RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OPCML (Homo sapiens)

Ensembl gene IDs: ENSG00000183715

Ensembl transcript IDs: ENST00000331898.11, ENST00000374778.4, ENST00000524381.5, ENST00000524381.6, ENST00000529019.1, ENST00000529038.5, ENST00000541867.5, ENST00000612177.4

Found 884 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGTGGCTGGGATAGGTACCCACCAGAGGGGCATCTTAGTATCCTTTaGAAGGGGGAACAGCAGGGTTCCATAGTGGCCCTGAAGCCAGCC +
Preference number: 1 (lower is better)
Translates to: RGWDRYPPEGHLSIL*KGEQQGSIVALKPA
Trigger: GGCTGGCTTCAGGGCCACTATGGAACCCTGCTGTTCCCCCTTCCAAAGGATACTAAGATGCCCCTCTGGTGGGTACCTATCCCAGCCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 90 bp GGCGACAGCCAACCAGCACTTGAAAATTCAATGTACAGCCACTCCTaGTGCCGCCACAGGGATAAGCTCTCGTCGGGGTTGCCTGCCCAC +
Preference number: 1 (lower is better)
Translates to: GDSQPALENSMYSHS*CRHRDKLSSGLPAH
Trigger: GTGGGCAGGCAACCCCGACGAGAGCTTATCCCTGTGGCGGCATCAGGAGTGGCTGTACATTGAATTTTCAAGTGCTGGTTGGCTGTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CCA 90 bp AGGCAGGGCAGGTCTGCGATTGATGCTGCATTCTCATCCTCTCTGTaGATCAGTCCCTGCAGCACACCTGTGCGGTCTGCAATGCCTTTA +
Preference number: 1 (lower is better)
Translates to: RQGRSAIDAAFSSSL*ISPCSTPVRSAMPL
Trigger: TAAAGGCATTGCAGACCGCACAGGTGTGCTGCAGGGACTGATCCACAGAGAGGATGAGAATGCAGCATCAATCGCAGACCTGCCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CCA 90 bp CCTGCTCATGATCATCCCTGGAACTGGGAATCAATGCACCATTCCTaGCACATCAGTTACGGTTCCCGAATCTGGCTCCTGGCAGCTCAC +
Preference number: 1 (lower is better)
Translates to: PAHDHPWNWESMHHS*HISYGSRIWLLAAH
Trigger: GTGAGCTGCCAGGAGCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGTTCCAGGGATGATCATGAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR GCA 90 bp GTCCCAGGAGACAAGACAGCAAAGGTGGCTCAGCTCTTGTTTGTATaGTGGGTCTGCTTTGAACCTGAAGAGCTGGTGAAGTTCTTCCCC +
Preference number: 1 (lower is better)
Translates to: VPGDKTAKVAQLLFV*WVCFEPEELVKFFP
Trigger: GGGGAAGAACTTCACCAGCTCTTCAGGTTCAAAGCAGACCCAGCATACAAACAAGAGCTGAGCCACCTTTGCTGTCTTGTCTCCTGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR GCA 90 bp CCTCTCTGTGGATCAGTCCCTGCAGCACACCTGTGCGGTCTGCAATaGCTTTATTTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTC +
Preference number: 1 (lower is better)
Translates to: PLCGSVPAAHLCGLQ*LYFESQATLLDESF
Trigger: GAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAAATAAAGGCATTGCAGACCGCACAGGTGTGCTGCAGGGACTGATCCACAGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR GCA 90 bp CTGATTTTGCGCCTGCTCATGATCATCCCTGGAACTGGGAATCAATaGACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCTCC +
Preference number: 1 (lower is better)
Translates to: LILRLLMIIPGTGNQ*TIPGTSVTVPESGS
Trigger: GGAGCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGTTCCAGGGATGATCATGAGCAGGCGCAAAATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CCA 90 bp TTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGACAGCAAAGGTaGCTCAGCTCTTGTTTGTATGCTGGGTCTGCTTTGAACCTGAAG +
Preference number: 1 (lower is better)
Translates to: LLDESFSSQETRQQR*LSSCLYAGSALNLK
Trigger: CTTCAGGTTCAAAGCAGACCCAGCATACAAACAAGAGCTGAGCCACCTTTGCTGTCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CCA 90 bp TGGGGCCTCTTTGTGACACAACACCTTACCTTTTCTTCTGTTTCGTaGAGCACAGTTGCAGCAGAACAGCCATGCGCAGTGCTCTGCATA +
Preference number: 1 (lower is better)
Translates to: WGLFVTQHLTFSSVS*STVAAEQPCAVLCI
Trigger: TATGCAGAGCACTGCGCATGGCTGTTCTGCTGCAACTGTGCTCCACGAAACAGAAGAAAAGGTAAGGTGTTGTGTCACAAAGAGGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 90 bp AGCTCTTGTTTGTATGCTGGGTCTGCTTTGAACCTGAAGAGCTGGTaGAGTTCTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGG +
Preference number: 1 (lower is better)
Translates to: SSCLYAGSALNLKSW*SSSPKPLEKQLHQR
Trigger: CCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAGAACTTCACCAGCTCTTCAGGTTCAAAGCAGACCCAGCATACAAACAAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR GCA 90 bp ACCTGTGCGGTCTGCAATGCCTTTATTTTGAATCCCAGGCAACTTTaGTGGATGAGTCCTTCTCGTCCCAGGAGACAAGACAGCAAAGGT +
Preference number: 1 (lower is better)
Translates to: TCAVCNAFILNPRQL*WMSPSRPRRQDSKG
Trigger: ACCTTTGCTGTCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAAATAAAGGCATTGCAGACCGCACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CCA 90 bp TGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCTCCTaGCAGCTCACTAGGAAATGCAGATGTCTGTTTACAGCTGGAAAA +
Preference number: 1 (lower is better)
Translates to: CTIPGTSVTVPESGS*QLTRKCRCLFTAGK
Trigger: TTTTCCAGCTGTAAACAGACATCTGCATTTCCTAGTGAGCTGCCAGGAGCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CCA 90 bp TCAAAAGGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTaGTGTGGAGCAACTCTGTGCCTTAAAGAGGGCACCATGGAAAGA +
Preference number: 1 (lower is better)
Translates to: SKGWSRVRNLSFSTQ*CGATLCLKEGTMER
Trigger: TCTTTCCATGGTGCCCTCTTTAAGGCACAGAGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCCTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 90 bp TGGCCAAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTaGGGAATAGGTCCAGCTTGTCCATTTCAAGCACTGTGTTCTCCA +
Preference number: 1 (lower is better)
Translates to: WPKEHGPFPVEQVLE*GIGPACPFQALCSP
Trigger: TGGAGAACACAGTGCTTGAAATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTTGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR GCA 90 bp GACAAGACAGCAAAGGTGGCTCAGCTCTTGTTTGTATGCTGGGTCTaGTTTGAACCTGAAGAGCTGGTGAAGTTCTTCCCCAAAGCCATT +
Preference number: 1 (lower is better)
Translates to: DKTAKVAQLLFVCWV*FEPEELVKFFPKAI
Trigger: AATGGCTTTGGGGAAGAACTTCACCAGCTCTTCAGGTTCAAAGCAGACCCAGCATACAAACAAGAGCTGAGCCACCTTTGCTGTCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR GCA 90 bp GTTTCGTGGAGCACAGTTGCAGCAGAACAGCCATGCGCAGTGCTCTaGATAAAGCCTGTACATGTTTTCACAACCACTTCTCTACATCTC +
Preference number: 1 (lower is better)
Translates to: VSWSTVAAEQPCAVL*IKPVHVFTTTSLHL
Trigger: GAGATGTAGAGAAGTGGTTGTGAAAACATGTACAGGCTTTATGCAGAGCACTGCGCATGGCTGTTCTGCTGCAACTGTGCTCCACGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR GCA 90 bp TGTGACACAACACCTTACCTTTTCTTCTGTTTCGTGGAGCACAGTTaGAGCAGAACAGCCATGCGCAGTGCTCTGCATAAAGCCTGTACA +
Preference number: 1 (lower is better)
Translates to: CDTTPYLFFCFVEHS*SRTAMRSALHKACT
Trigger: TGTACAGGCTTTATGCAGAGCACTGCGCATGGCTGTTCTGCTGCAACTGTGCTCCACGAAACAGAAGAAAAGGTAAGGTGTTGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 90 bp TCTCTGTGTGTGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTaGTGGACAAAAACAAAGAGGACACTGATACCAGAGGAAGAAGAC +
Preference number: 1 (lower is better)
Translates to: SLCVFPHGRGHTHVP*WTKTKRTLIPEEED
Trigger: GTCTTCTTCCTCTGGTATCAGTGTCCTCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACACACACAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CCA 90 bp ACCTTTAATTCTGATTTTGCGCCTGCTCATGATCATCCCTGGAACTaGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGA +
Preference number: 1 (lower is better)
Translates to: TFNSDFAPAHDHPWN*ESMHHSWHISYGSR
Trigger: TCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGTTCCAGGGATGATCATGAGCAGGCGCAAAATCAGAATTAAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CCA 90 bp TGTGCGACCTTTAATTCTGATTTTGCGCCTGCTCATGATCATCCCTaGAACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGT +
Preference number: 1 (lower is better)
Translates to: CATFNSDFAPAHDHP*NWESMHHSWHISYG
Trigger: ACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGTTCCAGGGATGATCATGAGCAGGCGCAAAATCAGAATTAAAGGTCGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 90 bp CCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTaGCACTTTCTCCCTTCTGTTTGCAGTGTTGTGTTAATCAAGTGC +
Preference number: 1 (lower is better)
Translates to: PKPLEKQLHQRKLCH*HFLPSVCSVVLIKC
Trigger: GCACTTGATTAACACAACACTGCAAACAGAAGGGAGAAAGTGTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 90 bp AGGAAAGCCAGCCATAGGTTCCTGACATGTACTTTCTTGAAGGGTTaGGAGAAGCATAAAGGCTGGCACCTTTGTCCTTCAAGTGCAAAA +
Preference number: 1 (lower is better)
Translates to: RKASHRFLTCTFLKG*EKHKGWHLCPSSAK
Trigger: TTTTGCACTTGAAGGACAAAGGTGCCAGCCTTTATGCTTCTCTCAACCCTTCAAGAAAGTACATGTCAGGAACCTATGGCTGGCTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 90 bp AAATTAAGTCAGTTGCTCAAGTGCCCTCAGCTTAGAAGAGCTTCCTaGAACAAATACCAGAGTTGTCAATACACCCGCCATGTAATTGGC +
Preference number: 1 (lower is better)
Translates to: KLSQLLKCPQLRRAS*NKYQSCQYTRHVIG
Trigger: GCCAATTACATGGCGGGTGTATTGACAACTCTGGTATTTGTTTCAGGAAGCTCTTCTAAGCTGAGGGCACTTGAGCAACTGACTTAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR GCA 90 bp GTTTTTCTTTCTCAAGATCAAAGTCAGTATGGAATTGAGGAAAGATaGCCCACCACCAGATCTTACCTCATCTTAAGCCATTCCTCCCCT +
Preference number: 1 (lower is better)
Translates to: VFLSQDQSQYGIEER*PTTRSYLILSHSSP
Trigger: AGGGGAGGAATGGCTTAAGATGAGGTAAGATCTGGTGGTGGGGCATCTTTCCTCAATTCCATACTGACTTTGATCTTGAGAAAGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 90 bp TTTAGACTTGCAGTCGACTGTATCAGGCACTTGACATTAAACTACTaGAAAACAAGCTTGGCTGCAGCCTTAACACGAGCACTTTCATTG +
Preference number: 1 (lower is better)
Translates to: FRLAVDCIRHLTLNY*KTSLAAALTRALSL
Trigger: CAATGAAAGTGCTCGTGTTAAGGCTGCAGCCAAGCTTGTTTTTCAGTAGTTTAATGTCAAGTGCCTGATACAGTCGACTGCAAGTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR GCA 90 bp CTGTATCAGGCACTTGACATTAAACTACTGAAAAACAAGCTTGGCTaGAGCCTTAACACGAGCACTTTCATTGGCATTACTTTGGTGGAA +
Preference number: 1 (lower is better)
Translates to: LYQALDIKLLKNKLG*SLNTSTFIGITLVE
Trigger: TTCCACCAAAGTAATGCCAATGAAAGTGCTCGTGTTAAGGCTGCAGCCAAGCTTGTTTTTCAGTAGTTTAATGTCAAGTGCCTGATACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 90 bp GTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGTGTTTATTGTaGGGCTCAATTTTTGCCCAAATGAAACTTACGTTTTGTTGTGTG +
Preference number: 1 (lower is better)
Translates to: VHYVISQVVSSGCLL*GSIFAQMKLTFCCV
Trigger: CACACAACAAAACGTAAGTTTCATTTGGGCAAAAATTGAGCCTCACAATAAACACCCTGAAGACACAACTTGACTTATAACATAGTGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCCACGTGGTAGAACCCTaGCCACCCCGCCCCCAACCC +
Preference number: 2 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGHVVEP*PPRPQP
Trigger: GGGTTGGGGGCGGGGTGGGCAGGGTTCTACCACGTG...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTAGCTCTCGTCGGGGTTaGCTGCCCACTTTGGGGTTC +
Preference number: 2 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATSSRRG*LPTLGF
Trigger: GAACCCCAAAGTGGGCAGGCAACCCCGACGAGAGCT...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CAA 90 bp CCATTCCTCCCCTCCTACCATGGGCTGGCGACAGCCAACCAGCACTaGAAAATTCAATGTACAGCCACTCCTGATGCCGCCACAGGGATA +
Preference number: 2 (lower is better)
Translates to: PFLPSYHGLATANQH*KIQCTATPDAATGI
Trigger: TATCCCTGTGGCGGCATCAGGAGTGGCTGTACATTGAATTTTCAAGTGCTGGTTGGCTGTCGCCAGCCCATGGTAGGAGGGGAGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTCACGTGGTAGAACCCTaGCCACCCCGCCCCCAACCC +
Preference number: 2 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTHVVEP*PPRPQP
Trigger: GGGTTGGGGGCGGGGTGGGCAGGGTTCTACCACGTG...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTCACGTGGTAGAACCCTaGCCACCCCGCCCCCAACCC +
Preference number: 2 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGHVVEP*PPRPQP
Trigger: GGGTTGGGGGCGGGGTGGGCAGGGTTCTACCACGTG...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTATGTACAGCCACTCCTaGTGCCGCCACAGGGATAAG +
Preference number: 2 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATMYSHS*CRHRDK
Trigger: CTTATCCCTGTGGCGGCATCAGGAGTGGCTGTACAT...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTCCCAGGCAACTTTGCTaGATGAGTCCTTCTCGTCCC +
Preference number: 2 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATPRQLC*MSPSRP
Trigger: GGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGG...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTCCCGAATCTGGCTCCTaGCAGCTCACTAGGAAATGC +
Preference number: 2 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATPESGS*QLTRKC
Trigger: GCATTTCCTAGTGAGCTGCCAGGAGCCAGATTCGGG...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTCCTCTGAAACGTGGCTaGGATAGGTACCCACCAGAG +
Preference number: 2 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATPLKRG*DRYPPE
Trigger: CTCTGGTGGGTACCTATCCCAGCCACGTTTCAGAGG...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CAA 90 bp GATCAGTCCCTGCAGCACACCTGTGCGGTCTGCAATGCCTTTATTTaGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGG +
Preference number: 2 (lower is better)
Translates to: DQSLQHTCAVCNAFI*NPRQLCWMSPSRPR
Trigger: CCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAAATAAAGGCATTGCAGACCGCACAGGTGTGCTGCAGGGACTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATCACGTGGTAGAACCCTaGCCACCCCGCCCCCAACCC +
Preference number: 2 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYHVVEP*PPRPQP
Trigger: GGGTTGGGGGCGGGGTGGGCAGGGTTCTACCACGTG...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTGCAGCAGAACAGCCATaGGCAGTGCTCTGCATAAAG +
Preference number: 2 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATAAEQP*AVLCIK
Trigger: CTTTATGCAGAGCACTGCGCATGGCTGTTCTGCTGC...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTTCCCACTCAGGCGGGTaGACTCTTCACTTTGCATTG +
Preference number: 2 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATSHSGG*TLHFAL
Trigger: CAATGCAAAGTGAAGAGTCCACCCGCCTGAGTGGGA...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCAAAGGAGACTCTAGCTaGAGTCATCCCACTCAGGCG +
Preference number: 2 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGKGDSS*SHPTQA
Trigger: CGCCTGAGTGGGATGACTTCAGCTAGAGTCTCCTTT...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTCCAGCCTTGTTGGGTTaGGAGGTTCTGATGATCTTG +
Preference number: 2 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATPALLG*EVLMIL
Trigger: CAAGATCATCAGAACCTCTCAACCCAACAAGGCTGG...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCCCTGCAGCACACCTGTaGGGTCTGCAATGCCTTTAT +
Preference number: 2 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGPAAHL*GLQCLY
Trigger: ATAAAGGCATTGCAGACCGCACAGGTGTGCTGCAGG...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTCTTCCCCAAAGCCATTaGAGAAGCAGCTGCATCAGA +
Preference number: 2 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATLPQSH*RSSCIR
Trigger: TCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CAA 90 bp CACCTGTGCGGTCTGCAATGCCTTTATTTTGAATCCCAGGCAACTTaGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGACAGCAAAGG +
Preference number: 2 (lower is better)
Translates to: HLCGLQCLYFESQAT*LDESFSSQETRQQR
Trigger: CCTTTGCTGTCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAAATAAAGGCATTGCAGACCGCACAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTGAACAAGTCTTGGAGTaGGGAATAGGTCCAGCTTGT +
Preference number: 2 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATEQVLE*GIGPAC
Trigger: ACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTC...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTCACCCGCCATGTAATTaGCCTCCATCAGCTTTTTAC +
Preference number: 2 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATHPPCN*PPSAFY
Trigger: GTAAAAAGCTGATGGAGGCCAATTACATGGCGGGTG...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCGTGTGTGTTTCCCCATaGCAGAGGTCACACTCATGT +
Preference number: 2 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGVCVSP*QRSHSC
Trigger: ACATGAGTGTGACCTCTGCCATGGGGAAACACACAC...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCCCCGAATCTGGCTCCTaGCAGCTCACTAGGAAATGC +
Preference number: 2 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSPESGS*QLTRKC
Trigger: GCATTTCCTAGTGAGCTGCCAGGAGCCAGATTCGGG...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTGGCAACTTTGCTGGATaGGTCCTTCTCGTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIGNFAG*VLLVPG
Trigger: TCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCC...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTGGGCAGGTCTGCGATTaGTGCTGCATTCTCATCCTC +
Preference number: 2 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGGQVCD*CCILIL
Trigger: GAGGATGAGAATGCAGCATCAATCGCAGACCTGCCC...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTTTTAGACTGAGGGCCTaGAAAGGTTTTCCAACTGAG +
Preference number: 2 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATFRLRA*KGFPTE
Trigger: CTCAGTTGGAAAACCTTTTCAGGCCCTCAGTCTAAA...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCTTTTGCGCCTGCTCATaGTCATCCCTGGAACTGGGA +
Preference number: 2 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSFCACS*SSLELG
Trigger: TCCCAGTTCCAGGGATGATCATGAGCAGGCGCAAAA...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCAAGCCCAAGCTGGTTTaGTCTCCGCAGTGTAGATTA +
Preference number: 2 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGKPKLV*SPQCRL
Trigger: TAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTGTGGACTCTTCACTTTaGATTGCAGAGACAGATGTG +
Preference number: 2 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATVDSSL*IAETDV
Trigger: CACATCTGTCTCTGCAATGCAAAGTGAAGAGTCCAC...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACAGTCAGTTGCTCAAGTaGCCTCAGCTTAGAAGAGCT +
Preference number: 2 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDSQLLK*PQLRRA
Trigger: AGCTCTTCTAAGCTGAGGGCACTTGAGCAACTGACT...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCAATCCCAGGCAACTTTaGTGGATGAGTCCTTCTCGT +
Preference number: 2 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGNPRQL*WMSPSR
Trigger: ACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATT...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTCTGTGCGGTCTGCAATaGCTTTATTTTGAATCCCAG +
Preference number: 2 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATLCGLQ*LYFESQ
Trigger: CTGGGATTCAAAATAAAGGCATTGCAGACCGCACAG...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTCCCAGGCAACTTTGCTaGATGAGTCCTTCTCGTCCC +
Preference number: 2 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIPRQLC*MSPSRP
Trigger: GGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGG...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCACTTTCTTGAAGGGTTaGGAGAAGCATAAAGGCTGG +
Preference number: 2 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGTFLKG*EKHKGW
Trigger: CCAGCCTTTATGCTTCTCTCAACCCTTCAAGAAAGT...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACACTTTCTTGAAGGGTTaGGAGAAGCATAAAGGCTGG +
Preference number: 2 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDTFLKG*EKHKGW
Trigger: CCAGCCTTTATGCTTCTCTCAACCCTTCAAGAAAGT...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGAAAAGGAGACTCTAGCTaGAGTCATCCCACTCAGGCG +
Preference number: 2 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRKGDSS*SHPTQA
Trigger: CGCCTGAGTGGGATGACTTCAGCTAGAGTCTCCTTT...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAACCTGAAGAGCTGGTaGAGTTCTTCCCCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSNLKSW*SSSPKP
Trigger: TGGCTTTGGGGAAGAACTTCACCAGCTCTTCAGGTT...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTGGCAACTTTGCTGGATaGGTCCTTCTCGTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSGNFAG*VLLVPG
Trigger: TCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCC...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTTTTTGCGCCTGCTCATaGTCATCCCTGGAACTGGGA +
Preference number: 2 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGFCACS*SSLELG
Trigger: TCCCAGTTCCAGGGATGATCATGAGCAGGCGCAAAA...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCTTTTGCGCCTGCTCATaGTCATCCCTGGAACTGGGA +
Preference number: 2 (lower is better)
Translates to: KPARDVLAQTCMFCPALPFCACS*SSLELG
Trigger: TCCCAGTTCCAGGGATGATCATGAGCAGGCGCAAAA...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTCTACTTACACACCTGTaGAGTTTTACTCAAGTGCTC +
Preference number: 2 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATLLTHL*SFTQVL
Trigger: GAGCACTTGAGTAAAACTTCACAGGTGTGTAAGTAG...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCTTTGTATGCTGGGTCTaGTTTGAACCTGAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGFVCWV*FEPEEL
Trigger: CAGCTCTTCAGGTTCAAAGCAGACCCAGCATACAAA...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTCACACCTGTGCGGTCTaGAATGCCTTTATTTTGAAT +
Preference number: 2 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATHTCAV*NAFILN
Trigger: ATTCAAAATAAAGGCATTGCAGACCGCACAGGTGTG...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATCTGTGGATCAGTCCCTaGAGCACACCTGTGCGGTCT +
Preference number: 2 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYLWISP*STPVRS
Trigger: AGACCGCACAGGTGTGCTGCAGGGACTGATCCACAG...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACTCTGGGAATAGTGAGTaGCTGATCATTAGCTTGCTA +
Preference number: 2 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDSGNSE*LIISLL
Trigger: TAGCAAGCTAATGATCAGTCACTCACTATTCCCAGA...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTAACCTGAAGAGCTGGTaGAGTTCTTCCCCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGNLKSW*SSSPKP
Trigger: TGGCTTTGGGGAAGAACTTCACCAGCTCTTCAGGTT...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCGGGCAGGTCTGCGATTaGTGCTGCATTCTCATCCTC +
Preference number: 2 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCGQVCD*CCILIL
Trigger: GAGGATGAGAATGCAGCATCAATCGCAGACCTGCCC...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCCATTGGAGAAGCAGCTaGATCAGAGGAAACTGTGTC +
Preference number: 2 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSHWRSS*IRGNCV
Trigger: GACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATG...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCCACACCTGTGCGGTCTaGAATGCCTTTATTTTGAAT +
Preference number: 2 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGHTCAV*NAFILN
Trigger: ATTCAAAATAAAGGCATTGCAGACCGCACAGGTGTG...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTGTGGATCAGTCCCTaGAGCACACCTGTGCGGTCT +
Preference number: 2 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRLWISP*STPVRS
Trigger: AGACCGCACAGGTGTGCTGCAGGGACTGATCCACAG...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTTACCTCTTAAGACAGTaGTTAGCATTTAGTGTGCCA +
Preference number: 2 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATYLLRQ*LAFSVP
Trigger: TGGCACACTAAATGCTAAGCACTGTCTTAAGAGGTA...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTGGGAGAGATACAATATaGTTAGAGATTCATATGGGG +
Preference number: 2 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATGRDTI*LEIHMG
Trigger: CCCCATATGAATCTCTAACCATATTGTATCTCTCCC...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCCTTCCCCAAAGCCATTaGAGAAGCAGCTGCATCAGA +
Preference number: 2 (lower is better)
Translates to: KPARDVLAQTCMFCPALPLPQSH*RSSCIR
Trigger: TCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCCTCTTGTTTGTATGCTaGGTCTGCTTTGAACCTGAA +
Preference number: 2 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGLLFVC*VCFEPE
Trigger: TTCAGGTTCAAAGCAGACCCAGCATACAAACAAGAG...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTTTCTCATCCTCTCTGTaGATCAGTCCCTGCAGCACA +
Preference number: 2 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGFSSSL*ISPCST
Trigger: TGTGCTGCAGGGACTGATCCACAGAGAGGATGAGAA...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCTCAATGCACCATTCCTaGCACATCAGTTACGGTTCC +
Preference number: 2 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSSMHHS*HISYGS
Trigger: GGAACCGTAACTGATGTGCCAGGAATGGTGCATTGA...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CAA 90 bp ATCTCTGTGTGTGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTaGATGGACAAAAACAAAGAGGACACTGATACCAGAGGAAGAAGA +
Preference number: 2 (lower is better)
Translates to: ISVCVSPWQRSHSCA*MDKNKEDTDTRGRR
Trigger: TCTTCTTCCTCTGGTATCAGTGTCCTCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACACACACAGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CAA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTaGTCCATTTCAAGCACTGTGTTCTCCAAGACTGTCCACTCTTCA +
Preference number: 2 (lower is better)
Translates to: TLSCRTSLGVRNRSS*SISSTVFSKTVHSS
Trigger: TGAAGAGTGGACAGTCTTGGAGAACACAGTGCTTGAAATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATAAAGGAGACTCTAGCTaGAGTCATCCCACTCAGGCG +
Preference number: 2 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYKGDSS*SHPTQA
Trigger: CGCCTGAGTGGGATGACTTCAGCTAGAGTCTCCTTT...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAGGCAACTTTGCTGGATaGGTCCTTCTCGTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRGNFAG*VLLVPG
Trigger: TCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCC...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAGGGCAGGTCTGCGATTaGTGCTGCATTCTCATCCTC +
Preference number: 2 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRGQVCD*CCILIL
Trigger: GAGGATGAGAATGCAGCATCAATCGCAGACCTGCCC...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATAAAAGGTTTTCCAACTaGGGCAGGGCAGGTCTGCGA +
Preference number: 2 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYKRFSN*GRAGLR
Trigger: TCGCAGACCTGCCCTGCCTCAGTTGGAAAACCTTTT...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCCACACTCATGTGCCTTaGTGGACAAAAACAAAGAGG +
Preference number: 2 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSHTHVP*WTKTKR
Trigger: CCTCTTTGTTTTTGTCCATCAAGGCACATGAGTGTG...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGCATTTCTCTCCCTCTaGAACGTGGCTGGGATAGGT +
Preference number: 2 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYAFLSL*NVAGIG
Trigger: ACCTATCCCAGCCACGTTTCAGAGGGAGAGAAATGC...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTCTTCAAAATGATGGGTaGCAGCCACTCTCCCATGAA +
Preference number: 2 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGLQNDG*QPLSHE
Trigger: TTCATGGGAGAGTGGCTGTCACCCATCATTTTGAAG...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCCCACTACTGGCACCCTaGACAAATCTAGCCTGTAGG +
Preference number: 2 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCPLLAP*TNLACR
Trigger: CCTACAGGCTAGATTTGTTCAGGGTGCCAGTAGTGG...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTAGGTCACGTGCAAAATaGAAACAAAAGATTCTTGCT +
Preference number: 2 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATRSRAK*KQKILA
Trigger: AGCAAGAATCTTTTGTTTTCATTTTGCACGTGACCT...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGTGGAGAAGCAGGCGTTaGTCAGAGGACCTAGGATTT +
Preference number: 2 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVWRSRR*SEDLGF
Trigger: AAATCCTAGGTCCTCTGAGCAACGCCTGCTTCTCCA...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTAAGCCCAAGCTGGTTTaGTCTCCGCAGTGTAGATTA +
Preference number: 2 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIKPKLV*SPQCRL
Trigger: TAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACCTTGGATGTAGCTCTTaGTGTGCACTATGTTATAAG +
Preference number: 2 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDLGCSS*CALCYK
Trigger: CTTATAACATAGTGCACAGCAAGAGCTACATCCAAG...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGACATTGGAGAAGCAGCTaGATCAGAGGAAACTGTGTC +
Preference number: 2 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRHWRSS*IRGNCV
