RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ONECUT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000169856

Ensembl transcript IDs: ENST00000305901.7, ENST00000560699.2, ENST00000561401.3, ENST00000570208.2

Found 422 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGACGAGGAGCAGCCCCTTCGCCCACTCCCTCCGGAACCTCAGTTaGTCGCGGGCAGCCCACGGGTGGAGATATGGTGCCGGTAGCACA +
Preference number: 1 (lower is better)
Translates to: RTRSSPFAHSLRNLS*SRAAHGWRYGAGST
Trigger: TGTGCTACCGGCACCATATCTCCACCCGTGGGCTGCCCGCGAGCAACTGAGGTTCCGGAGGGAGTGGGCGAAGGGGCTGCTCCTCGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR CCA 90 bp GCCCACTCCCTCCGGAACCTCAGTTGCTCGCGGGCAGCCCACGGGTaGAGATATGGTGCCGGTAGCACAAGAGCCTCAAGGGTCGCCGAA +
Preference number: 1 (lower is better)
Translates to: AHSLRNLSCSRAAHG*RYGAGSTRASRVAE
Trigger: TTCGGCGACCCTTGAGGCTCTTGTGCTACCGGCACCATATCTCCACCCGTGGGCTGCCCGCGAGCAACTGAGGTTCCGGAGGGAGTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR GCA 90 bp CTCCGGCACGCTCCAGCCCAGCGCCTGGGATGTGTCAGAGGTACCTaGGAGGAACATTTGCGTGCGATTCCACGCACGCGTTGCATCCCT +
Preference number: 1 (lower is better)
Translates to: LRHAPAQRLGCVRGT*EEHLRAIPRTRCIP
Trigger: AGGGATGCAACGCGTGCGTGGAATCGCACGCAAATGTTCCTCGCAGGTACCTCTGACACATCCCAGGCGCTGGGCTGGAGCGTGCCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR CCA 90 bp CACGTGCAAGAGGGTTTTGACCCTCTGCAACAGGCTGCCGGCAACTaGAGGACAGAGGGGCGTGGAGAAGCCACCACTCTCCCGCTTGGG +
Preference number: 1 (lower is better)
Translates to: HVQEGFDPLQQAAGN*RTEGRGEATTLPLG
Trigger: CCCAAGCGGGAGAGTGGTGGCTTCTCCACGCCCCTCTGTCCTCCAGTTGCCGGCAGCCTGTTGCAGAGGGTCAAAACCCTCTTGCACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR CCA 90 bp TCGGCCAAACATCGACGCTGCTCCGGCACGCTCCAGCCCAGCGCCTaGGATGTGTCAGAGGTACCTGCGAGGAACATTTGCGTGCGATTC +
Preference number: 1 (lower is better)
Translates to: SAKHRRCSGTLQPSA*DVSEVPARNICVRF
Trigger: GAATCGCACGCAAATGTTCCTCGCAGGTACCTCTGACACATCCCAGGCGCTGGGCTGGAGCGTGCCGGAGCAGCGTCGATGTTTGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR TCA 90 bp CCACGCACGCGTTGCATCCCTCTTCCCAAACCCGGATCGCTGAACTaGGAGGTGGCGCAGAGTGTCTCACCAGGTGCGGGGATTTCTCTC +
Preference number: 1 (lower is better)
Translates to: PRTRCIPLPKPGSLN*EVAQSVSPGAGISL
Trigger: GAGAGAAATCCCCGCACCTGGTGAGACACTCTGCGCCACCTCTCAGTTCAGCGATCCGGGTTTGGGAAGAGGGATGCAACGCGTGCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR GCA 90 bp CAGCCCAGCGCCTGGGATGTGTCAGAGGTACCTGCGAGGAACATTTaGGTGCGATTCCACGCACGCGTTGCATCCCTCTTCCCAAACCCG +
Preference number: 1 (lower is better)
Translates to: QPSAWDVSEVPARNI*VRFHARVASLFPNP
Trigger: CGGGTTTGGGAAGAGGGATGCAACGCGTGCGTGGAATCGCACGCAAATGTTCCTCGCAGGTACCTCTGACACATCCCAGGCGCTGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR TCA 90 bp CGATTCCACGCACGCGTTGCATCCCTCTTCCCAAACCCGGATCGCTaGACTGAGAGGTGGCGCAGAGTGTCTCACCAGGTGCGGGGATTT +
Preference number: 1 (lower is better)
Translates to: RFHARVASLFPNPDR*TERWRRVSHQVRGF
Trigger: AAATCCCCGCACCTGGTGAGACACTCTGCGCCACCTCTCAGTTCAGCGATCCGGGTTTGGGAAGAGGGATGCAACGCGTGCGTGGAATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR TCA 90 bp TATGGTGCCGGTAGCACAAGAGCCTCAAGGGTCGCCGAATCCTCCTaGAATCCCCGGTGGGGTTCGGGCTGGGCTCAGCTTTCTTCTCTG +
Preference number: 1 (lower is better)
Translates to: YGAGSTRASRVAESS*NPRWGSGWAQLSSL
Trigger: CAGAGAAGAAAGCTGAGCCCAGCCCGAACCCCACCGGGGATTTCAGGAGGATTCGGCGACCCTTGAGGCTCTTGTGCTACCGGCACCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR GCA 90 bp CCAGCGCCTGGGATGTGTCAGAGGTACCTGCGAGGAACATTTGCGTaGGATTCCACGCACGCGTTGCATCCCTCTTCCCAAACCCGGATC +
Preference number: 1 (lower is better)
Translates to: PAPGMCQRYLRGTFA*DSTHALHPSSQTRI
Trigger: GATCCGGGTTTGGGAAGAGGGATGCAACGCGTGCGTGGAATCGCACGCAAATGTTCCTCGCAGGTACCTCTGACACATCCCAGGCGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR GCA 90 bp TGTTATTTCGTGACCGGAAGGCGCCTCCCCAAACACAGCGCCACGTaGAAGAGGGTTTTGACCCTCTGCAACAGGCTGCCGGCAACTGGA +
Preference number: 1 (lower is better)
Translates to: CYFVTGRRLPKHSAT*KRVLTLCNRLPATG
Trigger: TCCAGTTGCCGGCAGCCTGTTGCAGAGGGTCAAAACCCTCTTGCACGTGGCGCTGTGTTTGGGGAGGCGCCTTCCGGTCACGAAATAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR CCA 90 bp TGCGCCAAGGAGAGCTTCCAGCTGAACTCAGAAACACCTGGGGCTTaGGGTTTCGGGCAGGAGACCTCTGCTCCTAGACTTGGGGGTCAT +
Preference number: 1 (lower is better)
Translates to: CAKESFQLNSETPGA*GFGQETSAPRLGGH
Trigger: ATGACCCCCAAGTCTAGGAGCAGAGGTCTCCTGCCCGAAACCCCAAGCCCCAGGTGTTTCTGAGTTCAGCTGGAAGCTCTCCTTGGCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR GCA 90 bp TGGTACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTaGCCTCGTCCTGCCACTTGTCCAGACTCCTCCTTCTTGCGTTCA +
Preference number: 1 (lower is better)
Translates to: WYKCLMKKMSCLNWS*PRPATCPDSSFLRS
Trigger: TGAACGCAAGAAGGAGGAGTCTGGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTACCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
3UTR CCA 90 bp ATGCTTTGGTACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTaGAGCTGCCCTCGTCCTGCCACTTGTCCAGACTCCTCCTTCTTG +
Preference number: 1 (lower is better)
Translates to: MLWYKCLMKKMSCLN*SCPRPATCPDSSFL
Trigger: CAAGAAGGAGGAGTCTGGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTACCAAAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
3UTR TCA 90 bp CTCCAAACCACTAAACAGCCAAGCACAGCGAGGATGGTCATGGATTaGAGGTGTGAGATCCAGTGGTGTTTTCCTGCTCATCATTTGTCT +
Preference number: 1 (lower is better)
Translates to: LQTTKQPSTARMVMD*RCEIQWCFPAHHLS
Trigger: AGACAAATGATGAGCAGGAAAACACCACTGGATCTCACACCTTCAATCCATGACCATCCTCGCTGTGCTTGGCTGTTTAGTGGTTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR CCA 90 bp CTATGCTCCAAACCACTAAACAGCCAAGCACAGCGAGGATGGTCATaGATTGAAGGTGTGAGATCCAGTGGTGTTTTCCTGCTCATCATT +
Preference number: 1 (lower is better)
Translates to: LCSKPLNSQAQRGWS*IEGVRSSGVFLLII
Trigger: AATGATGAGCAGGAAAACACCACTGGATCTCACACCTTCAATCCATGACCATCCTCGCTGTGCTTGGCTGTTTAGTGGTTTGGAGCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR CCA 90 bp AAATCACTATGCTCCAAACCACTAAACAGCCAAGCACAGCGAGGATaGTCATGGATTGAAGGTGTGAGATCCAGTGGTGTTTTCCTGCTC +
Preference number: 1 (lower is better)
Translates to: KSLCSKPLNSQAQRG*SWIEGVRSSGVFLL
Trigger: GAGCAGGAAAACACCACTGGATCTCACACCTTCAATCCATGACCATCCTCGCTGTGCTTGGCTGTTTAGTGGTTTGGAGCATAGTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR GCA 90 bp AGGAGTGTGCCATCTGGATGTACACGTGTACTGCATCGACCTCTCTaGCATGATATTAATTGCTTCCCTGAAGCTACATTCTTTCTTGCC +
Preference number: 1 (lower is better)
Translates to: RSVPSGCTRVLHRPL*HDINCFPEATFFLA
Trigger: GGCAAGAAAGAATGTAGCTTCAGGGAAGCAATTAATATCATGGCAGAGAGGTCGATGCAGTACACGTGTACATCCAGATGGCACACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR GCA 90 bp AAGTTCGATCTTAAAAGATGTCCGCTCAATGGCTCAAAATCACTATaGTCCAAACCACTAAACAGCCAAGCACAGCGAGGATGGTCATGG +
Preference number: 1 (lower is better)
Translates to: KFDLKRCPLNGSKSL*SKPLNSQAQRGWSW
Trigger: CCATGACCATCCTCGCTGTGCTTGGCTGTTTAGTGGTTTGGAGCATAGTGATTTTGAGCCATTGAGCGGACATCTTTTAAGATCGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR GCA 90 bp GAGACACAGATAGATGGCTTGTTGGTTTTGCTTTACCTCTCTAGTTaGCTGCCTGTTACAGACCTAGACAAGGTGCTGAGATTTGATGCT +
Preference number: 1 (lower is better)
Translates to: ETQIDGLLVLLYLSS*LPVTDLDKVLRFDA
Trigger: AGCATCAAATCTCAGCACCTTGTCTAGGTCTGTAACAGGCAGGCAACTAGAGAGGTAAAGCAAAACCAACAAGCCATCTATCTGTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR CCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTaGTTGCACTCCTATAGAACAACCATTTCTGAAGACCAGCTCTGC +
Preference number: 1 (lower is better)
Translates to: NHTPNPMNSDNPIPC*LHSYRTTISEDQLC
Trigger: GCAGAGCTGGTCTTCAGAAATGGTTGTTCTATAGGAGTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR TCA 90 bp ATGGAACCATGTCTATCTCTCTACTTAAGTGACATTTATGGATCCTaGAAAGGAGTGTGCCATCTGGATGTACACGTGTACTGCATCGAC +
