGAGVLRCGESGTVH*GKKPQV
Trigger: CACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACT...CTCTCCACACCTCAAAACTCCTGCCCCATAACGTCCTCCGCATCCACTTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CAGATAGGTAACTACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGAGTGGAACGGTACACTaGGGGAAGAAGCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: QIGNYARACLQMPACTRMSGTVH*GKKPQV
Trigger: CACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACT...CATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGTTACCTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR CAA 72 bp CATTGTCATCGCCTGGACAATTGCAGCACACAGCATTaGAGGAGAGGCAGACAACTCGGGAAGTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: HCHRLDNCSTQH*RRGRQLGKWEG
Trigger: GCCCTCCCACTTCCCGAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp CACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCAAGGAGGGTTCATCCTaGGTTGGGATGGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: HSGTVHWGKKPQVSNCSSKEGSS*VGMVLA
Trigger: AGCAAGGACCATCCCAACTCAGGATGAACCCTCCTT...GCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp CAGATAGGTAACTACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGCAGAAGGTATAGATaGCCGTCAGGTTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: QIGNYARACLQMPACTRMCRRYR*PSGCPA
Trigger: TGCTGGGCAACCTGACGGTCATCTATACCTTCTGCA...CATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGTTACCTATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp ATGAATCACAGACGCAGAGTGTGCACGCATGTGCTTGGTGTGCATTCAGATAGGCTTGGGGCTGGCGGTTaGTCTGTGTCTGGTGAAGCG +
Preference number: 4 (lower is better)
Translates to: MNHRRRVCTHVLGVHSDRLGAGG*SVSGEA
Trigger: CGCTTCACCAGACACAGAGCAACCGCCAGCCCCAAG...CCTATCTGAATGCACACCAAGCACATGCGTGCACACTCTGCGTCTGTGATTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp CAGATAGGTAACTACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGAGTTGGGATGGTCCTTaGTCGAGCCCACAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: QIGNYARACLQMPACTRMSWDGP*SSPQRS
Trigger: ACTTCTCTGTGGGCTCGAGCAAGGACCATCCCAACT...CATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGTTACCTATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp CATTGTCATCGCCTGGACAATTGCAGCACACAGCATTTGAGGAGAGGCAGACAAACTCGCCATTGCCCTTaGAGGCCCCGAAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: HCHRLDNCSTQHLRRGRQTRHCP*RPRRSG
Trigger: TCCAGACCTTCGGGGCCTGCAAGGGCAATGGCGAGT...TTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp CATTGTCATCGCCTGGACAATTGCAGCACACAGCATTTGAGGAGAGGCAGACAATCCCCACACAGCTGCTaGCTCCATGTGTGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: HCHRLDNCSTQHLRRGRQSPHSC*LHVCPA
Trigger: GGCTGGACACACATGGAGGCAGCAGCTGTGTGGGGA...TTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp ATCACAGACGCAGAGTGTGCACGCATGTGCTTGGTGTGCATTCAGATAGGTAACCTGGAGATGCTGCTCTaGGAGCTGTCCCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: ITDAECARMCLVCIQIGNLEMLL*ELSHQL
Trigger: CAGCTGGTGGGACAGCTCCCAGAGCAGCATCTCCAG...GTTACCTATCTGAATGCACACCAAGCACATGCGTGCACACTCTGCGTCTGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp GTGTGTTCTCTGGAGCCATCACCATTGTCATCGCCTGGACAATTGCAGCACACACCCCTTGGTCTTCCCTaGAGTCTCTGCTTCGTGTCC +
Preference number: 4 (lower is better)
Translates to: VCSLEPSPLSSPGQLQHTPLGLP*SLCFVS
Trigger: GGACACGAAGCAGAGACTCCAGGGAAGACCAAGGGG...TGTGTGCTGCAATTGTCCAGGCGATGACAATGGTGATGGCTCCAGAGAACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CAGAGGCTCATAAATAGCTGGTGTGTTCTCTGGAGCCATCACCATTGTCATCGCTTCAGCTGTTGGCAGTaGGAGATGCGGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: QRLINSWCVLWSHHHCHRFSCWQ*EMRGWP
Trigger: AGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAA...GCGATGACAATGGTGATGGCTCCAGAGAACACACCAGCTATTTATGAGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CTGGAAAGTGGATGCGGAGGACGTTATGGGGCAGGAGTTTTGAGGTGTGGAGAGAGATCCACACAGCCCTaGGAGGAGCTTAGACCACTA +
Preference number: 4 (lower is better)
Translates to: LESGCGGRYGAGVLRCGERSTQP*EELRPL
Trigger: TAGTGGTCTAAGCTCCTCCCAGGGCTGTGTGGATCT...CTCTCCACACCTCAAAACTCCTGCCCCATAACGTCCTCCGCATCCACTTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp CAGAGGCTCATAAATAGCTGGTGTGTTCTCTGGAGCCATCACCATTGTCATCGCGTATGGAGATCCAGCTaGGGTTGGAGGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QRLINSWCVLWSHHHCHRVWRSS*GWRCGW
Trigger: CCAGCCACACCTCCAACCTCAGCTGGATCTCCATAC...GCGATGACAATGGTGATGGCTCCAGAGAACACACCAGCTATTTATGAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp TGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGCGCATGTGCTTGGTGTaGATTCAGATAGGTAACTAC +
Preference number: 4 (lower is better)
Translates to: CKCPRAQECGPQWNGTLGRMCLV*IQIGNY
Trigger: GTAGTTACCTATCTGAATGCACACCAAGCACATGCG...CCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp CACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGGAGTGTGCACGCATGTaGTTGGTGTGCATTCAGATA +
Preference number: 4 (lower is better)
Translates to: HKNVGHSGTVHWGKKPQVECARM*LVCIQI
