Pregenerated sensors for OOSP4B (Homo sapiens)
Ensembl gene IDs: ENSG00000255393, ENSG00000285463Ensembl transcript IDs: ENST00000534388.2, ENST00000642343.1, ENST00000642572.1, ENST00000644647.1, ENST00000645128.1, ENST00000646423.1
Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTGTCCACTGAACATCTGTGTCGCGAAGATCTGCAGCTTCACTCCTaGGCCAGCGAGACCACGAACCCACCAGAAGGAAGAAAACGCCGA | + |
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Preference number: 5 (lower is better) Translates to: LSTEHLCREDLQLHS*ASETTNPPEGRKRR Trigger: TCGGCGTTTTCTTCCTTCTGGTGGGTTCGTGGTCTCGCTGGCTCAGGAGTGAAGCTGCAGATCTTCGCGACACAGATGTTCAGTGGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000642572.1 ENST00000644647.1 |
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| CDS GCA 72 bp | ACCTTTGGCCACATTCAGCTGTCTGCAATTACCCTCTaGTGGGGCAGCCCAGGGAAACCCCTTAGCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: TFGHIQLSAITL*WGSPGKPLSIF Trigger: GAAGATGCTAAGGGGTTTCCCTGGGCTGCCCCAGCAGAGGGTAATTGCAGACAGCTGAATGTGGCCAAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000642343.1 ENST00000642572.1 ENST00000644647.1 ENST00000645128.1 |
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| CDS GCA 72 bp | GCCCATCAGCTGGCAGTAGCTGCAACACTTCACCTGTaGCATAGGCAACCTGGGAGCTCTCATTCTTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: AHQLAVAATLHL*HRQPGSSHSWN Trigger: ATTCCAAGAATGAGAGCTCCCAGGTTGCCTATGGCACAGGTGAAGTGTTGCAGCTACTGCCAGCTGATGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000642572.1 ENST00000644647.1 |
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| CDS GCA 72 bp | CTTCTTTGTCCACTGAACATCTGTGTCGCGAAGATCTaGAGCTTCACTCCTGAGCCAGCGAGACCACGAACC | + |
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Preference number: 6 (lower is better) Translates to: LLCPLNICVAKI*SFTPEPARPRT Trigger: GGTTCGTGGTCTCGCTGGCTCAGGAGTGAAGCTGCAGATCTTCGCGACACAGATGTTCAGTGGACAAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000642572.1 ENST00000644647.1 |
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| CDS CCA 72 bp | TTTGGCCACATTCAGCTGTCTGCAATTACCCTCTGCTaGGGCAGCCCAGGGAAACCCCTTAGCATCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: FGHIQLSAITLC*GSPGKPLSIFS Trigger: TGAGAAGATGCTAAGGGGTTTCCCTGGGCTGCCCCAGCAGAGGGTAATTGCAGACAGCTGAATGTGGCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000642343.1 ENST00000642572.1 ENST00000644647.1 ENST00000645128.1 |
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| CDS CAA 72 bp | CAAGGAGCTGGGGGTTCCTTGAGTGCTTATAAACCTTaGGCCACATTCAGCTGTCTGCAATTACCCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: QGAGGSLSAYKP*ATFSCLQLPSA Trigger: AGCAGAGGGTAATTGCAGACAGCTGAATGTGGCCAAAGGTTTATAAGCACTCAAGGAACCCCCAGCTCCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000642343.1 ENST00000642572.1 ENST00000644647.1 ENST00000645128.1 |
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| CDS CCA 72 bp | AGCACATTGCAGTTATTGCTCATAGCAGCAGGACTATaGTACAATGTCCTTCTTGGTCCATGTCGAAACGGG | + |
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Preference number: 6 (lower is better) Translates to: STLQLLLIAAGL*YNVLLGPCRNG Trigger: CCCGTTTCGACATGGACCAAGAAGGACATTGTACCATAGTCCTGCTGCTATGAGCAATAACTGCAATGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000534388.2 ENST00000646423.1 |
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| CDS CAA 72 bp | ATAGAAAACAAGAAATGGCAAGGAGCTGGGGGTTCCTaGAGTGCTTATAAACCTTTGGCCACATTCAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: IENKKWQGAGGS*SAYKPLATFSC Trigger: ACAGCTGAATGTGGCCAAAGGTTTATAAGCACTCAAGGAACCCCCAGCTCCTTGCCATTTCTTGTTTTCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000642343.1 ENST00000642572.1 ENST00000644647.1 ENST00000645128.1 |
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| CDS CAA 90 bp | AGACACAACATAGAAAACAAGAAATGGCAAGGAGCTGGGGGTTCCTaGAGTGCTTATAAACCTTTGGCCACATTCAGCTGTCTGCAATTA | + |
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Preference number: 6 (lower is better) Translates to: RHNIENKKWQGAGGS*SAYKPLATFSCLQL Trigger: TAATTGCAGACAGCTGAATGTGGCCAAAGGTTTATAAGCACTCAAGGAACCCCCAGCTCCTTGCCATTTCTTGTTTTCTATGTTGTGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000642343.1 ENST00000642572.1 ENST00000644647.1 ENST00000645128.1 |
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