Preference number: 1 (lower is better)
Translates to: MEPCLSLYLSDIYGS*KGVCHLDVHVYCID
Trigger: GTCGATGCAGTACACGTGTACATCCAGATGGCACACTCCTTTTCAGGATCCATAAATGTCACTTAAGTAGAGAGATAGACATGGTTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR GCA 90 bp GGATGTACACGTGTACTGCATCGACCTCTCTGCCATGATATTAATTaGTTCCCTGAAGCTACATTCTTTCTTGCCAGTTCTGAAAACTCA +
Preference number: 1 (lower is better)
Translates to: GCTRVLHRPLCHDIN*FPEATFFLASSENS
Trigger: TGAGTTTTCAGAACTGGCAAGAAAGAATGTAGCTTCAGGGAAGCAATTAATATCATGGCAGAGAGGTCGATGCAGTACACGTGTACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR TCA 90 bp CCTAATGGCATAAGGGGCATCCACTTAGATAAGTTACAGTCCAACTaGATTCAGAGAGAATTTTTCTGGGAATCAAGTGATTCACTGGGG +
Preference number: 1 (lower is better)
Translates to: PNGIRGIHLDKLQSN*IQREFFWESSDSLG
Trigger: CCCCAGTGAATCACTTGATTCCCAGAAAAATTCTCTCTGAATTCAGTTGGACTGTAACTTATCTAAGTGGATGCCCCTTATGCCATTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR TCA 90 bp CAGCTAGGAACAGATTATGGAACCATGTCTATCTCTCTACTTAAGTaGCATTTATGGATCCTGAAAAGGAGTGTGCCATCTGGATGTACA +
Preference number: 1 (lower is better)
Translates to: QLGTDYGTMSISLLK*HLWILKRSVPSGCT
Trigger: TGTACATCCAGATGGCACACTCCTTTTCAGGATCCATAAATGTCACTTAAGTAGAGAGATAGACATGGTTCCATAATCTGTTCCTAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR TCA 90 bp AGTTCCACCAATTCCACCATTTCTCAGTTGCACCTGCTGTTTTGTTaGCGTCCAAGTCATAAAATTTCTGGGATTGGCAATAAGTTAATT +
Preference number: 1 (lower is better)
Translates to: SSTNSTISQLHLLFC*RPSHKISGIGNKLI
Trigger: AATTAACTTATTGCCAATCCCAGAAATTTTATGACTTGGACGTCAACAAAACAGCAGGTGCAACTGAGAAATGGTGGAATTGGTGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR TCA 90 bp GAAAGAAGGCAGAATGCTTTGGAGGCTATTCTTAGTTCCATAAATTaGTTAATACCAATAGATCAAAAGTCTTGTCGTCCACCAGAACAC +
Preference number: 1 (lower is better)
Translates to: ERRQNALEAILSSIN*LIPIDQKSCRPPEH
Trigger: GTGTTCTGGTGGACGACAAGACTTTTGATCTATTGGTATTAATCAATTTATGGAACTAAGAATAGCCTCCAAAGCATTCTGCCTTCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR-3UTR TCA 90 bp TTCGCCCACTCCCTCCGGAACCTCAGTTGCTCGCGGGCAGCCCACGGGTGGAGACCAAACCCGGATCGCTaGACTGAGAGGTGGCGCAGA +
Preference number: 2 (lower is better)
Translates to: FAHSLRNLSCSRAAHGWRPNPDR*TERWRR
Trigger: TCTGCGCCACCTCTCAGTTCAGCGATCCGGGTTTGG...TCTCCACCCGTGGGCTGCCCGCGAGCAACTGAGGTTCCGGAGGGAGTGGGCGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR CAA 90 bp ACCGGAAGGCGCCTCCCCAAACACAGCGCCACGTGCAAGAGGGTTTaGACCCTCTGCAACAGGCTGCCGGCAACTGGAGGACAGAGGGGC +
Preference number: 2 (lower is better)
Translates to: TGRRLPKHSATCKRV*TLCNRLPATGGQRG
Trigger: GCCCCTCTGTCCTCCAGTTGCCGGCAGCCTGTTGCAGAGGGTCAAAACCCTCTTGCACGTGGCGCTGTGTTTGGGGAGGCGCCTTCCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR-3UTR TCA 90 bp TGGAGGACAGAGGGGCGTGGAGAAGCCACCACTCTCCCGCTTGGGCTCTGGAGAGTCGCCGAATCCTCCTaGAATCCCCGGTGGGGTTCG +
Preference number: 2 (lower is better)
Translates to: WRTEGRGEATTLPLGLWRVAESS*NPRWGS
Trigger: CGAACCCCACCGGGGATTTCAGGAGGATTCGGCGAC...TCTCCAGAGCCCAAGCGGGAGAGTGGTGGCTTCTCCACGCCCCTCTGTCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR-3UTR GCA 90 bp CCAGTTCGGCCAAACATCGACGCTGCTCCGGCACGCTCCAGCCCAGCGCCTGGGATTCCACGCACGCGTTaGATCCCTCTTCCCAAACCC +
Preference number: 2 (lower is better)
Translates to: PVRPNIDAAPARSSPAPGIPRTR*IPLPKP
Trigger: GGGTTTGGGAAGAGGGATGCAACGCGTGCGTGGAAT...CCCAGGCGCTGGGCTGGAGCGTGCCGGAGCAGCGTCGATGTTTGGCCGAACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR-3UTR GCA 90 bp GCGCCTCCCCAAACACAGCGCCACGTGCAAGAGGGTTTTGACCCTCTGCAACAGGCCAAACATCGACGCTaGTCCGGCACGCTCCAGCCC +
Preference number: 2 (lower is better)
Translates to: APPQTQRHVQEGFDPLQQAKHRR*SGTLQP
Trigger: GGGCTGGAGCGTGCCGGAGCAGCGTCGATGTTTGGC...CTGTTGCAGAGGGTCAAAACCCTCTTGCACGTGGCGCTGTGTTTGGGGAGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR-3UTR CCA 90 bp TGGAGGACAGAGGGGCGTGGAGAAGCCACCACTCTCCCGCTTGGGCTCTGGAGAGAAACACCTGGGGCTTaGGGTTTCGGGCAGGAGACC +
Preference number: 2 (lower is better)
Translates to: WRTEGRGEATTLPLGLWRETPGA*GFGQET
Trigger: GGTCTCCTGCCCGAAACCCCAAGCCCCAGGTGTTTC...TCTCCAGAGCCCAAGCGGGAGAGTGGTGGCTTCTCCACGCCCCTCTGTCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR-3UTR CCA 90 bp TCAGTTGCTCGCGGGCAGCCCACGGGTGGAGATATGGTGCCGGTAGCACAAGAGCGGTGGGGTTCGGGCTaGGCTCAGCTTTCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: SVARGQPTGGDMVPVAQERWGSG*AQLSSL
Trigger: CAGAGAAGAAAGCTGAGCCCAGCCCGAACCCCACCG...CTCTTGTGCTACCGGCACCATATCTCCACCCGTGGGCTGCCCGCGAGCAACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR CAA 90 bp CCAGCCCAGCGCCTGGGATGTGTCAGAGGTACCTGCGAGGAACATTaGCGTGCGATTCCACGCACGCGTTGCATCCCTCTTCCCAAACCC +
Preference number: 2 (lower is better)
Translates to: PAQRLGCVRGTCEEH*RAIPRTRCIPLPKP
Trigger: GGGTTTGGGAAGAGGGATGCAACGCGTGCGTGGAATCGCACGCAAATGTTCCTCGCAGGTACCTCTGACACATCCCAGGCGCTGGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR-3UTR TCA 90 bp TTCGCCCACTCCCTCCGGAACCTCAGTTGCTCGCGGGCAGCCCACGGGTGGAGAACCGCCCAATGGCTCTaGAACTTTTTGCCCATACTC +
Preference number: 2 (lower is better)
Translates to: FAHSLRNLSCSRAAHGWRTAQWL*NFLPIL
Trigger: GAGTATGGGCAAAAAGTTTCAGAGCCATTGGGCGGT...TCTCCACCCGTGGGCTGCCCGCGAGCAACTGAGGTTCCGGAGGGAGTGGGCGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR-3UTR TCA 90 bp CAGCGCCTGGGATGTGTCAGAGGTACCTGCGAGGAACATTTGCGTGCGATTCCACCCGGATCGCTGAACTaGGAGGTGGCGCAGAGTGTC +
Preference number: 2 (lower is better)
Translates to: QRLGCVRGTCEEHLRAIPPGSLN*EVAQSV
Trigger: GACACTCTGCGCCACCTCTCAGTTCAGCGATCCGGG...TGGAATCGCACGCAAATGTTCCTCGCAGGTACCTCTGACACATCCCAGGCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR-3UTR TCA 90 bp GCCACGTGCAAGAGGGTTTTGACCCTCTGCAACAGGCTGCCGGCAACTGGAGGACCCATACTCTTAGATTaGGGTCACCCCAGCCAGCGC +
Preference number: 2 (lower is better)
Translates to: ATCKRVLTLCNRLPATGGPILLD*GHPSQR
Trigger: GCGCTGGCTGGGGTGACCTCAATCTAAGAGTATGGG...TCCTCCAGTTGCCGGCAGCCTGTTGCAGAGGGTCAAAACCCTCTTGCACGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR-3UTR CCA 90 bp AGTCGGCAGCGGAGTCGGTCCCAGGACATGGCTATTGCTTTGCAGCTCTCACTGCTCCAGCCCAGCGCCTaGGATGTGTCAGAGGTACCT +
Preference number: 2 (lower is better)
Translates to: SRQRSRSQDMAIALQLSLLQPSA*DVSEVP
Trigger: AGGTACCTCTGACACATCCCAGGCGCTGGGCTGGAG...CAGTGAGAGCTGCAAAGCAATAGCCATGTCCTGGGACCGACTCCGCTGCCGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR CAA 90 bp CAGAGGTACCTGCGAGGAACATTTGCGTGCGATTCCACGCACGCGTaGCATCCCTCTTCCCAAACCCGGATCGCTGAACTGAGAGGTGGC +
Preference number: 2 (lower is better)
Translates to: QRYLRGTFACDSTHA*HPSSQTRIAELRGG
Trigger: GCCACCTCTCAGTTCAGCGATCCGGGTTTGGGAAGAGGGATGCAACGCGTGCGTGGAATCGCACGCAAATGTTCCTCGCAGGTACCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR-3UTR GCA 90 bp CCGGTAGCACAAGAGCCTCAAGGGTCGCCGAATCCTCCTGAAATCCCCGGTGGGCCAGGACATGGCTATTaGTTTGCAGCTCTCACTGGG +
Preference number: 2 (lower is better)
Translates to: PVAQEPQGSPNPPEIPGGPGHGY*FAALTG
Trigger: CCCAGTGAGAGCTGCAAAGCAATAGCCATGTCCTGG...CCCACCGGGGATTTCAGGAGGATTCGGCGACCCTTGAGGCTCTTGTGCTACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR-3UTR GCA 90 bp GTCGGCAGCGGAGTCGGTCCCAGGACATGGCTATTGCTTTGCAGCTCTCACTGGTGTGTCAGAGGTACCTaGGAGGAACATTTGCGTGCG +
Preference number: 2 (lower is better)
Translates to: VGSGVGPRTWLLLCSSHWCVRGT*EEHLRA
Trigger: CGCACGCAAATGTTCCTCGCAGGTACCTCTGACACA...CCAGTGAGAGCTGCAAAGCAATAGCCATGTCCTGGGACCGACTCCGCTGCCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR-3UTR GCA 90 bp GGCAGGAGACCTCTGCTCCTAGACTTGGGGGTCATTTACACACTCTCATCCCCACCTGCGAGGAACATTTaGGTGCGATTCCACGCACGC +
Preference number: 2 (lower is better)
Translates to: GRRPLLLDLGVIYTLSSPPARNI*VRFHAR
Trigger: GCGTGCGTGGAATCGCACGCAAATGTTCCTCGCAGG...TGGGGATGAGAGTGTGTAAATGACCCCCAAGTCTAGGAGCAGAGGTCTCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR-3UTR CCA 90 bp AGACCTCTGCTCCTAGACTTGGGGGTCATTTACACACTCTCATCCCCAAACCCCCTCTCACTGGGACCTTaGGACGGTCAGCCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: RPLLLDLGVIYTLSSPNPLSLGP*DGQPPS