Trigger: TATCTGAATGCACACCAAGCACATGCGTGCACACTC...CACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp GTGTGTTCTCTGGAGCCATCACCATTGTCATCGCCTGGACAATTGCAGCACACACCAGCAAGATCACTGTaGCCAGGGTATAGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: VCSLEPSPLSSPGQLQHTPARSL*PGYSGH
Trigger: ATGCCCACTATACCCTGGGCACAGTGATCTTGCTGG...TGTGTGCTGCAATTGTCCAGGCGATGACAATGGTGATGGCTCCAGAGAACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp CATTGTCATCGCCTGGACAATTGCAGCACACAGCATTTGAGGAGAGGCAGACAACACAGACGCAGAGTGTaGACGCATGTGCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: HCHRLDNCSTQHLRRGRQHRRRV*THVLGV
Trigger: CACACCAAGCACATGCGTGCACACTCTGCGTCTGTG...TTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CATTGTCATCGCCTGGACAATTGCAGCACACAGCATTTGAGGAGAGGCAGACAAGGGTTCATCCTGAGTTaGGATGGTCCTTGCTCGAGC +
Preference number: 4 (lower is better)
Translates to: HCHRLDNCSTQHLRRGRQGFILS*DGPCSS
Trigger: GCTCGAGCAAGGACCATCCCAACTCAGGATGAACCC...TTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp ATGAATCACAGACGCAGAGTGTGCACGCATGTGCTTGGTGTGCATTCAGATAGGAAGGAGGGTTCATCCTaGGTTGGGATGGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: MNHRRRVCTHVLGVHSDRKEGSS*VGMVLA
Trigger: AGCAAGGACCATCCCAACTCAGGATGAACCCTCCTT...CCTATCTGAATGCACACCAAGCACATGCGTGCACACTCTGCGTCTGTGATTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR GCA 90 bp CAGAGGCTCATAAATAGCTGGTGTGTTCTCTGGAGCCATCACCATTGTCATCGCCCAGCAAGATCACTGTaGCCAGGGTATAGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: QRLINSWCVLWSHHHCHRPARSL*PGYSGH
Trigger: ATGCCCACTATACCCTGGGCACAGTGATCTTGCTGG...GCGATGACAATGGTGATGGCTCCAGAGAACACACCAGCTATTTATGAGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp CATTGTCATCGCCTGGACAATTGCAGCACACAGCATTTGAGGAGAGGCAGACAAAAGAAGACAGGGGCCTaGGTGAAGGACATGAGGAAG +
Preference number: 4 (lower is better)
Translates to: HCHRLDNCSTQHLRRGRQKKTGA*VKDMRK
Trigger: CTTCCTCATGTCCTTCACCCAGGCCCCTGTCTTCTT...TTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp TGTCATCGCCTGGACAATTGCAGCACACAGCATTTGAGGAGAGGCAGACAACTCACCATTGTCATCGCCTaGACAATTGCAGCACACAGC +
Preference number: 4 (lower is better)
Translates to: CHRLDNCSTQHLRRGRQLTIVIA*TIAAHS
Trigger: GCTGTGTGCTGCAATTGTCCAGGCGATGACAATGGT...GAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
3UTR CAA 72 bp TCTCTGGAGCCATCACCATTGTCATCGCCTGGACAATaGCAGCACACAGCATTTGAGGAGAGGCAGACAACT +
Preference number: 4 (lower is better)
Translates to: SLEPSPLSSPGQ*QHTAFEERQTT
Trigger: AGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAATGGTGATGGCTCCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CCA 90 bp ATCACAGACGCAGAGTGTGCACGCATGTGCTTGGTGTGCATTCAGATAGGTAACACCATTGTCATCGCCTaGACAATTGCAGCACACAGC +
Preference number: 4 (lower is better)
Translates to: ITDAECARMCLVCIQIGNTIVIA*TIAAHS
Trigger: GCTGTGTGCTGCAATTGTCCAGGCGATGACAATGGT...GTTACCTATCTGAATGCACACCAAGCACATGCGTGCACACTCTGCGTCTGTGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR TCA 90 bp CATTGTCATCGCCTGGACAATTGCAGCACACAGCATTTGAGGAGAGGCAGACAAGACCACTACATGAAATaGATCACAGACGCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: HCHRLDNCSTQHLRRGRQDHYMK*ITDAEC
Trigger: ACACTCTGCGTCTGTGATTCATTTCATGTAGTGGTC...TTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS GCA 90 bp CGCTCTGCAGCCGCTGCCGCTGCCACAGGGACTCGCCATTGCCCTTaGAGGCCCCGAAGGTCTGGAGAGCCCGTCCTGTCTCCCGGATGG +
Preference number: 5 (lower is better)
Translates to: RSAAAAAATGTRHCP*RPRRSGEPVLSPGW
Trigger: CCATCCGGGAGACAGGACGGGCTCTCCAGACCTTCGGGGCCTGCAAGGGCAATGGCGAGTCCCTGTGGCAGCGGCAGCGGCTGCAGAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CCA 90 bp TGGAGGTGTGGCTGGTCAGCGTGGAGCGGTGGGTGGAGCGGTAGCTaGGGTAGGGGCGACTGTGCCGGCGTGATACACCCAGCAGCACCC +
Preference number: 5 (lower is better)
Translates to: WRCGWSAWSGGWSGS*GRGDCAGVIHPAAP
Trigger: GGGTGCTGCTGGGTGTATCACGCCGGCACAGTCGCCCCTACCCCAGCTACCGCTCCACCCACCGCTCCACGCTGACCAGCCACACCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS-3UTR CAA 90 bp GAAGTGGGAGGGCCTGGGCACATACCCCTCAGGCTGAGCCTCGGGTGCGGCTGCAGCCTGGAGCTGCTCTaGGGGCTGGCGGTTGCTCTG +
Preference number: 5 (lower is better)
Translates to: EVGGPGHIPLRLSLGCGCSLELL*GLAVAL
Trigger: CAGAGCAACCGCCAGCCCCAAGAGCAGCTCCAGGCT...GCAGCCGCACCCGAGGCTCAGCCTGAGGGGTATGTGCCCAGGCCCTCCCACTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp GAAGTGGGAGGGCCTGGGCACATACCCCTCAGGCTGAGCCTCGGGTGCGGCTGCGACTCGCCATTGCCCTaGCAGGCCCCGAAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: EVGGPGHIPLRLSLGCGCDSPLP*QAPKVW
Trigger: CCAGACCTTCGGGGCCTGCAAGGGCAATGGCGAGTC...GCAGCCGCACCCGAGGCTCAGCCTGAGGGGTATGTGCCCAGGCCCTCCCACTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp GAAGTGGGAGGGCCTGGGCACATACCCCTCAGGCTGAGCCTCGGGTGCGGCTGCCACAGGGACTCGCCATaGCCCTTGCAGGCCCCGAAG +
Preference number: 5 (lower is better)
Translates to: EVGGPGHIPLRLSLGCGCHRDSP*PLQAPK
Trigger: CTTCGGGGCCTGCAAGGGCAATGGCGAGTCCCTGTG...GCAGCCGCACCCGAGGCTCAGCCTGAGGGGTATGTGCCCAGGCCCTCCCACTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp GAAGTGGGAGGGCCTGGGCACATACCCCTCAGGCTGAGCCTCGGGTGCGGCTGCGGACCGCCCATTTGCTaGCTGGGCAGCTCCCCACAC +
