Pregenerated sensors for OOSP3 (Homo sapiens)
Ensembl gene IDs: ENSG00000285231Ensembl transcript IDs: ENST00000646438.1
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | ATGTCCTCTCAGGAAGTGGCACCAAAAAGTGATAAATCTGTAGTGAGTGGTTCACCTTCGCAGTTACATTaGTTACAGGACAGCCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: MSSQEVAPKSDKSVVSGSPSQLH*LQDSQF Trigger: GAACTGGCTGTCCTGTAACCAATGTAACTGCGAAGG...TGAACCACTCACTACAGATTTATCACTTTTTGGTGCCACTTCCTGAGAGGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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| CDS-3UTR CCA 90 bp | TATGAAGCACTGGGCTCTATCCCAACCCAATGTCCTCTCAGGAAGTGGCACCAAGGAGTTTTGAAAATATaGAATCCGAGTCAATCCAAA | + |
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Preference number: 4 (lower is better) Translates to: YEALGSIPTQCPLRKWHQGVLKI*NPSQSK Trigger: TTTGGATTGACTCGGATTCCATATTTTCAAAACTCC...TTGGTGCCACTTCCTGAGAGGACATTGGGTTGGGATAGAGCCCAGTGCTTCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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| CDS-3UTR TCA 90 bp | ATGTCCTCTCAGGAAGTGGCACCAAAAAGTGATAAATCTGTAGTGAGTGGTTCATCTACCGAGGAGTTTTaGAAATATGGAATCCGAGTC | + |
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Preference number: 4 (lower is better) Translates to: MSSQEVAPKSDKSVVSGSSTEEF*KYGIRV Trigger: GACTCGGATTCCATATTTTCAAAACTCCTCGGTAGA...TGAACCACTCACTACAGATTTATCACTTTTTGGTGCCACTTCCTGAGAGGACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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| CDS-3UTR TCA 90 bp | CCAATGTCCTCTCAGGAAGTGGCACCAAAAAGTGATAAATCTGTAGTGAGTGGTCTTTTTAAAAACATATaGAGCACTGGGCTCTATCCC | + |
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Preference number: 4 (lower is better) Translates to: PMSSQEVAPKSDKSVVSGLFKNI*STGLYP Trigger: GGGATAGAGCCCAGTGCTTCATATGTTTTTAAAAAG...ACCACTCACTACAGATTTATCACTTTTTGGTGCCACTTCCTGAGAGGACATTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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| CDS-3UTR GCA 90 bp | AACCCAATGTCCTCTCAGGAAGTGGCACCAAAAAGTGATAAATCTGTAGTGAGTGCCAGTTCCCAGAGATaGTTCATCAGAATGCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: NPMSSQEVAPKSDKSVVSASSQR*FIRMQN Trigger: ATTTTGCATTCTGATGAAGCATCTCTGGGAACTGGC...ACTCACTACAGATTTATCACTTTTTGGTGCCACTTCCTGAGAGGACATTGGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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| CDS-3UTR GCA 90 bp | ATGTCCTCTCAGGAAGTGGCACCAAAAAGTGATAAATCTGTAGTGAGTGGTTCACCAGTGACTCCTTTGTaGATTATATTACAGTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: MSSQEVAPKSDKSVVSGSPVTPL*IILQWS Trigger: ACTCCACTGTAATATAATGCACAAAGGAGTCACTGG...TGAACCACTCACTACAGATTTATCACTTTTTGGTGCCACTTCCTGAGAGGACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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| CDS-3UTR CCA 90 bp | TTTTTAAAAACATATGAAGCACTGGGCTCTATCCCAACCCAATGTCCTCTCAGGTGTCCTCTCAGGAAGTaGCACCAAAAAGTGATAAAT | + |
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Preference number: 4 (lower is better) Translates to: FLKTYEALGSIPTQCPLRCPLRK*HQKVIN Trigger: ATTTATCACTTTTTGGTGCCACTTCCTGAGAGGACA...CCTGAGAGGACATTGGGTTGGGATAGAGCCCAGTGCTTCATATGTTTTTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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| CDS-3UTR TCA 90 bp | TTTTTAAAAACATATGAAGCACTGGGCTCTATCCCAACCCAATGTCCTCTCAGGAAGGAATTTTGCCAGTaGCTCCTTTGTGCATTATAT | + |