Trigger: AGAGGGAGGCTGACCGTCCCAAGGTCCCAGTGAGAG...GGGGTTTGGGGATGAGAGTGTGTAAATGACCCCCAAGTCTAGGAGCAGAGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR CAA 90 bp CATGCTTTGGTACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATaGGAGCTGCCCTCGTCCTGCCACTTGTCCAGACTCCTCCTTCTT +
Preference number: 2 (lower is better)
Translates to: HALVQVLDEEDELPE*ELPSSCHLSRLLLL
Trigger: AAGAAGGAGGAGTCTGGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTACCAAAGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
3UTR CAA 90 bp TCGACAGCAGACATGAAGGAGACACAGATAGATGGCTTGTTGGTTTaGCTTTACCTCTCTAGTTGCCTGCCTGTTACAGACCTAGACAAG +
Preference number: 2 (lower is better)
Translates to: STADMKETQIDGLLV*LYLSSCLPVTDLDK
Trigger: CTTGTCTAGGTCTGTAACAGGCAGGCAACTAGAGAGGTAAAGCAAAACCAACAAGCCATCTATCTGTGTCTCCTTCATGTCTGCTGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR-3UTR TCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTATAAACCTGCTATCTTaGGGTCCTGGTCTTTTAAAA +
Preference number: 2 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAINLLS*GPGLLK
Trigger: TTTTAAAAGACCAGGACCTCAAGATAGCAGGTTTAT...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR CAA 90 bp CACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTaGCACTCCTATAGAACAACCATTTCTGAAGACCAGCTCTGCCTA +
Preference number: 2 (lower is better)
Translates to: HTPNPMNSDNPIPCW*HSYRTTISEDQLCL
Trigger: TAGGCAGAGCTGGTCTTCAGAAATGGTTGTTCTATAGGAGTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR CAA 90 bp TCTCATTCGACAGCAGACATGAAGGAGACACAGATAGATGGCTTGTaGGTTTTGCTTTACCTCTCTAGTTGCCTGCCTGTTACAGACCTA +
Preference number: 2 (lower is better)
Translates to: SHSTADMKETQIDGL*VLLYLSSCLPVTDL
Trigger: TAGGTCTGTAACAGGCAGGCAACTAGAGAGGTAAAGCAAAACCAACAAGCCATCTATCTGTGTCTCCTTCATGTCTGCTGTCGAATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR CAA 90 bp TCTTCTCATTCGACAGCAGACATGAAGGAGACACAGATAGATGGCTaGTTGGTTTTGCTTTACCTCTCTAGTTGCCTGCCTGTTACAGAC +
Preference number: 2 (lower is better)
Translates to: SSHSTADMKETQIDG*LVLLYLSSCLPVTD
Trigger: GTCTGTAACAGGCAGGCAACTAGAGAGGTAAAGCAAAACCAACAAGCCATCTATCTGTGTCTCCTTCATGTCTGCTGTCGAATGAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR-3UTR GCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAGCTCATCATTTGTCTTaGCAAGTCGCCGCCCTGCTG +
Preference number: 2 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEAHHLS*QVAALL
Trigger: CAGCAGGGCGGCGACTTGGCAAGACAAATGATGAGC...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR-3UTR CCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAACAAGCACAGCGAGGATaGTCATGGATTGAAGGTGTG +
Preference number: 2 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEQAQRG*SWIEGV
Trigger: CACACCTTCAATCCATGACCATCCTCGCTGTGCTTG...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR-3UTR TCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAACATGGATTGAAGGTGTaGGATCCAGTGGTGTTTTCC +
Preference number: 2 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEHGLKV*DPVVFS
Trigger: GGAAAACACCACTGGATCTCACACCTTCAATCCATG...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR-3UTR CCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAACACCATACACCTTCGTaGCATGGTAGAACAGATGAG +
Preference number: 2 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEHHTPS*HGRTDE
Trigger: CTCATCTGTTCTACCATGCCACGAAGGTGTATGGTG...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR-3UTR CCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACGGTGAGCTAAGTCTTTaGTTTCTTTGGACTATAAAT +
Preference number: 2 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHGELSL*FLWTIN
Trigger: ATTTATAGTCCAAAGAAACCAAAGACTTAGCTCACC...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR-3UTR GCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAGGCTCAAAATCACTATaGTCCAAACCACTAAACAGC +
Preference number: 2 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEGSKSL*SKPLNS
Trigger: GCTGTTTAGTGGTTTGGAGCATAGTGATTTTGAGCC...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR-3UTR GCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAACCATACCATGTTGGTTaGACTCCTATAGAACAACCA +
Preference number: 2 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEPYHVG*TPIEQP
Trigger: TGGTTGTTCTATAGGAGTGCAACCAACATGGTATGG...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR GCA 72 bp CCCGGTGGGGTTCGGGCTGGGCTCAGCTTTCTTCTCTaGCTATCCGCGGTCTCGGGGAGCCAGGCGCGGTGT +
Preference number: 3 (lower is better)
Translates to: PGGVRAGLSFLL*LSAVSGSQARC
Trigger: ACACCGCGCCTGGCTCCCCGAGACCGCGGATAGGCAGAGAAGAAAGCTGAGCCCAGCCCGAACCCCACCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR GCA 72 bp GGGGTCACAGCAGCCAGTTCGGCCAAACATCGACGCTaGTCCGGCACGCTCCAGCCCAGCGCCTGGGATGTG +
Preference number: 3 (lower is better)
Translates to: GVTAASSAKHRR*SGTLQPSAWDV
Trigger: CACATCCCAGGCGCTGGGCTGGAGCGTGCCGGAGCAGCGTCGATGTTTGGCCGAACTGGCTGCTGTGACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR CCA 72 bp GCAACAGGCTGCCGGCAACTGGAGGACAGAGGGGCGTaGAGAAGCCACCACTCTCCCGCTTGGGCTCTGGAG +
Preference number: 3 (lower is better)
Translates to: ATGCRQLEDRGA*RSHHSPAWALE
Trigger: CTCCAGAGCCCAAGCGGGAGAGTGGTGGCTTCTCCACGCCCCTCTGTCCTCCAGTTGCCGGCAGCCTGTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR-3UTR CAA 90 bp GCCACGTGCAAGAGGGTTTTGACCCTCTGCAACAGGCTGCCGGCAACTGGAGGACCTCCGGAACCTCAGTaGCTCGCGGGCAGCCCACGG +
Preference number: 3 (lower is better)
Translates to: ATCKRVLTLCNRLPATGGPPEPQ*LAGSPR
Trigger: CCGTGGGCTGCCCGCGAGCAACTGAGGTTCCGGAGG...TCCTCCAGTTGCCGGCAGCCTGTTGCAGAGGGTCAAAACCCTCTTGCACGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR GCA 72 bp GTGACCGGAAGGCGCCTCCCCAAACACAGCGCCACGTaGAAGAGGGTTTTGACCCTCTGCAACAGGCTGCCG +
Preference number: 3 (lower is better)
Translates to: VTGRRLPKHSAT*KRVLTLCNRLP
Trigger: CGGCAGCCTGTTGCAGAGGGTCAAAACCCTCTTGCACGTGGCGCTGTGTTTGGGGAGGCGCCTTCCGGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR CCA 72 bp CATCGACGCTGCTCCGGCACGCTCCAGCCCAGCGCCTaGGATGTGTCAGAGGTACCTGCGAGGAACATTTGC +
Preference number: 3 (lower is better)
Translates to: HRRCSGTLQPSA*DVSEVPARNIC
Trigger: GCAAATGTTCCTCGCAGGTACCTCTGACACATCCCAGGCGCTGGGCTGGAGCGTGCCGGAGCAGCGTCGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR CCA 72 bp CTCCGGAACCTCAGTTGCTCGCGGGCAGCCCACGGGTaGAGATATGGTGCCGGTAGCACAAGAGCCTCAAGG +
Preference number: 3 (lower is better)
Translates to: LRNLSCSRAAHG*RYGAGSTRASR
Trigger: CCTTGAGGCTCTTGTGCTACCGGCACCATATCTCCACCCGTGGGCTGCCCGCGAGCAACTGAGGTTCCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR-3UTR CAA 90 bp ACATCGACGCTGCTCCGGCACGCTCCAGCCCAGCGCCTGGGATGTGTCAGAGGTGATTCCACGCACGCGTaGCATCCCTCTTCCCAAACC +
Preference number: 3 (lower is better)
Translates to: TSTLLRHAPAQRLGCVRGDSTHA*HPSSQT
Trigger: GGTTTGGGAAGAGGGATGCAACGCGTGCGTGGAATC...ACCTCTGACACATCCCAGGCGCTGGGCTGGAGCGTGCCGGAGCAGCGTCGATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR TCA 72 bp CGTTGCATCCCTCTTCCCAAACCCGGATCGCTGAACTaGGAGGTGGCGCAGAGTGTCTCACCAGGTGCGGGG +
Preference number: 3 (lower is better)
Translates to: RCIPLPKPGSLN*EVAQSVSPGAG
Trigger: CCCCGCACCTGGTGAGACACTCTGCGCCACCTCTCAGTTCAGCGATCCGGGTTTGGGAAGAGGGATGCAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR TCA 72 bp GGTAGCACAAGAGCCTCAAGGGTCGCCGAATCCTCCTaGAATCCCCGGTGGGGTTCGGGCTGGGCTCAGCTT +
Preference number: 3 (lower is better)
Translates to: GSTRASRVAESS*NPRWGSGWAQL
Trigger: AAGCTGAGCCCAGCCCGAACCCCACCGGGGATTTCAGGAGGATTCGGCGACCCTTGAGGCTCTTGTGCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR TCA 72 bp GCCTCCCCAAACACAGCGCCACGTGCAAGAGGGTTTTaGCCCTCTGCAACAGGCTGCCGGCAACTGGAGGAC +