Preference number: 5 (lower is better)
Translates to: EVGGPGHIPLRLSLGCGCGPPIC*LGSSPH
Trigger: GTGTGGGGAGCTGCCCAGCAAGCAAATGGGCGGTCC...GCAGCCGCACCCGAGGCTCAGCCTGAGGGGTATGTGCCCAGGCCCTCCCACTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp GGGCCATGGGGCTGGGGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTCACAGGGACTCGCCATaGCCCTTGCAGGCCCCGAAG +
Preference number: 5 (lower is better)
Translates to: GPWGWGCESRAARVTGPLHRDSP*PLQAPK
Trigger: CTTCGGGGCCTGCAAGGGCAATGGCGAGTCCCTGTG...AAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCCCCAGCCCCATGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp CCATGGGGCTGGGGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTCCAAGCCTGGAGCTGCTCTaGGGGCTGGCGGTTGCTCTG +
Preference number: 5 (lower is better)
Translates to: PWGWGCESRAARVTGPLPSLELL*GLAVAL
Trigger: CAGAGCAACCGCCAGCCCCAAGAGCAGCTCCAGGCT...TGGAAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCCCCAGCCCCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp GAAGTGGGAGGGCCTGGGCACATACCCCTCAGGCTGAGCCTCGGGTGCGGCTGCGAGATCCAGCTGAGGTaGGAGGTGTGGCTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: EVGGPGHIPLRLSLGCGCEIQLR*EVWLVS
Trigger: GCTGACCAGCCACACCTCCAACCTCAGCTGGATCTC...GCAGCCGCACCCGAGGCTCAGCCTGAGGGGTATGTGCCCAGGCCCTCCCACTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS GCA 90 bp CAGACTCCAGGCCAGGGCATAGAGCCAAACGCCCAGCAGGACAAATaGCGCACGCCTCTTGGACGCCACACCAAAGGTGGCCAGCGGGCG +
Preference number: 5 (lower is better)
Translates to: QTPGQGIEPNAQQDK*RTPLGRHTKGGQRA
Trigger: CGCCCGCTGGCCACCTTTGGTGTGGCGTCCAAGAGGCGTGCGGCATTTGTCCTGCTGGGCGTTTGGCTCTATGCCCTGGCCTGGAGTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS-3UTR CAA 90 bp GGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTCCAAAGCCTGCAGGCAGCTGGGCTCTTGGGTaGGGCTGGGCGGGACTCTTG +
Preference number: 5 (lower is better)
Translates to: GCESRAARVTGPLPKPAGSWALG*GWAGLL
Trigger: CAAGAGTCCCGCCCAGCCCAACCCAAGAGCCCAGCT...GCCTGCAGGCTTTGGAAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp GGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTCCAAAGCCTGCAGGCGACTCGCCATTGCCCTaGCAGGCCCCGAAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: GCESRAARVTGPLPKPAGDSPLP*QAPKVW
Trigger: CCAGACCTTCGGGGCCTGCAAGGGCAATGGCGAGTC...GCCTGCAGGCTTTGGAAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp CCATGGGGCTGGGGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTCCATGGATTGCAGAGGCCTaGGCGATGACGGCTGGCACC +
Preference number: 5 (lower is better)
Translates to: PWGWGCESRAARVTGPLPWIAEA*AMTAGT
Trigger: GGTGCCAGCCGTCATCGCCAAGGCCTCTGCAATCCA...TGGAAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCCCCAGCCCCATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS GCA 90 bp ACCAGCAGCATGATCTTGGCCATCTTGCACTCGCTCTGCAGCCGCTaGCGCTGCCACAGGGACTCGCCATTGCCCTTGCAGGCCCCGAAG +
Preference number: 5 (lower is better)
Translates to: TSSMILAILHSLCSR*RCHRDSPLPLQAPK
Trigger: CTTCGGGGCCTGCAAGGGCAATGGCGAGTCCCTGTGGCAGCGGCAGCGGCTGCAGAGCGAGTGCAAGATGGCCAAGATCATGCTGCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS GCA 90 bp GTAGAGGGACCGCCCATTTGCTTGCTGGGCAGCTCCCCACACAGCTaGTGCCTCCATGTGTGTCCAGCCCACCTCACTCTCCGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: VEGPPICLLGSSPHS*CLHVCPAHLTLRAQ
Trigger: CTGGGCTCGGAGAGTGAGGTGGGCTGGACACACATGGAGGCAGCAGCTGTGTGGGGAGCTGCCCAGCAAGCAAATGGGCGGTCCCTCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CCA 90 bp GGTGGCCATGCAGCTGGGCTCTTGGGTTGGGCTGGGCGGGACTCTTaGCCCCGAAGGAGGGTTCATCCTGAGTTGGGATGGTCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: GGHAAGLLGWAGRDS*PRRRVHPELGWSLL
Trigger: GAGCAAGGACCATCCCAACTCAGGATGAACCCTCCTTCGGGGCCAAGAGTCCCGCCCAGCCCAACCCAAGAGCCCAGCTGCATGGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CCA 90 bp CGCTGCCACAGGGACTCGCCATTGCCCTTGCAGGCCCCGAAGGTCTaGAGAGCCCGTCCTGTCTCCCGGATGGCCCTGAAGATGAAGATG +
Preference number: 5 (lower is better)
Translates to: RCHRDSPLPLQAPKV*RARPVSRMALKMKM
Trigger: CATCTTCATCTTCAGGGCCATCCGGGAGACAGGACGGGCTCTCCAGACCTTCGGGGCCTGCAAGGGCAATGGCGAGTCCCTGTGGCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS-3UTR CAA 90 bp TACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGGCTGGGCGGGACTCTaGGCCCCGAAGGAGGGTTCA +
Preference number: 5 (lower is better)
Translates to: YARACLQMPACTRMWATVGWAGL*APKEGS
Trigger: TGAACCCTCCTTCGGGGCCAAGAGTCCCGCCCAGCC...CACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp GGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCAGCCTGGATGATCTTGGCCATCTaGCACTCGCTCTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: GSGRCGAGLPMPVTGPAWMILAI*HSLCSR
Trigger: GCGGCTGCAGAGCGAGTGCAAGATGGCCAAGATCAT...CCAGGCTGGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp AGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGGCCCTGGATTGCAGAGGCCTaGGCGATGACGGCTGGCACC +
Preference number: 5 (lower is better)
Translates to: SCWQWEMRGWPSYASDRPWIAEA*AMTAGT
