Pregenerated sensors for OOEP (Homo sapiens)
Ensembl gene IDs: ENSG00000203907Ensembl transcript IDs: ENST00000370359.6, ENST00000370363.5, ENST00000441145.1
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTTTGCCCCGCTGGGACTCAGCGGCACCAGCATCATCGACCATACTaGGACCAGCAGCCGCGGAGCGCGCTCGAGGCGGCTTTCGCAAGA | + |
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Preference number: 5 (lower is better) Translates to: VCPAGTQRHQHHRPY*DQQPRSALEAAFAR Trigger: TCTTGCGAAAGCCGCCTCGAGCGCGCTCCGCGGCTGCTGGTCCCAGTATGGTCGATGATGCTGGTGCCGCTGAGTCCCAGCGGGGCAAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370359.6 |
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| CDS CCA 90 bp | CTACGCAGCTGCTCCAGGGAGTGGGCCGGAGTCTGTTTGCCCCGCTaGGACTCAGCGGCACCAGCATCATCGACCATACTGGGACCAGCA | + |
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Preference number: 5 (lower is better) Translates to: LRSCSREWAGVCLPR*DSAAPASSTILGPA Trigger: TGCTGGTCCCAGTATGGTCGATGATGCTGGTGCCGCTGAGTCCCAGCGGGGCAAACAGACTCCGGCCCACTCCCTGGAGCAGCTGCGTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370359.6 |
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| CDS GCA 90 bp | CTAAAACTGGGAAAGTCCCGCCCACAACGCTCACTGGCCAATGGCTaGGTGAAATCAGTGCGAAGTGGGCGGGATAGAGAGCGTGGGCGG | + |
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Preference number: 5 (lower is better) Translates to: LKLGKSRPQRSLANG*VKSVRSGRDRERGR Trigger: CCGCCCACGCTCTCTATCCCGCCCACTTCGCACTGATTTCACGCAGCCATTGGCCAGTGAGCGTTGTGGGCGGGACTTTCCCAGTTTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441145.1 |
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| CDS GCA 90 bp | GAGGCTGGAAGATCACTTGAAGCCAGAAGCCAAGAGTTCAAGACCTaGCTGGGCAACACGGCGACACCCCGTCTTGGCCAATGGCTGCGT | + |
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Preference number: 5 (lower is better) Translates to: EAGRSLEARSQEFKT*LGNTATPRLGQWLR Trigger: ACGCAGCCATTGGCCAAGACGGGGTGTCGCCGTGTTGCCCAGGCAGGTCTTGAACTCTTGGCTTCTGGCTTCAAGTGATCTTCCAGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370363.5 |
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| CDS CCA 90 bp | ACATCGACTACTTCAAGGCACACTCCCACGGTTCAGAAAACCGATTaGCTAAAACTGGGAAAGTCCCGCCCACAACGCTCACTGGCCAAT | + |
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Preference number: 5 (lower is better) Translates to: TSTTSRHTPTVQKTD*LKLGKSRPQRSLAN Trigger: ATTGGCCAGTGAGCGTTGTGGGCGGGACTTTCCCAGTTTTAGCCAATCGGTTTTCTGAACCGTGGGAGTGTGCCTTGAAGTAGTCGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441145.1 |
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| CDS CCA 72 bp | GCTGGGACTCAGCGGCACCAGCATCATCGACCATACTaGGACCAGCAGCCGCGGAGCGCGCTCGAGGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: AGTQRHQHHRPY*DQQPRSALEAA Trigger: AGCCGCCTCGAGCGCGCTCCGCGGCTGCTGGTCCCAGTATGGTCGATGATGCTGGTGCCGCTGAGTCCCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370359.6 |
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| CDS CAA 72 bp | CTACGCAGCTGCTCCAGGGAGTGGGCCGGAGTCTGTTaGCCCCGCTGGGACTCAGCGGCACCAGCATCATCG | + |
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Preference number: 6 (lower is better) Translates to: LRSCSREWAGVC*PRWDSAAPASS Trigger: CGATGATGCTGGTGCCGCTGAGTCCCAGCGGGGCAAACAGACTCCGGCCCACTCCCTGGAGCAGCTGCGTAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370359.6 |
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| CDS GCA 72 bp | TACGCAGCTGCTCCAGGGAGTGGGCCGGAGTCTGTTTaGCCCGCTGGGACTCAGCGGCACCAGCATCATCGA | + |
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Preference number: 6 (lower is better) Translates to: YAAAPGSGPESV*PAGTQRHQHHR Trigger: TCGATGATGCTGGTGCCGCTGAGTCCCAGCGGGGCAAACAGACTCCGGCCCACTCCCTGGAGCAGCTGCGTA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370359.6 |
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| CDS CCA 72 bp | TGCTCCAGGGAGTGGGCCGGAGTCTGTTTGCCCCGCTaGGACTCAGCGGCACCAGCATCATCGACCATACTG | + |
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Preference number: 6 (lower is better) Translates to: CSREWAGVCLPR*DSAAPASSTIL Trigger: CAGTATGGTCGATGATGCTGGTGCCGCTGAGTCCCAGCGGGGCAAACAGACTCCGGCCCACTCCCTGGAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370359.6 |
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| CDS TCA 72 bp | CAACACGGCGACACCCCGTCTTGGCCAATGGCTGCGTaGAATCAGTGCGAAGTGGGCGGGATAGAGAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: QHGDTPSWPMAA*NQCEVGGIESV Trigger: CACGCTCTCTATCCCGCCCACTTCGCACTGATTTCACGCAGCCATTGGCCAAGACGGGGTGTCGCCGTGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370363.5 |