Preference number: 3 (lower is better)
Translates to: ASPNTAPRARGF*PSATGCRQLED
Trigger: GTCCTCCAGTTGCCGGCAGCCTGTTGCAGAGGGTCAAAACCCTCTTGCACGTGGCGCTGTGTTTGGGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR TCA 72 bp CCTGTCGCCCTTCTTCCACCAGCCGCTGTTATTTCGTaGCCGGAAGGCGCCTCCCCAAACACAGCGCCACGT +
Preference number: 3 (lower is better)
Translates to: PVALLPPAAVIS*PEGASPNTAPR
Trigger: ACGTGGCGCTGTGTTTGGGGAGGCGCCTTCCGGTCACGAAATAACAGCGGCTGGTGGAAGAAGGGCGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR GCA 72 bp GCTCCAGCCCAGCGCCTGGGATGTGTCAGAGGTACCTaGGAGGAACATTTGCGTGCGATTCCACGCACGCGT +
Preference number: 3 (lower is better)
Translates to: APAQRLGCVRGT*EEHLRAIPRTR
Trigger: ACGCGTGCGTGGAATCGCACGCAAATGTTCCTCGCAGGTACCTCTGACACATCCCAGGCGCTGGGCTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR GCA 72 bp GGCAGCGGAGTCGGTCCCAGGACATGGCTATTGCTTTaGAGCTCTCACTGGGACCTTGGGACGGTCAGCCTC +
Preference number: 3 (lower is better)
Translates to: GSGVGPRTWLLL*SSHWDLGTVSL
Trigger: GAGGCTGACCGTCCCAAGGTCCCAGTGAGAGCTGCAAAGCAATAGCCATGTCCTGGGACCGACTCCGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR CCA 72 bp GAGGGTTTTGACCCTCTGCAACAGGCTGCCGGCAACTaGAGGACAGAGGGGCGTGGAGAAGCCACCACTCTC +
Preference number: 3 (lower is better)
Translates to: EGFDPLQQAAGN*RTEGRGEATTL
Trigger: GAGAGTGGTGGCTTCTCCACGCCCCTCTGTCCTCCAGTTGCCGGCAGCCTGTTGCAGAGGGTCAAAACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR TCA 72 bp GCACGCGTTGCATCCCTCTTCCCAAACCCGGATCGCTaGACTGAGAGGTGGCGCAGAGTGTCTCACCAGGTG +
Preference number: 3 (lower is better)
Translates to: ARVASLFPNPDR*TERWRRVSHQV
Trigger: CACCTGGTGAGACACTCTGCGCCACCTCTCAGTTCAGCGATCCGGGTTTGGGAAGAGGGATGCAACGCGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR GCA 72 bp GAGTCGGCAGCGGAGTCGGTCCCAGGACATGGCTATTaGTTTGCAGCTCTCACTGGGACCTTGGGACGGTCA +
Preference number: 3 (lower is better)
Translates to: ESAAESVPGHGY*FAALTGTLGRS
Trigger: TGACCGTCCCAAGGTCCCAGTGAGAGCTGCAAAGCAATAGCCATGTCCTGGGACCGACTCCGCTGCCGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR GCA 72 bp AAACACAGCGCCACGTGCAAGAGGGTTTTGACCCTCTaGAACAGGCTGCCGGCAACTGGAGGACAGAGGGGC +
Preference number: 3 (lower is better)
Translates to: KHSATCKRVLTL*NRLPATGGQRG
Trigger: GCCCCTCTGTCCTCCAGTTGCCGGCAGCCTGTTGCAGAGGGTCAAAACCCTCTTGCACGTGGCGCTGTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR CCA 72 bp CGCCAAGGAGAGCTTCCAGCTGAACTCAGAAACACCTaGGGCTTGGGGTTTCGGGCAGGAGACCTCTGCTCC +
Preference number: 3 (lower is better)
Translates to: RQGELPAELRNT*GLGFRAGDLCS
Trigger: GGAGCAGAGGTCTCCTGCCCGAAACCCCAAGCCCCAGGTGTTTCTGAGTTCAGCTGGAAGCTCTCCTTGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR-3UTR CAA 90 bp GCCACGTGCAAGAGGGTTTTGACCCTCTGCAACAGGCTGCCGGCAACTGGAGGAACCTGCGAGGAACATTaGCGTGCGATTCCACGCACG +
Preference number: 3 (lower is better)
Translates to: ATCKRVLTLCNRLPATGGTCEEH*RAIPRT
Trigger: CGTGCGTGGAATCGCACGCAAATGTTCCTCGCAGGT...TCCTCCAGTTGCCGGCAGCCTGTTGCAGAGGGTCAAAACCCTCTTGCACGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR-3UTR CAA 90 bp GCCACGTGCAAGAGGGTTTTGACCCTCTGCAACAGGCTGCCGGCAACTGGAGGAGCCCATACTCTTAGATaGAGGTCACCCCAGCCAGCG +
Preference number: 3 (lower is better)
Translates to: ATCKRVLTLCNRLPATGGAHTLR*RSPQPA
Trigger: CGCTGGCTGGGGTGACCTCAATCTAAGAGTATGGGC...TCCTCCAGTTGCCGGCAGCCTGTTGCAGAGGGTCAAAACCCTCTTGCACGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR-3UTR CAA 90 bp GCGCCTCCCCAAACACAGCGCCACGTGCAAGAGGGTTTTGACCCTCTGCAACAGGACATGGCTATTGCTTaGCAGCTCTCACTGGGACCT +
Preference number: 3 (lower is better)
Translates to: APPQTQRHVQEGFDPLQQDMAIA*QLSLGP
Trigger: AGGTCCCAGTGAGAGCTGCAAAGCAATAGCCATGTC...CTGTTGCAGAGGGTCAAAACCCTCTTGCACGTGGCGCTGTGTTTGGGGAGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR GCA 72 bp GCCTGGGATGTGTCAGAGGTACCTGCGAGGAACATTTaGGTGCGATTCCACGCACGCGTTGCATCCCTCTTC +
Preference number: 3 (lower is better)
Translates to: AWDVSEVPARNI*VRFHARVASLF
Trigger: GAAGAGGGATGCAACGCGTGCGTGGAATCGCACGCAAATGTTCCTCGCAGGTACCTCTGACACATCCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR GCA 72 bp GGGATGTGTCAGAGGTACCTGCGAGGAACATTTGCGTaGGATTCCACGCACGCGTTGCATCCCTCTTCCCAA +
Preference number: 3 (lower is better)
Translates to: GMCQRYLRGTFA*DSTHALHPSSQ
Trigger: TTGGGAAGAGGGATGCAACGCGTGCGTGGAATCGCACGCAAATGTTCCTCGCAGGTACCTCTGACACATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR GCA 72 bp TGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTaGCCTCGTCCTGCCACTTGTCCAGACTCCTCCTTC +
Preference number: 3 (lower is better)
Translates to: CLMKKMSCLNWS*PRPATCPDSSF
Trigger: GAAGGAGGAGTCTGGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
3UTR TCA 72 bp GCCAAGCACAGCGAGGATGGTCATGGATTGAAGGTGTaGGATCCAGTGGTGTTTTCCTGCTCATCATTTGTC +
Preference number: 3 (lower is better)
Translates to: AKHSEDGHGLKV*DPVVFSCSSFV
Trigger: GACAAATGATGAGCAGGAAAACACCACTGGATCTCACACCTTCAATCCATGACCATCCTCGCTGTGCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR CCA 72 bp TGCTCCAAACCACTAAACAGCCAAGCACAGCGAGGATaGTCATGGATTGAAGGTGTGAGATCCAGTGGTGTT +
Preference number: 3 (lower is better)
Translates to: CSKPLNSQAQRG*SWIEGVRSSGV
Trigger: AACACCACTGGATCTCACACCTTCAATCCATGACCATCCTCGCTGTGCTTGGCTGTTTAGTGGTTTGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR GCA 72 bp ATGCTTTGGTACAAGTGCTTGATGAAGAAGATGAGTTaGCTGAATTGGAGCTGCCCTCGTCCTGCCACTTGT +
Preference number: 3 (lower is better)
Translates to: MLWYKCLMKKMS*LNWSCPRPATC
Trigger: ACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTACCAAAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
3UTR-3UTR CAA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTTATAAACCTGCTATCTaGAGGTCCTGGTCTTTTAAA +
Preference number: 3 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAYKPAI*RSWSFK
Trigger: TTTAAAAGACCAGGACCTCAAGATAGCAGGTTTATA...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR GCA 72 bp CTTAAAAGATGTCCGCTCAATGGCTCAAAATCACTATaGTCCAAACCACTAAACAGCCAAGCACAGCGAGGA +
Preference number: 3 (lower is better)
Translates to: LKRCPLNGSKSL*SKPLNSQAQRG
Trigger: TCCTCGCTGTGCTTGGCTGTTTAGTGGTTTGGAGCATAGTGATTTTGAGCCATTGAGCGGACATCTTTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR GCA 72 bp ATAGATGGCTTGTTGGTTTTGCTTTACCTCTCTAGTTaGCTGCCTGTTACAGACCTAGACAAGGTGCTGAGA +
Preference number: 3 (lower is better)
Translates to: IDGLLVLLYLSS*LPVTDLDKVLR
Trigger: TCTCAGCACCTTGTCTAGGTCTGTAACAGGCAGGCAACTAGAGAGGTAAAGCAAAACCAACAAGCCATCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR TCA 72 bp AATTCCACCATTTCTCAGTTGCACCTGCTGTTTTGTTaGCGTCCAAGTCATAAAATTTCTGGGATTGGCAAT +
Preference number: 3 (lower is better)
Translates to: NSTISQLHLLFC*RPSHKISGIGN
Trigger: ATTGCCAATCCCAGAAATTTTATGACTTGGACGTCAACAAAACAGCAGGTGCAACTGAGAAATGGTGGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR GCA 72 bp TTCTATACAGTTCCACCAATTCCACCATTTCTCAGTTaGACCTGCTGTTTTGTTGACGTCCAAGTCATAAAA +
Preference number: 3 (lower is better)
Translates to: FYTVPPIPPFLS*TCCFVDVQVIK
Trigger: TTTTATGACTTGGACGTCAACAAAACAGCAGGTGCAACTGAGAAATGGTGGAATTGGTGGAACTGTATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR TCA 72 bp ACAGATTATGGAACCATGTCTATCTCTCTACTTAAGTaGCATTTATGGATCCTGAAAAGGAGTGTGCCATCT +
Preference number: 3 (lower is better)
Translates to: TDYGTMSISLLK*HLWILKRSVPS
Trigger: AGATGGCACACTCCTTTTCAGGATCCATAAATGTCACTTAAGTAGAGAGATAGACATGGTTCCATAATCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR TCA 72 bp CAACTGAATTCAGAGAGAATTTTTCTGGGAATCAAGTaGTTCACTGGGGTACCACTAATACGACTTCATTTT +
Preference number: 3 (lower is better)
Translates to: QLNSERIFLGIK*FTGVPLIRLHF
Trigger: AAAATGAAGTCGTATTAGTGGTACCCCAGTGAATCACTTGATTCCCAGAAAAATTCTCTCTGAATTCAGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp TTCGGCCAAACATCGACGCTGCTCCGGCACGCTCCAGCCCAGCGCCTGGGATGTGAGGTGGGCGTGAGGTaGTGCTCCCCGTGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: FGQTSTLLRHAPAQRLGCEVGVR*CSPWRP