Trigger: GGTGCCAGCCGTCATCGCCAAGGCCTCTGCAATCCA...GGGCCTGTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp GGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACAGAGGGACCGCCCATTaGCTTGCTGGGCAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: GFSCWQWEMRGWPSYASDRGTAH*LAGQLP
Trigger: GGGGAGCTGCCCAGCAAGCAAATGGGCGGTCCCTCT...GTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS TCA 90 bp GGGTTGGGCTGGGCGGGACTCTTGGCCCCGAAGGAGGGTTCATCCTaGGTTGGGATGGTCCTTGCTCGAGCCCACAGAGAAGTCAAGGGC +
Preference number: 5 (lower is better)
Translates to: GLGWAGLLAPKEGSS*VGMVLARAHREVKG
Trigger: GCCCTTGACTTCTCTGTGGGCTCGAGCAAGGACCATCCCAACTCAGGATGAACCCTCCTTCGGGGCCAAGAGTCCCGCCCAGCCCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CCA 90 bp GGGCTGGGCGGGACTCTTGGCCCCGAAGGAGGGTTCATCCTGAGTTaGGATGGTCCTTGCTCGAGCCCACAGAGAAGTCAAGGGCACAGG +
Preference number: 5 (lower is better)
Translates to: GLGGTLGPEGGFILS*DGPCSSPQRSQGHR
Trigger: CCTGTGCCCTTGACTTCTCTGTGGGCTCGAGCAAGGACCATCCCAACTCAGGATGAACCCTCCTTCGGGGCCAAGAGTCCCGCCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CCA 90 bp TCACTGTGCCCAGGGTATAGTGGGCATGGTCTGGAACATCAACCGTaGGGAGGGGGACCCAGGCAGCAGCCCAAGTCCCAGGTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: SLCPGYSGHGLEHQP*GGGPRQQPKSQVLW
Trigger: CCACAGCACCTGGGACTTGGGCTGCTGCCTGGGTCCCCCTCCCCACGGTTGATGTTCCAGACCATGCCCACTATACCCTGGGCACAGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CCA 90 bp TCCATGTGTGTCCAGCCCACCTCACTCTCCGAGCCCAGGGACTCCTaGCGCCTCCGTATGGAGATCCAGCTGAGGTTGGAGGTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: SMCVQPTSLSEPRDS*RLRMEIQLRLEVWL
Trigger: CAGCCACACCTCCAACCTCAGCTGGATCTCCATACGGAGGCGCCAGGAGTCCCTGGGCTCGGAGAGTGAGGTGGGCTGGACACACATGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS-3UTR CAA 90 bp CCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCAGAGGGACCGCCCATTaGCTTGCTGGGCAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: PACTRMWATVERYTGGRSRGTAH*LAGQLP
Trigger: GGGGAGCTGCCCAGCAAGCAAATGGGCGGTCCCTCT...GCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp GGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTCCAAAGCCTGCAGGCCTGGGGATCAGCCCCTaGGTCTTCCCTGGAGTCTCT +
Preference number: 5 (lower is better)
Translates to: GCESRAARVTGPLPKPAGLGISP*VFPGVS
Trigger: AGAGACTCCAGGGAAGACCAAGGGGCTGATCCCCAG...GCCTGCAGGCTTTGGAAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp CGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGCTCGGCTTCAGCTGTaGGCAGTGGGAGATGCGGGG +
Preference number: 5 (lower is better)
Translates to: RERACKCPRAQECGPQWNARLQL*AVGDAG
Trigger: CCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAGC...GTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS GCA 90 bp AGGAGGATGACCAGCAGCATGATCTTGGCCATCTTGCACTCGCTCTaGAGCCGCTGCCGCTGCCACAGGGACTCGCCATTGCCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: RRMTSSMILAILHSL*SRCRCHRDSPLPLQ
Trigger: CTGCAAGGGCAATGGCGAGTCCCTGTGGCAGCGGCAGCGGCTGCAGAGCGAGTGCAAGATGGCCAAGATCATGCTGCTGGTCATCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS GCA 90 bp GGCTTCCAAGTCCTCCAGACCCTGACCGTAGAGGGACCGCCCATTTaGTTGCTGGGCAGCTCCCCACACAGCTGCTGCCTCCATGTGTGT +
Preference number: 5 (lower is better)
Translates to: GFQVLQTLTVEGPPI*LLGSSPHSCCLHVC
Trigger: ACACACATGGAGGCAGCAGCTGTGTGGGGAGCTGCCCAGCAAGCAAATGGGCGGTCCCTCTACGGTCAGGGTCTGGAGGACTTGGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CCA 90 bp GGGCGGGACTCTTGGCCCCGAAGGAGGGTTCATCCTGAGTTGGGATaGTCCTTGCTCGAGCCCACAGAGAAGTCAAGGGCACAGGGAGCT +
Preference number: 5 (lower is better)
Translates to: GRDSWPRRRVHPELG*SLLEPTEKSRAQGA
Trigger: AGCTCCCTGTGCCCTTGACTTCTCTGTGGGCTCGAGCAAGGACCATCCCAACTCAGGATGAACCCTCCTTCGGGGCCAAGAGTCCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS-3UTR CAA 90 bp TCCAGCGTGCAAAGGGAGGTCTGTGCTCGGCTTCAGCTGTTGGCAGTGGGAGATGGACCGCCCATTTGCTaGCTGGGCAGCTCCCCACAC +
Preference number: 5 (lower is better)
Translates to: SSVQREVCARLQLLAVGDGPPIC*LGSSPH
Trigger: GTGTGGGGAGCTGCCCAGCAAGCAAATGGGCGGTCC...ATCTCCCACTGCCAACAGCTGAAGCCGAGCACAGACCTCCCTTTGCACGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS TCA 90 bp ACACGAAGCAGCAGAGAAGCATGGTGTAGGCACGCACGGCCGGCGTaGAGCTCATGTAGTCCCAGGAGCAGGATGTCAGCAACCCCTCGG +
Preference number: 5 (lower is better)
Translates to: TRSSREAWCRHARPA*SSCSPRSRMSATPR
Trigger: CCGAGGGGTTGCTGACATCCTGCTCCTGGGACTACATGAGCTTCACGCCGGCCGTGCGTGCCTACACCATGCTTCTCTGCTGCTTCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS-3UTR CAA 90 bp GGCTGTGAATCCCGTGCAGCACGGGTGACAGGGCCACTTCCAAAGCCTGCAGGCAGGGTTCATCCTGAGTaGGGATGGTCCTTGCTCGAG +
Preference number: 5 (lower is better)
Translates to: GCESRAARVTGPLPKPAGRVHPE*GWSLLE
Trigger: CTCGAGCAAGGACCATCCCAACTCAGGATGAACCCT...GCCTGCAGGCTTTGGAAGTGGCCCTGTCACCCGTGCTGCACGGGATTCACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS CCA 90 bp GATGTGTCTCAGAAGAAAGGGAGAGCCAGTGGGCGTCCTACATCCTaGGGTCCTGGCTGGGGATCAGCCCCTTGGTCTTCCCTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: DVSQKKGRASGRPTS*GPGWGSAPWSSLES