Trigger: GACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATG...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTCATTGGAGAAGCAGCTaGATCAGAGGAAACTGTGTC +
Preference number: 2 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIHWRSS*IRGNCV
Trigger: GACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATG...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCCAGCTCTTGTTTGTATaGTGGGTCTGCTTTGAACCT +
Preference number: 2 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSQLLFV*WVCFEP
Trigger: AGGTTCAAAGCAGACCCAGCATACAAACAAGAGCTG...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTGGAACTGGGAATCAATaGACCATTCCTGGCACATCA +
Preference number: 2 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIGTGNQ*TIPGTS
Trigger: TGATGTGCCAGGAATGGTGCATTGATTCCCAGTTCC...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTAAAAGAAGCCCAAGCTaGTTTGCTCTCCGCAGTGTA +
Preference number: 2 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIKRSPS*FALRSV
Trigger: TACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTT...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGAAAAAGAAGCCCAAGCTaGTTTGCTCTCCGCAGTGTA +
Preference number: 2 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRKRSPS*FALRSV
Trigger: TACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTT...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGAAGTGTCTCCCTTGGGTaGATAGGATACCAGATTTTA +
Preference number: 2 (lower is better)
Translates to: FESQATLLDESFSSQETRSVSLG*IGYQIL
Trigger: TAAAATCTGGTATCCTATCCACCCAAGGGAGACACT...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCCCACTCAGGCGGGTaGACTCTTCACTTTGCATTG +
Preference number: 2 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCSHSGG*TLHFAL
Trigger: CAATGCAAAGTGAAGAGTCCACCCGCCTGAGTGGGA...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCCACCCGCCATGTAATTaGCCTCCATCAGCTTTTTAC +
Preference number: 2 (lower is better)
Translates to: KPARDVLAQTCMFCPALPHPPCN*PPSAFY
Trigger: GTAAAAAGCTGATGGAGGCCAATTACATGGCGGGTG...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACCCAGGCAACTTTGCTaGATGAGTCCTTCTCGTCCC +
Preference number: 2 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRPRQLC*MSPSRP
Trigger: GGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGG...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTTTCTCATCCTCTCTGTaGATCAGTCCCTGCAGCACA +
Preference number: 2 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSFSSSL*ISPCST
Trigger: TGTGCTGCAGGGACTGATCCACAGAGAGGATGAGAA...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTGCTCATGATCATCCCTaGAACTGGGAATCAATGCAC +
Preference number: 2 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIAHDHP*NWESMH
Trigger: GTGCATTGATTCCCAGTTCCAGGGATGATCATGAGC...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCTTGGCCAAAGGAGCATaGACCCTTTCCTGTAGAACA +
Preference number: 2 (lower is better)
Translates to: KPARDVLAQTCMFCPALPLAKGA*TLSCRT
Trigger: TGTTCTACAGGAAAGGGTCCATGCTCCTTTGGCCAA...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGACTGATGGTGTATAAATaGATACAGTGGGAGAGATAC +
Preference number: 2 (lower is better)
Translates to: FESQATLLDESFSSQETRLMVYK*IQWERY
Trigger: GTATCTCTCCCACTGTATTCATTTATACACCATCAG...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTACTTTCTTGAAGGGTTaGGAGAAGCATAAAGGCTGG +
Preference number: 2 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSITFLKG*EKHKGW
Trigger: CCAGCCTTTATGCTTCTCTCAACCCTTCAAGAAAGT...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAAAAGGAGACTCTAGCTaGAGTCATCCCACTCAGGCG +
Preference number: 2 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRKGDSS*SHPTQA
Trigger: CGCCTGAGTGGGATGACTTCAGCTAGAGTCTCCTTT...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGACTTAGAAGAGCTTCCTaGAACAAATACCAGAGTTGT +
Preference number: 2 (lower is better)
Translates to: FESQATLLDESFSSQETRLRRAS*NKYQSC
Trigger: ACAACTCTGGTATTTGTTTCAGGAAGCTCTTCTAAG...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTAGGAAACTGTGTCACTaGCACTTTCTCCCTTCTGTT +
Preference number: 2 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGRKLCH*HFLPSV
Trigger: AACAGAAGGGAGAAAGTGTCAGTGACACAGTTTCCT...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCAACCTGAAGAGCTGGTaGAGTTCTTCCCCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCNLKSW*SSSPKP
Trigger: TGGCTTTGGGGAAGAACTTCACCAGCTCTTCAGGTT...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCTTTAGACTGAGGGCCTaGAAAGGTTTTCCAACTGAG +
Preference number: 2 (lower is better)
Translates to: KPARDVLAQTCMFCPALPFRLRA*KGFPTE
Trigger: CTCAGTTGGAAAACCTTTTCAGGCCCTCAGTCTAAA...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAGCATTTCTCTCCCTCTaGAACGTGGCTGGGATAGGT +
Preference number: 2 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRAFLSL*NVAGIG
Trigger: ACCTATCCCAGCCACGTTTCAGAGGGAGAGAAATGC...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACCACTACTGGCACCCTaGACAAATCTAGCCTGTAGG +
Preference number: 2 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRPLLAP*TNLACR
Trigger: CCTACAGGCTAGATTTGTTCAGGGTGCCAGTAGTGG...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGTGGAGAAGCAGGCGTTaGTCAGAGGACCTAGGATTT +
Preference number: 2 (lower is better)
Translates to: LDVALAVHYVISQVVSSGWRSRR*SEDLGF
Trigger: AAATCCTAGGTCCTCTGAGCAACGCCTGCTTCTCCA...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAAGCAGGCGTTaGTCAGAGGACCTAGGATTT +
Preference number: 2 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIWRSRR*SEDLGF
Trigger: AAATCCTAGGTCCTCTGAGCAACGCCTGCTTCTCCA...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCCAGCTCTTGTTTGTATaGTGGGTCTGCTTTGAACCT +
Preference number: 2 (lower is better)
Translates to: KPARDVLAQTCMFCPALPQLLFV*WVCFEP
Trigger: AGGTTCAAAGCAGACCCAGCATACAAACAAGAGCTG...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGAACGTTTTGTTGTGTGTaGCAGAGGATGTTGTTGGGA +
Preference number: 2 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRTFCCV*QRMLLG
Trigger: TCCCAACAACATCCTCTGCCACACACAACAAAACGT...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTAGAGAGGAAGACAGGTaGGTAGATAATTGGATGGTG +
Preference number: 2 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIREEDR*VDNWMV
Trigger: CACCATCCAATTATCTACCCACCTGTCTTCCTCTCT...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGAGGGAGAGATACAATATaGTTAGAGATTCATATGGGG +
Preference number: 2 (lower is better)
Translates to: FESQATLLDESFSSQETRGRDTI*LEIHMG
Trigger: CCCCATATGAATCTCTAACCATATTGTATCTCTCCC...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTGAGAAGCATAAAGGCTaGCACCTTTGTCCTTCAAGT +
Preference number: 2 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTEKHKG*HLCPSS
Trigger: ACTTGAAGGACAAAGGTGCCAGCCTTTATGCTTCTC...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTTCTCTGCTTTTCTCATaGAATAGTTCTTTCAGCATA +
Preference number: 2 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATSLLFS*NSSFSI
Trigger: TATGCTGAAAGAACTATTCCATGAGAAAAGCAGAGA...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTTCTGGGAATAGTGAGTaGCTGATCATTAGCTTGCTA +
Preference number: 2 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGSGNSE*LIISLL
Trigger: TAGCAAGCTAATGATCAGTCACTCACTATTCCCAGA...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCCTTAGAAGAGCTTCCTaGAACAAATACCAGAGTTGT +
Preference number: 2 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSLRRAS*NKYQSC
Trigger: ACAACTCTGGTATTTGTTTCAGGAAGCTCTTCTAAG...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCTTCTCATACACTATCTaGCACCAACTCAACTCCAGA +
Preference number: 2 (lower is better)
Translates to: KPARDVLAQTCMFCPALPFSYTI*HQLNSR
Trigger: TCTGGAGTTGAGTTGGTGTCAGATAGTGTATGAGAA...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTTTTACCCCAGACAGATaGGGATCAACTGTAGCATTT +
Preference number: 2 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGFTPDR*GSTVAF
Trigger: AAATGCTACAGTTGATCCTCATCTGTCTGGGGTAAA...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGATTTTCTAGGCTGATCTaGTTCCCAAGAAAGTGTTTT +
Preference number: 2 (lower is better)
Translates to: FESQATLLDESFSSQETRFSRLI*FPRKCF
Trigger: AAAACACTTTCTTGGGAAGCAGATCAGCCTAGAAAA...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATCATTGGAGAAGCAGCTaGATCAGAGGAAACTGTGTC +
Preference number: 2 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYHWRSS*IRGNCV
Trigger: GACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATG...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCCACACCTGTGCGGTCTaGAATGCCTTTATTTTGAAT +
Preference number: 2 (lower is better)
Translates to: KPARDVLAQTCMFCPALPHTCAV*NAFILN
Trigger: ATTCAAAATAAAGGCATTGCAGACCGCACAGGTGTG...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCGAGGTCACACTCATGTaGCTTGATGGACAAAAACAA +
Preference number: 2 (lower is better)
Translates to: KPARDVLAQTCMFCPALPEVTLM*LDGQKQ
Trigger: TTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTC...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCGGAACTGGGAATCAATaGACCATTCCTGGCACATCA +
Preference number: 2 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCGTGNQ*TIPGTS
Trigger: TGATGTGCCAGGAATGGTGCATTGATTCCCAGTTCC...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCAGTGAGTACCCCAGTTaGCTTGGGTTGTATTTACTT +
Preference number: 2 (lower is better)
Translates to: KPARDVLAQTCMFCPALPSEYPS*LGLYLL
Trigger: AAGTAAATACAACCCAAGGCAACTGGGGTACTCACT...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGAAAAGAAGCCCAAGCTaGTTTGCTCTCCGCAGTGTA +
Preference number: 2 (lower is better)
Translates to: LDVALAVHYVISQVVSSGKRSPS*FALRSV
Trigger: TACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTT...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTAGAGAGGAAGACAGGTaGGTAGATAATTGGATGGTG +
Preference number: 2 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSREEDR*VDNWMV
Trigger: CACCATCCAATTATCTACCCACCTGTCTTCCTCTCT...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTAGTGTCTCCCTTGGGTaGATAGGATACCAGATTTTA +
Preference number: 2 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSISVSLG*IGYQIL
Trigger: TAAAATCTGGTATCCTATCCACCCAAGGGAGACACT...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTACAAGACAGCAAAGGTaGCTCAGCTCTTGTTTGTAT +
Preference number: 2 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGTRQQR*LSSCLY
Trigger: ATACAAACAAGAGCTGAGCCACCTTTGCTGTCTTGT...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCACAAGACAGCAAAGGTaGCTCAGCTCTTGTTTGTAT +
Preference number: 2 (lower is better)
Translates to: KPARDVLAQTCMFCPALPTRQQR*LSSCLY
Trigger: ATACAAACAAGAGCTGAGCCACCTTTGCTGTCTTGT...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGATTCTCATCCTCTCTGTaGATCAGTCCCTGCAGCACA +
Preference number: 2 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRFSSSL*ISPCST
Trigger: TGTGCTGCAGGGACTGATCCACAGAGAGGATGAGAA...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATTCAATGCACCATTCCTaGCACATCAGTTACGGTTCC +
Preference number: 2 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYSMHHS*HISYGS
Trigger: GGAACCGTAACTGATGTGCCAGGAATGGTGCATTGA...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAATGCACCATTCCTaGCACATCAGTTACGGTTCC +
Preference number: 2 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCSMHHS*HISYGS
Trigger: GGAACCGTAACTGATGTGCCAGGAATGGTGCATTGA...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGATCATCCCTGGAACTaGGAATCAATGCACCATTCC +
Preference number: 2 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYDHPWN*ESMHHS
Trigger: GGAATGGTGCATTGATTCCCAGTTCCAGGGATGATC...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCCATCTTAGTATCCTTTaGAAGGGGGAACAGCAGGGT +
Preference number: 2 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCHLSIL*KGEQQG
Trigger: ACCCTGCTGTTCCCCCTTCCAAAGGATACTAAGATG...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTTTTTGGACACACCAATaGATGATTATCCTACACGTG +
Preference number: 2 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIFWTHQ*MIILHV
Trigger: CACGTGTAGGATAATCATTCATTGGTGTGTCCAAAA...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTTCAGGGTGTTTATTGTaGGGCTCAATTTTTGCCCAA +
Preference number: 2 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSSGCLL*GSIFAQ
Trigger: TTGGGCAAAAATTGAGCCTCACAATAAACACCCTGA...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTGATGCCAATGTCTGCTaGTGGTGTATAAATGAATAC +
Preference number: 2 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIDANVC*WCINEY
Trigger: GTATTCATTTATACACCATCAGCAGACATTGGCATC...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTGATGCCAATGTCTGCTaGTGGTGTATAAATGAATAC +
Preference number: 2 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGDANVC*WCINEY
Trigger: GTATTCATTTATACACCATCAGCAGACATTGGCATC...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCTATTTTGTTAACCTGTaGGATCGTTGGCTTTCACAG +
Preference number: 2 (lower is better)
Translates to: KPARDVLAQTCMFCPALPYFVNL*DRWLSQ
Trigger: CTGTGAAAGCCAACGATCTCACAGGTTAACAAAATA...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCGGAATAGTGAGTGACTaGTCATTAGCTTGCTACTTT +
Preference number: 2 (lower is better)
Translates to: KPARDVLAQTCMFCPALPGIVSD*SLACYF
Trigger: AAAGTAGCAAGCTAATGATCAGTCACTCACTATTCC...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTTTAGACTGAGGGCCTaGAAAGGTTTTCCAACTGAG +
Preference number: 2 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCFRLRA*KGFPTE
Trigger: CTCAGTTGGAAAACCTTTTCAGGCCCTCAGTCTAAA...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCGTGGACTCTTCACTTTaGATTGCAGAGACAGATGTG +
Preference number: 2 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCVDSSL*IAETDV
Trigger: CACATCTGTCTCTGCAATGCAAAGTGAAGAGTCCAC...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTGGACTCTTCACTTTaGATTGCAGAGACAGATGTG +
Preference number: 2 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYVDSSL*IAETDV
Trigger: CACATCTGTCTCTGCAATGCAAAGTGAAGAGTCCAC...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCCTGTGCGGTCTGCAATaGCTTTATTTTGAATCCCAG +
Preference number: 2 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCLCGLQ*LYFESQ
Trigger: CTGGGATTCAAAATAAAGGCATTGCAGACCGCACAG...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAGGAACTGGGAATCAATaGACCATTCCTGGCACATCA +
Preference number: 2 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRGTGNQ*TIPGTS
Trigger: TGATGTGCCAGGAATGGTGCATTGATTCCCAGTTCC...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCACGTTTTGTTGTGTGTaGCAGAGGATGTTGTTGGGA +
Preference number: 2 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCTFCCV*QRMLLG
Trigger: TCCCAACAACATCCTCTGCCACACACAACAAAACGT...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTAGATTAAACCAGAACTaGAGCAGAAAGGAGACTCTA +
Preference number: 2 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIRLNQN*SRKETL
Trigger: TAGAGTCTCCTTTCTGCTCCAGTTCTGGTTTAATCT...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAGATCATCCCTGGAACTaGGAATCAATGCACCATTCC +
Preference number: 2 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRDHPWN*ESMHHS
Trigger: GGAATGGTGCATTGATTCCCAGTTCCAGGGATGATC...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACACACTCATGTGCCTTaGTGGACAAAAACAAAGAGG +
Preference number: 2 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRHTHVP*WTKTKR
Trigger: CCTCTTTGTTTTTGTCCATCAAGGCACATGAGTGTG...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTATATGCTTCAAAATaGTGGGTGACAGCCACTCTC +
Preference number: 2 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRLYASK*WVTATL
Trigger: GAGAGTGGCTGTCACCCATCATTTTGAAGCATATAG...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTGTGAGGCTCAATTTTTaGCCAAATGAAACTTACGTT +
Preference number: 2 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTVRLNF*PNETYV
Trigger: AACGTAAGTTTCATTTGGGCAAAAATTGAGCCTCAC...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTCTTGGATGTAGCTCTTaGTGTGCACTATGTTATAAG +
Preference number: 2 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSLGCSS*CALCYK
Trigger: CTTATAACATAGTGCACAGCAAGAGCTACATCCAAG...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTTTTTCTAGGCTGATCTaGTTCCCAAGAAAGTGTTTT +
Preference number: 2 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGFSRLI*FPRKCF
Trigger: AAAACACTTTCTTGGGAAGCAGATCAGCCTAGAAAA...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCTTTCTCCCTTCTGTTTaGAGTGTTGTGTTAATCAAG +
Preference number: 2 (lower is better)
Translates to: KPARDVLAQTCMFCPALPFLPSV*SVVLIK
Trigger: CTTGATTAACACAACACTGCAAACAGAAGGGAGAAA...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATACAAGACAGCAAAGGTaGCTCAGCTCTTGTTTGTAT +
Preference number: 2 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYTRQQR*LSSCLY
Trigger: ATACAAACAAGAGCTGAGCCACCTTTGCTGTCTTGT...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CAA 90 bp GTGTTTATTGTGAGGCTCAATTTTTGCCCAAATGAAACTTACGTTTaGTTGTGTGTGGCAGAGGATGTTGTTGGGAATGATGATGAGGAG +
Preference number: 2 (lower is better)
Translates to: VFIVRLNFCPNETYV*LCVAEDVVGNDDEE
Trigger: CTCCTCATCATCATTCCCAACAACATCCTCTGCCACACACAACAAAACGTAAGTTTCATTTGGGCAAAAATTGAGCCTCACAATAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTTTTGGACACACCAATaGATGATTATCCTACACGTG +
Preference number: 2 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCFWTHQ*MIILHV
Trigger: CACGTGTAGGATAATCATTCATTGGTGTGTCCAAAA...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATCTGATGGTGTATAAATaGATACAGTGGGAGAGATAC +
Preference number: 2 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYLMVYK*IQWERY
Trigger: GTATCTCTCCCACTGTATTCATTTATACACCATCAG...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATTATTTTGTTAACCTGTaGGATCGTTGGCTTTCACAG +
Preference number: 2 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYYFVNL*DRWLSQ
Trigger: CTGTGAAAGCCAACGATCTCACAGGTTAACAAAATA...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTATTTTGTTAACCTGTaGGATCGTTGGCTTTCACAG +
Preference number: 2 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCYFVNL*DRWLSQ
Trigger: CTGTGAAAGCCAACGATCTCACAGGTTAACAAAATA...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGGAATAGTGAGTGACTaGTCATTAGCTTGCTACTTT +
Preference number: 2 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYGIVSD*SLACYF
Trigger: AAAGTAGCAAGCTAATGATCAGTCACTCACTATTCC...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATAAAACTTTTCTAGGCTaGTCTGCTTCCCAAGAAAGT +
Preference number: 2 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYKTFLG*SASQES
Trigger: ACTTTCTTGGGAAGCAGATCAGCCTAGAAAAGTTTT...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATCTTAGAAGAGCTTCCTaGAACAAATACCAGAGTTGT +
Preference number: 2 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYLRRAS*NKYQSC
Trigger: ACAACTCTGGTATTTGTTTCAGGAAGCTCTTCTAAG...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGATTTACCCCAGACAGATaGGGATCAACTGTAGCATTT +
Preference number: 2 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRFTPDR*GSTVAF
Trigger: AAATGCTACAGTTGATCCTCATCTGTCTGGGGTAAA...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTTTTTCTAGGCTGATCTaGTTCCCAAGAAAGTGTTTT +
Preference number: 2 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSFSRLI*FPRKCF
Trigger: AAAACACTTTCTTGGGAAGCAGATCAGCCTAGAAAA...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTACCTCTTAAGACAGTaGTTAGCATTTAGTGTGCCA +
Preference number: 2 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCYLLRQ*LAFSVP
Trigger: TGGCACACTAAATGCTAAGCACTGTCTTAAGAGGTA...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCAGATTAAACCAGAACTaGAGCAGAAAGGAGACTCTA +
Preference number: 2 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCRLNQN*SRKETL
Trigger: TAGAGTCTCCTTTCTGCTCCAGTTCTGGTTTAATCT...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCGAAATATGTCTGTTGTaGAGAAGTCATTTTCACTCC +
Preference number: 2 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCEICLL*RSHFHS
Trigger: GGAGTGAAAATGACTTCTTCACAACAGACATATTTC...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGGATGTAGCTCTTaGTGTGCACTATGTTATAAG +
Preference number: 2 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRLGCSS*CALCYK
Trigger: CTTATAACATAGTGCACAGCAAGAGCTACATCCAAG...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGATACCTCTTAAGACAGTaGTTAGCATTTAGTGTGCCA +
Preference number: 2 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRYLLRQ*LAFSVP
Trigger: TGGCACACTAAATGCTAAGCACTGTCTTAAGAGGTA...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CAA 90 bp CAGTGGGAGAGATACAATATGGTTAGAGATTCATATGGGGATGAATaGATAGTGAGTAGTAGGGAGAGAATAGAAAGGAGTGTTAGACAA +
Preference number: 2 (lower is better)
Translates to: QWERYNMVRDSYGDE*IVSSRERIERSVRQ
Trigger: TTGTCTAACACTCCTTTCTATTCTCTCCCTACTACTCACTATCAATTCATCCCCATATGAATCTCTAACCATATTGTATCTCTCCCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTTCAGGGTGTTTATTGTaGGGCTCAATTTTTGCCCAA +
Preference number: 2 (lower is better)
Translates to: IIGHLDVALAVHYVISQVSGCLL*GSIFAQ
Trigger: TTGGGCAAAAATTGAGCCTCACAATAAACACCCTGA...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR GCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAGTGAGGCTCAATTTTTaGCCAAATGAAACTTACGTT +
Preference number: 2 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRVRLNF*PNETYV
Trigger: AACGTAAGTTTCATTTGGGCAAAAATTGAGCCTCAC...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR TCA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTTTTTGGACACACCAATaGATGATTATCCTACACGTG +
Preference number: 2 (lower is better)
Translates to: IIGHLDVALAVHYVISQVFWTHQ*MIILHV
Trigger: CACGTGTAGGATAATCATTCATTGGTGTGTCCAAAA...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTAAGCTCTCGTCGGGGTaGCCTGCCCACTTTGGGGTT +
Preference number: 3 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATKLSSG*PAHFGV
Trigger: AACCCCAAAGTGGGCAGGCAACCCCGACGAGAGCTT...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 72 bp CCTCCTACCATGGGCTGGCGACAGCCAACCAGCACTTaGAAATTCAATGTACAGCCACTCCTGATGCCGCCA +
Preference number: 3 (lower is better)
Translates to: PPTMGWRQPTST*KFNVQPLLMPP
Trigger: TGGCGGCATCAGGAGTGGCTGTACATTGAATTTTCAAGTGCTGGTTGGCTGTCGCCAGCCCATGGTAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CCA 72 bp GATAGGTACCCACCAGAGGGGCATCTTAGTATCCTTTaGAAGGGGGAACAGCAGGGTTCCATAGTGGCCCTG +
Preference number: 3 (lower is better)
Translates to: DRYPPEGHLSIL*KGEQQGSIVAL
Trigger: CAGGGCCACTATGGAACCCTGCTGTTCCCCCTTCCAAAGGATACTAAGATGCCCCTCTGGTGGGTACCTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 72 bp GGTTCCATAGTGGCCCTGAAGCCAGCCTTGTTGGGTTaGGAGGTTCTGATGATCTTGGCCAAAGGAGCATGG +
Preference number: 3 (lower is better)
Translates to: GSIVALKPALLG*EVLMILAKGAW
Trigger: CCATGCTCCTTTGGCCAAGATCATCAGAACCTCTCAACCCAACAAGGCTGGCTTCAGGGCCACTATGGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CCA 72 bp TGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTaGTGTGGAGCAACTCTGTGCCTTAAAGAGGGCACC +
Preference number: 3 (lower is better)
Translates to: WSRVRNLSFSTQ*CGATLCLKEGT
Trigger: GGTGCCCTCTTTAAGGCACAGAGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 72 bp CAACCAGCACTTGAAAATTCAATGTACAGCCACTCCTaGTGCCGCCACAGGGATAAGCTCTCGTCGGGGTTG +
Preference number: 3 (lower is better)
Translates to: QPALENSMYSHS*CRHRDKLSSGL
Trigger: CAACCCCGACGAGAGCTTATCCCTGTGGCGGCATCAGGAGTGGCTGTACATTGAATTTTCAAGTGCTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CCA 72 bp GAGTCCTTCTCGTCCCAGGAGACAAGACAGCAAAGGTaGCTCAGCTCTTGTTTGTATGCTGGGTCTGCTTTG +
Preference number: 3 (lower is better)
Translates to: ESFSSQETRQQR*LSSCLYAGSAL
Trigger: CAAAGCAGACCCAGCATACAAACAAGAGCTGAGCCACCTTTGCTGTCTTGTCTCCTGGGACGAGAAGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CCA 72 bp GATCATCCCTGGAACTGGGAATCAATGCACCATTCCTaGCACATCAGTTACGGTTCCCGAATCTGGCTCCTG +
Preference number: 3 (lower is better)
Translates to: DHPWNWESMHHS*HISYGSRIWLL
Trigger: CAGGAGCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGTTCCAGGGATGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTGTGTGGCAGAGGATGTaGTTGGGAATGATGATGAGG +
Preference number: 3 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATVWQRM*LGMMMR
Trigger: CCTCATCATCATTCCCAACAACATCCTCTGCCACAC...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCTGGCTCAGCTCTTGTTaGTATGCTGGGTCTGCTTTG +
Preference number: 3 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGWLSSC*YAGSAL
Trigger: CAAAGCAGACCCAGCATACAAACAAGAGCTGAGCCA...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTCATGCTTGTTTAGACTaGCAGTCGACTGTATCAGGC +
Preference number: 3 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATHACLD*QSTVSG
Trigger: GCCTGATACAGTCGACTGCAAGTCTAAACAAGCATG...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 72 bp AAAGGTTTTCCAACTGAGGCAGGGCAGGTCTGCGATTaGTGCTGCATTCTCATCCTCTCTGTGGATCAGTCC +
Preference number: 3 (lower is better)
Translates to: KGFPTEAGQVCD*CCILILSVDQS
Trigger: GGACTGATCCACAGAGAGGATGAGAATGCAGCATCAATCGCAGACCTGCCCTGCCTCAGTTGGAAAACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR GCA 72 bp GGATCAGTCCCTGCAGCACACCTGTGCGGTCTGCAATaGCTTTATTTTGAATCCCAGGCAACTTTGCTGGAT +
Preference number: 3 (lower is better)
Translates to: GSVPAAHLCGLQ*LYFESQATLLD
Trigger: ATCCAGCAAAGTTGCCTGGGATTCAAAATAAAGGCATTGCAGACCGCACAGGTGTGCTGCAGGGACTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR GCA 72 bp GATGCTGCATTCTCATCCTCTCTGTGGATCAGTCCCTaGAGCACACCTGTGCGGTCTGCAATGCCTTTATTT +
Preference number: 3 (lower is better)
Translates to: DAAFSSSLWISP*STPVRSAMPLF
Trigger: AAATAAAGGCATTGCAGACCGCACAGGTGTGCTGCAGGGACTGATCCACAGAGAGGATGAGAATGCAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CCA 72 bp CCTGGCACATCAGTTACGGTTCCCGAATCTGGCTCCTaGCAGCTCACTAGGAAATGCAGATGTCTGTTTACA +
Preference number: 3 (lower is better)
Translates to: PGTSVTVPESGS*QLTRKCRCLFT
Trigger: TGTAAACAGACATCTGCATTTCCTAGTGAGCTGCCAGGAGCCAGATTCGGGAACCGTAACTGATGTGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGAGTGTGGCAGAGGATGTaGTTGGGAATGATGATGAGG +
Preference number: 3 (lower is better)
Translates to: FESQATLLDESFSSQETRVWQRM*LGMMMR
Trigger: CCTCATCATCATTCCCAACAACATCCTCTGCCACAC...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTTTTTCTCTCAAGTTCTaGCTGCTAAGGAAAGCCAGC +
Preference number: 3 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATFSLKF*LLRKAS
Trigger: GCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGAAAA...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACGGTGGACTCTTCACTTaGCATTGCAGAGACAGATGT +
Preference number: 3 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDGGLFT*HCRDRC
Trigger: ACATCTGTCTCTGCAATGCAAAGTGAAGAGTCCACC...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAAGGTGGCTCAGCTCTaGTTTGTATGCTGGGTCTGC +
Preference number: 3 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSKVAQL*FVCWVC
Trigger: GCAGACCCAGCATACAAACAAGAGCTGAGCCACCTT...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCGAATCCCAGGCAACTTaGCTGGATGAGTCCTTCTCG +