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Preference number: 4 (lower is better) Translates to: FLKTYEALGSIPTQCPLRKEFCQ*LLCALY Trigger: ATATAATGCACAAAGGAGTCACTGGCAAAATTCCTT...CCTGAGAGGACATTGGGTTGGGATAGAGCCCAGTGCTTCATATGTTTTTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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| CDS-3UTR CCA 90 bp | ATGTCCTCTCAGGAAGTGGCACCAAAAAGTGATAAATCTGTAGTGAGTGGTTCATTTTCAGGATTGCCATaGAAGAACCTAGAATATAGC | + |
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Preference number: 4 (lower is better) Translates to: MSSQEVAPKSDKSVVSGSFSGLP*KNLEYS Trigger: GCTATATTCTAGGTTCTTCCATGGCAATCCTGAAAA...TGAACCACTCACTACAGATTTATCACTTTTTGGTGCCACTTCCTGAGAGGACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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| CDS-3UTR CCA 90 bp | CAGGAAGTGGCACCAAAAAGTGATAAATCTGTAGTGAGTGGTTCAAAAATTAAAAAACATATGAAGCACTaGGCTCTATCCCAACCCAAT | + |
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Preference number: 4 (lower is better) Translates to: QEVAPKSDKSVVSGSKIKKHMKH*ALSQPN Trigger: ATTGGGTTGGGATAGAGCCCAGTGCTTCATATGTTT...TTTAATTTTTGAACCACTCACTACAGATTTATCACTTTTTGGTGCCACTTCCTG 38% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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| CDS-3UTR TCA 90 bp | CAGGAAGTGGCACCAAAAAGTGATAAATCTGTAGTGAGTGGTTCAAAAATTAAAAGTGGTATCCAAAGATaGGCCATATACAATACACAT | + |
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Preference number: 4 (lower is better) Translates to: QEVAPKSDKSVVSGSKIKSGIQR*AIYNTH Trigger: ATGTGTATTGTATATGGCTCATCTTTGGATACCACT...TTTAATTTTTGAACCACTCACTACAGATTTATCACTTTTTGGTGCCACTTCCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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| CDS-3UTR CAA 90 bp | CCAATGTCCTCTCAGGAAGTGGCACCAAAAAGTGATAAATCTGTAGTGAGTGGTCCCTTCGCAGTTACATaGGTTACAGGACAGCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: PMSSQEVAPKSDKSVVSGPFAVT*VTGQPV Trigger: AACTGGCTGTCCTGTAACCAATGTAACTGCGAAGGG...ACCACTCACTACAGATTTATCACTTTTTGGTGCCACTTCCTGAGAGGACATTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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| CDS-3UTR CAA 90 bp | TTTTTAAAAACATATGAAGCACTGGGCTCTATCCCAACCCAATGTCCTCTCAGGCTTGACCAAGTAAAGTaGGTTCAGCCACAACCCAGA | + |
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Preference number: 5 (lower is better) Translates to: FLKTYEALGSIPTQCPLRLDQVK*VQPQPR Trigger: TCTGGGTTGTGGCTGAACCAACTTTACTTGGTCAAG...CCTGAGAGGACATTGGGTTGGGATAGAGCCCAGTGCTTCATATGTTTTTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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| CDS-3UTR CAA 90 bp | ATGTCCTCTCAGGAAGTGGCACCAAAAAGTGATAAATCTGTAGTGAGTGGTTCACCAAATAAGCTAGCGTaGGTTAAGTTCCAGGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: MSSQEVAPKSDKSVVSGSPNKLA*VKFQGE Trigger: TTCTCCCTGGAACTTAACCAACGCTAGCTTATTTGG...TGAACCACTCACTACAGATTTATCACTTTTTGGTGCCACTTCCTGAGAGGACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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| CDS-3UTR CAA 90 bp | CCAATGTCCTCTCAGGAAGTGGCACCAAAAAGTGATAAATCTGTAGTGAGTGGTCTCTACCGAGGAGTTTaGAAAATATGGAATCCGAGT | + |