Trigger: AGACTCCAGGGAAGACCAAGGGGCTGATCCCCAGCCAGGACCCCAGGATGTAGGACGCCCACTGGCTCTCCCTTTCTTCTGAGACACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp TCGGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGAGGGTTCATCCTGAGTaGGGATGGTCCTTGCTCGAG +
Preference number: 5 (lower is better)
Translates to: SASAVGSGRCGAGLPMPVRVHPE*GWSLLE
Trigger: CTCGAGCAAGGACCATCCCAACTCAGGATGAACCCT...CACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp TCCAGCGTGCAAAGGGAGGTCTGTGCTCGGCTTCAGCTGTTGGCAGTGGGAGATAATGCCGCACGCCTCTaGGACGCCACACCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: SSVQREVCARLQLLAVGDNAARL*DATPKV
Trigger: CACCTTTGGTGTGGCGTCCAAGAGGCGTGCGGCATT...ATCTCCCACTGCCAACAGCTGAAGCCGAGCACAGACCTCCCTTTGCACGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp TCCAGCGTGCAAAGGGAGGTCTGTGCTCGGCTTCAGCTGTTGGCAGTGGGAGATCTGGGGATCAGCCCCTaGGTCTTCCCTGGAGTCTCT +
Preference number: 5 (lower is better)
Translates to: SSVQREVCARLQLLAVGDLGISP*VFPGVS
Trigger: AGAGACTCCAGGGAAGACCAAGGGGCTGATCCCCAG...ATCTCCCACTGCCAACAGCTGAAGCCGAGCACAGACCTCCCTTTGCACGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp ACTACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTATGGGGCAGGAGTTTaGAGGTGTGGAGAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: TTRERACKCPRAQECGPQYGAGV*RCGEGP
Trigger: TGGCCCCTCTCCACACCTCAAAACTCCTGCCCCATA...CTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp CTGGAAAGTGGATGCGGAGGACGTTATGGGGCAGGAGTTTTGAGGTGTGGAGAGGCTCGGCTTCAGCTGTaGGCAGTGGGAGATGCGGGG +
Preference number: 5 (lower is better)
Translates to: LESGCGGRYGAGVLRCGEARLQL*AVGDAG
Trigger: CCCCGCATCTCCCACTGCCAACAGCTGAAGCCGAGC...CTCTCCACACCTCAAAACTCCTGCCCCATAACGTCCTCCGCATCCACTTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS GCA 90 bp CCTGTACTTGGGGTGGGTGATGGCGTAAATGATGGGGTTGTGGATTaGAGAGGCCTTGGCGATGACGGCTGGCACCGAGCTCATGTAGGG +
Preference number: 5 (lower is better)
Translates to: PVLGVGDGVNDGVVD*RGLGDDGWHRAHVG
Trigger: CCCTACATGAGCTCGGTGCCAGCCGTCATCGCCAAGGCCTCTGCAATCCACAACCCCATCATTTACGCCATCACCCACCCCAAGTACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CCA 90 bp GTAAATGATGGGGTTGTGGATTGCAGAGGCCTTGGCGATGACGGCTaGCACCGAGCTCATGTAGGGTGTCAGGACGTGTGCGTACCCAGC +
Preference number: 5 (lower is better)
Translates to: VNDGVVDCRGLGDDG*HRAHVGCQDVCVPS
Trigger: GCTGGGTACGCACACGTCCTGACACCCTACATGAGCTCGGTGCCAGCCGTCATCGCCAAGGCCTCTGCAATCCACAACCCCATCATTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS-3UTR CAA 90 bp CAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGAATGCCGCACGCCTCTaGGACGCCACACCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: QECGPQWNGTLGEEATGENAARL*DATPKV
Trigger: CACCTTTGGTGTGGCGTCCAAGAGGCGTGCGGCATT...CTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp CATTGTCATCGCCTGGACAATTGCAGCACACAGCATTTGAGGAGAGGCAGACAAGGCTGGGCGGGACTCTaGGCCCCGAAGGAGGGTTCA +
Preference number: 5 (lower is better)
Translates to: HCHRLDNCSTQHLRRGRQGWAGL*APKEGS
Trigger: TGAACCCTCCTTCGGGGCCAAGAGTCCCGCCCAGCC...TTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp TGTCATCGCCTGGACAATTGCAGCACACAGCATTTGAGGAGAGGCAGACAACTCAGCTGGGCTCTTGGGTaGGGCTGGGCGGGACTCTTG +
Preference number: 5 (lower is better)
Translates to: CHRLDNCSTQHLRRGRQLSWALG*GWAGLL
Trigger: CAAGAGTCCCGCCCAGCCCAACCCAAGAGCCCAGCT...GAGTTGTCTGCCTCTCCTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp CAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGATGATCTTGGCCATCTaGCACTCGCTCTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: QECGPQWNGTLGEEATGEMILAI*HSLCSR
Trigger: GCGGCTGCAGAGCGAGTGCAAGATGGCCAAGATCAT...CTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp CACAGTGGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCGAGATCCAGCTGAGGTaGGAGGTGTGGCTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: HSGTVHWGKKPQVSNCSSEIQLR*EVWLVS
Trigger: GCTGACCAGCCACACCTCCAACCTCAGCTGGATCTC...GCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCCACTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp CCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGAAGAAGCCTGGAGCCATCACCATaGTCATCGCCTGGACAATTG +
Preference number: 5 (lower is better)
Translates to: PACTRMWATVERYTGGRSLEPSP*SSPGQL
Trigger: CAATTGTCCAGGCGATGACAATGGTGATGGCTCCAG...GCTTCTTCCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp GCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTGGAACGGTACACTGGGGGCTGGAGCCATCACCATaGTCATCGCCTGGACAATTG +
Preference number: 5 (lower is better)
Translates to: ANARVHKNVGHSGTVHWGLEPSP*SSPGQL
Trigger: CAATTGTCCAGGCGATGACAATGGTGATGGCTCCAG...CCCCCAGTGTACCGTTCCACTGTGGCCCACATTCTTGTGCACGCGGGCATTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp GGCTTCAGCTGTTGGCAGTGGGAGATGCGGGGCTGGCCTTCCTATGCCAGTGACTGTGCACGCATGTGCTaGGTGTGCATTCAGATAGGT +
Preference number: 5 (lower is better)
Translates to: GFSCWQWEMRGWPSYASDCARMC*VCIQIG
Trigger: ACCTATCTGAATGCACACCAAGCACATGCGTGCACA...GTCACTGGCATAGGAAGGCCAGCCCCGCATCTCCCACTGCCAACAGCTGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp CAGATAGGTAACTACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGGAGTTGGGATGGTCCTaGCTCGAGCCCACAGAGAAG +