Preference number: 3 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSESQAT*LDESFS
Trigger: CGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTC...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTAAAGTCAGTATGGAATaGAGGAAAGATGCCCCACCA +
Preference number: 3 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATKVSME*RKDAPP
Trigger: TGGTGGGGCATCTTTCCTCAATTCCATACTGACTTT...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 72 bp ATTAAACCAGAACTGGAGCAGAAAGGAGACTCTAGCTaGAGTCATCCCACTCAGGCGGGTGGACTCTTCACT +
Preference number: 3 (lower is better)
Translates to: IKPELEQKGDSS*SHPTQAGGLFT
Trigger: AGTGAAGAGTCCACCCGCCTGAGTGGGATGACTTCAGCTAGAGTCTCCTTTCTGCTCCAGTTCTGGTTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACCAGATAATAGGACACTaGGATGTAGCTCTTGCTGTG +
Preference number: 3 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDQIIGH*DVALAV
Trigger: CACAGCAAGAGCTACATCCAAGTGTCCTATTATCTG...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACTTTTCTCTCAAGTTCTaGCTGCTAAGGAAAGCCAGC +
Preference number: 3 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDFSLKF*LLRKAS
Trigger: GCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGAAAA...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCTGGCTCAGCTCTTGTTaGTATGCTGGGTCTGCTTTG +
Preference number: 3 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSWLSSC*YAGSAL
Trigger: CAAAGCAGACCCAGCATACAAACAAGAGCTGAGCCA...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTAAGGTGGCTCAGCTCTaGTTTGTATGCTGGGTCTGC +
Preference number: 3 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIKVAQL*FVCWVC
Trigger: GCAGACCCAGCATACAAACAAGAGCTGAGCCACCTT...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCAGGGCAGGTCTGCGATaGATGCTGCATTCTCATCCT +
Preference number: 3 (lower is better)
Translates to: KPARDVLAQTCMFCPALPRAGLR*MLHSHP
Trigger: AGGATGAGAATGCAGCATCAATCGCAGACCTGCCCT...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTTCAGACTTGTATGTTTaGTCCTGCCTTGCCCCCACC +
Preference number: 3 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGSDLYV*SCLAPT
Trigger: GGTGGGGGCAAGGCAGGACAAAACATACAAGTCTGA...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 72 bp GTGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTaGTGGACAAAAACAAAGAGGACACTGATACCAGAG +
Preference number: 3 (lower is better)
Translates to: VFPHGRGHTHVP*WTKTKRTLIPE
Trigger: CTCTGGTATCAGTGTCCTCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR GCA 72 bp ACACCTTACCTTTTCTTCTGTTTCGTGGAGCACAGTTaGAGCAGAACAGCCATGCGCAGTGCTCTGCATAAA +
Preference number: 3 (lower is better)
Translates to: TPYLFFCFVEHS*SRTAMRSALHK
Trigger: TTTATGCAGAGCACTGCGCATGGCTGTTCTGCTGCAACTGTGCTCCACGAAACAGAAGAAAAGGTAAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CCA 72 bp TCTGATTTTGCGCCTGCTCATGATCATCCCTGGAACTaGGAATCAATGCACCATTCCTGGCACATCAGTTAC +
Preference number: 3 (lower is better)
Translates to: SDFAPAHDHPWN*ESMHHSWHISY
Trigger: GTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGTTCCAGGGATGATCATGAGCAGGCGCAAAATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTTGGCTCAGCTCTTGTTaGTATGCTGGGTCTGCTTTG +
Preference number: 3 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGWLSSC*YAGSAL
Trigger: CAAAGCAGACCCAGCATACAAACAAGAGCTGAGCCA...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTGAATCCCAGGCAACTTaGCTGGATGAGTCCTTCTCG +
Preference number: 3 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSESQAT*LDESFS
Trigger: CGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTC...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTAAAGGGATTGACAATTaGCTTTTGTGTGTGTGTTGG +
Preference number: 3 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATKGIDN*LLCVCW
Trigger: CCAACACACACACAAAAGCAAATTGTCAATCCCTTT...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCAATGAAACTTACGTTTaGTTGTGTGTGGCAGAGGAT +
Preference number: 3 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGNETYV*LCVAED
Trigger: ATCCTCTGCCACACACAACAAAACGTAAGTTTCATT...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCCAGATAATAGGACACTaGGATGTAGCTCTTGCTGTG +
Preference number: 3 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSQIIGH*DVALAV
Trigger: CACAGCAAGAGCTACATCCAAGTGTCCTATTATCTG...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTGGTGGACTCTTCACTTaGCATTGCAGAGACAGATGT +
Preference number: 3 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGGGLFT*HCRDRC
Trigger: ACATCTGTCTCTGCAATGCAAAGTGAAGAGTCCACC...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACCTTTCTCCCTTCTGTTaGCAGTGTTGTGTTAATCAA +
Preference number: 3 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDLSPFC*QCCVNQ
Trigger: TTGATTAACACAACACTGCAAACAGAAGGGAGAAAG...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCAGGGCAGGTCTGCGATaGATGCTGCATTCTCATCCT +
Preference number: 3 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCRAGLR*MLHSHP
Trigger: AGGATGAGAATGCAGCATCAATCGCAGACCTGCCCT...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGAGGTTCTGATGATCTaGGCCAAAGGAGCATGGACC +
Preference number: 3 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYEVLMI*AKGAWT
Trigger: GGTCCATGCTCCTTTGGCCAAGATCATCAGAACCTC...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTGTTGTATTTACTTTGTaGTCTTTACCCCAGACAGAT +
Preference number: 3 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATVVFTL*SLPQTD
Trigger: ATCTGTCTGGGGTAAAGACAACAAAGTAAATACAAC...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 72 bp CAGTTGCTCAAGTGCCCTCAGCTTAGAAGAGCTTCCTaGAACAAATACCAGAGTTGTCAATACACCCGCCAT +
Preference number: 3 (lower is better)
Translates to: QLLKCPQLRRAS*NKYQSCQYTRH
Trigger: ATGGCGGGTGTATTGACAACTCTGGTATTTGTTTCAGGAAGCTCTTCTAAGCTGAGGGCACTTGAGCAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTGAGCAGACCCCATTTTaGGACACACCAATGAATGAT +
Preference number: 3 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTEQTPF*DTPMND
Trigger: ATCATTCATTGGTGTGTCCAAAAATGGGGTCTGCTC...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCCCACAACACAGGGTATaGCTTTTGTATTTTGTTAAC +
Preference number: 3 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGPQHRV*LLYFVN
Trigger: GTTAACAAAATACAAAAGCAATACCCTGTGTTGTGG...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCTTTTCTCTCAAGTTCTaGCTGCTAAGGAAAGCCAGC +
Preference number: 3 (lower is better)
Translates to: KPARDVLAQTCMFCPALPFSLKF*LLRKAS
Trigger: GCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGAAAA...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGAACTCTTCACTTTGCATaGCAGAGACAGATGTGTTTT +
Preference number: 3 (lower is better)
Translates to: FESQATLLDESFSSQETRTLHFA*QRQMCF
Trigger: AAAACACATCTGTCTCTGCAATGCAAAGTGAAGAGT...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAAACAAATACCAGAGTaGTCAATACACCCGCCATGT +
Preference number: 3 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSKQIPE*SIHPPC
Trigger: ACATGGCGGGTGTATTGACAACTCTGGTATTTGTTT...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCCCTTTAATTCTGATTTaGCGCCTGCTCATGATCATC +
Preference number: 3 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSPLILI*RLLMII
Trigger: GATGATCATGAGCAGGCGCAAAATCAGAATTAAAGG...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CCA 72 bp TTTAATTCTGATTTTGCGCCTGCTCATGATCATCCCTaGAACTGGGAATCAATGCACCATTCCTGGCACATC +
Preference number: 3 (lower is better)
Translates to: FNSDFAPAHDHP*NWESMHHSWHI
Trigger: GATGTGCCAGGAATGGTGCATTGATTCCCAGTTCCAGGGATGATCATGAGCAGGCGCAAAATCAGAATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCACTCTTCACTTTGCATaGCAGAGACAGATGTGTTTT +
Preference number: 3 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSTLHFA*QRQMCF
Trigger: AAAACACATCTGTCTCTGCAATGCAAAGTGAAGAGT...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTTGCAATGCCTTTATTTaGAATCCCAGGCAACTTTGC +
Preference number: 3 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGCNAFI*NPRQLC
Trigger: GCAAAGTTGCCTGGGATTCAAAATAAAGGCATTGCA...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCCCTTTAATTCTGATTTaGCGCCTGCTCATGATCATC +
Preference number: 3 (lower is better)
Translates to: KPARDVLAQTCMFCPALPPLILI*RLLMII
Trigger: GATGATCATGAGCAGGCGCAAAATCAGAATTAAAGG...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTCCTTTAATTCTGATTTaGCGCCTGCTCATGATCATC +
Preference number: 3 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIPLILI*RLLMII
Trigger: GATGATCATGAGCAGGCGCAAAATCAGAATTAAAGG...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 72 bp CTAGCCTGTAGGCATTCTCCATGTACTCTCCGTGTGTaGAGTTGGAAAAGTGTGGATATTGTCTTGTGTAAG +
Preference number: 3 (lower is better)
Translates to: LACRHSPCTLRV*SWKSVDIVLCK
Trigger: CTTACACAAGACAATATCCACACTTTTCCAACTTCACACACGGAGAGTACATGGAGAATGCCTACAGGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 72 bp GCACTTTCATTGGCATTACTTTGGTGGAAGTGCATATaGACTCTGTTTTGGGAAGGGGAAGGGTTTCAGAGT +
Preference number: 3 (lower is better)
Translates to: ALSLALLWWKCI*TLFWEGEGFQS
Trigger: ACTCTGAAACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCAATGAAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CCA 72 bp TGCTACTTTGGCCTATCTGTTAGTGTCTCCCTTGGGTaGATAGGATACCAGATTTTAAAGAGTCCACAACAC +
Preference number: 3 (lower is better)
Translates to: CYFGLSVSVSLG*IGYQILKSPQH
Trigger: GTGTTGTGGACTCTTTAAAATCTGGTATCCTATCCACCCAAGGGAGACACTAACAGATAGGCCAAAGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGAACTCTTCACTTTGCATaGCAGAGACAGATGTGTTTT +
Preference number: 3 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRTLHFA*QRQMCF
Trigger: AAAACACATCTGTCTCTGCAATGCAAAGTGAAGAGT...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTCTTTCTCCCTTCTGTTaGCAGTGTTGTGTTAATCAA +
Preference number: 3 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGLSPFC*QCCVNQ
Trigger: TTGATTAACACAACACTGCAAACAGAAGGGAGAAAG...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAGAGCAGACCCCATTTTaGGACACACCAATGAATGAT +
Preference number: 3 (lower is better)
Translates to: LIWLPFHVENLQEMYLLREQTPF*DTPMND
Trigger: ATCATTCATTGGTGTGTCCAAAAATGGGGTCTGCTC...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCCCACAACACAGGGTATaGCTTTTGTATTTTGTTAAC +
Preference number: 3 (lower is better)
Translates to: KPARDVLAQTCMFCPALPPQHRV*LLYFVN
Trigger: GTTAACAAAATACAAAAGCAATACCCTGTGTTGTGG...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATAAACAAATACCAGAGTaGTCAATACACCCGCCATGT +
Preference number: 3 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYKQIPE*SIHPPC
Trigger: ACATGGCGGGTGTATTGACAACTCTGGTATTTGTTT...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 72 bp GTTTTAGAAAACACAGGCTCTTCTGGGAATAGTGAGTaGCTGATCATTAGCTTGCTACTTTGGCCTATCTGT +
Preference number: 3 (lower is better)
Translates to: VLENTGSSGNSE*LIISLLLWPIC
Trigger: ACAGATAGGCCAAAGTAGCAAGCTAATGATCAGTCACTCACTATTCCCAGAAGAGCCTGTGTTTTCTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR GCA 72 bp GCACTTGACATTAAACTACTGAAAAACAAGCTTGGCTaGAGCCTTAACACGAGCACTTTCATTGGCATTACT +
Preference number: 3 (lower is better)
Translates to: ALDIKLLKNKLG*SLNTSTFIGIT
Trigger: AGTAATGCCAATGAAAGTGCTCGTGTTAAGGCTGCAGCCAAGCTTGTTTTTCAGTAGTTTAATGTCAAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAGAAACTTACGTTTTGTaGTGTGTGGCAGAGGATGTT +
Preference number: 3 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRETYVL*CVAEDV
Trigger: AACATCCTCTGCCACACACAACAAAACGTAAGTTTC...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATCTTTCTCCCTTCTGTTaGCAGTGTTGTGTTAATCAA +
Preference number: 3 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYLSPFC*QCCVNQ
Trigger: TTGATTAACACAACACTGCAAACAGAAGGGAGAAAG...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATCCACAACACAGGGTATaGCTTTTGTATTTTGTTAAC +
Preference number: 3 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYPQHRV*LLYFVN
Trigger: GTTAACAAAATACAAAAGCAATACCCTGTGTTGTGG...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR-3UTR CAA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCGTTGTATTTACTTTGTaGTCTTTACCCCAGACAGAT +
Preference number: 3 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCVVFTL*SLPQTD
Trigger: ATCTGTCTGGGGTAAAGACAACAAAGTAAATACAAC...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR GCA 72 bp TTTCTCCCTTCTGTTTGCAGTGTTGTGTTAATCAAGTaGTTGAAAATTAAGTCAGTTGCTCAAGTGCCCTCA +
Preference number: 3 (lower is better)
Translates to: FLPSVCSVVLIK*LKIKSVAQVPS
Trigger: TGAGGGCACTTGAGCAACTGACTTAATTTTCAAGCACTTGATTAACACAACACTGCAAACAGAAGGGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CCA 72 bp ATTTTTGCCCAAATGAAACTTACGTTTTGTTGTGTGTaGCAGAGGATGTTGTTGGGAATGATGATGAGGAGA +
Preference number: 3 (lower is better)
Translates to: IFAQMKLTFCCV*QRMLLGMMMRR
Trigger: TCTCCTCATCATCATTCCCAACAACATCCTCTGCCACACACAACAAAACGTAAGTTTCATTTGGGCAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 72 bp GTACACTGCACAATCACAACCATCTCGTATTCATCCTaGATTAGAAAAGGTTACAACTACAATGTAACATGC +
Preference number: 3 (lower is better)
Translates to: VHCTITTISYSS*IRKGYNYNVTC
Trigger: GCATGTTACATTGTAGTTGTAACCTTTTCTAATTCAGGATGAATACGAGATGGTTGTGATTGTGCAGTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR TCA 72 bp AAGTTGAAAGATAATTTTGAAGATGCCAATGTCTGCTaGTGGTGTATAAATGAATACAGTGGGAGAGATACA +
Preference number: 3 (lower is better)
Translates to: KLKDNFEDANVC*WCINEYSGRDT
Trigger: TGTATCTCTCCCACTGTATTCATTTATACACCATCAGCAGACATTGGCATCTTCAAAATTATCTTTCAACTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CAA 72 bp CCCTCCTACCATGGGCTGGCGACAGCCAACCAGCACTaGAAAATTCAATGTACAGCCACTCCTGATGCCGCC +
Preference number: 4 (lower is better)
Translates to: PSYHGLATANQH*KIQCTATPDAA
Trigger: GGCGGCATCAGGAGTGGCTGTACATTGAATTTTCAAGTGCTGGTTGGCTGTCGCCAGCCCATGGTAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGTCGGTGGCCGTCCTCTaGAGCCCGGTCGGCGACTCG +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVSVAVL*SPVGDS
Trigger: CGAGTCGCCGACCGGGCTGCAGAGGACGGCCACCGA...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374778.4
CDS-3UTR CCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATAGGGTCGTCCGGTCGGTaGCCGTCCTCTGCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIGSSGR*PSSAAR
Trigger: CCGGGCTGCAGAGGACGGCCACCGACCGGACGACCC...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374778.4
CDS-3UTR GCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTTTCGTGGAGCACAGTTaGAGCAGAACAGCCATGCGC +
Preference number: 4 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATFVEHS*SRTAMR
Trigger: GCGCATGGCTGTTCTGCTGCAACTGTGCTCCACGAA...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGAAGCTCTCGTCGGGGTTaGCTGCCCACTTTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: FESQATLLDESFSSQETRSSRRG*LPTLGF
Trigger: GAACCCCAAAGTGGGCAGGCAACCCCGACGAGAGCT...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGATTCTTGACGCTCCCCTaGGGAGGAGGGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRFLTLP*GGGRRP
Trigger: TGGCCGCCTCCCTCCTCCCCAGGGGAGCGTCAAGAA...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS-3UTR CCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGACCTCCTACCATGGGCTaGCGACAGCCAACCAGCACT +
Preference number: 4 (lower is better)
Translates to: FESQATLLDESFSSQETRPPTMG*RQPTST
Trigger: AGTGCTGGTTGGCTGTCGCCAGCCCATGGTAGGAGG...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
3UTR CAA 72 bp GGGTTCCATAGTGGCCCTGAAGCCAGCCTTGTTGGGTaGAGAGGTTCTGATGATCTTGGCCAAAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: GFHSGPEASLVG*RGSDDLGQRSM
Trigger: CATGCTCCTTTGGCCAAGATCATCAGAACCTCTCAACCCAACAAGGCTGGCTTCAGGGCCACTATGGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACGGGCTCTCCGGAGTCTaGGAATTCTTCCTCAGATCC +
Preference number: 4 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDGLSGV*EFFLRS
Trigger: GGATCTGAGGAAGAATTCTCAGACTCCGGAGAGCCC...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS-3UTR TCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTCGGGACGTTTTGGGATaGTTGTCTGTCTGCACAGAG +
Preference number: 4 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATRDVLG*LSVCTE
Trigger: CTCTGTGCAGACAGACAATCATCCCAAAACGTCCCG...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACCTGGCCTTCCTTGACTaGCAGGTGTCTCCATGTCAC +
Preference number: 4 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDLAFLD*QVSPCH
Trigger: GTGACATGGAGACACCTGTCAGTCAAGGAAGGCCAG...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCGCCCTTCTGACCGACTaGAACACCAGTGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGALLTD*NTSVLG
Trigger: GCCAAGAACACTGGTGTTTCAGTCGGTCAGAAGGGC...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTAAAGGAGACTCTAGCTaGAGTCATCCCACTCAGGCG +
Preference number: 4 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATKGDSS*SHPTQA
Trigger: CGCCTGAGTGGGATGACTTCAGCTAGAGTCTCCTTT...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACGGGCAGGTCTGCGATTaGTGCTGCATTCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDGQVCD*CCILIL
Trigger: GAGGATGAGAATGCAGCATCAATCGCAGACCTGCCC...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTGCATTTCTCTCCCTCTaGAACGTGGCTGGGATAGGT +
Preference number: 4 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATAFLSL*NVAGIG
Trigger: ACCTATCCCAGCCACGTTTCAGAGGGAGAGAAATGC...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCTTCGTGGAGCACAGTTaGAGCAGAACAGCCATGCGC +
Preference number: 4 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGFVEHS*SRTAMR
Trigger: GCGCATGGCTGTTCTGCTGCAACTGTGCTCCACGAA...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCTCGTACTCCCCGGACTaGTCTCGCTTGATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGSYSPD*SRLMSE
Trigger: CTCTGACATCAAGCGAGACCAGTCCGGGGAGTACGA...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCCCCAGGCAACTTTGCTaGATGAGTCCTTCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGPRQLC*MSPSRP
Trigger: GGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGG...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGACCTCCCCTCCTACCATaGGCTGGCGACAGCCAACCA +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRPPLLP*AGDSQP
Trigger: TGGTTGGCTGTCGCCAGCCCATGGTAGGAGGGGAGG...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTCATCTATGGTACACCTaGGGGTGGCGCTCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGHLWYT*GWRSPP
Trigger: AGGGGGAGAGCGCCACCCTCAGGTGTACCATAGATG...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS-3UTR TCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGCATCTATGGTACACCTaGGGGTGGCGCTCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWHLWYT*GWRSPP
Trigger: AGGGGGAGAGCGCCACCCTCAGGTGTACCATAGATG...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331898.11
ENST00000374778.4
CDS-3UTR TCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCCAGGCCCATACAATGTaGTGCTGGCATTGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGQAHTM*CWHWCS
Trigger: GGAACACCAATGCCAGCATCACATTGTATGGGCCTG...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331898.11
ENST00000612177.4
CDS-3UTR TCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCAAAAGGTTTTCCAACTaGGGCAGGGCAGGTCTGCGA +
Preference number: 4 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGKRFSN*GRAGLR
Trigger: TCGCAGACCTGCCCTGCCTCAGTTGGAAAACCTTTT...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTGCTGTCATAAAAAGCTaGGGCTTCAAGGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATAVIKS*GFKERR
Trigger: CCTCCTCTCCTTGAAGCCGCAGCTTTTTATGACAGC...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS-3UTR GCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACACGTGGTAGAACCCTaGCCACCCCGCCCCCAACCC +
Preference number: 4 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRHVVEP*PPRPQP
Trigger: GGGTTGGGGGCGGGGTGGGCAGGGTTCTACCACGTG...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCCTGTGGATCAGTCCCTaGAGCACACCTGTGCGGTCT +
Preference number: 4 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSLWISP*STPVRS
Trigger: AGACCGCACAGGTGTGCTGCAGGGACTGATCCACAG...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTCTCGTCGGGGTTGCCTaGCCACTTTGGGGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTLVGVA*PLWGSL
Trigger: CAGAGAACCCCAAAGTGGGCAGGCAACCCCGACGAG...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGCTCGTCGGGGTTGCCTaGCCACTTTGGGGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWLVGVA*PLWGSL
Trigger: CAGAGAACCCCAAAGTGGGCAGGCAACCCCGACGAG...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTAGCTCTCGTCGGGGTTaGCTGCCCACTTTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGSSRRG*LPTLGF
Trigger: GAACCCCAAAGTGGGCAGGCAACCCCGACGAGAGCT...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTTCACTTACAAAGCCCTaGCCTTCCTTGACTGACAGG +
Preference number: 4 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATSLTKP*PSLTDR
Trigger: CCTGTCAGTCAAGGAAGGCCAGGGCTTTGTAAGTGA...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCACTGGAATTCAGCCATaGGGACTGCAGAGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGTGIQP*GLQRLH
Trigger: GTGAAGCCTCTGCAGTCCCCATGGCTGAATTCCAGT...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACTCCCACTCAGGCGGGTaGACTCTTCACTTTGCATTG +
Preference number: 4 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDSHSGG*TLHFAL
Trigger: CAATGCAAAGTGAAGAGTCCACCCGCCTGAGTGGGA...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGACCCAGGCAACTTTGCTaGATGAGTCCTTCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: FESQATLLDESFSSQETRPRQLC*MSPSRP
Trigger: GGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGG...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGACCCGAATCTGGCTCCTaGCAGCTCACTAGGAAATGC +
Preference number: 4 (lower is better)
Translates to: FESQATLLDESFSSQETRPESGS*QLTRKC
Trigger: GCATTTCCTAGTGAGCTGCCAGGAGCCAGATTCGGG...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGACCTCCTACCATGGGCTaGCGACAGCCAACCAGCACT +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRPPTMG*RQPTST
Trigger: AGTGCTGGTTGGCTGTCGCCAGCCCATGGTAGGAGG...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGGCGCACGGGCACTCATaGACAGATGTACGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWAHGHS*TDVRVP
Trigger: GGGGACACGTACATCTGTCCATGAGTGCCCGTGCGC...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374778.4
CDS-3UTR TCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAAGCCCTGGCCTTCCTTaGCTGACAGGTGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRSPGLP*LTGVSM
Trigger: CATGGAGACACCTGTCAGTCAAGGAAGGCCAGGGCT...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTAGCCCTGGCCTTCCTTaGCTGACAGGTGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGSPGLP*LTGVSM
Trigger: CATGGAGACACCTGTCAGTCAAGGAAGGCCAGGGCT...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGAGCATTTCTCTCCCTCTaGAACGTGGCTGGGATAGGT +
Preference number: 4 (lower is better)
Translates to: FESQATLLDESFSSQETRAFLSL*NVAGIG
Trigger: ACCTATCCCAGCCACGTTTCAGAGGGAGAGAAATGC...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCATGTACAGCCACTCCTaGTGCCGCCACAGGGATAAG +
Preference number: 4 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSMYSHS*CRHRDK
Trigger: CTTATCCCTGTGGCGGCATCAGGAGTGGCTGTACAT...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCCATCGTTCAACGCGCTaGATTCGTACTCCCCGGACT +
Preference number: 4 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSHRSTR*IRTPRT
Trigger: AGTCCGGGGAGTACGAATGCAGCGCGTTGAACGATG...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCCCAGAGACAAGCCAGTaGTCTGGAGGCCGAGTTTAC +
Preference number: 4 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSPETSQ*SGGRVY
Trigger: GTAAACTCGGCCTCCAGAGCACTGGCTTGTCTCTGG...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACTGGAGAAGCAGGCGTTaGTCAGAGGACCTAGGATTT +
Preference number: 4 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDWRSRR*SEDLGF
Trigger: AAATCCTAGGTCCTCTGAGCAACGCCTGCTTCTCCA...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGACTGTGGATCAGTCCCTaGAGCACACCTGTGCGGTCT +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRLWISP*STPVRS
Trigger: AGACCGCACAGGTGTGCTGCAGGGACTGATCCACAG...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACTCACTTACAAAGCCCTaGCCTTCCTTGACTGACAGG +
Preference number: 4 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDSLTKP*PSLTDR
Trigger: CCTGTCAGTCAAGGAAGGCCAGGGCTTTGTAAGTGA...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTTCCCAAGCTTGTTCGTaGCCACACAAGTATAGTTCC +
Preference number: 4 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATSQACS*PHKYSS
Trigger: GGAACTATACTTGTGTGGCCACGAACAAGCTTGGGA...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGAGACAAGCCAGTGCTCTaGAGGCCGAGTTTACACCAT +
Preference number: 4 (lower is better)
Translates to: FESQATLLDESFSSQETRDKPVL*RPSLHH
Trigger: ATGGTGTAAACTCGGCCTCCAGAGCACTGGCTTGTC...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCCTTCCCCAAAGCCATTaGAGAAGCAGCTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGLPQSH*RSSCIR
Trigger: TCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTGATCATCCCTGGAACTaGGAATCAATGCACCATTCC +
Preference number: 4 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATDHPWN*ESMHHS
Trigger: GGAATGGTGCATTGATTCCCAGTTCCAGGGATGATC...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTGCTCATGATCATCCCTaGAACTGGGAATCAATGCAC +
Preference number: 4 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATAHDHP*NWESMH
Trigger: GTGCATTGATTCCCAGTTCCAGGGATGATCATGAGC...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCGTTGCCTGCCCACTTTaGGGTTCTCTGCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGVACPL*GSLLFS
Trigger: TGAGAAAAGCAGAGAACCCCAAAGTGGGCAGGCAAC...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATCCTCCCCTCCTACCATaGGCTGGCGACAGCCAACCA +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYPPLLP*AGDSQP
Trigger: TGGTTGGCTGTCGCCAGCCCATGGTAGGAGGGGAGG...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCCCTCCCCTCCTACCATaGGCTGGCGACAGCCAACCA +
Preference number: 4 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCPPLLP*AGDSQP
Trigger: TGGTTGGCTGTCGCCAGCCCATGGTAGGAGGGGAGG...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
3UTR CAA 72 bp CAGGAGACAAGACAGCAAAGGTGGCTCAGCTCTTGTTaGTATGCTGGGTCTGCTTTGAACCTGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QETRQQRWLSSC*YAGSALNLKSW
Trigger: CCAGCTCTTCAGGTTCAAAGCAGACCCAGCATACAAACAAGAGCTGAGCCACCTTTGCTGTCTTGTCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CAA 72 bp GTCCCAGGAGACAAGACAGCAAAGGTGGCTCAGCTCTaGTTTGTATGCTGGGTCTGCTTTGAACCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: VPGDKTAKVAQL*FVCWVCFEPEE
Trigger: CTCTTCAGGTTCAAAGCAGACCCAGCATACAAACAAGAGCTGAGCCACCTTTGCTGTCTTGTCTCCTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACCCACATTTTGGATCATaGTGCTGTACTGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDPHFGS*CCTGLV
Trigger: CACCAACCCAGTACAGCATCATGATCCAAAATGTGG...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGAACTTGCACTATTAGGTaGACCCGGGACGTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: FESQATLLDESFSSQETRTCTIR*TRDVLG