Trigger: CGGCCGCCACGGGGAGCAGCACCTCACGCCCACCTC...ACATCCCAGGCGCTGGGCTGGAGCGTGCCGGAGCAGCGTCGATGTTTGGCCGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp CCAGTTCGGCCAAACATCGACGCTGCTCCGGCACGCTCCAGCCCAGCGCCTGGGGCGCGGTGTCTGCGCTaGGCCAAGGAGAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PVRPNIDAAPARSSPAPGARCLR*AKESFQ
Trigger: CTGGAAGCTCTCCTTGGCGCAGCGCAGACACCGCGC...CCCAGGCGCTGGGCTGGAGCGTGCCGGAGCAGCGTCGATGTTTGGCCGAACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp CCAGTTCGGCCAAACATCGACGCTGCTCCGGCACGCTCCAGCCCAGCGCCTGGGCCGAGCATGGCCGGGTaGTGGGCTTCGAAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: PVRPNIDAAPARSSPAPGPSMAG*WASKPL
Trigger: CAACGGCTTCGAAGCCCACCACCCGGCCATGCTCGG...CCCAGGCGCTGGGCTGGAGCGTGCCGGAGCAGCGTCGATGTTTGGCCGAACTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp CCAGTTCGGCCAAACATCGACGCTGCTCCGGCACGCTCCAGCCCAGCGCCTGGGGCGTTCAGGTGGGCGTaGGGATGGTGCGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PVRPNIDAAPARSSPAPGAFRWA*GWCGGR
Trigger: CCTTCCTCCGCACCATCCCCACGCCCACCTGAACGC...CCCAGGCGCTGGGCTGGAGCGTGCCGGAGCAGCGTCGATGTTTGGCCGAACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp ACATCGACGCTGCTCCGGCACGCTCCAGCCCAGCGCCTGGGATGTGTCAGAGGTCGGCAGAGCACCCTCTaGGCGAAGATGGCCTGCGCG +
Preference number: 4 (lower is better)
Translates to: TSTLLRHAPAQRLGCVRGRQSTL*AKMACA
Trigger: CGCGCAGGCCATCTTCGCGCAGAGGGTGCTCTGCCG...ACCTCTGACACATCCCAGGCGCTGGGCTGGAGCGTGCCGGAGCAGCGTCGATGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp TCCAGCCCAGCGCCTGGGATGTGTCAGAGGTACCTGCGAGGAACATTTGCGTGCGTGGGCGTGAGGTGCTaGTCCCCGTGGCGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: SSPAPGMCQRYLRGTFACVGVRC*SPWRPS
Trigger: GCTCGGCCGCCACGGGGAGCAGCACCTCACGCCCAC...GCACGCAAATGTTCCTCGCAGGTACCTCTGACACATCCCAGGCGCTGGGCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp TCCACCAGCCGCTGTTATTTCGTGACCGGAAGGCGCCTCCCCAAACACAGCGCCAGGGGCGAGAGGCTCTaGCCCATGCCGGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: STSRCYFVTGRRLPKHSARGERL*PMPATS
Trigger: GGACGTGGCCGGCATGGGCCAGAGCCTCTCGCCCCT...GGCGCTGTGTTTGGGGAGGCGCCTTCCGGTCACGAAATAACAGCGGCTGGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp CCAGTTCGGCCAAACATCGACGCTGCTCCGGCACGCTCCAGCCCAGCGCCTGGGCCTTGCTGGGAGTTGTaGATGCTGCCCAGACCGGAG +
Preference number: 4 (lower is better)
Translates to: PVRPNIDAAPARSSPAPGPCWEL*MLPRPE
Trigger: CTCCGGTCTGGGCAGCATCCACAACTCCCAGCAAGG...CCCAGGCGCTGGGCTGGAGCGTGCCGGAGCAGCGTCGATGTTTGGCCGAACTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp CCAGTTCGGCCAAACATCGACGCTGCTCCGGCACGCTCCAGCCCAGCGCCTGGGGAAACACCTGGGGCTTaGGGTTTCGGGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: PVRPNIDAAPARSSPAPGETPGA*GFGQET
Trigger: GGTCTCCTGCCCGAAACCCCAAGCCCCAGGTGTTTC...CCCAGGCGCTGGGCTGGAGCGTGCCGGAGCAGCGTCGATGTTTGGCCGAACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp TCAGTTGCTCGCGGGCAGCCCACGGGTGGAGATATGGTGCCGGTAGCACAAGAGGCTGTGCCCAGGAGTTaGCCGTGGCCCTGGGCGTTC +
Preference number: 4 (lower is better)
Translates to: SVARGQPTGGDMVPVAQEAVPRS*PWPWAF
Trigger: GAACGCCCAGGGCCACGGGCAACTCCTGGGCACAGC...CTCTTGTGCTACCGGCACCATATCTCCACCCGTGGGCTGCCCGCGAGCAACTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp TCCACCAGCCGCTGTTATTTCGTGACCGGAAGGCGCCTCCCCAAACACAGCGCCTCTTGTCGGTGGGCATaGCGGCCCCCGGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: STSRCYFVTGRRLPKHSASCRWA*RPPGGH
Trigger: ATGCCCACCCGGGGGCCGCCATGCCCACCGACAAGA...GGCGCTGTGTTTGGGGAGGCGCCTTCCGGTCACGAAATAACAGCGGCTGGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp CAAACCCGGATCGCTGAACTGAGAGGTGGCGCAGAGTGTCTCACCAGGTGCGGGAGTTGCCCGTGGCCCTaGGCGTTCAGGTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: QTRIAELRGGAECLTRCGSCPWP*AFRWAW
Trigger: CCACGCCCACCTGAACGCCCAGGGCCACGGGCAACT...CCCGCACCTGGTGAGACACTCTGCGCCACCTCTCAGTTCAGCGATCCGGGTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp GCCACGTGCAAGAGGGTTTTGACCCTCTGCAACAGGCTGCCGGCAACTGGAGGACCCTCTGCGCGAAGATaGCCTGCGCGCCGGTCACCG +
Preference number: 4 (lower is better)
Translates to: ATCKRVLTLCNRLPATGGPSARR*PARRSP
Trigger: CGGTGACCGGCGCGCAGGCCATCTTCGCGCAGAGGG...TCCTCCAGTTGCCGGCAGCCTGTTGCAGAGGGTCAAAACCCTCTTGCACGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR TCA 90 bp TTCGCCCACTCCCTCCGGAACCTCAGTTGCTCGCGGGCAGCCCACGGGTGGAGACCCATACTCTTAGATTaGGGTCACCCCAGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: FAHSLRNLSCSRAAHGWRPILLD*GHPSQR
Trigger: GCGCTGGCTGGGGTGACCTCAATCTAAGAGTATGGG...TCTCCACCCGTGGGCTGCCCGCGAGCAACTGAGGTTCCGGAGGGAGTGGGCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR TCA 90 bp GCTCGCGGGCAGCCCACGGGTGGAGATATGGTGCCGGTAGCACAAGAGCCTCAAGCCGCTGTTATTTCGTaGCCGGAAGGCGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: ARGQPTGGDMVPVAQEPQAAVIS*PEGASP
Trigger: TGGGGAGGCGCCTTCCGGTCACGAAATAACAGCGGC...TTGAGGCTCTTGTGCTACCGGCACCATATCTCCACCCGTGGGCTGCCCGCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp AAATCCCCGGTGGGGTTCGGGCTGGGCTCAGCTTTCTTCTCTGCCTATCCGCGGAGCGGAGCGCGGACATaGGCTGGAACTCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KSPVGFGLGSAFFSAYPRSGART*AGTPAP
Trigger: AGGAGCCGGAGTTCCAGCGCATGTCCGCGCTCCGCT...CCGCGGATAGGCAGAGAAGAAAGCTGAGCCCAGCCCGAACCCCACCGGGGATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp AACCTCAGTTGCTCGCGGGCAGCCCACGGGTGGAGATATGGTGCCGGTAGCACAGCCAAACATCGACGCTaGTCCGGCACGCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: NLSCSRAAHGWRYGAGSTAKHRR*SGTLQP
Trigger: GGGCTGGAGCGTGCCGGAGCAGCGTCGATGTTTGGC...TGTGCTACCGGCACCATATCTCCACCCGTGGGCTGCCCGCGAGCAACTGAGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp AAATCCCCGGTGGGGTTCGGGCTGGGCTCAGCTTTCTTCTCTGCCTATCCGCGGTGCCCAGACCGGAGCTaGAGAGGGGCGAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: KSPVGFGLGSAFFSAYPRCPDRS*RGARGS
Trigger: AGAGCCTCTCGCCCCTCTCCAGCTCCGGTCTGGGCA...CCGCGGATAGGCAGAGAAGAAAGCTGAGCCCAGCCCGAACCCCACCGGGGATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp GCCACGTGCAAGAGGGTTTTGACCCTCTGCAACAGGCTGCCGGCAACTGGAGGACCCTGGGCGTTCAGGTaGGCGTGGGGATGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: ATCKRVLTLCNRLPATGGPWAFR*AWGWCG
Trigger: TCCGCACCATCCCCACGCCCACCTGAACGCCCAGGG...TCCTCCAGTTGCCGGCAGCCTGTTGCAGAGGGTCAAAACCCTCTTGCACGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp TCCAGCCCAGCGCCTGGGATGTGTCAGAGGTACCTGCGAGGAACATTTGCGTGCCGGTCACCGAAGGGTTaGGCTCCCGGGCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SSPAPGMCQRYLRGTFACRSPKG*APGLCP
Trigger: TGGGCACAGCCCGGGAGCCCAACCCTTCGGTGACCG...GCACGCAAATGTTCCTCGCAGGTACCTCTGACACATCCCAGGCGCTGGGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp TTCGGCCAAACATCGACGCTGCTCCGGCACGCTCCAGCCCAGCGCCTGGGATGTCTCTCACTGGGACCTTaGGACGGTCAGCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: FGQTSTLLRHAPAQRLGCLSLGP*DGQPPS
Trigger: AGAGGGAGGCTGACCGTCCCAAGGTCCCAGTGAGAG...ACATCCCAGGCGCTGGGCTGGAGCGTGCCGGAGCAGCGTCGATGTTTGGCCGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp CAAACCCGGATCGCTGAACTGAGAGGTGGCGCAGAGTGTCTCACCAGGTGCGGGCGGGCAGCCCACGGGTaGAGATATGGTGCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: QTRIAELRGGAECLTRCGRAAHG*RYGAGS
Trigger: GCTACCGGCACCATATCTCCACCCGTGGGCTGCCCG...CCCGCACCTGGTGAGACACTCTGCGCCACCTCTCAGTTCAGCGATCCGGGTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR TCA 90 bp CAGCGCCTGGGATGTGTCAGAGGTACCTGCGAGGAACATTTGCGTGCGATTCCAGCGGAGGAAGGCCGTTaGTGGGCACCATGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: QRLGCVRGTCEEHLRAIPAEEGR*WAPCRP
Trigger: CGGCCGGCATGGTGCCCATCAACGGCCTTCCTCCGC...TGGAATCGCACGCAAATGTTCCTCGCAGGTACCTCTGACACATCCCAGGCGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR TCA 90 bp TCCACCAGCCGCTGTTATTTCGTGACCGGAAGGCGCCTCCCCAAACACAGCGCCCCCGGATCGCTGAACTaGGAGGTGGCGCAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: STSRCYFVTGRRLPKHSAPGSLN*EVAQSV