Preference number: 5 (lower is better)
Translates to: QIGNYARACLQMPACTRMELGWS*LEPTEK
Trigger: CTTCTCTGTGGGCTCGAGCAAGGACCATCCCAACTC...CATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGTTACCTATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp CTGGAAAGTGGATGCGGAGGACGTTATGGGGCAGGAGTTTTGAGGTGTGGAGAGTATGGGGCAGGAGTTTaGAGGTGTGGAGAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: LESGCGGRYGAGVLRCGEYGAGV*RCGEGP
Trigger: TGGCCCCTCTCCACACCTCAAAACTCCTGCCCCATA...CTCTCCACACCTCAAAACTCCTGCCCCATAACGTCCTCCGCATCCACTTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp ACTACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGGGCCACAGTCATCGCCTGGACAATaGCAGCACACAGCATTTGAG +
Preference number: 5 (lower is better)
Translates to: TTRERACKCPRAQECGPQSSPGQ*QHTAFE
Trigger: CTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGA...CTGTGGCCCACATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp GGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCGTGCAAACCAGCAGCATGATCTaGGCCATCTTGCACTCGCTC +
Preference number: 5 (lower is better)
Translates to: GTVHWGKKPQVSNCSSVQTSSMI*AILHSL
Trigger: GAGCGAGTGCAAGATGGCCAAGATCATGCTGCTGGT...TTGCACGCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp CAGATAGGTAACTACGCGAGAGCGTGCCTGCAAATGCCCGCGTGCACAAGAATGTGTGCACGCATGTGCTaGGTGTGCATTCAGATAGGT +
Preference number: 5 (lower is better)
Translates to: QIGNYARACLQMPACTRMCARMC*VCIQIG
Trigger: ACCTATCTGAATGCACACCAAGCACATGCGTGCACA...CATTCTTGTGCACGCGGGCATTTGCAGGCACGCTCTCGCGTAGTTACCTATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp GGAACGGTACACTGGGGGAAGAAGCCACAGGTGAGTAACTGTTCCAGCGTGCAATTGATAATGAACATGTaGGCAGGTGTCCGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: GTVHWGKKPQVSNCSSVQLIMNM*AGVRRL
Trigger: AAGCCTCCGGACACCTGCCAACATGTTCATTATCAA...TTGCACGCTGGAACAGTTACTCACCTGTGGCTTCTTCCCCCAGTGTACCGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS-3UTR CAA 90 bp CTGGAAAGTGGATGCGGAGGACGTTATGGGGCAGGAGTTTTGAGGTGTGGAGAGTTGATAATGAACATGTaGGCAGGTGTCCGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: LESGCGGRYGAGVLRCGELIMNM*AGVRRL
Trigger: AAGCCTCCGGACACCTGCCAACATGTTCATTATCAA...CTCTCCACACCTCAAAACTCCTGCCCCATAACGTCCTCCGCATCCACTTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS GCA 90 bp AGGTTGATAATGAACATGTTGGCAGGTGTCCGGAGGCTTCTGCTCTaGATCATCACAGTGACTCCACGAAGCACAGCTCTGCAGAAGGTA +
Preference number: 5 (lower is better)
Translates to: RLIMNMLAGVRRLLL*IITVTPRSTALQKV
Trigger: TACCTTCTGCAGAGCTGTGCTTCGTGGAGTCACTGTGATGATGCAGAGCAGAAGCCTCCGGACACCTGCCAACATGTTCATTATCAACCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372071.6
ENST00000443292.1
CDS-3UTR CAA 90 bp ATGAATCACAGACGCAGAGTGTGCACGCATGTGCTTGGTGTGCATTCAGATAGGTCATCGCCTGGACAATaGCAGCACACAGCATTTGAG +
Preference number: 5 (lower is better)
Translates to: MNHRRRVCTHVLGVHSDRSSPGQ*QHTAFE
Trigger: CTCAAATGCTGTGTGCTGCAATTGTCCAGGCGATGA...CCTATCTGAATGCACACCAAGCACATGCGTGCACACTCTGCGTCTGTGATTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS CCA 72 bp GGTTGGAGGTGTGGCTGGTCAGCGTGGAGCGGTGGGTaGAGCGGTAGCTGGGGTAGGGGCGACTGTGCCGGC +
Preference number: 6 (lower is better)
Translates to: GWRCGWSAWSGG*SGSWGRGDCAG
Trigger: GCCGGCACAGTCGCCCCTACCCCAGCTACCGCTCCACCCACCGCTCCACGCTGACCAGCCACACCTCCAACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS GCA 72 bp GCCGCTGCCGCTGCCACAGGGACTCGCCATTGCCCTTaGAGGCCCCGAAGGTCTGGAGAGCCCGTCCTGTCT +
Preference number: 6 (lower is better)
Translates to: AAAAATGTRHCP*RPRRSGEPVLS
Trigger: AGACAGGACGGGCTCTCCAGACCTTCGGGGCCTGCAAGGGCAATGGCGAGTCCCTGTGGCAGCGGCAGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CCA 72 bp GGCTGGTCAGCGTGGAGCGGTGGGTGGAGCGGTAGCTaGGGTAGGGGCGACTGTGCCGGCGTGATACACCCA +
Preference number: 6 (lower is better)
Translates to: GWSAWSGGWSGS*GRGDCAGVIHP
Trigger: TGGGTGTATCACGCCGGCACAGTCGCCCCTACCCCAGCTACCGCTCCACCCACCGCTCCACGCTGACCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CCA 72 bp CCCCTCGGGCACGTAGGCGCTCCAGCCGAAGAAGGGTaGCAGACTCCAGGCCAGGGCATAGAGCCAAACGCC +
Preference number: 6 (lower is better)
Translates to: PLGHVGAPAEEG*QTPGQGIEPNA
Trigger: GGCGTTTGGCTCTATGCCCTGGCCTGGAGTCTGCCACCCTTCTTCGGCTGGAGCGCCTACGTGCCCGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS GCA 72 bp GTCCTCCAGACCCTGACCGTAGAGGGACCGCCCATTTaGTTGCTGGGCAGCTCCCCACACAGCTGCTGCCTC +
Preference number: 6 (lower is better)
Translates to: VLQTLTVEGPPI*LLGSSPHSCCL
Trigger: GAGGCAGCAGCTGTGTGGGGAGCTGCCCAGCAAGCAAATGGGCGGTCCCTCTACGGTCAGGGTCTGGAGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CCA 72 bp GCAGCTGGGCTCTTGGGTTGGGCTGGGCGGGACTCTTaGCCCCGAAGGAGGGTTCATCCTGAGTTGGGATGG +
Preference number: 6 (lower is better)
Translates to: AAGLLGWAGRDS*PRRRVHPELGW
Trigger: CCATCCCAACTCAGGATGAACCCTCCTTCGGGGCCAAGAGTCCCGCCCAGCCCAACCCAAGAGCCCAGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CAA 72 bp AGCCAAACGCCCAGCAGGACAAATGCCGCACGCCTCTaGGACGCCACACCAAAGGTGGCCAGCGGGCGTGTG +
Preference number: 6 (lower is better)
Translates to: SQTPSRTNAARL*DATPKVASGRV