Trigger: TCCCAAAACGTCCCGGGTTCACCTAATAGTGCAAGT...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGACTGGCCTTCCTTGACTaGCAGGTGTCTCCATGTCAC +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRLAFLD*QVSPCH
Trigger: GTGACATGGAGACACCTGTCAGTCAAGGAAGGCCAG...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTAGCCCTGGCCTTCCTTaGCTGACAGGTGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSSPGLP*LTGVSM
Trigger: CATGGAGACACCTGTCAGTCAAGGAAGGCCAGGGCT...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAGCCCTTCTGACCGACTaGAACACCAGTGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRALLTD*NTSVLG
Trigger: GCCAAGAACACTGGTGTTTCAGTCGGTCAGAAGGGC...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTCTCAGGATGCCCTTCTaGCCGACTGAAACACCAGTG +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTLRMPF*PTETPV
Trigger: CACTGGTGTTTCAGTCGGTCAGAAGGGCATCCTGAG...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTCTCAGGATGCCCTTCTaGCCGACTGAAACACCAGTG +
Preference number: 4 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGLRMPF*PTETPV
Trigger: CACTGGTGTTTCAGTCGGTCAGAAGGGCATCCTGAG...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCACCTGGTTTCTTCCTTaGACCACTGGAATTCAGCCA +
Preference number: 4 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGTWFLP*TTGIQP
Trigger: TGGCTGAATTCCAGTGGTTCAAGGAAGAAACCAGGT...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGGGCAACTTTGCTGGATaGGTCCTTCTCGTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWGNFAG*VLLVPG
Trigger: TCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCC...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTGGGCAGGTCTGCGATTaGTGCTGCATTCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTGQVCD*CCILIL
Trigger: GAGGATGAGAATGCAGCATCAATCGCAGACCTGCCC...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAGGGCAGGTCTGCGATTaGTGCTGCATTCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRGQVCD*CCILIL
Trigger: GAGGATGAGAATGCAGCATCAATCGCAGACCTGCCC...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTCAGCCAACCAGCACTTaGAAATTCAATGTACAGCCA +
Preference number: 4 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATQPTST*KFNVQP
Trigger: TGGCTGTACATTGAATTTTCAAGTGCTGGTTGGCTG...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTGGCACACCCATTGTCTaGCACAGCTATAACGGCACC +
Preference number: 4 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGGTPIV*HSYNGT
Trigger: GGTGCCGTTATAGCTGTGTCAGACAATGGGTGTGCC...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGAGGCACACCCATTGTCTaGCACAGCTATAACGGCACC +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRGTPIV*HSYNGT
Trigger: GGTGCCGTTATAGCTGTGTCAGACAATGGGTGTGCC...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGAAGATTGCGCTTTCTCTaGCTCTCTCTTCGAGACGCT +
Preference number: 4 (lower is better)
Translates to: FESQATLLDESFSSQETRRLRFL*LSLRDA
Trigger: AGCGTCTCGAAGAGAGAGGCAGAGAAAGCGCAATCT...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS-3UTR GCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTCATCGTTCAACGCGCTaGATTCGTACTCCCCGGACT +
Preference number: 4 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIHRSTR*IRTPRT
Trigger: AGTCCGGGGAGTACGAATGCAGCGCGTTGAACGATG...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGACATCGTTCAACGCGCTaGATTCGTACTCCCCGGACT +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRHRSTR*IRTPRT
Trigger: AGTCCGGGGAGTACGAATGCAGCGCGTTGAACGATG...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGCATCGTTCAACGCGCTaGATTCGTACTCCCCGGACT +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWHRSTR*IRTPRT
Trigger: AGTCCGGGGAGTACGAATGCAGCGCGTTGAACGATG...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGATTCAGCCATGGGGACTaGAGAGGCTTCACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRFSHGD*RGFTAQ
Trigger: CTGAGCTGTGAAGCCTCTGCAGTCCCCATGGCTGAA...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTTTCAGCCATGGGGACTaGAGAGGCTTCACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTFSHGD*RGFTAQ
Trigger: CTGAGCTGTGAAGCCTCTGCAGTCCCCATGGCTGAA...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGACCAGAGACAAGCCAGTaGTCTGGAGGCCGAGTTTAC +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRPETSQ*SGGRVY
Trigger: GTAAACTCGGCCTCCAGAGCACTGGCTTGTCTCTGG...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTCCAGAGACAAGCCAGTaGTCTGGAGGCCGAGTTTAC +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTPETSQ*SGGRVY
Trigger: GTAAACTCGGCCTCCAGAGCACTGGCTTGTCTCTGG...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTCACGTGGTAGAACCCTaGCCACCCCGCCCCCAACCC +
Preference number: 4 (lower is better)
Translates to: IIGHLDVALAVHYVISQVHVVEP*PPRPQP
Trigger: GGGTTGGGGGCGGGGTGGGCAGGGTTCTACCACGTG...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGCTCGTCGGGGTTGCCTaGCCACTTTGGGGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGLVGVA*PLWGSL
Trigger: CAGAGAACCCCAAAGTGGGCAGGCAACCCCGACGAG...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGAGCTCTCGTCGGGGTTaGCTGCCCACTTTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGSSRRG*LPTLGF
Trigger: GAACCCCAAAGTGGGCAGGCAACCCCGACGAGAGCT...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACGGAATTGAGGAAAGATaGCCCACCACCAGATCTTAC +
Preference number: 4 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDGIEER*PTTRSY
Trigger: GTAAGATCTGGTGGTGGGGCATCTTTCCTCAATTCC...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCTACACCATCAATGACTaGTCCAGGCCCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPYTIND*SRPCHC
Trigger: GCAGTGGCAGGGCCTGGAGCAGTCATTGATGGTGTA...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541867.5
CDS-3UTR CCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTGATGCTGTACTGGGTTaGTGTATTGACCAGGATGAT +
Preference number: 4 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATDAVLG*CIDQDD
Trigger: ATCATCCTGGTCAATACACCAACCCAGTACAGCATC...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTTCGTACTCCCCGGACTaGTCTCGCTTGATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSISYSPD*SRLMSE
Trigger: CTCTGACATCAAGCGAGACCAGTCCGGGGAGTACGA...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGTCGTACTCCCCGGACTaGTCTCGCTTGATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWSYSPD*SRLMSE
Trigger: CTCTGACATCAAGCGAGACCAGTCCGGGGAGTACGA...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCTCGTACTCCCCGGACTaGTCTCGCTTGATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPSYSPD*SRLMSE
Trigger: CTCTGACATCAAGCGAGACCAGTCCGGGGAGTACGA...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACAAAAGAAGCCCAAGCTaGTTTGCTCTCCGCAGTGTA +
Preference number: 4 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDKRSPS*FALRSV
Trigger: TACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTT...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCCACCCGCCATGTAATTaGCCTCCATCAGCTTTTTAC +
Preference number: 4 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGHPPCN*PPSAFY
Trigger: GTAAAAAGCTGATGGAGGCCAATTACATGGCGGGTG...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGCCCGAATCTGGCTCCTaGCAGCTCACTAGGAAATGC +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWPESGS*QLTRKC
Trigger: GCATTTCCTAGTGAGCTGCCAGGAGCCAGATTCGGG...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACTTGGCCAAAGGAGCATaGACCCTTTCCTGTAGAACA +
Preference number: 4 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDLAKGA*TLSCRT
Trigger: TGTTCTACAGGAAAGGGTCCATGCTCCTTTGGCCAA...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACCATCTTAGTATCCTTTaGAAGGGGGAACAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDHLSIL*KGEQQG
Trigger: ACCCTGCTGTTCCCCCTTCCAAAGGATACTAAGATG...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCCATCTTAGTATCCTTTaGAAGGGGGAACAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGHLSIL*KGEQQG
Trigger: ACCCTGCTGTTCCCCCTTCCAAAGGATACTAAGATG...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATCCTCCTACCATGGGCTaGCGACAGCCAACCAGCACT +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYPPTMG*RQPTST
Trigger: AGTGCTGGTTGGCTGTCGCCAGCCCATGGTAGGAGG...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCGTAGCCTCAAAAGGATaGTCGAGGGTTCGCAATCTT +
Preference number: 4 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGVASKG*SRVRNL
Trigger: AAGATTGCGAACCCTCGACCATCCTTTTGAGGCTAC...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
3UTR CAA 72 bp CTGCAGCACACCTGTGCGGTCTGCAATGCCTTTATTTaGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LQHTCAVCNAFI*NPRQLCWMSPS
Trigger: AGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAAATAAAGGCATTGCAGACCGCACAGGTGTGCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGACGGGACGTTTTGGGATaGTTGTCTGTCTGCACAGAG +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRRDVLG*LSVCTE
Trigger: CTCTGTGCAGACAGACAATCATCCCAAAACGTCCCG...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTCTGGCCTTCCTTGACTaGCAGGTGTCTCCATGTCAC +
Preference number: 4 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSLAFLD*QVSPCH
Trigger: GTGACATGGAGACACCTGTCAGTCAAGGAAGGCCAG...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGGCCCTTCTGACCGACTaGAACACCAGTGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVALLTD*NTSVLG
Trigger: GCCAAGAACACTGGTGTTTCAGTCGGTCAGAAGGGC...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGCAGGCCCATACAATGTaGTGCTGGCATTGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWQAHTM*CWHWCS
Trigger: GGAACACCAATGCCAGCATCACATTGTATGGGCCTG...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000612177.4
CDS-3UTR TCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCAAAGGAGACTCTAGCTaGAGTCATCCCACTCAGGCG +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPKGDSS*SHPTQA
Trigger: CGCCTGAGTGGGATGACTTCAGCTAGAGTCTCCTTT...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGGGCAACTTTGCTGGATaGGTCCTTCTCGTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVGNFAG*VLLVPG
Trigger: TCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCC...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAAAAAGGTTTTCCAACTaGGGCAGGGCAGGTCTGCGA +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRKRFSN*GRAGLR
Trigger: TCGCAGACCTGCCCTGCCTCAGTTGGAAAACCTTTT...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGTTTTGCGCCTGCTCATaGTCATCCCTGGAACTGGGA +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWFCACS*SSLELG
Trigger: TCCCAGTTCCAGGGATGATCATGAGCAGGCGCAAAA...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCCATTTTCACTCCCAGTaGGTACCCCAGTTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPHFHSQ*VPQLPW
Trigger: CCAAGGCAACTGGGGTACTCACTGGGAGTGAAAATG...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTCCACTACTGGCACCCTaGACAAATCTAGCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTPLLAP*TNLACR
Trigger: CCTACAGGCTAGATTTGTTCAGGGTGCCAGTAGTGG...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGCCACTACTGGCACCCTaGACAAATCTAGCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWPLLAP*TNLACR
Trigger: CCTACAGGCTAGATTTGTTCAGGGTGCCAGTAGTGG...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTCCACTACTGGCACCCTaGACAAATCTAGCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIPLLAP*TNLACR
Trigger: CCTACAGGCTAGATTTGTTCAGGGTGCCAGTAGTGG...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAAGACAGGGAAGCTCTaGATAATAGGAGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSKTGKL*IIGGEA
Trigger: TGCCTCCCCTCCTATTATTCAGAGCTTCCCTGTCTT...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTGGCACACCCATTGTCTaGCACAGCTATAACGGCACC +
Preference number: 4 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSGTPIV*HSYNGT
Trigger: GGTGCCGTTATAGCTGTGTCAGACAATGGGTGTGCC...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAAGTTTACACCATCAATaGCTGCTCCAGGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRSLHHQ*LLQALP
Trigger: TGGCAGGGCCTGGAGCAGTCATTGATGGTGTAAACT...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541867.5
CDS-3UTR GCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGACCTAGCAGAACCAGATaGCCCCTCCTGCATCCAAAA +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRPSRTR*PLLHPK
Trigger: TTTTGGATGCAGGAGGGGGCATCTGGTTCTGCTAGG...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS-3UTR GCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGACATTGGAGAAGCAGCTaGATCAGAGGAAACTGTGTC +
Preference number: 4 (lower is better)
Translates to: FESQATLLDESFSSQETRHWRSS*IRGNCV
Trigger: GACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATG...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGAAATCCCAGGCAACTTTaGTGGATGAGTCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: FESQATLLDESFSSQETRNPRQL*WMSPSR
Trigger: ACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATT...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGCCTGCAGCACACCTGTaGGGTCTGCAATGCCTTTAT +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWPAAHL*GLQCLY
Trigger: ATAAAGGCATTGCAGACCGCACAGGTGTGCTGCAGG...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCAAAAACAAGCTTGGCTaGAGCCTTAACACGAGCACT +
Preference number: 4 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGKNKLG*SLNTST
Trigger: AGTGCTCGTGTTAAGGCTGCAGCCAAGCTTGTTTTT...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACAAAAACAAGCTTGGCTaGAGCCTTAACACGAGCACT +
Preference number: 4 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDKNKLG*SLNTST
Trigger: AGTGCTCGTGTTAAGGCTGCAGCCAAGCTTGTTTTT...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTGCAGCAGAACAGCCATaGGCAGTGCTCTGCATAAAG +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTAAEQP*AVLCIK
Trigger: CTTTATGCAGAGCACTGCGCATGGCTGTTCTGCTGC...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATACCCAGGTCTCGCATCTaGAACCCCAAGGCGGCAAAA +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIPRSRI*NPKAAK
Trigger: TTTTGCCGCCTTGGGGTTCCAGATGCGAGACCTGGG...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331898.11
ENST00000374778.4
CDS-3UTR CCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACATCATGATGCTGTACTaGGTTGGTGTATTGACCAGG +
Preference number: 4 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDIMMLY*VGVLTR
Trigger: CCTGGTCAATACACCAACCCAGTACAGCATCATGAT...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTACTGGAATTCAGCCATaGGGACTGCAGAGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSITGIQP*GLQRLH
Trigger: GTGAAGCCTCTGCAGTCCCCATGGCTGAATTCCAGT...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAGACAAGCCAGTGCTCTaGAGGCCGAGTTTACACCAT +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRDKPVL*RPSLHH
Trigger: ATGGTGTAAACTCGGCCTCCAGAGCACTGGCTTGTC...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCACGTTTTGTTGTGTGTaGCAGAGGATGTTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGTFCCV*QRMLLG
Trigger: TCCCAACAACATCCTCTGCCACACACAACAAAACGT...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCTCCCACTCAGGCGGGTaGACTCTTCACTTTGCATTG +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPSHSGG*TLHFAL
Trigger: CAATGCAAAGTGAAGAGTCCACCCGCCTGAGTGGGA...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCCTTCCCCAAAGCCATTaGAGAAGCAGCTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSLPQSH*RSSCIR
Trigger: TCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTCTCTTGTTTGTATGCTaGGTCTGCTTTGAACCTGAA +
Preference number: 4 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATLLFVC*VCFEPE
Trigger: TTCAGGTTCAAAGCAGACCCAGCATACAAACAAGAG...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCTTCTCATCCTCTCTGTaGATCAGTCCCTGCAGCACA +
Preference number: 4 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSFSSSL*ISPCST
Trigger: TGTGCTGCAGGGACTGATCCACAGAGAGGATGAGAA...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCGTGTGTGTTTCCCCATaGCAGAGGTCACACTCATGT +
Preference number: 4 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSVCVSP*QRSHSC
Trigger: ACATGAGTGTGACCTCTGCCATGGGGAAACACACAC...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGATCAATGCACCATTCCTaGCACATCAGTTACGGTTCC +
Preference number: 4 (lower is better)
Translates to: FESQATLLDESFSSQETRSMHHS*HISYGS
Trigger: GGAACCGTAACTGATGTGCCAGGAATGGTGCATTGA...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGAGCTCATGATCATCCCTaGAACTGGGAATCAATGCAC +
Preference number: 4 (lower is better)
Translates to: FESQATLLDESFSSQETRAHDHP*NWESMH
Trigger: GTGCATTGATTCCCAGTTCCAGGGATGATCATGAGC...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGATTGGCCAAAGGAGCATaGACCCTTTCCTGTAGAACA +
Preference number: 4 (lower is better)
Translates to: FESQATLLDESFSSQETRLAKGA*TLSCRT
Trigger: TGTTCTACAGGAAAGGGTCCATGCTCCTTTGGCCAA...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTTCTTTCTCCACCCAGTaGTGTGGAGCAACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTSFSTQ*CGATLC
Trigger: GCACAGAGTTGCTCCACACCACTGGGTGGAGAAAGA...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGAACTTGCACTATTAGGTaGACCCGGGACGTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRTCTIR*TRDVLG
Trigger: TCCCAAAACGTCCCGGGTTCACCTAATAGTGCAAGT...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGACTTGCACTATTAGGTaGACCCGGGACGTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWTCTIR*TRDVLG
Trigger: TCCCAAAACGTCCCGGGTTCACCTAATAGTGCAAGT...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTACTTGCACTATTAGGTaGACCCGGGACGTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSITCTIR*TRDVLG
Trigger: TCCCAAAACGTCCCGGGTTCACCTAATAGTGCAAGT...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGCTGGCCTTCCTTGACTaGCAGGTGTCTCCATGTCAC +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGLAFLD*QVSPCH
Trigger: GTGACATGGAGACACCTGTCAGTCAAGGAAGGCCAG...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAAGCCCTGGCCTTCCTTaGCTGACAGGTGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRSPGLP*LTGVSM
Trigger: CATGGAGACACCTGTCAGTCAAGGAAGGCCAGGGCT...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGCCCTTCTGACCGACTaGAACACCAGTGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYALLTD*NTSVLG
Trigger: GCCAAGAACACTGGTGTTTCAGTCGGTCAGAAGGGC...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATACTCAGGATGCCCTTCTaGCCGACTGAAACACCAGTG +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVILRMPF*PTETPV
Trigger: CACTGGTGTTTCAGTCGGTCAGAAGGGCATCCTGAG...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGCTCAGGATGCCCTTCTaGCCGACTGAAACACCAGTG +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGLRMPF*PTETPV
Trigger: CACTGGTGTTTCAGTCGGTCAGAAGGGCATCCTGAG...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTTTTTGGACACACCAATaGATGATTATCCTACACGTG +
Preference number: 4 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATFWTHQ*MIILHV
Trigger: CACGTGTAGGATAATCATTCATTGGTGTGTCCAAAA...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCTCAGGGTGTTTATTGTaGGGCTCAATTTTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGSGCLL*GSIFAQ
Trigger: TTGGGCAAAAATTGAGCCTCACAATAAACACCCTGA...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTTATTTTGTTAACCTGTaGGATCGTTGGCTTTCACAG +
Preference number: 4 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATYFVNL*DRWLSQ
Trigger: CTGTGAAAGCCAACGATCTCACAGGTTAACAAAATA...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTAAAACTTTTCTAGGCTaGTCTGCTTCCCAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATKTFLG*SASQES
Trigger: ACTTTCTTGGGAAGCAGATCAGCCTAGAAAAGTTTT...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGAAACCTGAAGAGCTGGTaGAGTTCTTCCCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRNLKSW*SSSPKP
Trigger: TGGCTTTGGGGAAGAACTTCACCAGCTCTTCAGGTT...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATAGGCAACTTTGCTGGATaGGTCCTTCTCGTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIGNFAG*VLLVPG
Trigger: TCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCC...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGACCAGCCTTGTTGGGTTaGGAGGTTCTGATGATCTTG +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRPALLG*EVLMIL
Trigger: CAAGATCATCAGAACCTCTCAACCCAACAAGGCTGG...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGGCATTTCTCTCCCTCTaGAACGTGGCTGGGATAGGT +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVAFLSL*NVAGIG
Trigger: ACCTATCCCAGCCACGTTTCAGAGGGAGAGAAATGC...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCTGGTGGAAGTGCATATaGACTCTGTTTTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSWWKCI*TLFWEG
Trigger: CCCTTCCCAAAACAGAGTTCATATGCACTTCCACCA...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCTGCAGAAAAAGATTCTaGAACCCAGCCTCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGCRKRF*NPASVL
Trigger: CAAAACTGAGGCTGGGTTTCAGAATCTTTTTCTGCA...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACTTTGTTTGCATGTGGTaGTCATTAGGCGTTCTCATC +
Preference number: 4 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDFVCMW*SLGVLI
Trigger: GATGAGAACGCCTAATGATCACCACATGCAAACAAA...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTCTTCACAGCTCAGGATaGCCTTCTGACCGACTGAAA +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTLHSSG*PSDRLK
Trigger: TTTCAGTCGGTCAGAAGGGCATCCTGAGCTGTGAAG...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGCTTCACAGCTCAGGATaGCCTTCTGACCGACTGAAA +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWLHSSG*PSDRLK
Trigger: TTTCAGTCGGTCAGAAGGGCATCCTGAGCTGTGAAG...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGTTCAGCCATGGGGACTaGAGAGGCTTCACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGFSHGD*RGFTAQ
Trigger: CTGAGCTGTGAAGCCTCTGCAGTCCCCATGGCTGAA...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTTGGAGAAGCAGGCGTTaGTCAGAGGACCTAGGATTT +
Preference number: 4 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIWRSRR*SEDLGF
Trigger: AAATCCTAGGTCCTCTGAGCAACGCCTGCTTCTCCA...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAAGCCCAAGCTGGTTTaGTCTCCGCAGTGTAGATTA +
Preference number: 4 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSKPKLV*SPQCRL
Trigger: TAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGAGTGGACTCTTCACTTTaGATTGCAGAGACAGATGTG +
Preference number: 4 (lower is better)
Translates to: FESQATLLDESFSSQETRVDSSL*IAETDV
Trigger: CACATCTGTCTCTGCAATGCAAAGTGAAGAGTCCAC...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGCCTGCAGCACACCTGTaGGGTCTGCAATGCCTTTAT +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVPAAHL*GLQCLY
Trigger: ATAAAGGCATTGCAGACCGCACAGGTGTGCTGCAGG...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATTCGTGGAGCACAGTTaGAGCAGAACAGCCATGCGC +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIFVEHS*SRTAMR
Trigger: GCGCATGGCTGTTCTGCTGCAACTGTGCTCCACGAA...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGAGATGCTGTACTGGGTTaGTGTATTGACCAGGATGAT +
Preference number: 4 (lower is better)
Translates to: FESQATLLDESFSSQETRDAVLG*CIDQDD
Trigger: ATCATCCTGGTCAATACACCAACCCAGTACAGCATC...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTGAACCCGGGACGTTTTaGGATGATTGTCTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTEPGTF*DDCLSA
Trigger: TGCAGACAGACAATCATCCCAAAACGTCCCGGGTTC...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCTGTCACAGTTGGCTCTaGTCTGCCAATAGCAAGACA +
Preference number: 4 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSCHSWL*SANSKT
Trigger: TGTCTTGCTATTGGCAGACCAGAGCCAACTGTGACA...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTTCTCCATGTCACAGTTaGCTCTGGTCTGCCAATAGC +
Preference number: 4 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGSPCHS*LWSANS
Trigger: GCTATTGGCAGACCAGAGCCAACTGTGACATGGAGA...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGTCTCCATGTCACAGTTaGCTCTGGTCTGCCAATAGC +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWSPCHS*LWSANS
Trigger: GCTATTGGCAGACCAGAGCCAACTGTGACATGGAGA...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTTCTCCATGTCACAGTTaGCTCTGGTCTGCCAATAGC +
Preference number: 4 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSISPCHS*LWSANS
Trigger: GCTATTGGCAGACCAGAGCCAACTGTGACATGGAGA...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGGACAAGCCAGTGCTCTaGAGGCCGAGTTTACACCAT +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVDKPVL*RPSLHH
Trigger: ATGGTGTAAACTCGGCCTCCAGAGCACTGGCTTGTC...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGAACGTTTTGTTGTGTGTaGCAGAGGATGTTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: FESQATLLDESFSSQETRTFCCV*QRMLLG
Trigger: TCCCAACAACATCCTCTGCCACACACAACAAAACGT...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGAAGAGAGGAAGACAGGTaGGTAGATAATTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: FESQATLLDESFSSQETRREEDR*VDNWMV
Trigger: CACCATCCAATTATCTACCCACCTGTCTTCCTCTCT...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACAGTGTCTCCCTTGGGTaGATAGGATACCAGATTTTA +
Preference number: 4 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDSVSLG*IGYQIL
Trigger: TAAAATCTGGTATCCTATCCACCCAAGGGAGACACT...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCCACCCGCCATGTAATTaGCCTCCATCAGCTTTTTAC +
Preference number: 4 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSHPPCN*PPSAFY
Trigger: GTAAAAAGCTGATGGAGGCCAATTACATGGCGGGTG...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATCCCAGGCAACTTTGCTaGATGAGTCCTTCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYPRQLC*MSPSRP
Trigger: GGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGG...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTGTGTGTGTTTCCCCATaGCAGAGGTCACACTCATGT +
Preference number: 4 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIVCVSP*QRSHSC
Trigger: ACATGAGTGTGACCTCTGCCATGGGGAAACACACAC...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATCCCGAATCTGGCTCCTaGCAGCTCACTAGGAAATGC +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYPESGS*QLTRKC
Trigger: GCATTTCCTAGTGAGCTGCCAGGAGCCAGATTCGGG...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCGATCATCCCTGGAACTaGGAATCAATGCACCATTCC +
Preference number: 4 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSDHPWN*ESMHHS
Trigger: GGAATGGTGCATTGATTCCCAGTTCCAGGGATGATC...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGCCTCTGAAACGTGGCTaGGATAGGTACCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGPLKRG*DRYPPE
Trigger: CTCTGGTGGGTACCTATCCCAGCCACGTTTCAGAGG...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCTTTTCTTCTGTTTCGTaGAGCACAGTTGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGFSSVS*STVAAE
Trigger: TTCTGCTGCAACTGTGCTCCACGAAACAGAAGAAAA...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTGTTGCCTGCCCACTTTaGGGTTCTCTGCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTVACPL*GSLLFS
Trigger: TGAGAAAAGCAGAGAACCCCAAAGTGGGCAGGCAAC...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAAGCAAGGTGCGGGGATaGAGGTCACAGATTGCGCTT +