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| CDS TCA 72 bp | AGTCCCGCCCACAACGCTCACTGGCCAATGGCTGCGTaGAATCAGTGCGAAGTGGGCGGGATAGAGAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: SPAHNAHWPMAA*NQCEVGGIESV Trigger: CACGCTCTCTATCCCGCCCACTTCGCACTGATTTCACGCAGCCATTGGCCAGTGAGCGTTGTGGGCGGGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441145.1 |
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| CDS GCA 72 bp | TGGGCAACACGGCGACACCCCGTCTTGGCCAATGGCTaGGTGAAATCAGTGCGAAGTGGGCGGGATAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: WATRRHPVLANG*VKSVRSGRDRE Trigger: CTCTCTATCCCGCCCACTTCGCACTGATTTCACGCAGCCATTGGCCAAGACGGGGTGTCGCCGTGTTGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370363.5 |
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| CDS GCA 72 bp | GGAAAGTCCCGCCCACAACGCTCACTGGCCAATGGCTaGGTGAAATCAGTGCGAAGTGGGCGGGATAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: GKSRPQRSLANG*VKSVRSGRDRE Trigger: CTCTCTATCCCGCCCACTTCGCACTGATTTCACGCAGCCATTGGCCAGTGAGCGTTGTGGGCGGGACTTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441145.1 |
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| CDS GCA 72 bp | AGATCACTTGAAGCCAGAAGCCAAGAGTTCAAGACCTaGCTGGGCAACACGGCGACACCCCGTCTTGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: RSLEARSQEFKT*LGNTATPRLGQ Trigger: TTGGCCAAGACGGGGTGTCGCCGTGTTGCCCAGGCAGGTCTTGAACTCTTGGCTTCTGGCTTCAAGTGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370363.5 |
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| CDS CCA 72 bp | ACCCGAGGTGTGTGTCCAGTAGGGGAGGGAGCAAATTaGGCGTTTGGAAAAAGTCCCACGCCTGGAAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: TRGVCPVGEGAN*AFGKSPTPGKE Trigger: TTCCTTTCCAGGCGTGGGACTTTTTCCAAACGCCCAATTTGCTCCCTCCCCTACTGGACACACACCTCGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441145.1 |
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| CDS CAA 72 bp | AACCCGAGGTGTGTGTCCAGTAGGGGAGGGAGCAAATaGGGCGTTTGGAAAAAGTCCCACGCCTGGAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: NPRCVSSRGGSK*GVWKKSHAWKG Trigger: TCCTTTCCAGGCGTGGGACTTTTTCCAAACGCCCAATTTGCTCCCTCCCCTACTGGACACACACCTCGGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441145.1 |
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| CDS CAA 90 bp | CACATCGACTACTTCAAGGCACACTCCCACGGTTCAGAAAACCGATaGGCTAAAACTGGGAAAGTCCCGCCCACAACGCTCACTGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: HIDYFKAHSHGSENR*AKTGKVPPTTLTGQ Trigger: TTGGCCAGTGAGCGTTGTGGGCGGGACTTTCCCAGTTTTAGCCAATCGGTTTTCTGAACCGTGGGAGTGTGCCTTGAAGTAGTCGATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441145.1 |
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| CDS GCA 72 bp | AGATCACTTGAAGCCAGAAGCCAAGAGTTCAAGACCTaGCTGGGCAACACGGCGACACCCCGTCTCTATTTA | + |
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Preference number: 6 (lower is better) Translates to: RSLEARSQEFKT*LGNTATPRLYL Trigger: TAAATAGAGACGGGGTGTCGCCGTGTTGCCCAGGCAGGTCTTGAACTCTTGGCTTCTGGCTTCAAGTGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441145.1 |
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| CDS CCA 72 bp | ACTTCAAGGCACACTCCCACGGTTCAGAAAACCGATTaGCTAAAACTGGGAAAGTCCCGCCCACAACGCTCA | + |
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Preference number: 6 (lower is better) Translates to: TSRHTPTVQKTD*LKLGKSRPQRS Trigger: TGAGCGTTGTGGGCGGGACTTTCCCAGTTTTAGCCAATCGGTTTTCTGAACCGTGGGAGTGTGCCTTGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441145.1 |
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| CDS CAA 72 bp | TACTTCAAGGCACACTCCCACGGTTCAGAAAACCGATaGGCTAAAACTGGGAAAGTCCCGCCCACAACGCTC | + |
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Preference number: 6 (lower is better) Translates to: YFKAHSHGSENR*AKTGKVPPTTL Trigger: GAGCGTTGTGGGCGGGACTTTCCCAGTTTTAGCCAATCGGTTTTCTGAACCGTGGGAGTGTGCCTTGAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441145.1 |
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| CDS CCA 72 bp | TGTGTGTCCAGTAGGGGAGGGAGCAAATTGGGCGTTTaGAAAAAGTCCCACGCCTGGAAAGGAATACACAGT | + |
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Preference number: 6 (lower is better) Translates to: CVSSRGGSKLGV*KKSHAWKGIHS Trigger: ACTGTGTATTCCTTTCCAGGCGTGGGACTTTTTCCAAACGCCCAATTTGCTCCCTCCCCTACTGGACACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441145.1 |
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| CDS CAA 72 bp | GAATTATGGCTCGGTCTGGGCCTTTATGGGTCACGGTaGAAAACATTTCCGGTGCAGTGGCTGACTGTAATC | + |
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Preference number: 6 (lower is better) Translates to: ELWLGLGLYGSR*KTFPVQWLTVI Trigger: GATTACAGTCAGCCACTGCACCGGAAATGTTTTCAACCGTGACCCATAAAGGCCCAGACCGAGCCATAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370363.5 ENST00000441145.1 |
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