Trigger: CACACGCCCGCTGGCCACCTTTGGTGTGGCGTCCAAGAGGCGTGCGGCATTTGTCCTGCTGGGCGTTTGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CAA 72 bp GACTCCTGGCGCCTCCGTATGGAGATCCAGCTGAGGTaGGAGGTGTGGCTGGTCAGCGTGGAGCGGTGGGTG +
Preference number: 6 (lower is better)
Translates to: DSWRLRMEIQLR*EVWLVSVERWV
Trigger: CACCCACCGCTCCACGCTGACCAGCCACACCTCCAACCTCAGCTGGATCTCCATACGGAGGCGCCAGGAGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS GCA 72 bp GGCCAGGGCATAGAGCCAAACGCCCAGCAGGACAAATaGCGCACGCCTCTTGGACGCCACACCAAAGGTGGC +
Preference number: 6 (lower is better)
Translates to: GQGIEPNAQQDK*RTPLGRHTKGG
Trigger: GCCACCTTTGGTGTGGCGTCCAAGAGGCGTGCGGCATTTGTCCTGCTGGGCGTTTGGCTCTATGCCCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS GCA 72 bp CCGCCCATTTGCTTGCTGGGCAGCTCCCCACACAGCTaGTGCCTCCATGTGTGTCCAGCCCACCTCACTCTC +
Preference number: 6 (lower is better)
Translates to: PPICLLGSSPHS*CLHVCPAHLTL
Trigger: GAGAGTGAGGTGGGCTGGACACACATGGAGGCAGCAGCTGTGTGGGGAGCTGCCCAGCAAGCAAATGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CCA 72 bp AGCAGCCCAAGTCCCAGGTGCTGTGGGACTGATGGATaGAAGCCGGCCCAGGCTGGAGATGCTGCTCTGGGA +
Preference number: 6 (lower is better)
Translates to: SSPSPRCCGTDG*KPAQAGDAALG
Trigger: TCCCAGAGCAGCATCTCCAGCCTGGGCCGGCTTCCATCCATCAGTCCCACAGCACCTGGGACTTGGGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CCA 72 bp CCAGGGTATAGTGGGCATGGTCTGGAACATCAACCGTaGGGAGGGGGACCCAGGCAGCAGCCCAAGTCCCAG +
Preference number: 6 (lower is better)
Translates to: PGYSGHGLEHQP*GGGPRQQPKSQ
Trigger: CTGGGACTTGGGCTGCTGCCTGGGTCCCCCTCCCCACGGTTGATGTTCCAGACCATGCCCACTATACCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CCA 72 bp AGAGCCAGTGGGCGTCCTACATCCTGGGGTCCTGGCTaGGGATCAGCCCCTTGGTCTTCCCTGGAGTCTCTG +
Preference number: 6 (lower is better)
Translates to: RASGRPTSWGPG*GSAPWSSLESL
Trigger: CAGAGACTCCAGGGAAGACCAAGGGGCTGATCCCCAGCCAGGACCCCAGGATGTAGGACGCCCACTGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241891.10
ENST00000372071.6
CDS CAA 72 bp CTCCAGACCCTGACCGTAGAGGGACCGCCCATTTGCTaGCTGGGCAGCTCCCCACACAGCTGCTGCCTCCAT +
Preference number: 6 (lower is better)
Translates to: LQTLTVEGPPIC*LGSSPHSCCLH
Trigger: ATGGAGGCAGCAGCTGTGTGGGGAGCTGCCCAGCAAGCAAATGGGCGGTCCCTCTACGGTCAGGGTCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CAA 72 bp AGTCCTCCAGACCCTGACCGTAGAGGGACCGCCCATTaGCTTGCTGGGCAGCTCCCCACACAGCTGCTGCCT +
Preference number: 6 (lower is better)
Translates to: SPPDPDRRGTAH*LAGQLPTQLLP
Trigger: AGGCAGCAGCTGTGTGGGGAGCTGCCCAGCAAGCAAATGGGCGGTCCCTCTACGGTCAGGGTCTGGAGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CAA 90 bp TGGGCTGGGCGGGACTCTTGGCCCCGAAGGAGGGTTCATCCTGAGTaGGGATGGTCCTTGCTCGAGCCCACAGAGAAGTCAAGGGCACAG +
Preference number: 6 (lower is better)
Translates to: WAGRDSWPRRRVHPE*GWSLLEPTEKSRAQ
Trigger: CTGTGCCCTTGACTTCTCTGTGGGCTCGAGCAAGGACCATCCCAACTCAGGATGAACCCTCCTTCGGGGCCAAGAGTCCCGCCCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CAA 90 bp GAGAGCACGAAGAGGAGGATGACCAGCAGCATGATCTTGGCCATCTaGCACTCGCTCTGCAGCCGCTGCCGCTGCCACAGGGACTCGCCA +
Preference number: 6 (lower is better)
Translates to: ESTKRRMTSSMILAI*HSLCSRCRCHRDSP
Trigger: TGGCGAGTCCCTGTGGCAGCGGCAGCGGCTGCAGAGCGAGTGCAAGATGGCCAAGATCATGCTGCTGGTCATCCTCCTCTTCGTGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CAA 90 bp TGGCTTCCAAGTCCTCCAGACCCTGACCGTAGAGGGACCGCCCATTaGCTTGCTGGGCAGCTCCCCACACAGCTGCTGCCTCCATGTGTG +
Preference number: 6 (lower is better)
Translates to: WLPSPPDPDRRGTAH*LAGQLPTQLLPPCV
Trigger: CACACATGGAGGCAGCAGCTGTGTGGGGAGCTGCCCAGCAAGCAAATGGGCGGTCCCTCTACGGTCAGGGTCTGGAGGACTTGGAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS GCA 72 bp ATGATCTTGGCCATCTTGCACTCGCTCTGCAGCCGCTaGCGCTGCCACAGGGACTCGCCATTGCCCTTGCAG +
Preference number: 6 (lower is better)
Translates to: MILAILHSLCSR*RCHRDSPLPLQ
Trigger: CTGCAAGGGCAATGGCGAGTCCCTGTGGCAGCGGCAGCGGCTGCAGAGCGAGTGCAAGATGGCCAAGATCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS GCA 72 bp ACCAGCAGCATGATCTTGGCCATCTTGCACTCGCTCTaGAGCCGCTGCCGCTGCCACAGGGACTCGCCATTG +
Preference number: 6 (lower is better)
Translates to: TSSMILAILHSL*SRCRCHRDSPL
Trigger: CAATGGCGAGTCCCTGTGGCAGCGGCAGCGGCTGCAGAGCGAGTGCAAGATGGCCAAGATCATGCTGCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS GCA 72 bp CCCATTTGCTTGCTGGGCAGCTCCCCACACAGCTGCTaGCTCCATGTGTGTCCAGCCCACCTCACTCTCCGA +
Preference number: 6 (lower is better)
Translates to: PICLLGSSPHSC*LHVCPAHLTLR
Trigger: TCGGAGAGTGAGGTGGGCTGGACACACATGGAGGCAGCAGCTGTGTGGGGAGCTGCCCAGCAAGCAAATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CCA 72 bp GGGGTTGTGGATTGCAGAGGCCTTGGCGATGACGGCTaGCACCGAGCTCATGTAGGGTGTCAGGACGTGTGC +
Preference number: 6 (lower is better)
Translates to: GVVDCRGLGDDG*HRAHVGCQDVC
Trigger: GCACACGTCCTGACACCCTACATGAGCTCGGTGCCAGCCGTCATCGCCAAGGCCTCTGCAATCCACAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CCA 72 bp TCTTCCCTGGAGTCTCTGCTTCGTGTCCCTGGGGTCTaGGGGGTGCCTTGGCTTCCAAGTCCTCCAGACCCT +
Preference number: 6 (lower is better)