Preference number: 4 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRSKVRG*RSQIAL
Trigger: AAGCGCAATCTGTGACCTTCATCCCCGCACCTTGCT...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS-3UTR TCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGCCACATTTTGGATCATaGTGCTGTACTGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWPHFGS*CCTGLV
Trigger: CACCAACCCAGTACAGCATCATGATCCAAAATGTGG...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTCCACATTTTGGATCATaGTGCTGTACTGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGPHFGS*CCTGLV
Trigger: CACCAACCCAGTACAGCATCATGATCCAAAATGTGG...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATACGGGACGTTTTGGGATaGTTGTCTGTCTGCACAGAG +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIRDVLG*LSVCTE
Trigger: CTCTGTGCAGACAGACAATCATCCCAAAACGTCCCG...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAACCTGGTTTCTTCCTTaGACCACTGGAATTCAGCCA +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRTWFLP*TTGIQP
Trigger: TGGCTGAATTCCAGTGGTTCAAGGAAGAAACCAGGT...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTACCTGGTTTCTTCCTTaGACCACTGGAATTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTTWFLP*TTGIQP
Trigger: TGGCTGAATTCCAGTGGTTCAAGGAAGAAACCAGGT...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATCAGGCCCATACAATGTaGTGCTGGCATTGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYQAHTM*CWHWCS
Trigger: GGAACACCAATGCCAGCATCACATTGTATGGGCCTG...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331898.11
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAAGTTTACACCATCAATaGCTGCTCCAGGCCCATACA +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRSLHHQ*LLQAHT
Trigger: TGTATGGGCCTGGAGCAGTCATTGATGGTGTAAACT...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGTTTACACCATCAATaGCTGCTCCAGGCCCATACA +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWSLHHQ*LLQAHT
Trigger: TGTATGGGCCTGGAGCAGTCATTGATGGTGTAAACT...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000612177.4
CDS-3UTR TCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACCTTAGAAGAGCTTCCTaGAACAAATACCAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDLRRAS*NKYQSC
Trigger: ACAACTCTGGTATTTGTTTCAGGAAGCTCTTCTAAG...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGAAAAGGTTTTCCAACTaGGGCAGGGCAGGTCTGCGA +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGKRFSN*GRAGLR
Trigger: TCGCAGACCTGCCCTGCCTCAGTTGGAAAACCTTTT...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCTTTAGACTGAGGGCCTaGAAAGGTTTTCCAACTGAG +
Preference number: 4 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSFRLRA*KGFPTE
Trigger: CTCAGTTGGAAAACCTTTTCAGGCCCTCAGTCTAAA...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTGAACAAGTCTTGGAGTaGGGAATAGGTCCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGEQVLE*GIGPAC
Trigger: ACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTC...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATCATTTTCACTCCCAGTaGGTACCCCAGTTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYHFHSQ*VPQLPW
Trigger: CCAAGGCAACTGGGGTACTCACTGGGAGTGAAAATG...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTCTTCAAAATGATGGGTaGCAGCCACTCTCCCATGAA +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTLQNDG*QPLSHE
Trigger: TTCATGGGAGAGTGGCTGTCACCCATCATTTTGAAG...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGACTGGGGCCTCTTTGTaGCACAACACCTTACCTTTT +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWTGASL*HNTLPF
Trigger: AAAAGGTAAGGTGTTGTGTCACAAAGAGGCCCCAGT...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTATAAATAGAACTTGCTaGCTTCTCTTTGTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATINRTC*LLFVEG
Trigger: GCCTTCAACAAAGAGAAGTCAGCAAGTTCTATTTAT...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCAAGCCCAAGCTGGTTTaGTCTCCGCAGTGTAGATTA +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPKPKLV*SPQCRL
Trigger: TAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTAGTCAGTTGCTCAAGTaGCCTCAGCTTAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSISQLLK*PQLRRA
Trigger: AGCTCTTCTAAGCTGAGGGCACTTGAGCAACTGACT...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGAAGTCAGTTGCTCAAGTaGCCTCAGCTTAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRSQLLK*PQLRRA
Trigger: AGCTCTTCTAAGCTGAGGGCACTTGAGCAACTGACT...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCAATCCCAGGCAACTTTaGTGGATGAGTCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPNPRQL*WMSPSR
Trigger: ACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATT...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGAAATCCCAGGCAACTTTaGTGGATGAGTCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRNPRQL*WMSPSR
Trigger: ACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATT...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATACCTGCAGCACACCTGTaGGGTCTGCAATGCCTTTAT +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIPAAHL*GLQCLY
Trigger: ATAAAGGCATTGCAGACCGCACAGGTGTGCTGCAGG...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCGGAACTGGGAATCAATaGACCATTCCTGGCACATCA +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPGTGNQ*TIPGTS
Trigger: TGATGTGCCAGGAATGGTGCATTGATTCCCAGTTCC...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTTGCAAGAGATGTACTTaGTCAGACTTGTATGTTTTG +
Preference number: 4 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATCKRCT*SDLYVL
Trigger: CAAAACATACAAGTCTGAGCAAGTACATCTCTTGCA...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTCCATGCGCAGTGCTCTaGATAAAGCCTGTACATGTT +
Preference number: 4 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGPCAVL*IKPVHV
Trigger: AACATGTACAGGCTTTATGCAGAGCACTGCGCATGG...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCGCAGCAGAACAGCCATaGGCAGTGCTCTGCATAAAG +
Preference number: 4 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCAAEQP*AVLCIK
Trigger: CTTTATGCAGAGCACTGCGCATGGCTGTTCTGCTGC...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCATTAGATCACACACATaGACAGATGTACGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSIRSHT*TDVRVP
Trigger: GGGGACACGTACATCTGTCCATGTGTGTGATCTAAT...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS-3UTR CCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGGAACCCGGGACGTTTTaGGATGATTGTCTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVEPGTF*DDCLSA
Trigger: TGCAGACAGACAATCATCCCAAAACGTCCCGGGTTC...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTGAACCCGGGACGTTTTaGGATGATTGTCTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSEPGTF*DDCLSA
Trigger: TGCAGACAGACAATCATCCCAAAACGTCCCGGGTTC...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGATGTCACAGTTGGCTCTaGTCTGCCAATAGCAAGACA +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRCHSWL*SANSKT
Trigger: TGTCTTGCTATTGGCAGACCAGAGCCAACTGTGACA...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGATGTCACAGTTGGCTCTaGTCTGCCAATAGCAAGACA +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRCHSWL*SANSKT
Trigger: TGTCTTGCTATTGGCAGACCAGAGCCAACTGTGACA...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATAACTGGAATTCAGCCATaGGGACTGCAGAGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVITGIQP*GLQRLH
Trigger: GTGAAGCCTCTGCAGTCCCCATGGCTGAATTCCAGT...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTTCTTCCTTGAACCACTaGAATTCAGCCATGGGGACT +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTSSLNH*NSAMGT
Trigger: AGTCCCCATGGCTGAATTCCAGTGGTTCAAGGAAGA...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGATTCCATCCAGACCAGTaGCTAACCTGGTTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRFHPDQ*LTWFLP
Trigger: AGGAAGAAACCAGGTTAGCCACTGGTCTGGATGGAA...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGTTCCATCCAGACCAGTaGCTAACCTGGTTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWFHPDQ*LTWFLP
Trigger: AGGAAGAAACCAGGTTAGCCACTGGTCTGGATGGAA...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTTTCCATCCAGACCAGTaGCTAACCTGGTTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIFHPDQ*LTWFLP
Trigger: AGGAAGAAACCAGGTTAGCCACTGGTCTGGATGGAA...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCTTCCATCCAGACCAGTaGCTAACCTGGTTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPFHPDQ*LTWFLP
Trigger: AGGAAGAAACCAGGTTAGCCACTGGTCTGGATGGAA...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGATCCCAAGCTTGTTCGTaGCCACACAAGTATAGTTCC +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRSQACS*PHKYSS
Trigger: GGAACTATACTTGTGTGGCCACGAACAAGCTTGGGA...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATAGACAAGCCAGTGCTCTaGAGGCCGAGTTTACACCAT +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIDKPVL*RPSLHH
Trigger: ATGGTGTAAACTCGGCCTCCAGAGCACTGGCTTGTC...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAAAAGAAGCCCAAGCTaGTTTGCTCTCCGCAGTGTA +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWKRSPS*FALRSV
Trigger: TACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTT...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATTCCCACTCAGGCGGGTaGACTCTTCACTTTGCATTG +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYSHSGG*TLHFAL
Trigger: CAATGCAAAGTGAAGAGTCCACCCGCCTGAGTGGGA...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACAGATTAAACCAGAACTaGAGCAGAAAGGAGACTCTA +
Preference number: 4 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDRLNQN*SRKETL
Trigger: TAGAGTCTCCTTTCTGCTCCAGTTCTGGTTTAATCT...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTCACCCGCCATGTAATTaGCCTCCATCAGCTTTTTAC +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTHPPCN*PPSAFY
Trigger: GTAAAAAGCTGATGGAGGCCAATTACATGGCGGGTG...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGAGATCATCCCTGGAACTaGGAATCAATGCACCATTCC +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRDHPWN*ESMHHS
Trigger: GGAATGGTGCATTGATTCCCAGTTCCAGGGATGATC...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTTTGGCCAAAGGAGCATaGACCCTTTCCTGTAGAACA +
Preference number: 4 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSILAKGA*TLSCRT
Trigger: TGTTCTACAGGAAAGGGTCCATGCTCCTTTGGCCAA...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACCTCTGAAACGTGGCTaGGATAGGTACCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRPLKRG*DRYPPE
Trigger: CTCTGGTGGGTACCTATCCCAGCCACGTTTCAGAGG...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCCACTCCACATTTCTTTaGACTCTAAGTATTCTGCAC +
Preference number: 4 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGHSTFL*TLSILH
Trigger: GTGCAGAATACTTAGAGTCCAAAGAAATGTGGAGTG...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATTCTTTCTCCACCCAGTaGTGTGGAGCAACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYSFSTQ*CGATLC
Trigger: GCACAGAGTTGCTCCACACCACTGGGTGGAGAAAGA...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGTCTTTCTCCACCCAGTaGTGTGGAGCAACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGSFSTQ*CGATLC
Trigger: GCACAGAGTTGCTCCACACCACTGGGTGGAGAAAGA...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
3UTR CAA 72 bp GGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTaGGGAAGGGGAAGGGTTTCAGAGTCCCTACATTGC +
Preference number: 4 (lower is better)
Translates to: GITLVEVHMNSV*GRGRVSESLHC
Trigger: GCAATGTAGGGACTCTGAAACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGCCACATTTTGGATCATaGTGCTGTACTGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVPHFGS*CCTGLV
Trigger: CACCAACCCAGTACAGCATCATGATCCAAAATGTGG...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGCTGAGGAGATATTCATaGTCTGAGGAGGAACTTGCA +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWLRRYS*SEEELA
Trigger: TGCAAGTTCCTCCTCAGATCATGAATATCTCCTCAG...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTCTGAGGAGATATTCATaGTCTGAGGAGGAACTTGCA +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTLRRYS*SEEELA
Trigger: TGCAAGTTCCTCCTCAGATCATGAATATCTCCTCAG...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGAACTTTCTTGAAGGGTTaGGAGAAGCATAAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRTFLKG*EKHKGW
Trigger: CCAGCCTTTATGCTTCTCTCAACCCTTCAAGAAAGT...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGGAACAAGTCTTGGAGTaGGGAATAGGTCCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVEQVLE*GIGPAC
Trigger: ACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTC...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATCCAGCCTTGTTGGGTTaGGAGGTTCTGATGATCTTG +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYPALLG*EVLMIL
Trigger: CAAGATCATCAGAACCTCTCAACCCAACAAGGCTGG...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACGAAATATGTCTGTTGTaGAGAAGTCATTTTCACTCC +
Preference number: 4 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDEICLL*RSHFHS
Trigger: GGAGTGAAAATGACTTCTTCACAACAGACATATTTC...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGCTTCAAAATGATGGGTaGCAGCCACTCTCCCATGAA +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVLQNDG*QPLSHE
Trigger: TTCATGGGAGAGTGGCTGTCACCCATCATTTTGAAG...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTCTTCAAAATGATGGGTaGCAGCCACTCTCCCATGAA +
Preference number: 4 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSLQNDG*QPLSHE
Trigger: TTCATGGGAGAGTGGCTGTCACCCATCATTTTGAAG...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGACTATATGCTTCAAAATaGTGGGTGACAGCCACTCTC +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRLYASK*WVTATL
Trigger: GAGAGTGGCTGTCACCCATCATTTTGAAGCATATAG...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTTGGTGGAAGTGCATATaGACTCTGTTTTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSWWKCI*TLFWEG
Trigger: CCCTTCCCAAAACAGAGTTCATATGCACTTCCACCA...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTACATCTCCCCCTCCCTaGATTAAAGCAAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTTSPPP*IKARMR
Trigger: TCTCATTCTTGCTTTAATTCAGGGAGGGGGAGATGT...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAACATCTCCCCCTCCCTaGATTAAAGCAAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRTSPPP*IKARMR
Trigger: TCTCATTCTTGCTTTAATTCAGGGAGGGGGAGATGT...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTACATCTCCCCCTCCCTaGATTAAAGCAAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGTSPPP*IKARMR
Trigger: TCTCATTCTTGCTTTAATTCAGGGAGGGGGAGATGT...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGACTGGGGCCTCTTTGTaGCACAACACCTTACCTTTT +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVTGASL*HNTLPF
Trigger: AAAAGGTAAGGTGTTGTGTCACAAAGAGGCCCCAGT...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCCAGCCAACCAGCACTTaGAAATTCAATGTACAGCCA +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPQPTST*KFNVQP
Trigger: TGGCTGTACATTGAATTTTCAAGTGCTGGTTGGCTG...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGACAGCCAACCAGCACTTaGAAATTCAATGTACAGCCA +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRQPTST*KFNVQP
Trigger: TGGCTGTACATTGAATTTTCAAGTGCTGGTTGGCTG...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATAAGACAGGGAAGCTCTaGATAATAGGAGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYKTGKL*IIGGEA
Trigger: TGCCTCCCCTCCTATTATTCAGAGCTTCCCTGTCTT...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCCTACTTACACACCTGTaGAGTTTTACTCAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSLLTHL*SFTQVL
Trigger: GAGCACTTGAGTAAAACTTCACAGGTGTGTAAGTAG...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTCCTCACAACTGCACTTaGCATGTCACGAAAATTTCC +
Preference number: 4 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIPHNCT*HVTKIS
Trigger: GGAAATTTTCGTGACATGTCAAGTGCAGTTGTGAGG...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGACCTCACAACTGCACTTaGCATGTCACGAAAATTTCC +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRPHNCT*HVTKIS
Trigger: GGAAATTTTCGTGACATGTCAAGTGCAGTTGTGAGG...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCCAGTTGGGCACGTTCTaGAGAGCTCTGGCATCAAAA +
Preference number: 4 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCQLGTF*RALASK
Trigger: TTTTGATGCCAGAGCTCTGCAGAACGTGCCCAACTG...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS-3UTR GCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATCCAGATGCCCCCTCCTaGATCCAAAAAGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYPDAPS*IQKELS
Trigger: AGAAAGCTCTTTTTGGATGCAGGAGGGGGCATCTGG...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS-3UTR GCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGCTTCACAGCTCAGGATaGCCTTCTGACCGACTGAAA +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGLHSSG*PSDRLK
Trigger: TTTCAGTCGGTCAGAAGGGCATCCTGAGCTGTGAAG...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCAAGTCAGAGTGGACATaGGGCCTTTGTTTTCAATCC +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPKSEWT*GLCFQS
Trigger: GGATTGAAAACAAAGGCCGCATGTCCACTCTGACTT...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTAAGTCAGAGTGGACATaGGGCCTTTGTTTTCAATCC +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTKSEWT*GLCFQS
Trigger: GGATTGAAAACAAAGGCCGCATGTCCACTCTGACTT...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTTACACCATCAATGACTaGTCCAGGCCCATACAATGT +
Preference number: 4 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIYTIND*SRPIQC
Trigger: ACATTGTATGGGCCTGGAGCAGTCATTGATGGTGTA...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331898.11
ENST00000612177.4
CDS-3UTR GCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGATACACCATCAATGACTaGTCCAGGCCCATACAATGT +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRYTIND*SRPIQC
Trigger: ACATTGTATGGGCCTGGAGCAGTCATTGATGGTGTA...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000612177.4
CDS-3UTR GCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTTACACCATCAATGACTaGTCCAGGCCCATACAATGT +
Preference number: 4 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGYTIND*SRPIQC
Trigger: ACATTGTATGGGCCTGGAGCAGTCATTGATGGTGTA...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331898.11
ENST00000612177.4
CDS-3UTR GCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTGGAGAAGCAGGCGTTaGTCAGAGGACCTAGGATTT +
Preference number: 4 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCWRSRR*SEDLGF
Trigger: AAATCCTAGGTCCTCTGAGCAACGCCTGCTTCTCCA...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACGTGAGGCTCAATTTTTaGCCAAATGAAACTTACGTT +
Preference number: 4 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDVRLNF*PNETYV
Trigger: AACGTAAGTTTCATTTGGGCAAAAATTGAGCCTCAC...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACTTTTCTAGGCTGATCTaGTTCCCAAGAAAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDFSRLI*FPRKCF
Trigger: AAAACACTTTCTTGGGAAGCAGATCAGCCTAGAAAA...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGAGTCAGTTGCTCAAGTaGCCTCAGCTTAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVSQLLK*PQLRRA
Trigger: AGCTCTTCTAAGCTGAGGGCACTTGAGCAACTGACT...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTCATTGGAGAAGCAGCTaGATCAGAGGAAACTGTGTC +
Preference number: 4 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSHWRSS*IRGNCV
Trigger: GACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATG...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGCATTGGAGAAGCAGCTaGATCAGAGGAAACTGTGTC +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVHWRSS*IRGNCV
Trigger: GACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATG...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCTTTGTATGCTGGGTCTaGTTTGAACCTGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPFVCWV*FEPEEL
Trigger: CAGCTCTTCAGGTTCAAAGCAGACCCAGCATACAAA...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGCAGCTCTTGTTTGTATaGTGGGTCTGCTTTGAACCT +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWQLLFV*WVCFEP
Trigger: AGGTTCAAAGCAGACCCAGCATACAAACAAGAGCTG...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTCTGTGCGGTCTGCAATaGCTTTATTTTGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGLCGLQ*LYFESQ
Trigger: CTGGGATTCAAAATAAAGGCATTGCAGACCGCACAG...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGACTGTGCGGTCTGCAATaGCTTTATTTTGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRLCGLQ*LYFESQ
Trigger: CTGGGATTCAAAATAAAGGCATTGCAGACCGCACAG...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTCTGTGGATCAGTCCCTaGAGCACACCTGTGCGGTCT +
Preference number: 4 (lower is better)
Translates to: IIGHLDVALAVHYVISQVLWISP*STPVRS
Trigger: AGACCGCACAGGTGTGCTGCAGGGACTGATCCACAG...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGATACCTCTTAAGACAGTaGTTAGCATTTAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: FESQATLLDESFSSQETRYLLRQ*LAFSVP
Trigger: TGGCACACTAAATGCTAAGCACTGTCTTAAGAGGTA...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCAAAAACAAGCTTGGCTaGAGCCTTAACACGAGCACT +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPKNKLG*SLNTST
Trigger: AGTGCTCGTGTTAAGGCTGCAGCCAAGCTTGTTTTT...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGCCATGCGCAGTGCTCTaGATAAAGCCTGTACATGTT +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVPCAVL*IKPVHV
Trigger: AACATGTACAGGCTTTATGCAGAGCACTGCGCATGG...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTACTTTAAGATTCAGTTaGGCACGTTCTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGTLRFS*ARSAEL
Trigger: GAGCTCTGCAGAACGTGCCCAACTGAATCTTAAAGT...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS-3UTR CCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGGATGCTGTACTGGGTTaGTGTATTGACCAGGATGAT +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWDAVLG*CIDQDD
Trigger: ATCATCCTGGTCAATACACCAACCCAGTACAGCATC...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGATCATGATGCTGTACTaGGTTGGTGTATTGACCAGG +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWIMMLY*VGVLTR
Trigger: CCTGGTCAATACACCAACCCAGTACAGCATCATGAT...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTATCATGATGCTGTACTaGGTTGGTGTATTGACCAGG +
Preference number: 4 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGIMMLY*VGVLTR
Trigger: CCTGGTCAATACACCAACCCAGTACAGCATCATGAT...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGTGTCACAGTTGGCTCTaGTCTGCCAATAGCAAGACA +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVCHSWL*SANSKT
Trigger: TGTCTTGCTATTGGCAGACCAGAGCCAACTGTGACA...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATCACTTACAAAGCCCTaGCCTTCCTTGACTGACAGG +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVISLTKP*PSLTDR
Trigger: CCTGTCAGTCAAGGAAGGCCAGGGCTTTGTAAGTGA...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGTCACTTACAAAGCCCTaGCCTTCCTTGACTGACAGG +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGSLTKP*PSLTDR
Trigger: CCTGTCAGTCAAGGAAGGCCAGGGCTTTGTAAGTGA...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGTCCCAAGCTTGTTCGTaGCCACACAAGTATAGTTCC +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVSQACS*PHKYSS
Trigger: GGAACTATACTTGTGTGGCCACGAACAAGCTTGGGA...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTAACTTGATGAAGAAGTaGGCTAAGAGGGTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSINLMKK*AKRVPD
Trigger: ATCAGGGACCCTCTTAGCCCACTTCTTCATCAAGTT...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGAAAAGAAGCCCAAGCTaGTTTGCTCTCCGCAGTGTA +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVKRSPS*FALRSV
Trigger: TACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTT...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGAAGAGAGGAAGACAGGTaGGTAGATAATTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRREEDR*VDNWMV
Trigger: CACCATCCAATTATCTACCCACCTGTCTTCCTCTCT...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGGCTCATGATCATCCCTaGAACTGGGAATCAATGCAC +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVAHDHP*NWESMH
Trigger: GTGCATTGATTCCCAGTTCCAGGGATGATCATGAGC...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGCATCTTAGTATCCTTTaGAAGGGGGAACAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVHLSIL*KGEQQG
Trigger: ACCCTGCTGTTCCCCCTTCCAAAGGATACTAAGATG...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGGTTGCCTGCCCACTTTaGGGTTCTCTGCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGVACPL*GSLLFS
Trigger: TGAGAAAAGCAGAGAACCCCAAAGTGGGCAGGCAAC...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTGTAGCCTCAAAAGGATaGTCGAGGGTTCGCAATCTT +
Preference number: 4 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSVASKG*SRVRNL
Trigger: AAGATTGCGAACCCTCGACCATCCTTTTGAGGCTAC...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGGAAGGCAAGTGTCTCTaGCATACAGGAGCTGTCATA +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGEGKCL*HTGAVI
Trigger: TATGACAGCTCCTGTATGTCAGAGACACTTGCCTTC...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS-3UTR TCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATAACCTGGTTTCTTCCTTaGACCACTGGAATTCAGCCA +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVITWFLP*TTGIQP
Trigger: TGGCTGAATTCCAGTGGTTCAAGGAAGAAACCAGGT...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCAGTTTACACCATCAATaGCTGCTCCAGGCCCATACA +
Preference number: 4 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCSLHHQ*LLQAHT
Trigger: TGTATGGGCCTGGAGCAGTCATTGATGGTGTAAACT...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331898.11
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGATCAGGGTGTTTATTGTaGGGCTCAATTTTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRSGCLL*GSIFAQ
Trigger: TTGGGCAAAAATTGAGCCTCACAATAAACACCCTGA...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCCTGATGGTGTATAAATaGATACAGTGGGAGAGATAC +
Preference number: 4 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSLMVYK*IQWERY
Trigger: GTATCTCTCCCACTGTATTCATTTATACACCATCAG...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTTCTGGGAATAGTGAGTaGCTGATCATTAGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSISGNSE*LIISLL
Trigger: TAGCAAGCTAATGATCAGTCACTCACTATTCCCAGA...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTTCTGGGAATAGTGAGTaGCTGATCATTAGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTSGNSE*LIISLL
Trigger: TAGCAAGCTAATGATCAGTCACTCACTATTCCCAGA...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGACTTTCTTGAAGGGTTaGGAGAAGCATAAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVTFLKG*EKHKGW
Trigger: CCAGCCTTTATGCTTCTCTCAACCCTTCAAGAAAGT...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAAACCTGAAGAGCTGGTaGAGTTCTTCCCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRNLKSW*SSSPKP
Trigger: TGGCTTTGGGGAAGAACTTCACCAGCTCTTCAGGTT...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGTTTAGACTGAGGGCCTaGAAAGGTTTTCCAACTGAG +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVFRLRA*KGFPTE
Trigger: CTCAGTTGGAAAACCTTTTCAGGCCCTCAGTCTAAA...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGCACACTCATGTGCCTTaGTGGACAAAAACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVHTHVP*WTKTKR
Trigger: CCTCTTTGTTTTTGTCCATCAAGGCACATGAGTGTG...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTTTTACCCCAGACAGATaGGGATCAACTGTAGCATTT +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTFTPDR*GSTVAF