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Preference number: 5 (lower is better) Translates to: PMSSQEVAPKSDKSVVSGLYRGV*KIWNPS Trigger: ACTCGGATTCCATATTTTCAAAACTCCTCGGTAGAG...ACCACTCACTACAGATTTATCACTTTTTGGTGCCACTTCCTGAGAGGACATTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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| CDS-3UTR CAA 90 bp | AACCCAATGTCCTCTCAGGAAGTGGCACCAAAAAGTGATAAATCTGTAGTGAGTAGCGGGAGGGTCATTTaGGAATTCTGTAAGATTGTT | + |
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Preference number: 5 (lower is better) Translates to: NPMSSQEVAPKSDKSVVSSGRVI*EFCKIV Trigger: AACAATCTTACAGAATTCCAAAATGACCCTCCCGCT...ACTCACTACAGATTTATCACTTTTTGGTGCCACTTCCTGAGAGGACATTGGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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| CDS-3UTR CAA 90 bp | TCTCAGGAAGTGGCACCAAAAAGTGATAAATCTGTAGTGAGTGGTTCAAAAATTCACATCAAAGGAATTTaGCCAGTGACTCCTTTGTGC | + |
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Preference number: 5 (lower is better) Translates to: SQEVAPKSDKSVVSGSKIHIKGI*PVTPLC Trigger: GCACAAAGGAGTCACTGGCAAAATTCCTTTGATGTG...AATTTTTGAACCACTCACTACAGATTTATCACTTTTTGGTGCCACTTCCTGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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| CDS CCA 90 bp | GAATTGGTAGCGGGAGGGTCATTTTGGAATTCTGTAAGATTGTTATaGATAGTGCTTGAAGTGGTATCCAAAGATGAGCCATATACAATA | + |
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Preference number: 5 (lower is better) Translates to: ELVAGGSFWNSVRLL*IVLEVVSKDEPYTI Trigger: TATTGTATATGGCTCATCTTTGGATACCACTTCAAGCACTATCCATAACAATCTTACAGAATTCCAAAATGACCCTCCCGCTACCAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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| CDS CAA 90 bp | GTGGTATCCAAAGATGAGCCATATACAATACACATCAAAGGAATTTaGCCAGTGACTCCTTTGTGCATTATATTACAGTGGAGTGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: VVSKDEPYTIHIKGI*PVTPLCIILQWSAE Trigger: TTCAGCACTCCACTGTAATATAATGCACAAAGGAGTCACTGGCAAAATTCCTTTGATGTGTATTGTATATGGCTCATCTTTGGATACCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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| CDS TCA 72 bp | AGCCATATACAATACACATCAAAGGAATTTTGCCAGTaGCTCCTTTGTGCATTATATTACAGTGGAGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SHIQYTSKEFCQ*LLCALYYSGVL Trigger: CAGCACTCCACTGTAATATAATGCACAAAGGAGTCACTGGCAAAATTCCTTTGATGTGTATTGTATATGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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| CDS CAA 72 bp | AAAGATGAGCCATATACAATACACATCAAAGGAATTTaGCCAGTGACTCCTTTGTGCATTATATTACAGTGG | + |
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Preference number: 6 (lower is better) Translates to: KDEPYTIHIKGI*PVTPLCIILQW Trigger: CCACTGTAATATAATGCACAAAGGAGTCACTGGCAAAATTCCTTTGATGTGTATTGTATATGGCTCATCTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646438.1 |
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