Translates to: SSLESLLRVPGV*GVPWLPSPPDP
Trigger: AGGGTCTGGAGGACTTGGAAGCCAAGGCACCCCCCAGACCCCAGGGACACGAAGCAGAGACTCCAGGGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CAA 90 bp TTCCAAGTCCTCCAGACCCTGACCGTAGAGGGACCGCCCATTTGCTaGCTGGGCAGCTCCCCACACAGCTGCTGCCTCCATGTGTGTCCA +
Preference number: 6 (lower is better)
Translates to: FQVLQTLTVEGPPIC*LGSSPHSCCLHVCP
Trigger: TGGACACACATGGAGGCAGCAGCTGTGTGGGGAGCTGCCCAGCAAGCAAATGGGCGGTCCCTCTACGGTCAGGGTCTGGAGGACTTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS TCA 72 bp TGGGCGGGACTCTTGGCCCCGAAGGAGGGTTCATCCTaGGTTGGGATGGTCCTTGCTCGAGCCCACAGAGAA +
Preference number: 6 (lower is better)
Translates to: WAGLLAPKEGSS*VGMVLARAHRE
Trigger: TTCTCTGTGGGCTCGAGCAAGGACCATCCCAACTCAGGATGAACCCTCCTTCGGGGCCAAGAGTCCCGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS GCA 72 bp GGGGTGGGTGATGGCGTAAATGATGGGGTTGTGGATTaGAGAGGCCTTGGCGATGACGGCTGGCACCGAGCT +
Preference number: 6 (lower is better)
Translates to: GVGDGVNDGVVD*RGLGDDGWHRA
Trigger: AGCTCGGTGCCAGCCGTCATCGCCAAGGCCTCTGCAATCCACAACCCCATCATTTACGCCATCACCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CCA 72 bp CAAGATCACTGTGCCCAGGGTATAGTGGGCATGGTCTaGAACATCAACCGTGGGGAGGGGGACCCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: QDHCAQGIVGMV*NINRGEGDPGS
Trigger: GCTGCCTGGGTCCCCCTCCCCACGGTTGATGTTCCAGACCATGCCCACTATACCCTGGGCACAGTGATCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CAA 72 bp AAGAGGAGGATGACCAGCAGCATGATCTTGGCCATCTaGCACTCGCTCTGCAGCCGCTGCCGCTGCCACAGG +
Preference number: 6 (lower is better)
Translates to: KRRMTSSMILAI*HSLCSRCRCHR
Trigger: CCTGTGGCAGCGGCAGCGGCTGCAGAGCGAGTGCAAGATGGCCAAGATCATGCTGCTGGTCATCCTCCTCTT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS TCA 72 bp AGCAGAGAAGCATGGTGTAGGCACGCACGGCCGGCGTaGAGCTCATGTAGTCCCAGGAGCAGGATGTCAGCA +
Preference number: 6 (lower is better)
Translates to: SREAWCRHARPA*SSCSPRSRMSA
Trigger: TGCTGACATCCTGCTCCTGGGACTACATGAGCTTCACGCCGGCCGTGCGTGCCTACACCATGCTTCTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS GCA 72 bp CCCGAAGGAGGGTTCATCCTGAGTTGGGATGGTCCTTaGTCGAGCCCACAGAGAAGTCAAGGGCACAGGGAG +
Preference number: 6 (lower is better)
Translates to: PEGGFILSWDGP*SSPQRSQGHRE
Trigger: CTCCCTGTGCCCTTGACTTCTCTGTGGGCTCGAGCAAGGACCATCCCAACTCAGGATGAACCCTCCTTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CAA 72 bp CCCCGAAGGAGGGTTCATCCTGAGTTGGGATGGTCCTaGCTCGAGCCCACAGAGAAGTCAAGGGCACAGGGA +
Preference number: 6 (lower is better)
Translates to: PRRRVHPELGWS*LEPTEKSRAQG
Trigger: TCCCTGTGCCCTTGACTTCTCTGTGGGCTCGAGCAAGGACCATCCCAACTCAGGATGAACCCTCCTTCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CAA 72 bp CGGGACTCTTGGCCCCGAAGGAGGGTTCATCCTGAGTaGGGATGGTCCTTGCTCGAGCCCACAGAGAAGTCA +
Preference number: 6 (lower is better)
Translates to: RDSWPRRRVHPE*GWSLLEPTEKS
Trigger: TGACTTCTCTGTGGGCTCGAGCAAGGACCATCCCAACTCAGGATGAACCCTCCTTCGGGGCCAAGAGTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CCA 72 bp TCTTGGCCCCGAAGGAGGGTTCATCCTGAGTTGGGATaGTCCTTGCTCGAGCCCACAGAGAAGTCAAGGGCA +
Preference number: 6 (lower is better)
Translates to: SWPRRRVHPELG*SLLEPTEKSRA
Trigger: TGCCCTTGACTTCTCTGTGGGCTCGAGCAAGGACCATCCCAACTCAGGATGAACCCTCCTTCGGGGCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CCA 72 bp GGGACTCTTGGCCCCGAAGGAGGGTTCATCCTGAGTTaGGATGGTCCTTGCTCGAGCCCACAGAGAAGTCAA +
Preference number: 6 (lower is better)
Translates to: GTLGPEGGFILS*DGPCSSPQRSQ
Trigger: TTGACTTCTCTGTGGGCTCGAGCAAGGACCATCCCAACTCAGGATGAACCCTCCTTCGGGGCCAAGAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241891.10
ENST00000372071.6
ENST00000443292.1
CDS CAA 72 bp AGGAAGTCGCTGACCGCGAGGTTGATAATGAACATGTaGGCAGGTGTCCGGAGGCTTCTGCTCCTGCAGAAG +
Preference number: 6 (lower is better)
Translates to: RKSLTARLIMNM*AGVRRLLLLQK
Trigger: CTTCTGCAGGAGCAGAAGCCTCCGGACACCTGCCAACATGTTCATTATCAACCTCGCGGTCAGCGACTTCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241891.10
CDS TCA 72 bp CAGGTGTCCGGAGGCTTCTGCTCTGCATCATCACAGTaGCTCCACGAAGCACAGCTCTGCAGAAGGTATAGA +
Preference number: 6 (lower is better)
Translates to: QVSGGFCSASSQ*LHEAQLCRRYR
Trigger: TCTATACCTTCTGCAGAGCTGTGCTTCGTGGAGTCACTGTGATGATGCAGAGCAGAAGCCTCCGGACACCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372071.6
ENST00000443292.1
CDS CAA 72 bp AGGAAGTCGCTGACCGCGAGGTTGATAATGAACATGTaGGCAGGTGTCCGGAGGCTTCTGCTCTGCATCATC +
Preference number: 6 (lower is better)
Translates to: RKSLTARLIMNM*AGVRRLLLCII
Trigger: GATGATGCAGAGCAGAAGCCTCCGGACACCTGCCAACATGTTCATTATCAACCTCGCGGTCAGCGACTTCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372071.6
ENST00000443292.1
CDS CAA 90 bp AAGGACATGAGGAAGTCGCTGACCGCGAGGTTGATAATGAACATGTaGGCAGGTGTCCGGAGGCTTCTGCTCTGCATCATCACAGTGACT +
Preference number: 6 (lower is better)
Translates to: KDMRKSLTARLIMNM*AGVRRLLLCIITVT
Trigger: AGTCACTGTGATGATGCAGAGCAGAAGCCTCCGGACACCTGCCAACATGTTCATTATCAACCTCGCGGTCAGCGACTTCCTCATGTCCTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372071.6
ENST00000443292.1