Trigger: AAATGCTACAGTTGATCCTCATCTGTCTGGGGTAAA...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGAGAAATATGTCTGTTGTaGAGAAGTCATTTTCACTCC +
Preference number: 4 (lower is better)
Translates to: FESQATLLDESFSSQETREICLL*RSHFHS
Trigger: GGAGTGAAAATGACTTCTTCACAACAGACATATTTC...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTCTATATGCTTCAAAATaGTGGGTGACAGCCACTCTC +
Preference number: 4 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSLYASK*WVTATL
Trigger: GAGAGTGGCTGTCACCCATCATTTTGAAGCATATAG...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATTGGTGGAAGTGCATATaGACTCTGTTTTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYWWKCI*TLFWEG
Trigger: CCCTTCCCAAAACAGAGTTCATATGCACTTCCACCA...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATACTGGGGCCTCTTTGTaGCACAACACCTTACCTTTT +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYTGASL*HNTLPF
Trigger: AAAAGGTAAGGTGTTGTGTCACAAAGAGGCCCCAGT...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTTTCTCACCCAGGTTTTaGGAACAAACTGCCCAATCT +
Preference number: 4 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSFSPRF*EQTAQS
Trigger: AGATTGGGCAGTTTGTTCTCAAAACCTGGGTGAGAA...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTTGCAGAAAAAGATTCTaGAACCCAGCCTCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSICRKRF*NPASVL
Trigger: CAAAACTGAGGCTGGGTTTCAGAATCTTTTTCTGCA...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGAATAAATAGAACTTGCTaGCTTCTCTTTGTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: FESQATLLDESFSSQETRINRTC*LLFVEG
Trigger: GCCTTCAACAAAGAGAAGTCAGCAAGTTCTATTTAT...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTATGTACAGCCACTCCTaGTGCCGCCACAGGGATAAG +
Preference number: 4 (lower is better)
Translates to: IIGHLDVALAVHYVISQVMYSHS*CRHRDK
Trigger: CTTATCCCTGTGGCGGCATCAGGAGTGGCTGTACAT...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAAAGACAGGGAAGCTCTaGATAATAGGAGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRKTGKL*IIGGEA
Trigger: TGCCTCCCCTCCTATTATTCAGAGCTTCCCTGTCTT...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTCTACTTACACACCTGTaGAGTTTTACTCAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGLLTHL*SFTQVL
Trigger: GAGCACTTGAGTAAAACTTCACAGGTGTGTAAGTAG...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTCACAGCTCAGGATaGCCTTCTGACCGACTGAAA +
Preference number: 4 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRLHSSG*PSDRLK
Trigger: TTTCAGTCGGTCAGAAGGGCATCCTGAGCTGTGAAG...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGAAGTCAGAGTGGACATaGGGCCTTTGTTTTCAATCC +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVKSEWT*GLCFQS
Trigger: GGATTGAAAACAAAGGCCGCATGTCCACTCTGACTT...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTCCAGAGACAAGCCAGTaGTCTGGAGGCCGAGTTTAC +
Preference number: 4 (lower is better)
Translates to: IIGHLDVALAVHYVISQVPETSQ*SGGRVY
Trigger: GTAAACTCGGCCTCCAGAGCACTGGCTTGTCTCTGG...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATAAAGCCCAAGCTGGTTTaGTCTCCGCAGTGTAGATTA +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIKPKLV*SPQCRL
Trigger: TAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGGTGGACTCTTCACTTTaGATTGCAGAGACAGATGTG +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVVDSSL*IAETDV
Trigger: CACATCTGTCTCTGCAATGCAAAGTGAAGAGTCCAC...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGCAGCTCTTGTTTGTATaGTGGGTCTGCTTTGAACCT +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVQLLFV*WVCFEP
Trigger: AGGTTCAAAGCAGACCCAGCATACAAACAAGAGCTG...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTCTGTGCGGTCTGCAATaGCTTTATTTTGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSLCGLQ*LYFESQ
Trigger: CTGGGATTCAAAATAAAGGCATTGCAGACCGCACAG...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGACACACCTGTGCGGTCTaGAATGCCTTTATTTTGAAT +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRHTCAV*NAFILN
Trigger: ATTCAAAATAAAGGCATTGCAGACCGCACAGGTGTG...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTGAGGTCACACTCATGTaGCTTGATGGACAAAAACAA +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTEVTLM*LDGQKQ
Trigger: TTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTC...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGAGAGGTCACACTCATGTaGCTTGATGGACAAAAACAA +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQREVTLM*LDGQKQ
Trigger: TTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTC...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGGAACTGGGAATCAATaGACCATTCCTGGCACATCA +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYGTGNQ*TIPGTS
Trigger: TGATGTGCCAGGAATGGTGCATTGATTCCCAGTTCC...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGTGAGTACCCCAGTTaGCTTGGGTTGTATTTACTT +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWSEYPS*LGLYLL
Trigger: AAGTAAATACAACCCAAGGCAACTGGGGTACTCACT...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATACCATGCGCAGTGCTCTaGATAAAGCCTGTACATGTT +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIPCAVL*IKPVHV
Trigger: AACATGTACAGGCTTTATGCAGAGCACTGCGCATGG...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCCACTTTGGGGTTCTCTaGTTTTCTCATGGAATAGTT +
Preference number: 4 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSHFGVL*FSHGIV
Trigger: AACTATTCCATGAGAAAAGCAGAGAACCCCAAAGTG...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGGGAATTGAGGAAAGATaGCCCACCACCAGATCTTAC +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGGIEER*PTTRSY
Trigger: GTAAGATCTGGTGGTGGGGCATCTTTCCTCAATTCC...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAGAACCCGGGACGTTTTaGGATGATTGTCTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LIWLPFHVENLQEMYLLREPGTF*DDCLSA
Trigger: TGCAGACAGACAATCATCCCAAAACGTCCCGGGTTC...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATCTTCCTTGAACCACTaGAATTCAGCCATGGGGACT +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVISSLNH*NSAMGT
Trigger: AGTCCCCATGGCTGAATTCCAGTGGTTCAAGGAAGA...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATTCTTCCTTGAACCACTaGAATTCAGCCATGGGGACT +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYSSLNH*NSAMGT
Trigger: AGTCCCCATGGCTGAATTCCAGTGGTTCAAGGAAGA...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGTCCCAAGCTTGTTCGTaGCCACACAAGTATAGTTCC +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGSQACS*PHKYSS
Trigger: GGAACTATACTTGTGTGGCCACGAACAAGCTTGGGA...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGAACTTGATGAAGAAGTaGGCTAAGAGGGTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVNLMKK*AKRVPD
Trigger: ATCAGGGACCCTCTTAGCCCACTTCTTCATCAAGTT...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAAGTGTCTCCCTTGGGTaGATAGGATACCAGATTTTA +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRSVSLG*IGYQIL
Trigger: TAAAATCTGGTATCCTATCCACCCAAGGGAGACACT...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGGAGAAGCATAAAGGCTaGCACCTTTGTCCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVEKHKG*HLCPSS
Trigger: ACTTGAAGGACAAAGGTGCCAGCCTTTATGCTTCTC...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTCTCTTGTTTGTATGCTaGGTCTGCTTTGAACCTGAA +
Preference number: 4 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGLLFVC*VCFEPE
Trigger: TTCAGGTTCAAAGCAGACCCAGCATACAAACAAGAG...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAACAAGACAGCAAAGGTaGCTCAGCTCTTGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRTRQQR*LSSCLY
Trigger: ATACAAACAAGAGCTGAGCCACCTTTGCTGTCTTGT...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAGTGTGTGTTTCCCCATaGCAGAGGTCACACTCATGT +
Preference number: 4 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRVCVSP*QRSHSC
Trigger: ACATGAGTGTGACCTCTGCCATGGGGAAACACACAC...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGAGTACCCCAGTTGCCTTaGGTTGTATTTACTTTGTTG +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRVPQLP*VVFTLL
Trigger: CAACAAAGTAAATACAACCCAAGGCAACTGGGGTAC...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCGTACCCCAGTTGCCTTaGGTTGTATTTACTTTGTTG +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPVPQLP*VVFTLL
Trigger: CAACAAAGTAAATACAACCCAAGGCAACTGGGGTAC...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGATTTTCTTCTGTTTCGTaGAGCACAGTTGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRFSSVS*STVAAE
Trigger: TTCTGCTGCAACTGTGCTCCACGAAACAGAAGAAAA...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCTTAAAGAGGGCACCATaGAAAGAAACAAAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGLKRAP*KETKRN
Trigger: ATTCCTTTTTGTTTCTTTCCATGGTGCCCTCTTTAA...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCGTAGCCTCAAAAGGATaGTCGAGGGTTCGCAATCTT +
Preference number: 4 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCVASKG*SRVRNL
Trigger: AAGATTGCGAACCCTCGACCATCCTTTTGAGGCTAC...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTGAGATATTCATGATCTaGGGAGGAACTTGCACTATT +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTEIFMI*GGTCTI
Trigger: AATAGTGCAAGTTCCTCCTCAGATCATGAATATCTC...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGTGTTCTTGGCTTTTaGGATATAGGGAGGATAGTT +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWSVLGF*DIGRIV
Trigger: AACTATCCTCCCTATATCTCAAAAGCCAAGAACACT...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGCCTTTTCTGAAACATTaGAGAAAGTCAGAGTGGACA +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWPFLKH*RKSEWT
Trigger: TGTCCACTCTGACTTTCTTCAATGTTTCAGAAAAGG...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGACCTTTTCTGAAACATTaGAGAAAGTCAGAGTGGACA +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRPFLKH*RKSEWT
Trigger: TGTCCACTCTGACTTTCTTCAATGTTTCAGAAAAGG...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGATTTTGGACACACCAATaGATGATTATCCTACACGTG +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRFWTHQ*MIILHV
Trigger: CACGTGTAGGATAATCATTCATTGGTGTGTCCAAAA...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGTCAGGGTGTTTATTGTaGGGCTCAATTTTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVSGCLL*GSIFAQ
Trigger: TTGGGCAAAAATTGAGCCTCACAATAAACACCCTGA...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGACTGATGGTGTATAAATaGATACAGTGGGAGAGATAC +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRLMVYK*IQWERY
Trigger: GTATCTCTCCCACTGTATTCATTTATACACCATCAG...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTCTGATGGTGTATAAATaGATACAGTGGGAGAGATAC +
Preference number: 4 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSILMVYK*IQWERY
Trigger: GTATCTCTCCCACTGTATTCATTTATACACCATCAG...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTGATGCCAATGTCTGCTaGTGGTGTATAAATGAATAC +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTDANVC*WCINEY
Trigger: GTATTCATTTATACACCATCAGCAGACATTGGCATC...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTTATTTTGTTAACCTGTaGGATCGTTGGCTTTCACAG +
Preference number: 4 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIYFVNL*DRWLSQ
Trigger: CTGTGAAAGCCAACGATCTCACAGGTTAACAAAATA...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGGGAATAGTGAGTGACTaGTCATTAGCTTGCTACTTT +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWGIVSD*SLACYF
Trigger: AAAGTAGCAAGCTAATGATCAGTCACTCACTATTCC...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTGGAATAGTGAGTGACTaGTCATTAGCTTGCTACTTT +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTGIVSD*SLACYF
Trigger: AAAGTAGCAAGCTAATGATCAGTCACTCACTATTCC...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAGGAATAGTGAGTGACTaGTCATTAGCTTGCTACTTT +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRGIVSD*SLACYF
Trigger: AAAGTAGCAAGCTAATGATCAGTCACTCACTATTCC...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGTCTGGGAATAGTGAGTaGCTGATCATTAGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVSGNSE*LIISLL
Trigger: TAGCAAGCTAATGATCAGTCACTCACTATTCCCAGA...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAAAACTTTTCTAGGCTaGTCTGCTTCCCAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWKTFLG*SASQES
Trigger: ACTTTCTTGGGAAGCAGATCAGCCTAGAAAAGTTTT...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATACTTTCTTGAAGGGTTaGGAGAAGCATAAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYTFLKG*EKHKGW
Trigger: CCAGCCTTTATGCTTCTCTCAACCCTTCAAGAAAGT...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCCTTAGAAGAGCTTCCTaGAACAAATACCAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPLRRAS*NKYQSC
Trigger: ACAACTCTGGTATTTGTTTCAGGAAGCTCTTCTAAG...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGAGGAAACTGTGTCACTaGCACTTTCTCCCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGRKLCH*HFLPSV
Trigger: AACAGAAGGGAGAAAGTGTCAGTGACACAGTTTCCT...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATAAGGAAACTGTGTCACTaGCACTTTCTCCCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIRKLCH*HFLPSV
Trigger: AACAGAAGGGAGAAAGTGTCAGTGACACAGTTTCCT...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCAGGAAACTGTGTCACTaGCACTTTCTCCCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCRKLCH*HFLPSV
Trigger: AACAGAAGGGAGAAAGTGTCAGTGACACAGTTTCCT...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATACACACTCATGTGCCTTaGTGGACAAAAACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIHTHVP*WTKTKR
Trigger: CCTCTTTGTTTTTGTCCATCAAGGCACATGAGTGTG...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGTTCTCATACACTATCTaGCACCAACTCAACTCCAGA +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVFSYTI*HQLNSR
Trigger: TCTGGAGTTGAGTTGGTGTCAGATAGTGTATGAGAA...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAGAACAAGTCTTGGAGTaGGGAATAGGTCCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LIWLPFHVENLQEMYLLREQVLE*GIGPAC
Trigger: ACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTC...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTCATTTTCACTCCCAGTaGGTACCCCAGTTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: IIGHLDVALAVHYVISQVHFHSQ*VPQLPW
Trigger: CCAAGGCAACTGGGGTACTCACTGGGAGTGAAAATG...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATACTATATGCTTCAAAATaGTGGGTGACAGCCACTCTC +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVILYASK*WVTATL
Trigger: GAGAGTGGCTGTCACCCATCATTTTGAAGCATATAG...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATTCTCACCCAGGTTTTaGGAACAAACTGCCCAATCT +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIFSPRF*EQTAQS
Trigger: AGATTGGGCAGTTTGTTCTCAAAACCTGGGTGAGAA...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGCTACTTACACACCTGTaGAGTTTTACTCAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVLLTHL*SFTQVL
Trigger: GAGCACTTGAGTAAAACTTCACAGGTGTGTAAGTAG...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGTTTGTTTGCATGTGGTaGTCATTAGGCGTTCTCATC +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVFVCMW*SLGVLI
Trigger: GATGAGAACGCCTAATGATCACCACATGCAAACAAA...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTTTTGTTTGCATGTGGTaGTCATTAGGCGTTCTCATC +
Preference number: 4 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSFVCMW*SLGVLI
Trigger: GATGAGAACGCCTAATGATCACCACATGCAAACAAA...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATAAAGTCAGAGTGGACATaGGGCCTTTGTTTTCAATCC +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIKSEWT*GLCFQS
Trigger: GGATTGAAAACAAAGGCCGCATGTCCACTCTGACTT...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCCTTGGATGTAGCTCTTaGTGTGCACTATGTTATAAG +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPLGCSS*CALCYK
Trigger: CTTATAACATAGTGCACAGCAAGAGCTACATCCAAG...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGACTTGGATGTAGCTCTTaGTGTGCACTATGTTATAAG +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRLGCSS*CALCYK
Trigger: CTTATAACATAGTGCACAGCAAGAGCTACATCCAAG...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGTTTGTATGCTGGGTCTaGTTTGAACCTGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGFVCWV*FEPEEL
Trigger: CAGCTCTTCAGGTTCAAAGCAGACCCAGCATACAAA...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTTACCTCTTAAGACAGTaGTTAGCATTTAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTYLLRQ*LAFSVP
Trigger: TGGCACACTAAATGCTAAGCACTGTCTTAAGAGGTA...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAGGAATTGAGGAAAGATaGCCCACCACCAGATCTTAC +
Preference number: 4 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRGIEER*PTTRSY
Trigger: GTAAGATCTGGTGGTGGGGCATCTTTCCTCAATTCC...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAACTTTATTGGTACACTaGACAATCACAACCATCTCG +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRTLLVH*TITTIS
Trigger: CGAGATGGTTGTGATTGTGCAGTGTACCAATAAAGT...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGACTTTATTGGTACACTaGACAATCACAACCATCTCG +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWTLLVH*TITTIS
Trigger: CGAGATGGTTGTGATTGTGCAGTGTACCAATAAAGT...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTCGTTCTGCAGAGCTCTaGCATCAAAAGTTTATAACC +
Preference number: 4 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSRSAEL*HQKFIT
Trigger: GGTTATAAACTTTTGATGCCAGAGCTCTGCAGAACG...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS-3UTR CCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGATCATGATGCTGTACTaGGTTGGTGTATTGACCAGG +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGIMMLY*VGVLTR
Trigger: CCTGGTCAATACACCAACCCAGTACAGCATCATGAT...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATAACTTGATGAAGAAGTaGGCTAAGAGGGTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYNLMKK*AKRVPD
Trigger: ATCAGGGACCCTCTTAGCCCACTTCTTCATCAAGTT...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATAACGTTTTGTTGTGTGTaGCAGAGGATGTTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVITFCCV*QRMLLG
Trigger: TCCCAACAACATCCTCTGCCACACACAACAAAACGT...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCAGAGAGGAAGACAGGTaGGTAGATAATTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCREEDR*VDNWMV
Trigger: CACCATCCAATTATCTACCCACCTGTCTTCCTCTCT...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGGGGAGAGATACAATATaGTTAGAGATTCATATGGGG +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWGRDTI*LEIHMG
Trigger: CCCCATATGAATCTCTAACCATATTGTATCTCTCCC...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGAGGGAGAGATACAATATaGTTAGAGATTCATATGGGG +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRGRDTI*LEIHMG
Trigger: CCCCATATGAATCTCTAACCATATTGTATCTCTCCC...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCGAGAAGCATAAAGGCTaGCACCTTTGTCCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCEKHKG*HLCPSS
Trigger: ACTTGAAGGACAAAGGTGCCAGCCTTTATGCTTCTC...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGAGAAGCATAAAGGCTaGCACCTTTGTCCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYEKHKG*HLCPSS
Trigger: ACTTGAAGGACAAAGGTGCCAGCCTTTATGCTTCTC...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTAGATTAAACCAGAACTaGAGCAGAAAGGAGACTCTA +
Preference number: 4 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTRLNQN*SRKETL
Trigger: TAGAGTCTCCTTTCTGCTCCAGTTCTGGTTTAATCT...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGCACTCCACATTTCTTTaGACTCTAAGTATTCTGCAC +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWHSTFL*TLSILH
Trigger: GTGCAGAATACTTAGAGTCCAAAGAAATGTGGAGTG...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGACACTCCACATTTCTTTaGACTCTAAGTATTCTGCAC +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRHSTFL*TLSILH
Trigger: GTGCAGAATACTTAGAGTCCAAAGAAATGTGGAGTG...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGGAGATATTCATGATCTaGGGAGGAACTTGCACTATT +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVEIFMI*GGTCTI
Trigger: AATAGTGCAAGTTCCTCCTCAGATCATGAATATCTC...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTGAGGAGATATTCATaGTCTGAGGAGGAACTTGCA +
Preference number: 4 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRLRRYS*SEEELA
Trigger: TGCAAGTTCCTCCTCAGATCATGAATATCTCCTCAG...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGAGTGTTCTTGGCTTTTaGGATATAGGGAGGATAGTT +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVSVLGF*DIGRIV
Trigger: AACTATCCTCCCTATATCTCAAAAGCCAAGAACACT...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTTCTCATACACTATCTaGCACCAACTCAACTCCAGA +
Preference number: 4 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCFSYTI*HQLNSR
Trigger: TCTGGAGTTGAGTTGGTGTCAGATAGTGTATGAGAA...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGTTTACCCCAGACAGATaGGGATCAACTGTAGCATTT +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGFTPDR*GSTVAF
Trigger: AAATGCTACAGTTGATCCTCATCTGTCTGGGGTAAA...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTGAAATATGTCTGTTGTaGAGAAGTCATTTTCACTCC +
Preference number: 4 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIEICLL*RSHFHS
Trigger: GGAGTGAAAATGACTTCTTCACAACAGACATATTTC...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGATTCTCACCCAGGTTTTaGGAACAAACTGCCCAATCT +
Preference number: 4 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRFSPRF*EQTAQS
Trigger: AGATTGGGCAGTTTGTTCTCAAAACCTGGGTGAGAA...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATTGCAGAAAAAGATTCTaGAACCCAGCCTCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYCRKRF*NPASVL
Trigger: CAAAACTGAGGCTGGGTTTCAGAATCTTTTTCTGCA...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAAGGTCACGTGCAAAATaGAAACAAAAGATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRRSRAK*KQKILA
Trigger: AGCAAGAATCTTTTGTTTTCATTTTGCACGTGACCT...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCAGGTCACGTGCAAAATaGAAACAAAAGATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPRSRAK*KQKILA
Trigger: AGCAAGAATCTTTTGTTTTCATTTTGCACGTGACCT...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACCTCACAACTGCACTTaGCATGTCACGAAAATTTCC +
Preference number: 4 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRPHNCT*HVTKIS
Trigger: GGAAATTTTCGTGACATGTCAAGTGCAGTTGTGAGG...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAGTGGACTCTTCACTTTaGATTGCAGAGACAGATGTG +
Preference number: 4 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRVDSSL*IAETDV
Trigger: CACATCTGTCTCTGCAATGCAAAGTGAAGAGTCCAC...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGTTTCTCCCTTCTGTTTaGAGTGTTGTGTTAATCAAG +
Preference number: 4 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWFLPSV*SVVLIK
Trigger: CTTGATTAACACAACACTGCAAACAGAAGGGAGAAA...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATCACACCTGTGCGGTCTaGAATGCCTTTATTTTGAAT +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYHTCAV*NAFILN
Trigger: ATTCAAAATAAAGGCATTGCAGACCGCACAGGTGTG...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGTACCTCTTAAGACAGTaGTTAGCATTTAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVYLLRQ*LAFSVP
Trigger: TGGCACACTAAATGCTAAGCACTGTCTTAAGAGGTA...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCAGTGAGTACCCCAGTTaGCTTGGGTTGTATTTACTT +
Preference number: 4 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCSEYPS*LGLYLL
Trigger: AAGTAAATACAACCCAAGGCAACTGGGGTACTCACT...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCTGCAAGAGATGTACTTaGTCAGACTTGTATGTTTTG +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPCKRCT*SDLYVL
Trigger: CAAAACATACAAGTCTGAGCAAGTACATCTCTTGCA...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTTGCAAGAGATGTACTTaGTCAGACTTGTATGTTTTG +
Preference number: 4 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSICKRCT*SDLYVL
Trigger: CAAAACATACAAGTCTGAGCAAGTACATCTCTTGCA...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGCACTTTGGGGTTCTCTaGTTTTCTCATGGAATAGTT +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVHFGVL*FSHGIV
Trigger: AACTATTCCATGAGAAAAGCAGAGAACCCCAAAGTG...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCGAATCTCTTTCAAAATaGTGGAAATTAGGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSESLSK*WKLGLA
Trigger: AGCTAAGCCTAATTTCCAGCATTTTGAAAGAGATTC...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAGATGCTGTACTGGGTTaGTGTATTGACCAGGATGAT +
Preference number: 4 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRDAVLG*CIDQDD
Trigger: ATCATCCTGGTCAATACACCAACCCAGTACAGCATC...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATAGTGTCTCCCTTGGGTaGATAGGATACCAGATTTTA +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYSVSLG*IGYQIL
Trigger: TAAAATCTGGTATCCTATCCACCCAAGGGAGACACT...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGGTACCCCAGTTGCCTTaGGTTGTATTTACTTTGTTG +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGVPQLP*VVFTLL
Trigger: CAACAAAGTAAATACAACCCAAGGCAACTGGGGTAC...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTTTTCTTCTGTTTCGTaGAGCACAGTTGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCFSSVS*STVAAE
Trigger: TTCTGCTGCAACTGTGCTCCACGAAACAGAAGAAAA...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCTCTCTGCTTTTCTCATaGAATAGTTCTTTCAGCATA +
Preference number: 4 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSSLLFS*NSSFSI
Trigger: TATGCTGAAAGAACTATTCCATGAGAAAAGCAGAGA...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTTCTCTTTCAAAATGCTaGAAATTAGGCTTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGSLSKC*KLGLAH
Trigger: GTGAGCTAAGCCTAATTTCCAGCATTTTGAAAGAGA...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
3UTR CAA 72 bp GTGAGGCTCAATTTTTGCCCAAATGAAACTTACGTTTaGTTGTGTGTGGCAGAGGATGTTGTTGGGAATGAT +
Preference number: 4 (lower is better)
Translates to: VRLNFCPNETYV*LCVAEDVVGND
Trigger: ATCATTCCCAACAACATCCTCTGCCACACACAACAAAACGTAAGTTTCATTTGGGCAAAAATTGAGCCTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
3UTR CAA 72 bp CAGTTTTTCTTTCTCAAGATCAAAGTCAGTATGGAATaGAGGAAAGATGCCCCACCACCAGATCTTACCTCA +
Preference number: 4 (lower is better)
Translates to: QFFFLKIKVSME*RKDAPPPDLTS
Trigger: TGAGGTAAGATCTGGTGGTGGGGCATCTTTCCTCAATTCCATACTGACTTTGATCTTGAGAAAGAAAAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGAGTGTTCTTGGCTTTTaGGATATAGGGAGGATAGTT +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGSVLGF*DIGRIV
Trigger: AACTATCCTCCCTATATCTCAAAAGCCAAGAACACT...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGCCTTTTCTGAAACATTaGAGAAAGTCAGAGTGGACA +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGPFLKH*RKSEWT
Trigger: TGTCCACTCTGACTTTCTTCAATGTTTCAGAAAAGG...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATCCTTTTCTGAAACATTaGAGAAAGTCAGAGTGGACA +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYPFLKH*RKSEWT
Trigger: TGTCCACTCTGACTTTCTTCAATGTTTCAGAAAAGG...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATTTTGGACACACCAATaGATGATTATCCTACACGTG +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIFWTHQ*MIILHV
Trigger: CACGTGTAGGATAATCATTCATTGGTGTGTCCAAAA...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGATGCCAATGTCTGCTaGTGGTGTATAAATGAATAC +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYDANVC*WCINEY