Trigger: GACACTCTGCGCCACCTCTCAGTTCAGCGATCCGGG...GGCGCTGTGTTTGGGGAGGCGCCTTCCGGTCACGAAATAACAGCGGCTGGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR TCA 90 bp CCGGTAGCACAAGAGCCTCAAGGGTCGCCGAATCCTCCTGAAATCCCCGGTGGGGTCGCCGAATCCTCCTaGAATCCCCGGTGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: PVAQEPQGSPNPPEIPGGVAESS*NPRWGS
Trigger: CGAACCCCACCGGGGATTTCAGGAGGATTCGGCGAC...CCCACCGGGGATTTCAGGAGGATTCGGCGACCCTTGAGGCTCTTGTGCTACCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp GCCTGGGATGTGTCAGAGGTACCTGCGAGGAACATTTGCGTGCGATTCCACGCATGGGCTCCCGGGCTGTaGCCAGGAGTTGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: AWDVSEVPARNICVRFHAWAPGL*PGVARG
Trigger: GCCACGGGCAACTCCTGGGCACAGCCCGGGAGCCCA...TGCGTGGAATCGCACGCAAATGTTCCTCGCAGGTACCTCTGACACATCCCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp AACCTCAGTTGCTCGCGGGCAGCCCACGGGTGGAGATATGGTGCCGGTAGCACATCCAGGGTTTGGGGTTaGGCAGCAGGTCCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: NLSCSRAAHGWRYGAGSTSRVWG*AAGPRG
Trigger: CCCTCTCGGACCTGCTGCGCAACCCCAAACCCTGGA...TGTGCTACCGGCACCATATCTCCACCCGTGGGCTGCCCGCGAGCAACTGAGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp CAAACCCGGATCGCTGAACTGAGAGGTGGCGCAGAGTGTCTCACCAGGTGCGGGTGGGGGAGCCCTTGCTaGGAGTTGTGGATGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QTRIAELRGGAECLTRCGWGSPC*ELWMLP
Trigger: GGGCAGCATCCACAACTCCCAGCAAGGGCTCCCCCA...CCCGCACCTGGTGAGACACTCTGCGCCACCTCTCAGTTCAGCGATCCGGGTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp TGCGAGGAACATTTGCGTGCGATTCCACGCACGCGTTGCATCCCTCTTCCCAAAAGGTGCTGCTCCCCGTaGCGGCCGAGCATGGCCGGG +
Preference number: 4 (lower is better)
Translates to: CEEHLRAIPRTRCIPLPKRCCSP*RPSMAG
Trigger: CCCGGCCATGCTCGGCCGCCACGGGGAGCAGCACCT...TTTGGGAAGAGGGATGCAACGCGTGCGTGGAATCGCACGCAAATGTTCCTCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp CCGGTAGCACAAGAGCCTCAAGGGTCGCCGAATCCTCCTGAAATCCCCGGTGGGGAGGACAGAGGGGCGTaGAGAAGCCACCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: PVAQEPQGSPNPPEIPGGEDRGA*RSHHSP
Trigger: GGGAGAGTGGTGGCTTCTCCACGCCCCTCTGTCCTC...CCCACCGGGGATTTCAGGAGGATTCGGCGACCCTTGAGGCTCTTGTGCTACCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR TCA 90 bp GGGTGGAGATATGGTGCCGGTAGCACAAGAGCCTCAAGGGTCGCCGAATCCTCCCGAAGCCGTTGGGGGTaGGCATCTTGTCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GWRYGAGSTRASRVAESSRSRWG*ASCRWA
Trigger: TGCCCACCGACAAGATGCTCACCCCCAACGGCTTCG...GGAGGATTCGGCGACCCTTGAGGCTCTTGTGCTACCGGCACCATATCTCCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR TCA 90 bp AACCTCAGTTGCTCGCGGGCAGCCCACGGGTGGAGATATGGTGCCGGTAGCACACCAAACCCGGATCGCTaGACTGAGAGGTGGCGCAGA +
Preference number: 4 (lower is better)
Translates to: NLSCSRAAHGWRYGAGSTPNPDR*TERWRR
Trigger: TCTGCGCCACCTCTCAGTTCAGCGATCCGGGTTTGG...TGTGCTACCGGCACCATATCTCCACCCGTGGGCTGCCCGCGAGCAACTGAGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR TCA 90 bp CCAGTTCGGCCAAACATCGACGCTGCTCCGGCACGCTCCAGCCCAGCGCCTGGGACCGCCCAATGGCTCTaGAACTTTTTGCCCATACTC +
Preference number: 4 (lower is better)
Translates to: PVRPNIDAAPARSSPAPGTAQWL*NFLPIL
Trigger: GAGTATGGGCAAAAAGTTTCAGAGCCATTGGGCGGT...CCCAGGCGCTGGGCTGGAGCGTGCCGGAGCAGCGTCGATGTTTGGCCGAACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp GGGTGGAGATATGGTGCCGGTAGCACAAGAGCCTCAAGGGTCGCCGAATCCTCCAGAGGCTCTGGCCCATaGCGGCCACGTCCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: GWRYGAGSTRASRVAESSRGSGP*RPRPCG
Trigger: ACCACAAGGACGTGGCCGGCATGGGCCAGAGCCTCT...GGAGGATTCGGCGACCCTTGAGGCTCTTGTGCTACCGGCACCATATCTCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp CAAACCCGGATCGCTGAACTGAGAGGTGGCGCAGAGTGTCTCACCAGGTGCGGGGGGAGTTGTGGATGCTaGCCAGACCGGAGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: QTRIAELRGGAECLTRCGGSCGC*PDRSWR
Trigger: TCTCCAGCTCCGGTCTGGGCAGCATCCACAACTCCC...CCCGCACCTGGTGAGACACTCTGCGCCACCTCTCAGTTCAGCGATCCGGGTTTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTGAGGTGGGCGTGAGGTaGTGCTCCCCGTGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAEVGVR*CSPWRP
Trigger: CGGCCGCCACGGGGAGCAGCACCTCACGCCCACCTC...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp GCCTGGGATGTGTCAGAGGTACCTGCGAGGAACATTTGCGTGCGATTCCACGCAGCCAGGCGCGGTGTCTaGGCTGCGCCAAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: AWDVSEVPARNICVRFHAARRGV*AAPRRA
Trigger: AGCTCTCCTTGGCGCAGCGCAGACACCGCGCCTGGC...TGCGTGGAATCGCACGCAAATGTTCCTCGCAGGTACCTCTGACACATCCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp GGCAGGAGACCTCTGCTCCTAGACTTGGGGGTCATTTACACACTCTCATCCCCACGTGGCGGCCGAGCATaGCCGGGTGGTGGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: GRRPLLLDLGVIYTLSSPRGGRA*PGGGLR
Trigger: TCGAAGCCCACCACCCGGCCATGCTCGGCCGCCACG...TGGGGATGAGAGTGTGTAAATGACCCCCAAGTCTAGGAGCAGAGGTCTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTAGGTGCTGCTCCCCGTaGCGGCCGAGCATGGCCGGG +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPARCCSP*RPSMAG
Trigger: CCCGGCCATGCTCGGCCGCCACGGGGAGCAGCACCT...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp AGTCGGCAGCGGAGTCGGTCCCAGGACATGGCTATTGCTTTGCAGCTCTCACTGAGGTGGGCGTGGGGATaGTGCGGAGGAAGGCCGTTG +
Preference number: 4 (lower is better)
Translates to: SRQRSRSQDMAIALQLSLRWAWG*CGGRPL
Trigger: CAACGGCCTTCCTCCGCACCATCCCCACGCCCACCT...CAGTGAGAGCTGCAAAGCAATAGCCATGTCCTGGGACCGACTCCGCTGCCGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp AGCGTCCTAACCCTTACAACTCGTCTGTGCTACACACCCACCGCCCAATGGCTCCCCAGGAGTTGCCCGTaGCCCTGGGCGTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SVLTLTTRLCYTPTAQWLPRSCP*PWAFRW
Trigger: CCACCTGAACGCCCAGGGCCACGGGCAACTCCTGGG...GAGCCATTGGGCGGTGGGTGTGTAGCACAGACGAGTTGTAAGGGTTAGGACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp AAATCCCCGGTGGGGTTCGGGCTGGGCTCAGCTTTCTTCTCTGCCTATCCGCGGCTCCAGCCCAGCGCCTaGGATGTGTCAGAGGTACCT +
Preference number: 4 (lower is better)
Translates to: KSPVGFGLGSAFFSAYPRLQPSA*DVSEVP
Trigger: AGGTACCTCTGACACATCCCAGGCGCTGGGCTGGAG...CCGCGGATAGGCAGAGAAGAAAGCTGAGCCCAGCCCGAACCCCACCGGGGATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR CAA 72 bp CGGCAGCGGAGTCGGTCCCAGGACATGGCTATTGCTTaGCAGCTCTCACTGGGACCTTGGGACGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RQRSRSQDMAIA*QLSLGPWDGQP
Trigger: AGGCTGACCGTCCCAAGGTCCCAGTGAGAGCTGCAAAGCAATAGCCATGTCCTGGGACCGACTCCGCTGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR CAA 72 bp GGAGTCGGCAGCGGAGTCGGTCCCAGGACATGGCTATaGCTTTGCAGCTCTCACTGGGACCTTGGGACGGTC +
Preference number: 4 (lower is better)
Translates to: GVGSGVGPRTWL*LCSSHWDLGTV
Trigger: GACCGTCCCAAGGTCCCAGTGAGAGCTGCAAAGCAATAGCCATGTCCTGGGACCGACTCCGCTGCCGACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR CAA 72 bp CGCCTCCCCAAACACAGCGCCACGTGCAAGAGGGTTTaGACCCTCTGCAACAGGCTGCCGGCAACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RLPKHSATCKRV*TLCNRLPATGG
Trigger: TCCTCCAGTTGCCGGCAGCCTGTTGCAGAGGGTCAAAACCCTCTTGCACGTGGCGCTGTGTTTGGGGAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTTGGGCTCCCGGGCTGTaGCCAGGAGTTGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAWAPGL*PGVARG
Trigger: GCCACGGGCAACTCCTGGGCACAGCCCGGGAGCCCA...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp TCCACCAGCCGCTGTTATTTCGTGACCGGAAGGCGCCTCCCCAAACACAGCGCCCCTGCGAGGAACATTTaGGTGCGATTCCACGCACGC +
Preference number: 4 (lower is better)
Translates to: STSRCYFVTGRRLPKHSAPARNI*VRFHAR
Trigger: GCGTGCGTGGAATCGCACGCAAATGTTCCTCGCAGG...GGCGCTGTGTTTGGGGAGGCGCCTTCCGGTCACGAAATAACAGCGGCTGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp GGCAGGAGACCTCTGCTCCTAGACTTGGGGGTCATTTACACACTCTCATCCCCACTCCGGAACCTCAGTTaGTCGCGGGCAGCCCACGGG +
Preference number: 4 (lower is better)