Trigger: GTATTCATTTATACACCATCAGCAGACATTGGCATC...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGATTCTCATACACTATCTaGCACCAACTCAACTCCAGA +
Preference number: 4 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRFSYTI*HQLNSR
Trigger: TCTGGAGTTGAGTTGGTGTCAGATAGTGTATGAGAA...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTAGGTCACGTGCAAAATaGAAACAAAAGATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSRSRAK*KQKILA
Trigger: AGCAAGAATCTTTTGTTTTCATTTTGCACGTGACCT...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATCTTGGATGTAGCTCTTaGTGTGCACTATGTTATAAG +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYLGCSS*CALCYK
Trigger: CTTATAACATAGTGCACAGCAAGAGCTACATCCAAG...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGTTTTCTAGGCTGATCTaGTTCCCAAGAAAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVFSRLI*FPRKCF
Trigger: AAAACACTTTCTTGGGAAGCAGATCAGCCTAGAAAA...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAGAGGTCACACTCATGTaGCTTGATGGACAAAAACAA +
Preference number: 4 (lower is better)
Translates to: LIWLPFHVENLQEMYLLREVTLM*LDGQKQ
Trigger: TTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTC...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATCACTTTGGGGTTCTCTaGTTTTCTCATGGAATAGTT +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYHFGVL*FSHGIV
Trigger: AACTATTCCATGAGAAAAGCAGAGAACCCCAAAGTG...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGAGAATCTCTTTCAAAATaGTGGAAATTAGGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRESLSK*WKLGLA
Trigger: AGCTAAGCCTAATTTCCAGCATTTTGAAAGAGATTC...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCACTTTATTGGTACACTaGACAATCACAACCATCTCG +
Preference number: 4 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCTLLVH*TITTIS
Trigger: CGAGATGGTTGTGATTGTGCAGTGTACCAATAAAGT...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTTCTTCCTTGAACCACTaGAATTCAGCCATGGGGACT +
Preference number: 4 (lower is better)
Translates to: IIGHLDVALAVHYVISQVSSLNH*NSAMGT
Trigger: AGTCCCCATGGCTGAATTCCAGTGGTTCAAGGAAGA...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATAGGGAGAGATACAATATaGTTAGAGATTCATATGGGG +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIGRDTI*LEIHMG
Trigger: CCCCATATGAATCTCTAACCATATTGTATCTCTCCC...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATAAGATTAAACCAGAACTaGAGCAGAAAGGAGACTCTA +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIRLNQN*SRKETL
Trigger: TAGAGTCTCCTTTCTGCTCCAGTTCTGGTTTAATCT...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCTCTCTGCTTTTCTCATaGAATAGTTCTTTCAGCATA +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPSLLFS*NSSFSI
Trigger: TATGCTGAAAGAACTATTCCATGAGAAAAGCAGAGA...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCTTAAAGAGGGCACCATaGAAAGAAACAAAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPLKRAP*KETKRN
Trigger: ATTCCTTTTTGTTTCTTTCCATGGTGCCCTCTTTAA...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTTTAAAGAGGGCACCATaGAAAGAAACAAAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGLKRAP*KETKRN
Trigger: ATTCCTTTTTGTTTCTTTCCATGGTGCCCTCTTTAA...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCTTTCTCGAACTTTATTaGTACACTGCACAATCACAA +
Preference number: 4 (lower is better)
Translates to: KPARDVLAQTCMFCPALPFLELY*YTAQSQ
Trigger: TTGTGATTGTGCAGTGTACCAATAAAGTTCGAGAAA...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAGAGATATTCATGATCTaGGGAGGAACTTGCACTATT +
Preference number: 4 (lower is better)
Translates to: LIWLPFHVENLQEMYLLREIFMI*GGTCTI
Trigger: AATAGTGCAAGTTCCTCCTCAGATCATGAATATCTC...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTCTGAGGAGATATTCATaGTCTGAGGAGGAACTTGCA +
Preference number: 4 (lower is better)
Translates to: IIGHLDVALAVHYVISQVLRRYS*SEEELA
Trigger: TGCAAGTTCCTCCTCAGATCATGAATATCTCCTCAG...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTCACACTCATGTGCCTTaGTGGACAAAAACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: IIGHLDVALAVHYVISQVHTHVP*WTKTKR
Trigger: CCTCTTTGTTTTTGTCCATCAAGGCACATGAGTGTG...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGATTATTTCATACAATGTaGTGCTGGCATTGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRLFHTM*CWHWCS
Trigger: GGAACACCAATGCCAGCATCACATTGTATGAAATAA...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541867.5
CDS-3UTR GCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATAGTGAGGCTCAATTTTTaGCCAAATGAAACTTACGTT +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIVRLNF*PNETYV
Trigger: AACGTAAGTTTCATTTGGGCAAAAATTGAGCCTCAC...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATTTCTCCCTTCTGTTTaGAGTGTTGTGTTAATCAAG +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIFLPSV*SVVLIK
Trigger: CTTGATTAACACAACACTGCAAACAGAAGGGAGAAA...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTCAGCTCTTGTTTGTATaGTGGGTCTGCTTTGAACCT +
Preference number: 4 (lower is better)
Translates to: IIGHLDVALAVHYVISQVQLLFV*WVCFEP
Trigger: AGGTTCAAAGCAGACCCAGCATACAAACAAGAGCTG...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATTCTCTTTCAAAATGCTaGAAATTAGGCTTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYSLSKC*KLGLAH
Trigger: GTGAGCTAAGCCTAATTTCCAGCATTTTGAAAGAGA...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGTCTCTTTCAAAATGCTaGAAATTAGGCTTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGSLSKC*KLGLAH
Trigger: GTGAGCTAAGCCTAATTTCCAGCATTTTGAAAGAGA...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
3UTR CAA 72 bp GCTTCCCTTAATTCCAAAGGGATTGACAATTTGCTTTaGTGTGTGTGTTGGTCTGTTTCATTTTGGACTGGT +
Preference number: 4 (lower is better)
Translates to: ASLNSKGIDNLL*CVCWSVSFWTG
Trigger: ACCAGTCCAAAATGAAACAGACCAACACACACACAAAAGCAAATTGTCAATCCCTTTGGAATTAAGGGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000524381.5
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTTTTACCCCAGACAGATaGGGATCAACTGTAGCATTT +
Preference number: 4 (lower is better)
Translates to: IIGHLDVALAVHYVISQVFTPDR*GSTVAF
Trigger: AAATGCTACAGTTGATCCTCATCTGTCTGGGGTAAA...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTCTCTTGTTTGTATGCTaGGTCTGCTTTGAACCTGAA +
Preference number: 4 (lower is better)
Translates to: IIGHLDVALAVHYVISQVLLFVC*VCFEPE
Trigger: TTCAGGTTCAAAGCAGACCCAGCATACAAACAAGAG...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGTTTCTCGAACTTTATTaGTACACTGCACAATCACAA +
Preference number: 4 (lower is better)
Translates to: LDVALAVHYVISQVVSSGFLELY*YTAQSQ
Trigger: TTGTGATTGTGCAGTGTACCAATAAAGTTCGAGAAA...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATTTCTCGAACTTTATTaGTACACTGCACAATCACAA +
Preference number: 4 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIFLELY*YTAQSQ
Trigger: TTGTGATTGTGCAGTGTACCAATAAAGTTCGAGAAA...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGAGATATTCATGATCTaGGGAGGAACTTGCACTATT +
Preference number: 4 (lower is better)
Translates to: IIGHLDVALAVHYVISQVEIFMI*GGTCTI
Trigger: AATAGTGCAAGTTCCTCCTCAGATCATGAATATCTC...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTAGTGTTCTTGGCTTTTaGGATATAGGGAGGATAGTT +
Preference number: 4 (lower is better)
Translates to: IIGHLDVALAVHYVISQVSVLGF*DIGRIV
Trigger: AACTATCCTCCCTATATCTCAAAAGCCAAGAACACT...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTTATTTTGTTAACCTGTaGGATCGTTGGCTTTCACAG +
Preference number: 4 (lower is better)
Translates to: IIGHLDVALAVHYVISQVYFVNL*DRWLSQ
Trigger: CTGTGAAAGCCAACGATCTCACAGGTTAACAAAATA...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR TCA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTATAAATAGAACTTGCTaGCTTCTCTTTGTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: IIGHLDVALAVHYVISQVINRTC*LLFVEG
Trigger: GCCTTCAACAAAGAGAAGTCAGCAAGTTCTATTTAT...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR GCA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGAATCTCTTTCAAAATaGTGGAAATTAGGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: IIGHLDVALAVHYVISQVESLSK*WKLGLA
Trigger: AGCTAAGCCTAATTTCCAGCATTTTGAAAGAGATTC...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CCA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTTCTCTGCTTTTCTCATaGAATAGTTCTTTCAGCATA +
Preference number: 4 (lower is better)
Translates to: IIGHLDVALAVHYVISQVSLLFS*NSSFSI
Trigger: TATGCTGAAAGAACTATTCCATGAGAAAAGCAGAGA...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS CCA 90 bp CAAGGCGGGGACGCGCAGCCGGCGCAGCCAGGGTCGTCCGGTCGGTaGCCGTCCTCTGCAGCCCGGTCGGCGACTCGCGGCCAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: QGGDAQPAQPGSSGR*PSSAARSATRGQPG
Trigger: CCCCGGCTGGCCGCGAGTCGCCGACCGGGCTGCAGAGGACGGCCACCGACCGGACGACCCTGGCTGCGCCGGCTGCGCGTCCCCGCCTTG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374778.4
CDS GCA 90 bp CCCAGTAGGCAGGATGGTACATCTCGACGCTGCGGTGCTCTCAGCTaGCGGGCTTGCTACTGCTTCTGCTGCTGCTACCGCTGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: PSRQDGTSRRCGALS*RACYCFCCCYRCCL
Trigger: AAGGCAGCAGCGGTAGCAGCAGCAGAAGCAGTAGCAAGCCCGGCAGCTGAGAGCACCGCAGCGTCGAGATGTACCATCCTGCCTACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524381.6
ENST00000529038.5
CDS-3UTR CAA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACAAGCTCTCGTCGGGGTaGCCTGCCCACTTTGGGGTT +
Preference number: 5 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDKLSSG*PAHFGV
Trigger: AACCCCAAAGTGGGCAGGCAACCCCGACGAGAGCTT...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTAAGCCCTGGCCTTCCTaGACTGACAGGTGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATKPWPS*TDRCLH
Trigger: ATGGAGACACCTGTCAGTCAAGGAAGGCCAGGGCTT...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTGAATCCCAGGCAACTTaGCTGGATGAGTCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATESQAT*LDESFS
Trigger: CGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTC...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAAGCTCTCGTCGGGGTaGCCTGCCCACTTTGGGGTT +
Preference number: 5 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSKLSSG*PAHFGV
Trigger: AACCCCAAAGTGGGCAGGCAACCCCGACGAGAGCTT...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS TCA 90 bp TGTAGACTGGGTAATGTCGCAGGCCTGTCCCCCGAAGGCCTGTATTaGGACAAGATGCATAGTGAAAGCCACGGCAATCCATTACGTCCT +
Preference number: 5 (lower is better)
Translates to: CRLGNVAGLSPEGLY*DKMHSESHGNPLRP
Trigger: AGGACGTAATGGATTGCCGTGGCTTTCACTATGCATCTTGTCTCAATACAGGCCTTCGGGGGACAGGCCTGCGACATTACCCAGTCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529019.1
CDS GCA 90 bp GTAATGTCGCAGGCCTGTCCCCCGAAGGCCTGTATTGAGACAAGATaGATAGTGAAAGCCACGGCAATCCATTACGTCCTGCTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: VMSQACPPKACIETR*IVKATAIHYVLLQG
Trigger: ACCTTGAAGCAGGACGTAATGGATTGCCGTGGCTTTCACTATGCATCTTGTCTCAATACAGGCCTTCGGGGGACAGGCCTGCGACATTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529019.1
CDS CCA 90 bp TGCGGCTTCAAGGAGAGGAGGAAATGGTTTATTAGATCACACACATaGACAGATGTACGTGTCCCCCAGCCCCAGGTCTCGCATCTGGAA +
Preference number: 5 (lower is better)
Translates to: CGFKERRKWFIRSHT*TDVRVPQPQVSHLE
Trigger: TTCCAGATGCGAGACCTGGGGCTGGGGGACACGTACATCTGTCCATGTGTGTGATCTAATAAACCATTTCCTCCTCTCCTTGAAGCCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS-3UTR CAA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCAAGGTGGCTCAGCTCTaGTTTGTATGCTGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGKVAQL*FVCWVC
Trigger: GCAGACCCAGCATACAAACAAGAGCTGAGCCACCTT...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS GCA 90 bp GAAGAAGCAAGGTGCGGGGATGAAGGTCACAGATTGCGCTTTCTCTaGCTCTCTCTTCGAGACGCTACTTTAAGATTCAGTTGGGCACGT +
Preference number: 5 (lower is better)
Translates to: EEARCGDEGHRLRFL*LSLRDATLRFSWAR
Trigger: ACGTGCCCAACTGAATCTTAAAGTAGCGTCTCGAAGAGAGAGGCAGAGAAAGCGCAATCTGTGACCTTCATCCCCGCACCTTGCTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS-3UTR CAA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTGGTGGACTCTTCACTTaGCATTGCAGAGACAGATGT +
Preference number: 5 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATGGLFT*HCRDRC
Trigger: ACATCTGTCTCTGCAATGCAAAGTGAAGAGTCCACC...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGAAGGGCAGGTCTGCGATaGATGCTGCATTCTCATCCT +
Preference number: 5 (lower is better)
Translates to: FESQATLLDESFSSQETRRAGLR*MLHSHP
Trigger: AGGATGAGAATGCAGCATCAATCGCAGACCTGCCCT...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACAACCCAGCCTCAGTTTaGAAGTTGCTAGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDNPASV*KLLESR
Trigger: CCTGGACTCTAGCAACTTCAAAACTGAGGCTGGGTT...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGAAGCTCTCGTCGGGGTaGCCTGCCCACTTTGGGGTT +
Preference number: 5 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVKLSSG*PAHFGV
Trigger: AACCCCAAAGTGGGCAGGCAACCCCGACGAGAGCTT...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTAAGCCCTGGCCTTCCTaGACTGACAGGTGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIKPWPS*TDRCLH
Trigger: ATGGAGACACCTGTCAGTCAAGGAAGGCCAGGGCTT...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCAACCTGGTTTCTTCCTaGAACCACTGGAATTCAGCC +
Preference number: 5 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGNLVSS*NHWNSA
Trigger: GGCTGAATTCCAGTGGTTCAAGGAAGAAACCAGGTT...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp GGATGGTCGAGGGTTCGCAATCTTTCTTTCTCCACCCAGTGGTGTGGAGCAACTGAGCAGACCCCATTTTaGGACACACCAATGAATGAT +
Preference number: 5 (lower is better)
Translates to: GWSRVRNLSFSTQWCGATEQTPF*DTPMND
Trigger: ATCATTCATTGGTGTGTCCAAAAATGGGGTCTGCTC...AGTTGCTCCACACCACTGGGTGGAGAAAGAAAGATTGCGAACCCTCGACCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGATGGCTCAGCTCTTGTTaGTATGCTGGGTCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: FESQATLLDESFSSQETRWLSSC*YAGSAL
Trigger: CAAAGCAGACCCAGCATACAAACAAGAGCTGAGCCA...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACAGGAATAGGTCCAGCTaGTCCATTTCAAGCACTGTG +
Preference number: 5 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDRNRSS*SISSTV
Trigger: CACAGTGCTTGAAATGGACAAGCTGGACCTATTCCT...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCAGGAATAGGTCCAGCTaGTCCATTTCAAGCACTGTG +
Preference number: 5 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGRNRSS*SISSTV
Trigger: CACAGTGCTTGAAATGGACAAGCTGGACCTATTCCT...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCGAGGTTCTGATGATCTaGGCCAAAGGAGCATGGACC +
Preference number: 5 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSEVLMI*AKGAWT
Trigger: GGTCCATGCTCCTTTGGCCAAGATCATCAGAACCTC...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTGGTTGCCTGCCCACTTaGGGGTTCTCTGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTGCLPT*GFSAFL
Trigger: GAGAAAAGCAGAGAACCCCAAAGTGGGCAGGCAACC...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTGGTTGCCTGCCCACTTaGGGGTTCTCTGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIGCLPT*GFSAFL
Trigger: GAGAAAAGCAGAGAACCCCAAAGTGGGCAGGCAACC...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS TCA 90 bp ATGCATAGTGAAAGCCACGGCAATCCATTACGTCCTGCTTCAAGGTaGGTGTGGCAAGAGGAAAACTTTCCCTCCAAAGCCTCTAGAGGA +
Preference number: 5 (lower is better)
Translates to: MHSESHGNPLRPASR*VWQEENFPSKASRG
Trigger: TCCTCTAGAGGCTTTGGAGGGAAAGTTTTCCTCTTGCCACACTCACCTTGAAGCAGGACGTAATGGATTGCCGTGGCTTTCACTATGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529019.1
CDS-3UTR CAA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCTTTTCTCTCAAGTTCTaGCTGCTAAGGAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGFSLKF*LLRKAS
Trigger: GCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGAAAA...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTAAGGTGGCTCAGCTCTaGTTTGTATGCTGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGKVAQL*FVCWVC
Trigger: GCAGACCCAGCATACAAACAAGAGCTGAGCCACCTT...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGAAGGGCAGGTCTGCGATaGATGCTGCATTCTCATCCT +
Preference number: 5 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRRAGLR*MLHSHP
Trigger: AGGATGAGAATGCAGCATCAATCGCAGACCTGCCCT...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGGAGGTTCTGATGATCTaGGCCAAAGGAGCATGGACC +
Preference number: 5 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWEVLMI*AKGAWT
Trigger: GGTCCATGCTCCTTTGGCCAAGATCATCAGAACCTC...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTTCAGACTTGTATGTTTaGTCCTGCCTTGCCCCCACC +
Preference number: 5 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSISDLYV*SCLAPT
Trigger: GGTGGGGGCAAGGCAGGACAAAACATACAAGTCTGA...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCTCAGACTTGTATGTTTaGTCCTGCCTTGCCCCCACC +
Preference number: 5 (lower is better)
Translates to: KPARDVLAQTCMFCPALPSDLYV*SCLAPT
Trigger: GGTGGGGGCAAGGCAGGACAAAACATACAAGTCTGA...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCACACGAGCACTTTCATaGGCATTACTTTGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGTRALS*ALLWWK
Trigger: CTTCCACCAAAGTAATGCCAATGAAAGTGCTCGTGT...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGACATGCTTGTTTAGACTaGCAGTCGACTGTATCAGGC +
Preference number: 5 (lower is better)
Translates to: FESQATLLDESFSSQETRHACLD*QSTVSG
Trigger: GCCTGATACAGTCGACTGCAAGTCTAAACAAGCATG...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGGGTTGCCTGCCCACTTaGGGGTTCTCTGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVGCLPT*GFSAFL
Trigger: GAGAAAAGCAGAGAACCCCAAAGTGGGCAGGCAACC...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACAAAGTCAGTATGGAATaGAGGAAAGATGCCCCACCA +
Preference number: 5 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDKVSME*RKDAPP
Trigger: TGGTGGGGCATCTTTCCTCAATTCCATACTGACTTT...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS CCA 90 bp ACAGGAGCTGTCATAAAAAGCTGCGGCTTCAAGGAGAGGAGGAAATaGTTTATTAGATCACACACATGGACAGATGTACGTGTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: TGAVIKSCGFKERRK*FIRSHTWTDVRVPQ
Trigger: CTGGGGGACACGTACATCTGTCCATGTGTGTGATCTAATAAACCATTTCCTCCTCTCCTTGAAGCCGCAGCTTTTTATGACAGCTCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS-3UTR CAA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATAAAGCCCTGGCCTTCCTaGACTGACAGGTGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIKPWPS*TDRCLH
Trigger: ATGGAGACACCTGTCAGTCAAGGAAGGCCAGGGCTT...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTTTGGTGTTCCCAAGCTaGTTCGTGGCCACACAAGTA +
Preference number: 5 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSILVFPS*FVATQV
Trigger: TACTTGTGTGGCCACGAACAAGCTTGGGAACACCAA...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTGTGTGGCAGAGGATGTaGTTGGGAATGATGATGAGG +
Preference number: 5 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGVWQRM*LGMMMR
Trigger: CCTCATCATCATTCCCAACAACATCCTCTGCCACAC...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGAGTGTGGCAGAGGATGTaGTTGGGAATGATGATGAGG +
Preference number: 5 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRVWQRM*LGMMMR
Trigger: CCTCATCATCATTCCCAACAACATCCTCTGCCACAC...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCGAAACTTACGTTTTGTaGTGTGTGGCAGAGGATGTT +
Preference number: 5 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGETYVL*CVAEDV
Trigger: AACATCCTCTGCCACACACAACAAAACGTAAGTTTC...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGACAGATAATAGGACACTaGGATGTAGCTCTTGCTGTG +
Preference number: 5 (lower is better)
Translates to: FESQATLLDESFSSQETRQIIGH*DVALAV
Trigger: CACAGCAAGAGCTACATCCAAGTGTCCTATTATCTG...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGAAGGTGGCTCAGCTCTaGTTTGTATGCTGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVKVAQL*FVCWVC
Trigger: GCAGACCCAGCATACAAACAAGAGCTGAGCCACCTT...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGGAATCCCAGGCAACTTaGCTGGATGAGTCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVESQAT*LDESFS
Trigger: CGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTC...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGAGGGCAGGTCTGCGATaGATGCTGCATTCTCATCCT +
Preference number: 5 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVRAGLR*MLHSHP
Trigger: AGGATGAGAATGCAGCATCAATCGCAGACCTGCCCT...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGGAGGTTCTGATGATCTaGGCCAAAGGAGCATGGACC +
Preference number: 5 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVEVLMI*AKGAWT
Trigger: GGTCCATGCTCCTTTGGCCAAGATCATCAGAACCTC...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTGCCAGCCTTGTTGGGTaGAGAGGTTCTGATGATCTT +
Preference number: 5 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTASLVG*RGSDDL
Trigger: AAGATCATCAGAACCTCTCAACCCAACAAGGCTGGC...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTGCCAGCCTTGTTGGGTaGAGAGGTTCTGATGATCTT +
Preference number: 5 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIASLVG*RGSDDL
Trigger: AAGATCATCAGAACCTCTCAACCCAACAAGGCTGGC...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ACTGGGAATCAATGCACCATTCCTGGCACATCAGTTACGGTTCCCGAATCTGGCTGTACTTGCTCAGACTaGTATGTTTTGTCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: TGNQCTIPGTSVTVPESGCTCSD*YVLSCL
Trigger: AAGGCAGGACAAAACATACAAGTCTGAGCAAGTACA...GCCAGATTCGGGAACCGTAACTGATGTGCCAGGAATGGTGCATTGATTCCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGAGAATGGGCACACCCATaGTCTGACACAGCTATAACG +
Preference number: 5 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQREWAHP*SDTAIT
Trigger: CGTTATAGCTGTGTCAGACAATGGGTGTGCCCATTC...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTGAATGGGCACACCCATaGTCTGACACAGCTATAACG +
Preference number: 5 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGEWAHP*SDTAIT
Trigger: CGTTATAGCTGTGTCAGACAATGGGTGTGCCCATTC...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS CCA 90 bp CGCTTTCTCTGCCTCTCTCTTCGAGACGCTACTTTAAGATTCAGTTaGGCACGTTCTGCAGAGCTCTGGCATCAAAAGTTTATAACCCAA +
Preference number: 5 (lower is better)
Translates to: RFLCLSLRDATLRFS*ARSAELWHQKFITQ
Trigger: TTGGGTTATAAACTTTTGATGCCAGAGCTCTGCAGAACGTGCCCAACTGAATCTTAAAGTAGCGTCTCGAAGAGAGAGGCAGAGAAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS CCA 90 bp CCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATaGAGAAGCAGGCGTTGCTCAGAGGACCTAGGATTTCTTATCAAA +
Preference number: 5 (lower is better)
Translates to: PKLVCSPQCRLKSVI*RSRRCSEDLGFLIK
Trigger: TTTGATAAGAAATCCTAGGTCCTCTGAGCAACGCCTGCTTCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000524381.6
ENST00000529038.5
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTGATGAAGGTCACAGATaGCGCTTTCTCTGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSDEGHR*RFLCLS
Trigger: AGAGAGGCAGAGAAAGCGCAATCTGTGACCTTCATC...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS-3UTR CAA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTTACTGGGTTGGTGTATaGACCAGGATGATCACACGA +
Preference number: 5 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIYWVGV*TRMITR
Trigger: TCGTGTGATCATCCTGGTCAATACACCAACCCAGTA...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCTACTGGGTTGGTGTATaGACCAGGATGATCACACGA +
Preference number: 5 (lower is better)
Translates to: KPARDVLAQTCMFCPALPYWVGV*TRMITR
Trigger: TCGTGTGATCATCCTGGTCAATACACCAACCCAGTA...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGACAGTGTTCTTGGCTTTaGAGATATAGGGAGGATAGT +
Preference number: 5 (lower is better)
Translates to: FESQATLLDESFSSQETRQCSWL*RYREDS
Trigger: ACTATCCTCCCTATATCTCAAAAGCCAAGAACACTG...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTAACCTGGTTTCTTCCTaGAACCACTGGAATTCAGCC +
Preference number: 5 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTNLVSS*NHWNSA
Trigger: GGCTGAATTCCAGTGGTTCAAGGAAGAAACCAGGTT...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAGTGGACATGCGGCCTTaGTTTTCAATCCTCATTCCA +
Preference number: 5 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRVDMRP*FSILIP
Trigger: TGGAATGAGGATTGAAAACAAAGGCCGCATGTCCAC...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTTTGGTGTTCCCAAGCTaGTTCGTGGCCACACAAGTA +
Preference number: 5 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSLVFPS*FVATQV
Trigger: TACTTGTGTGGCCACGAACAAGCTTGGGAACACCAA...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCGAGCAGACCCCATTTTaGGACACACCAATGAATGAT +
Preference number: 5 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSEQTPF*DTPMND
Trigger: ATCATTCATTGGTGTGTCCAAAAATGGGGTCTGCTC...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTGGTGGACTCTTCACTTaGCATTGCAGAGACAGATGT +
Preference number: 5 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSIGGLFT*HCRDRC
Trigger: ACATCTGTCTCTGCAATGCAAAGTGAAGAGTCCACC...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGAAAACAAATACCAGAGTaGTCAATACACCCGCCATGT +
Preference number: 5 (lower is better)
Translates to: FESQATLLDESFSSQETRKQIPE*SIHPPC
Trigger: ACATGGCGGGTGTATTGACAACTCTGGTATTTGTTT...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGGAATCCCAGGCAACTTaGCTGGATGAGTCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: LDVALAVHYVISQVVSSGESQAT*LDESFS
Trigger: CGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTC...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGACCCAGTTGCCTTGGGTaGTATTTACTTTGTTGTCTT +
Preference number: 5 (lower is better)
Translates to: FESQATLLDESFSSQETRPSCLG*YLLCCL
Trigger: AAGACAACAAAGTAAATACAACCCAAGGCAACTGGG...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGATGTACTTGCTCAGACTaGTATGTTTTGTCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: FESQATLLDESFSSQETRCTCSD*YVLSCL
Trigger: AAGGCAGGACAAAACATACAAGTCTGAGCAAGTACA...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACTTCATTGGCATTACTTaGGTGGAAGTGCATATGAAC +
Preference number: 5 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDFIGIT*VEVHMN
Trigger: GTTCATATGCACTTCCACCAAAGTAATGCCAATGAA...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TGGCATTACTTTGGTGGAAGTGCATATGAACTCTGTTTTGGGAAGGGGAAGGGTCATGCTTGTTTAGACTaGCAGTCGACTGTATCAGGC +
Preference number: 5 (lower is better)
Translates to: WHYFGGSAYELCFGKGKGHACLD*QSTVSG
Trigger: GCCTGATACAGTCGACTGCAAGTCTAAACAAGCATG...ACCCTTCCCCTTCCCAAAACAGAGTTCATATGCACTTCCACCAAAGTAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CTTCCCCAAAGCCATTGGAGAAGCAGCTGCATCAGAGGAAACTGTGTCACTGACAAAGGGATTGACAATTaGCTTTTGTGTGTGTGTTGG +
Preference number: 5 (lower is better)
Translates to: LPQSHWRSSCIRGNCVTDKGIDN*LLCVCW
Trigger: CCAACACACACACAAAAGCAAATTGTCAATCCCTTT...GTCAGTGACACAGTTTCCTCTGATGCAGCTGCTTCTCCAATGGCTTTGGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS GCA 90 bp CCTCTCTCTTCGAGACGCTACTTTAAGATTCAGTTGGGCACGTTCTaGAGAGCTCTGGCATCAAAAGTTTATAACCCAAAGAAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: PLSSRRYFKIQLGTF*RALASKVYNPKKKA
Trigger: TGCCTTCTTCTTTGGGTTATAAACTTTTGATGCCAGAGCTCTGCAGAACGTGCCCAACTGAATCTTAAAGTAGCGTCTCGAAGAGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS CCA 90 bp CGAGACGCTACTTTAAGATTCAGTTGGGCACGTTCTGCAGAGCTCTaGCATCAAAAGTTTATAACCCAAAGAAGAAGGCAAGTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: RDATLRFSWARSAEL*HQKFITQRRRQVSL