Translates to: GRRPLLLDLGVIYTLSSPLRNLS*SRAAHG
Trigger: CCCGTGGGCTGCCCGCGAGCAACTGAGGTTCCGGAG...TGGGGATGAGAGTGTGTAAATGACCCCCAAGTCTAGGAGCAGAGGTCTCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTGCGGGCACCGGCTCATaGCTCACCCCGTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAAGTGS*LTPCSS
Trigger: CGAGCTGCACGGGGTGAGCCATGAGCCGGTGCCCGC...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGACCCGCCAGGCGCTGGTaGTGGTGCGGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRPARRW*WCGWWW
Trigger: CCACCACCACCCGCACCACCACCAGCGCCTGGCGGG...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTAGGGGCGAGAGGCTCTaGCCCATGCCGGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPARGERL*PMPATS
Trigger: GGACGTGGCCGGCATGGGCCAGAGCCTCTCGCCCCT...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp TCCAGCCCAGCGCCTGGGATGTGTCAGAGGTACCTGCGAGGAACATTTGCGTGCCGGTGGGGTTCGGGCTaGGCTCAGCTTTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SSPAPGMCQRYLRGTFACRWGSG*AQLSSL
Trigger: CAGAGAAGAAAGCTGAGCCCAGCCCGAACCCCACCG...GCACGCAAATGTTCCTCGCAGGTACCTCTGACACATCCCAGGCGCTGGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp AGTCGGCAGCGGAGTCGGTCCCAGGACATGGCTATTGCTTTGCAGCTCTCACTGCTCCCGCTTGGGCTCTaGAGAGACGGAGCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: SRQRSRSQDMAIALQLSLLPLGL*RDGAVR
Trigger: CCTGACTGCTCCGTCTCTCCAGAGCCCAAGCGGGAG...CAGTGAGAGCTGCAAAGCAATAGCCATGTCCTGGGACCGACTCCGCTGCCGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp AGTCGGCAGCGGAGTCGGTCCCAGGACATGGCTATTGCTTTGCAGCTCTCACTGCACCACTCTCCCGCTTaGGCTCTGGAGAGACGGAGC +
Preference number: 4 (lower is better)
Translates to: SRQRSRSQDMAIALQLSLHHSPA*ALERRS
Trigger: GCTCCGTCTCTCCAGAGCCCAAGCGGGAGAGTGGTG...CAGTGAGAGCTGCAAAGCAATAGCCATGTCCTGGGACCGACTCCGCTGCCGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR TCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAGCTGCGCGTTCATCGTaGTCCGGGCGAGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRAARSS*SGRAGG
Trigger: GCCGCCTGCTCGCCCGGATCACGATGAACGCGCAGC...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp AGCGTCCTAACCCTTACAACTCGTCTGTGCTACACACCCACCGCCCAATGGCTCGCTGGGAGTTGTGGATaGTGCCCAGACCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SVLTLTTRLCYTPTAQWLAGSCG*CPDRSW
Trigger: CCAGCTCCGGTCTGGGCAGCATCCACAACTCCCAGC...GAGCCATTGGGCGGTGGGTGTGTAGCACAGACGAGTTGTAAGGGTTAGGACGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp GCTCGCGGGCAGCCCACGGGTGGAGATATGGTGCCGGTAGCACAAGAGCCTCAATGTGTCAGAGGTACCTaGGAGGAACATTTGCGTGCG +
Preference number: 4 (lower is better)
Translates to: ARGQPTGGDMVPVAQEPQCVRGT*EEHLRA
Trigger: CGCACGCAAATGTTCCTCGCAGGTACCTCTGACACA...TTGAGGCTCTTGTGCTACCGGCACCATATCTCCACCCGTGGGCTGCCCGCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp GAAATCCCCGGTGGGGTTCGGGCTGGGCTCAGCTTTCTTCTCTGCCTATCCGCGAGGGTTTTGACCCTCTaGAACAGGCTGCCGGCAACT +
Preference number: 4 (lower is better)
Translates to: EIPGGVRAGLSFLLCLSARVLTL*NRLPAT
Trigger: AGTTGCCGGCAGCCTGTTGCAGAGGGTCAAAACCCT...CGCGGATAGGCAGAGAAGAAAGCTGAGCCCAGCCCGAACCCCACCGGGGATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp TGCGAGGAACATTTGCGTGCGATTCCACGCACGCGTTGCATCCCTCTTCCCAAAAGCATGGCCGGGTGGTaGGCTTCGAAGCCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: CEEHLRAIPRTRCIPLPKSMAGW*ASKPLG
Trigger: CCCCAACGGCTTCGAAGCCCACCACCCGGCCATGCT...TTTGGGAAGAGGGATGCAACGCGTGCGTGGAATCGCACGCAAATGTTCCTCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTATGGTCATGGTGGGATaGAGGGGGCCGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAMVMVG*RGPARL
Trigger: CAGCCTGGCCGGCCCCCTGCATCCCACCATGACCAT...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp TCCAGCCCAGCGCCTGGGATGTGTCAGAGGTACCTGCGAGGAACATTTGCGTGCCCACAGCCAATTCCATaGGCAGAGAGCGTCCTAACC +
Preference number: 4 (lower is better)
Translates to: SSPAPGMCQRYLRGTFACPQPIP*AESVLT
Trigger: GGTTAGGACGCTCTCTGCGCATGGAATTGGCTGTGG...GCACGCAAATGTTCCTCGCAGGTACCTCTGACACATCCCAGGCGCTGGGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGACGCAGGCCATGGTCATaGTGGGATGCAGGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRRRPWS*WDAGGR
Trigger: CCGGCCCCCTGCATCCCACCATGACCATGGCCTGCG...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTAGGTGGGCGTGGGGATaGTGCGGAGGAAGGCCGTTG +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPARWAWG*CGGRPL
Trigger: CAACGGCCTTCCTCCGCACCATCCCCACGCCCACCT...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAAGTTGCCCGTGGCCCTaGGCGTTCAGGTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRSCPWP*AFRWAW
Trigger: CCACGCCCACCTGAACGCCCAGGGCCACGGGCAACT...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGACCCAGGAGTTGCCCGTaGCCCTGGGCGTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRPRSCP*PWAFRW
Trigger: CCACCTGAACGCCCAGGGCCACGGGCAACTCCTGGG...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp AACTCGTCTGTGCTACACACCCACCGCCCAATGGCTCTGAAACTTTTTGCCCATTCCGAGAGGGTCCCCTaGGAGCGGCAGAGCACCCTC +
Preference number: 4 (lower is better)
Translates to: NSSVLHTHRPMALKLFAHSERVP*ERQSTL
Trigger: GAGGGTGCTCTGCCGCTCCCAGGGGACCCTCTCGGA...ATGGGCAAAAAGTTTCAGAGCCATTGGGCGGTGGGTGTGTAGCACAGACGAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR TCA 90 bp CAGCGCCTGGGATGTGTCAGAGGTACCTGCGAGGAACATTTGCGTGCGATTCCACGTGCAAGAGGGTTTTaGCCCTCTGCAACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QRLGCVRGTCEEHLRAIPRARGF*PSATGC
Trigger: GCAGCCTGTTGCAGAGGGTCAAAACCCTCTTGCACG...TGGAATCGCACGCAAATGTTCCTCGCAGGTACCTCTGACACATCCCAGGCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAAGCTACCGCTCACGTTaGCCGCCAGGCGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRSYRSR*PPGAGG
Trigger: ACCACCAGCGCCTGGCGGGCAACGTGAGCGGTAGCT...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTAGAGGCTCTGGCCCATaGCGGCCACGTCCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPARGSGP*RPRPCG
Trigger: ACCACAAGGACGTGGCCGGCATGGGCCAGAGCCTCT...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTTCCAGGGTTTGGGGTTaGGCAGCAGGTCCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPASRVWG*AAGPRG
Trigger: CCCTCTCGGACCTGCTGCGCAACCCCAAACCCTGGA...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAAGCGGAGCGCGGACATaGGCTGGAACTCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRSGART*AGTPAP
Trigger: AGGAGCCGGAGTTCCAGCGCATGTCCGCGCTCCGCT...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAAGCATGGCCGGGTGGTaGGCTTCGAAGCCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRSMAGW*ASKPLG
Trigger: CCCCAACGGCTTCGAAGCCCACCACCCGGCCATGCT...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGACCGAGCATGGCCGGGTaGTGGGCTTCGAAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRPSMAG*WASKPL
Trigger: CAACGGCTTCGAAGCCCACCACCCGGCCATGCTCGG...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp AACTCGTCTGTGCTACACACCCACCGCCCAATGGCTCTGAAACTTTTTGCCCATCAGGCTGCCGGCAACTaGAGGACAGAGGGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: NSSVLHTHRPMALKLFAHQAAGN*RTEGRG
Trigger: TCCACGCCCCTCTGTCCTCCAGTTGCCGGCAGCCTG...ATGGGCAAAAAGTTTCAGAGCCATTGGGCGGTGGGTGTGTAGCACAGACGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR CAA 72 bp CTGCGAGGAACATTTGCGTGCGATTCCACGCACGCGTaGCATCCCTCTTCCCAAACCCGGATCGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: LRGTFACDSTHA*HPSSQTRIAEL
Trigger: CAGTTCAGCGATCCGGGTTTGGGAAGAGGGATGCAACGCGTGCGTGGAATCGCACGCAAATGTTCCTCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
3UTR CAA 72 bp CGCCTGGGATGTGTCAGAGGTACCTGCGAGGAACATTaGCGTGCGATTCCACGCACGCGTTGCATCCCTCTT +
Preference number: 4 (lower is better)
Translates to: RLGCVRGTCEEH*RAIPRTRCIPL
Trigger: AAGAGGGATGCAACGCGTGCGTGGAATCGCACGCAAATGTTCCTCGCAGGTACCTCTGACACATCCCAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR TCA 90 bp AACTCGTCTGTGCTACACACCCACCGCCCAATGGCTCTGAAACTTTTTGCCCATCCAGCGCCAAAAGAATaGGCGCGGGAGGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: NSSVLHTHRPMALKLFAHPAPKE*AREGVT