Trigger: CAGAGACACTTGCCTTCTTCTTTGGGTTATAAACTTTTGATGCCAGAGCTCTGCAGAACGTGCCCAACTGAATCTTAAAGTAGCGTCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS-3UTR CAA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGTACTGGGTTGGTGTATaGACCAGGATGATCACACGA +
Preference number: 5 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVYWVGV*TRMITR
Trigger: TCGTGTGATCATCCTGGTCAATACACCAACCCAGTA...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCCAGTGTTCTTGGCTTTaGAGATATAGGGAGGATAGT +
Preference number: 5 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSQCSWL*RYREDS
Trigger: ACTATCCTCCCTATATCTCAAAAGCCAAGAACACTG...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGAACCTGGTTTCTTCCTaGAACCACTGGAATTCAGCC +
Preference number: 5 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVNLVSS*NHWNSA
Trigger: GGCTGAATTCCAGTGGTTCAAGGAAGAAACCAGGTT...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGGTGGACATGCGGCCTTaGTTTTCAATCCTCATTCCA +
Preference number: 5 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVVDMRP*FSILIP
Trigger: TGGAATGAGGATTGAAAACAAAGGCCGCATGTCCAC...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATTGGTGTTCCCAAGCTaGTTCGTGGCCACACAAGTA +
Preference number: 5 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVILVFPS*FVATQV
Trigger: TACTTGTGTGGCCACGAACAAGCTTGGGAACACCAA...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATTTGGTGTTCCCAAGCTaGTTCGTGGCCACACAAGTA +
Preference number: 5 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYLVFPS*FVATQV
Trigger: TACTTGTGTGGCCACGAACAAGCTTGGGAACACCAA...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGGAGCAGACCCCATTTTaGGACACACCAATGAATGAT +
Preference number: 5 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWEQTPF*DTPMND
Trigger: ATCATTCATTGGTGTGTCCAAAAATGGGGTCTGCTC...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTGGTGGACTCTTCACTTaGCATTGCAGAGACAGATGT +
Preference number: 5 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSGGLFT*HCRDRC
Trigger: ACATCTGTCTCTGCAATGCAAAGTGAAGAGTCCACC...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGGCCAGCCTTGTTGGGTaGAGAGGTTCTGATGATCTT +
Preference number: 5 (lower is better)
Translates to: LDVALAVHYVISQVVSSGASLVG*RGSDDL
Trigger: AAGATCATCAGAACCTCTCAACCCAACAAGGCTGGC...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAAGGAGCATGGACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCTCTCCGTGTGTGAAGTaGGAAAAGTGTGGATATTGT +
Preference number: 5 (lower is better)
Translates to: KGAWTLSCRTSLGVRNRSSPCVK*EKCGYC
Trigger: ACAATATCCACACTTTTCCAACTTCACACACGGAGA...GGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGTCCATGCTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGACTGCAAGAGATGTACTaGCTCAGACTTGTATGTTTT +
Preference number: 5 (lower is better)
Translates to: FESQATLLDESFSSQETRLQEMY*LRLVCF
Trigger: AAAACATACAAGTCTGAGCAAGTACATCTCTTGCAG...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGACATATGAACTCTGTTTaGGGAAGGGGAAGGGTTTCA +
Preference number: 5 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRHMNSV*GRGRVS
Trigger: TGAAACCCTTCCCCTTCCCAAAACAGAGTTCATATG...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAACACGAGCACTTTCATaGGCATTACTTTGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRTRALS*ALLWWK
Trigger: CTTCCACCAAAGTAATGCCAATGAAAGTGCTCGTGT...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTACACGAGCACTTTCATaGGCATTACTTTGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTTRALS*ALLWWK
Trigger: CTTCCACCAAAGTAATGCCAATGAAAGTGCTCGTGT...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAGCCTCAGTTTTGAAGTaGCTAGAGTCCAGGAATAGT +
Preference number: 5 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRASVLK*LESRNS
Trigger: ACTATTCCTGGACTCTAGCAACTTCAAAACTGAGGC...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAACAGCCAACCAGCACTaGAAAATTCAATGTACAGCC +
Preference number: 5 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRTANQH*KIQCTA
Trigger: GGCTGTACATTGAATTTTCAAGTGCTGGTTGGCTGT...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTACAGCCAACCAGCACTaGAAAATTCAATGTACAGCC +
Preference number: 5 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTTANQH*KIQCTA
Trigger: GGCTGTACATTGAATTTTCAAGTGCTGGTTGGCTGT...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGACAGTGTTCTTGGCTTTaGAGATATAGGGAGGATAGT +
Preference number: 5 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRQCSWL*RYREDS
Trigger: ACTATCCTCCCTATATCTCAAAAGCCAAGAACACTG...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGAACCTGGTTTCTTCCTaGAACCACTGGAATTCAGCC +
Preference number: 5 (lower is better)
Translates to: LDVALAVHYVISQVVSSGNLVSS*NHWNSA
Trigger: GGCTGAATTCCAGTGGTTCAAGGAAGAAACCAGGTT...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATAGTGGACATGCGGCCTTaGTTTTCAATCCTCATTCCA +
Preference number: 5 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIVDMRP*FSILIP
Trigger: TGGAATGAGGATTGAAAACAAAGGCCGCATGTCCAC...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGGTGGACATGCGGCCTTaGTTTTCAATCCTCATTCCA +
Preference number: 5 (lower is better)
Translates to: LDVALAVHYVISQVVSSGVDMRP*FSILIP
Trigger: TGGAATGAGGATTGAAAACAAAGGCCGCATGTCCAC...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTGAAACTTACGTTTTGTaGTGTGTGGCAGAGGATGTT +
Preference number: 5 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTETYVL*CVAEDV
Trigger: AACATCCTCTGCCACACACAACAAAACGTAAGTTTC...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTCAGATAATAGGACACTaGGATGTAGCTCTTGCTGTG +
Preference number: 5 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSQIIGH*DVALAV
Trigger: CACAGCAAGAGCTACATCCAAGTGTCCTATTATCTG...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGATGGCTCAGCTCTTGTTaGTATGCTGGGTCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRWLSSC*YAGSAL
Trigger: CAAAGCAGACCCAGCATACAAACAAGAGCTGAGCCA...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGACCTTTAATTCTGATTTaGCGCCTGCTCATGATCATC +
Preference number: 5 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRPLILI*RLLMII
Trigger: GATGATCATGAGCAGGCGCAAAATCAGAATTAAAGG...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTCCTTTAATTCTGATTTaGCGCCTGCTCATGATCATC +
Preference number: 5 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTPLILI*RLLMII
Trigger: GATGATCATGAGCAGGCGCAAAATCAGAATTAAAGG...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TTTGAATCCCAGGCAACTTTGCTGGATGAGTCCTTCTCGTCCCAGGAGACAAGAGTTGTATTTACTTTGTaGTCTTTACCCCAGACAGAT +
Preference number: 5 (lower is better)
Translates to: FESQATLLDESFSSQETRVVFTL*SLPQTD
Trigger: ATCTGTCTGGGGTAAAGACAACAAAGTAAATACAAC...TCTTGTCTCCTGGGACGAGAAGGACTCATCCAGCAAAGTTGCCTGGGATTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCCCCAGTTGCCTTGGGTaGTATTTACTTTGTTGTCTT +
Preference number: 5 (lower is better)
Translates to: KPARDVLAQTCMFCPALPPSCLG*YLLCCL
Trigger: AAGACAACAAAGTAAATACAACCCAAGGCAACTGGG...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGTCTCCGTGTGTGAAGTaGGAAAAGTGTGGATATTGT +
Preference number: 5 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWSPCVK*EKCGYC
Trigger: ACAATATCCACACTTTTCCAACTTCACACACGGAGA...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTTCTCCGTGTGTGAAGTaGGAAAAGTGTGGATATTGT +
Preference number: 5 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSISPCVK*EKCGYC
Trigger: ACAATATCCACACTTTTCCAACTTCACACACGGAGA...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGCCTAACAGGACTTATTaGGCTTCCTTTTCATGTGGA +
Preference number: 5 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWPNRTY*ASFSCG
Trigger: TCCACATGAAAAGGAAGCCAAATAAGTCCTGTTAGG...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGACCTAACAGGACTTATTaGGCTTCCTTTTCATGTGGA +
Preference number: 5 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRPNRTY*ASFSCG
Trigger: TCCACATGAAAAGGAAGCCAAATAAGTCCTGTTAGG...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTCCTAACAGGACTTATTaGGCTTCCTTTTCATGTGGA +
Preference number: 5 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTPNRTY*ASFSCG
Trigger: TCCACATGAAAAGGAAGCCAAATAAGTCCTGTTAGG...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTCATATGAACTCTGTTTaGGGAAGGGGAAGGGTTTCA +
Preference number: 5 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSHMNSV*GRGRVS
Trigger: TGAAACCCTTCCCCTTCCCAAAACAGAGTTCATATG...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGGCCTCAGTTTTGAAGTaGCTAGAGTCCAGGAATAGT +
Preference number: 5 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVASVLK*LESRNS
Trigger: ACTATTCCTGGACTCTAGCAACTTCAAAACTGAGGC...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAAACCCAGCCTCAGTTTaGAAGTTGCTAGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRNPASV*KLLESR
Trigger: CCTGGACTCTAGCAACTTCAAAACTGAGGCTGGGTT...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGAAAGTCAGTATGGAATaGAGGAAAGATGCCCCACCA +
Preference number: 5 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVKVSME*RKDAPP
Trigger: TGGTGGGGCATCTTTCCTCAATTCCATACTGACTTT...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTGACTGGCAGTTTTGTTaGTTTGCATGTGGTGATCAT +
Preference number: 5 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTDWQFC*FACGDH
Trigger: ATGATCACCACATGCAAACAAACAAAACTGCCAGTC...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTCCACTCCACATTTCTTaGGACTCTAAGTATTCTGCA +
Preference number: 5 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTPLHIS*DSKYSA
Trigger: TGCAGAATACTTAGAGTCCAAAGAAATGTGGAGTGG...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGACCACTCCACATTTCTTaGGACTCTAAGTATTCTGCA +
Preference number: 5 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRPLHIS*DSKYSA
Trigger: TGCAGAATACTTAGAGTCCAAAGAAATGTGGAGTGG...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGTCCTCACAACTGCACTaGACATGTCACGAAAATTTC +
Preference number: 5 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWSSQLH*TCHENF
Trigger: GAAATTTTCGTGACATGTCAAGTGCAGTTGTGAGGA...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ACCCTTTCCTGTAGAACAAGTCTTGGAGTGAGGAATAGGTCCAGCTTGTCCATTTCCTCACAACTGCACTaGACATGTCACGAAAATTTC +
Preference number: 5 (lower is better)
Translates to: TLSCRTSLGVRNRSSLSISSQLH*TCHENF
Trigger: GAAATTTTCGTGACATGTCAAGTGCAGTTGTGAGGA...AATGGACAAGCTGGACCTATTCCTCACTCCAAGACTTGTTCTACAGGAAAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCAATGAAACTTACGTTTaGTTGTGTGTGGCAGAGGAT +
Preference number: 5 (lower is better)
Translates to: KPARDVLAQTCMFCPALPNETYV*LCVAED
Trigger: ATCCTCTGCCACACACAACAAAACGTAAGTTTCATT...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAATGAAACTTACGTTTaGTTGTGTGTGGCAGAGGAT +
Preference number: 5 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWNETYV*LCVAED
Trigger: ATCCTCTGCCACACACAACAAAACGTAAGTTTCATT...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGCAGATAATAGGACACTaGGATGTAGCTCTTGCTGTG +
Preference number: 5 (lower is better)
Translates to: LDVALAVHYVISQVVSSGQIIGH*DVALAV
Trigger: CACAGCAAGAGCTACATCCAAGTGTCCTATTATCTG...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGTTTTCTCTCAAGTTCTaGCTGCTAAGGAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: LDVALAVHYVISQVVSSGFSLKF*LLRKAS
Trigger: GCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGAAAA...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATTTTCTCTCAAGTTCTaGCTGCTAAGGAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIFSLKF*LLRKAS
Trigger: GCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGAAAA...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAACTCTTCACTTTGCATaGCAGAGACAGATGTGTTTT +
Preference number: 5 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRTLHFA*QRQMCF
Trigger: AAAACACATCTGTCTCTGCAATGCAAAGTGAAGAGT...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTACTCTTCACTTTGCATaGCAGAGACAGATGTGTTTT +
Preference number: 5 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTTLHFA*QRQMCF
Trigger: AAAACACATCTGTCTCTGCAATGCAAAGTGAAGAGT...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTAAACAAATACCAGAGTaGTCAATACACCCGCCATGT +
Preference number: 5 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSKQIPE*SIHPPC
Trigger: ACATGGCGGGTGTATTGACAACTCTGGTATTTGTTT...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGCTTTCTCCCTTCTGTTaGCAGTGTTGTGTTAATCAA +
Preference number: 5 (lower is better)
Translates to: KKPKLVCSPQCRLKSVIWLSPFC*QCCVNQ
Trigger: TTGATTAACACAACACTGCAAACAGAAGGGAGAAAG...CCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGACTTTCTCCCTTCTGTTaGCAGTGTTGTGTTAATCAA +
Preference number: 5 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRLSPFC*QCCVNQ
Trigger: TTGATTAACACAACACTGCAAACAGAAGGGAGAAAG...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGTGCAATGCCTTTATTTaGAATCCCAGGCAACTTTGC +
Preference number: 5 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVCNAFI*NPRQLC
Trigger: GCAAAGTTGCCTGGGATTCAAAATAAAGGCATTGCA...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTTCAGACTTGTATGTTTaGTCCTGCCTTGCCCCCACC +
Preference number: 5 (lower is better)
Translates to: IIGHLDVALAVHYVISQVSDLYV*SCLAPT
Trigger: GGTGGGGGCAAGGCAGGACAAAACATACAAGTCTGA...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TGTTTCCCCATGGCAGAGGTCACACTCATGTGCCTTGATGGACAAAAACAAAGATTCATTGGCATTACTTaGGTGGAAGTGCATATGAAC +
Preference number: 5 (lower is better)
Translates to: CFPMAEVTLMCLDGQKQRFIGIT*VEVHMN
Trigger: GTTCATATGCACTTCCACCAAAGTAATGCCAATGAA...TCTTTGTTTTTGTCCATCAAGGCACATGAGTGTGACCTCTGCCATGGGGAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGGCCTCAGTTTTGAAGTaGCTAGAGTCCAGGAATAGT +
Preference number: 5 (lower is better)
Translates to: LDVALAVHYVISQVVSSGASVLK*LESRNS
Trigger: ACTATTCCTGGACTCTAGCAACTTCAAAACTGAGGC...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATAACAGCCAACCAGCACTaGAAAATTCAATGTACAGCC +
Preference number: 5 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVITANQH*KIQCTA
Trigger: GGCTGTACATTGAATTTTCAAGTGCTGGTTGGCTGT...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGAAAGTCAGTATGGAATaGAGGAAAGATGCCCCACCA +
Preference number: 5 (lower is better)
Translates to: LDVALAVHYVISQVVSSGKVSME*RKDAPP
Trigger: TGGTGGGGCATCTTTCCTCAATTCCATACTGACTTT...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGGACTGGCAGTTTTGTTaGTTTGCATGTGGTGATCAT +
Preference number: 5 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVDWQFC*FACGDH
Trigger: ATGATCACCACATGCAAACAAACAAAACTGCCAGTC...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATACAGTGTTCTTGGCTTTaGAGATATAGGGAGGATAGT +
Preference number: 5 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIQCSWL*RYREDS
Trigger: ACTATCCTCCCTATATCTCAAAAGCCAAGAACACTG...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGACCACAACACAGGGTATaGCTTTTGTATTTTGTTAAC +
Preference number: 5 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRPQHRV*LLYFVN
Trigger: GTTAACAAAATACAAAAGCAATACCCTGTGTTGTGG...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCAAACAAATACCAGAGTaGTCAATACACCCGCCATGT +
Preference number: 5 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCKQIPE*SIHPPC
Trigger: ACATGGCGGGTGTATTGACAACTCTGGTATTTGTTT...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AACAAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGCTGCAAGAGATGTACTaGCTCAGACTTGTATGTTTT +
Preference number: 5 (lower is better)
Translates to: NKKKPKLVCSPQCRLKSVLQEMY*LRLVCF
Trigger: AAAACATACAAGTCTGAGCAAGTACATCTCTTGCAG...CACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTTTCATTGGCATTACTTaGGTGGAAGTGCATATGAAC +
Preference number: 5 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSFIGIT*VEVHMN
Trigger: GTTCATATGCACTTCCACCAAAGTAATGCCAATGAA...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTAACCCAGCCTCAGTTTaGAAGTTGCTAGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: IIGHLDVALAVHYVISQVNPASV*KLLESR
Trigger: CCTGGACTCTAGCAACTTCAAAACTGAGGCTGGGTT...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAGGCAAATTGACTGAATaGATGCAGAAAAAGATTCTG +
Preference number: 5 (lower is better)
Translates to: KPKLVCSPQCRLKSVIWRGKLTE*MQKKIL
Trigger: CAGAATCTTTTTCTGCATCAATTCAGTCAATTTGCC...TCTCCATATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTTTGTCCTGCCTTGCCCGGCAAATTGACTGAATaGATGCAGAAAAAGATTCTG +
Preference number: 5 (lower is better)
Translates to: KPARDVLAQTCMFCPALPGKLTE*MQKKIL
Trigger: CAGAATCTTTTTCTGCATCAATTCAGTCAATTTGCC...GGGCAAGGCAGGACAAAACATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATTCCTCACAACTGCACTaGACATGTCACGAAAATTTC +
Preference number: 5 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYSSQLH*TCHENF
Trigger: GAAATTTTCGTGACATGTCAAGTGCAGTTGTGAGGA...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TCTCTCAAGTTCTTGCTGCTAAGGAAAGCCAGCCATAGGTTCCTGACATGTACTATTTCTCGAACTTTATaGGTACACTGCACAATCACA +
Preference number: 5 (lower is better)
Translates to: SLKFLLLRKASHRFLTCTISRTL*VHCTIT
Trigger: TGTGATTGTGCAGTGTACCAATAAAGTTCGAGAAAT...AGTACATGTCAGGAACCTATGGCTGGCTTTCCTTAGCAGCAAGAACTTGAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTTACTGGGTTGGTGTATaGACCAGGATGATCACACGA +
Preference number: 5 (lower is better)
Translates to: IIGHLDVALAVHYVISQVYWVGV*TRMITR
Trigger: TCGTGTGATCATCCTGGTCAATACACCAACCCAGTA...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGACTCTTCACTTTGCATaGCAGAGACAGATGTGTTTT +
Preference number: 5 (lower is better)
Translates to: LDVALAVHYVISQVVSSGTLHFA*QRQMCF
Trigger: AAAACACATCTGTCTCTGCAATGCAAAGTGAAGAGT...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp TTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTGTGTCTTCAGGGCTTTCTCCCTTCTGTTaGCAGTGTTGTGTTAATCAA +
Preference number: 5 (lower is better)
Translates to: LDVALAVHYVISQVVSSGLSPFC*QCCVNQ
Trigger: TTGATTAACACAACACTGCAAACAGAAGGGAGAAAG...CCCTGAAGACACAACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGATGCAATGCCTTTATTTaGAATCCCAGGCAACTTTGC +
Preference number: 5 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRCNAFI*NPRQLC
Trigger: GCAAAGTTGCCTGGGATTCAAAATAAAGGCATTGCA...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACCCAGTTGCCTTGGGTaGTATTTACTTTGTTGTCTT +
Preference number: 5 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRPSCLG*YLLCCL
Trigger: AAGACAACAAAGTAAATACAACCCAAGGCAACTGGG...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGATGTACTTGCTCAGACTaGTATGTTTTGTCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRCTCSD*YVLSCL
Trigger: AAGGCAGGACAAAACATACAAGTCTGAGCAAGTACA...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTCATGCTTGTTTAGACTaGCAGTCGACTGTATCAGGC +
Preference number: 5 (lower is better)
Translates to: IIGHLDVALAVHYVISQVHACLD*QSTVSG
Trigger: GCCTGATACAGTCGACTGCAAGTCTAAACAAGCATG...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTGGCAAATTGACTGAATaGATGCAGAAAAAGATTCTG +
Preference number: 5 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSGKLTE*MQKKIL
Trigger: CAGAATCTTTTTCTGCATCAATTCAGTCAATTTGCC...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATAAAGGGATTGACAATTaGCTTTTGTGTGTGTGTTGG +
Preference number: 5 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYKGIDN*LLCVCW
Trigger: CCAACACACACACAAAAGCAAATTGTCAATCCCTTT...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CAGATGCTGAAGGTGGTGACAGATCTGAAACGTCTATGTGCGACCTTTAATTCTTCATATGGTCTCTTTTaGAAAATGTTGCCTTCCTAC +
Preference number: 5 (lower is better)
Translates to: QMLKVVTDLKRLCATFNSSYGLF*KMLPSY
Trigger: GTAGGAAGGCAACATTTTCAAAAAGAGACCATATGA...AGAATTAAAGGTCGCACATAGACGTTTCAGATCTGTCACCACCTTCAGCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAGACTGGCAGTTTTGTTaGTTTGCATGTGGTGATCAT +
Preference number: 5 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRDWQFC*FACGDH
Trigger: ATGATCACCACATGCAAACAAACAAAACTGCCAGTC...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCCCACAACACAGGGTATaGCTTTTGTATTTTGTTAAC +
Preference number: 5 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCPQHRV*LLYFVN
Trigger: GTTAACAAAATACAAAAGCAATACCCTGTGTTGTGG...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp AAAAAGAAGCCCAAGCTGGTTTGCTCTCCGCAGTGTAGATTAAAGTCTGTGATAGTTGTATTTACTTTGTaGTCTTTACCCCAGACAGAT +
Preference number: 5 (lower is better)
Translates to: KKKPKLVCSPQCRLKSVIVVFTL*SLPQTD
Trigger: ATCTGTCTGGGGTAAAGACAACAAAGTAAATACAAC...TATCACAGACTTTAATCTACACTGCGGAGAGCAAACCAGCTTGGGCTTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp GGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGACTTGTATGTTGTATTTACTTTGTaGTCTTTACCCCAGACAGAT +
Preference number: 5 (lower is better)
Translates to: GFLFMWKTCKRCTCSDLYVVFTL*SLPQTD
Trigger: ATCTGTCTGGGGTAAAGACAACAAAGTAAATACAAC...ATACAAGTCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTCATATGAACTCTGTTTaGGGAAGGGGAAGGGTTTCA +
Preference number: 5 (lower is better)
Translates to: IIGHLDVALAVHYVISQVHMNSV*GRGRVS
Trigger: TGAAACCCTTCCCCTTCCCAAAACAGAGTTCATATG...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CAGGACTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCATATGGTCTCTTTTaGAAAATGTTGCCTTCCTAC +
Preference number: 5 (lower is better)
Translates to: QDLFGFLFMWKTCKRCTCSYGLF*KMLPSY
Trigger: GTAGGAAGGCAACATTTTCAAAAAGAGACCATATGA...GCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAGTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTCCTTTAATTCTGATTTaGCGCCTGCTCATGATCATC +
Preference number: 5 (lower is better)
Translates to: IIGHLDVALAVHYVISQVPLILI*RLLMII
Trigger: GATGATCATGAGCAGGCGCAAAATCAGAATTAAAGG...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTCCACTCCACATTTCTTaGGACTCTAAGTATTCTGCA +
Preference number: 5 (lower is better)
Translates to: IIGHLDVALAVHYVISQVPLHIS*DSKYSA
Trigger: TGCAGAATACTTAGAGTCCAAAGAAATGTGGAGTGG...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp CTTATTTGGCTTCCTTTTCATGTGGAAAACCTGCAAGAGATGTACTTGCTCAGAATTTCTCGAACTTTATaGGTACACTGCACAATCACA +
Preference number: 5 (lower is better)
Translates to: LIWLPFHVENLQEMYLLRISRTL*VHCTIT
Trigger: TGTGATTGTGCAGTGTACCAATAAAGTTCGAGAAAT...TCTGAGCAAGTACATCTCTTGCAGGTTTTCCACATGAAAAGGAAGCCAAATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS-3UTR CAA 90 bp ATAATAGGACACTTGGATGTAGCTCTTGCTGTGCACTATGTTATAAGTCAAGTTAAAGGGATTGACAATTaGCTTTTGTGTGTGTGTTGG +
Preference number: 5 (lower is better)
Translates to: IIGHLDVALAVHYVISQVKGIDN*LLCVCW
Trigger: CCAACACACACACAAAAGCAAATTGTCAATCCCTTT...AACTTGACTTATAACATAGTGCACAGCAAGAGCTACATCCAAGTGTCCTATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331898.11
ENST00000541867.5
ENST00000612177.4
CDS GCA 72 bp GGCGCAGCCAGGGTCGTCCGGTCGGTGGCCGTCCTCTaGAGCCCGGTCGGCGACTCGCGGCCAGCCGGGGGA +
Preference number: 6 (lower is better)
Translates to: GAARVVRSVAVL*SPVGDSRPAGG
Trigger: TCCCCCGGCTGGCCGCGAGTCGCCGACCGGGCTGCAGAGGACGGCCACCGACCGGACGACCCTGGCTGCGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374778.4
CDS CCA 72 bp GACGCGCAGCCGGCGCAGCCAGGGTCGTCCGGTCGGTaGCCGTCCTCTGCAGCCCGGTCGGCGACTCGCGGC +
Preference number: 6 (lower is better)
Translates to: DAQPAQPGSSGR*PSSAARSATRG
Trigger: GCCGCGAGTCGCCGACCGGGCTGCAGAGGACGGCCACCGACCGGACGACCCTGGCTGCGCCGGCTGCGCGTC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374778.4
CDS TCA 72 bp GGAAGGAGAAGAGAGGAGTCCGGGCTCTCCGGAGTCTaGGAATTCTTCCTCAGATCCTGCCTCAGCTTTCCA +
Preference number: 6 (lower is better)
Translates to: GRRREESGLSGV*EFFLRSCLSFP
Trigger: TGGAAAGCTGAGGCAGGATCTGAGGAAGAATTCTCAGACTCCGGAGAGCCCGGACTCCTCTCTTCTCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS TCA 72 bp GGTAATGTCGCAGGCCTGTCCCCCGAAGGCCTGTATTaGGACAAGATGCATAGTGAAAGCCACGGCAATCCA +
Preference number: 6 (lower is better)
Translates to: GNVAGLSPEGLY*DKMHSESHGNP
Trigger: TGGATTGCCGTGGCTTTCACTATGCATCTTGTCTCAATACAGGCCTTCGGGGGACAGGCCTGCGACATTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529019.1
CDS GCA 72 bp GATCCTGCCTCAGCTTTCCAGCCTAGCAGAACCAGATaGCCCCTCCTGCATCCAAAAAGAGCTTTCTTGACG +
Preference number: 6 (lower is better)
Translates to: DPASAFQPSRTR*PLLHPKRAFLT
Trigger: CGTCAAGAAAGCTCTTTTTGGATGCAGGAGGGGGCATCTGGTTCTGCTAGGCTGGAAAGCTGAGGCAGGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS TCA 72 bp GAAAGCCACGGCAATCCATTACGTCCTGCTTCAAGGTaGGTGTGGCAAGAGGAAAACTTTCCCTCCAAAGCC +
Preference number: 6 (lower is better)
Translates to: ESHGNPLRPASR*VWQEENFPSKA
Trigger: GGCTTTGGAGGGAAAGTTTTCCTCTTGCCACACTCACCTTGAAGCAGGACGTAATGGATTGCCGTGGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529019.1
CDS TCA 72 bp GCTGCTACCGCTGCTGCCTTCCTCTGTGCTGAATTCTaGGCAGGTTTAAATCCAATGTTTGCAAAGGGAGGG +
Preference number: 6 (lower is better)
Translates to: AATAAAFLCAEF*AGLNPMFAKGG
Trigger: CCCTCCCTTTGCAAACATTGGATTTAAACCTGCTCAGAATTCAGCACAGAGGAAGGCAGCAGCGGTAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524381.6
CDS CAA 90 bp GCGCTTTCTCTGCCTCTCTCTTCGAGACGCTACTTTAAGATTCAGTaGGGCACGTTCTGCAGAGCTCTGGCATCAAAAGTTTATAACCCA +
Preference number: 6 (lower is better)
Translates to: ALSLPLSSRRYFKIQ*GTFCRALASKVYNP
Trigger: TGGGTTATAAACTTTTGATGCCAGAGCTCTGCAGAACGTGCCCAACTGAATCTTAAAGTAGCGTCTCGAAGAGAGAGGCAGAGAAAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS CAA 90 bp GAGAAGCAGGCGTTGCTCAGAGGACCTAGGATTTCTTATCAAAACTaGATGAAGAAGTGGGCTAAGAGGGTCCCTGATAGCCAGAGACAA +
Preference number: 6 (lower is better)
Translates to: EKQALLRGPRISYQN*MKKWAKRVPDSQRQ
Trigger: TTGTCTCTGGCTATCAGGGACCCTCTTAGCCCACTTCTTCATCAAGTTTTGATAAGAAATCCTAGGTCCTCTGAGCAACGCCTGCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000524381.6
ENST00000529038.5
ENST00000541867.5
ENST00000612177.4
CDS CCA 72 bp TGCCTCTCTCTTCGAGACGCTACTTTAAGATTCAGTTaGGCACGTTCTGCAGAGCTCTGGCATCAAAAGTTT +
Preference number: 6 (lower is better)
Translates to: CLSLRDATLRFS*ARSAELWHQKF
Trigger: AAACTTTTGATGCCAGAGCTCTGCAGAACGTGCCCAACTGAATCTTAAAGTAGCGTCTCGAAGAGAGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331898.11
CDS CAA 72 bp GCGTTGCTCAGAGGACCTAGGATTTCTTATCAAAACTaGATGAAGAAGTGGGCTAAGAGGGTCCCTGATAGC +
Preference number: 6 (lower is better)
Translates to: ALLRGPRISYQN*MKKWAKRVPDS
Trigger: GCTATCAGGGACCCTCTTAGCCCACTTCTTCATCAAGTTTTGATAAGAAATCCTAGGTCCTCTGAGCAACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000524381.6
ENST00000529038.5
ENST00000541867.5
ENST00000612177.4
CDS CAA 72 bp GAAACATTGAAGAAAGTCAGAGTGGACATGCGGCCTTaGTTTTCAATCCTCATTCCATCCAGACCAGTGGCT +
Preference number: 6 (lower is better)
Translates to: ETLKKVRVDMRP*FSILIPSRPVA
Trigger: AGCCACTGGTCTGGATGGAATGAGGATTGAAAACAAAGGCCGCATGTCCACTCTGACTTTCTTCAATGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331898.11
ENST00000374778.4
ENST00000524381.6
ENST00000529038.5
ENST00000541867.5
ENST00000612177.4
CDS GCA 72 bp TCGAGACGCTACTTTAAGATTCAGTTGGGCACGTTCTaGAGAGCTCTGGCATCAAAAGTTTATAACCCAAAG +
Preference number: 6 (lower is better)
Translates to: SRRYFKIQLGTF*RALASKVYNPK
Trigger: CTTTGGGTTATAAACTTTTGATGCCAGAGCTCTGCAGAACGTGCCCAACTGAATCTTAAAGTAGCGTCTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331898.11