Trigger: TGTGACCCCCTCCCGCGCTCATTCTTTTGGCGCTGG...ATGGGCAAAAAGTTTCAGAGCCATTGGGCGGTGGGTGTGTAGCACAGACGAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACGTTGGGAGAGCGCAGTaGCCCAGCCCGCCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHVGRAQ*PSPPAS
Trigger: CGAGGCGGGCGGGCTGGGGCACTGCGCTCTCCCAAC...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGACTTCCATTGCTGACCTaGGCGCCGGTCACCGAAGGG +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRLPLLT*APVTEG
Trigger: CCCTTCGGTGACCGGCGCGCAGGTCAGCAATGGAAG...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp GATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACTTGTCCAGACTCCTCTGCCTGAATTGGAGCTaGCCTCGTCCTGCCACTTGT +
Preference number: 4 (lower is better)
Translates to: DELPELELPSSCHLSRLLCLNWS*PRPATC
Trigger: ACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCA...GAGGAGTCTGGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR GCA 90 bp CTTGGGGTTTCGGGCAGGAGACCTCTGCTCCTAGACTTGGGGGTCATTTACACAGAGTGTCTCACCAGGTaGGGGGATTTCTCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: LGVSGRRPLLLDLGVIYTECLTR*GDFSPP
Trigger: AGGCGGAGAGAAATCCCCGCACCTGGTGAGACACTC...TGTGTAAATGACCCCCAAGTCTAGGAGCAGAGGTCTCCTGCCCGAAACCCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTCGCCGATCGCTTCCATaGTCAGCTGCGCGTTCATCG +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPARRSLP*SAARSS
Trigger: CGATGAACGCGCAGCTGACCATGGAAGCGATCGGCG...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTGGGCATGCTCATACCTaGGGGAGTCTCGCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAGHAHT*GSLAGH
Trigger: ATGGCCTGCGAGACTCCCCCAGGTATGAGCATGCCC...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTCCTTGCTGGGAGTTGTaGATGCTGCCCAGACCGGAG +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAPCWEL*MLPRPE
Trigger: CTCCGGTCTGGGCAGCATCCACAACTCCCAGCAAGG...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp CTTGGGGTTTCGGGCAGGAGACCTCTGCTCCTAGACTTGGGGGTCATTTACACACTTTGCAGCTCTCACTaGGACCTTGGGACGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LGVSGRRPLLLDLGVIYTLCSSH*DLGTVS
Trigger: GCTGACCGTCCCAAGGTCCCAGTGAGAGCTGCAAAG...TGTGTAAATGACCCCCAAGTCTAGGAGCAGAGGTCTCCTGCCCGAAACCCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp GTAGCACAAGAGCCTCAAGGGTCGCCGAATCCTCCTGAAATCCCCGGTGGGGTTGTCGGTCCCAGGACATaGCTATTGCTTTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VAQEPQGSPNPPEIPGGVVGPRT*LLLCSS
Trigger: AGAGCTGCAAAGCAATAGCCATGTCCTGGGACCGAC...AACCCCACCGGGGATTTCAGGAGGATTCGGCGACCCTTGAGGCTCTTGTGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp GCCTGGGATGTGTCAGAGGTACCTGCGAGGAACATTTGCGTGCGATTCCACGCAGAACTCAGAAACACCTaGGGCTTGGGGTTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: AWDVSEVPARNICVRFHAELRNT*GLGFRA
Trigger: TGCCCGAAACCCCAAGCCCCAGGTGTTTCTGAGTTC...TGCGTGGAATCGCACGCAAATGTTCCTCGCAGGTACCTCTGACACATCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR TCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTAATTACTTCCATTGCTaGCCTGCGCGCCGGTCACCG +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPANYFHC*PARRSP
Trigger: CGGTGACCGGCGCGCAGGTCAGCAATGGAAGTAATT...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACCCAGCAGGGACGCCATaGCCATGGAGCGCGGGTGCG +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHPAGTP*PWSAGA
Trigger: CGCACCCGCGCTCCATGGGCATGGCGTCCCTGCTGG...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACAATCTCCGCCGCCGCTaGCGCCGTCCAGCAGGGACG +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHNLRRR*RRPAGT
Trigger: CGTCCCTGCTGGACGGCGGCAGCGGCGGCGGAGATT...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAGGGAGTTGTGGATGCTaGCCAGACCGGAGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRGSCGC*PDRSWR
Trigger: TCTCCAGCTCCGGTCTGGGCAGCATCCACAACTCCC...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp GGCAGGAGACCTCTGCTCCTAGACTTGGGGGTCATTTACACACTCTCATCCCCAATTCCACGCACGCGTTaGATCCCTCTTCCCAAACCC +
Preference number: 4 (lower is better)
Translates to: GRRPLLLDLGVIYTLSSPIPRTR*IPLPKP
Trigger: GGGTTTGGGAAGAGGGATGCAACGCGTGCGTGGAAT...TGGGGATGAGAGTGTGTAAATGACCCCCAAGTCTAGGAGCAGAGGTCTCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp TGCGAGGAACATTTGCGTGCGATTCCACGCACGCGTTGCATCCCTCTTCCCAAACGAGGAACATTTGCGTaGGATTCCACGCACGCGTTG +
Preference number: 4 (lower is better)
Translates to: CEEHLRAIPRTRCIPLPKRGTFA*DSTHAL
Trigger: CAACGCGTGCGTGGAATCGCACGCAAATGTTCCTCG...TTTGGGAAGAGGGATGCAACGCGTGCGTGGAATCGCACGCAAATGTTCCTCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTAGGTGGTGTAGGTGGTaGGCATGCTCATACCTGGGG +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPARWCRW*ACSYLG
Trigger: CCCCAGGTATGAGCATGCCCACCACCTACACCACCT...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTGCTGCTGGCGACTGTTaGCTTCCTTCCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAAAGDC*LPSSHC
Trigger: ACAGTGAGAGGAAGGAAGGCAACAGTCGCCAGCAGC...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTGCTCATCATTTGTCTTaGCAAGTCGCCGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAAHHLS*QVAALL
Trigger: CAGCAGGGCGGCGACTTGGCAAGACAAATGATGAGC...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp AGTCGGCAGCGGAGTCGGTCCCAGGACATGGCTATTGCTTTGCAGCTCTCACTGACATGGCTATTGCTTTaGAGCTCTCACTGGGACCTT +
Preference number: 4 (lower is better)
Translates to: SRQRSRSQDMAIALQLSLTWLLL*SSHWDL
Trigger: AAGGTCCCAGTGAGAGCTGCAAAGCAATAGCCATGT...CAGTGAGAGCTGCAAAGCAATAGCCATGTCCTGGGACCGACTCCGCTGCCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp CTTGGGGTTTCGGGCAGGAGACCTCTGCTCCTAGACTTGGGGGTCATTTACACACCAGGACATGGCTATTaGTTTGCAGCTCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: LGVSGRRPLLLDLGVIYTPGHGY*FAALTG
Trigger: CCCAGTGAGAGCTGCAAAGCAATAGCCATGTCCTGG...TGTGTAAATGACCCCCAAGTCTAGGAGCAGAGGTCTCCTGCCCGAAACCCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp AACTCGTCTGTGCTACACACCCACCGCCCAATGGCTCTGAAACTTTTTGCCCATCTCAGCTTTCTTCTCTaGCTATCCGCGGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: NSSVLHTHRPMALKLFAHLSFLL*LSAVSG
Trigger: CCCCGAGACCGCGGATAGGCAGAGAAGAAAGCTGAG...ATGGGCAAAAAGTTTCAGAGCCATTGGGCGGTGGGTGTGTAGCACAGACGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR GCA 90 bp GGCAGGAGACCTCTGCTCCTAGACTTGGGGGTCATTTACACACTCTCATCCCCAAAACACAGCGCCACGTaGAAGAGGGTTTTGACCCTC +
Preference number: 4 (lower is better)
Translates to: GRRPLLLDLGVIYTLSSPKHSAT*KRVLTL
Trigger: GAGGGTCAAAACCCTCTTGCACGTGGCGCTGTGTTT...TGGGGATGAGAGTGTGTAAATGACCCCCAAGTCTAGGAGCAGAGGTCTCCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTCTTCACATCGGCTGCTaGCGACTGTTGCCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPALHIGC*RLLPSF
Trigger: GAAGGAAGGCAACAGTCGCCAGCAGCCGATGTGAAG...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAACTTGTCCGAGACTGTaGAGATGGGAGGCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRTCPRL*RWEAAA
Trigger: AGCCGCTGCCTCCCATCTCCACAGTCTCGGACAAGT...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACTCTTGTCGGTGGGCATaGCGGCCCCCGGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHSCRWA*RPPGGH
Trigger: ATGCCCACCCGGGGGCCGCCATGCCCACCGACAAGA...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACCCCTGGGCGTTCAGGTaGGCGTGGGGATGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHPWAFR*AWGWCG
Trigger: TCCGCACCATCCCCACGCCCACCTGAACGCCCAGGG...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACCGGTCACCGAAGGGTTaGGCTCCCGGGCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHRSPKG*APGLCP
Trigger: TGGGCACAGCCCGGGAGCCCAACCCTTCGGTGACCG...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACTCCGAGAGGGTCCCCTaGGAGCGGCAGAGCACCCTC +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHSERVP*ERQSTL
Trigger: GAGGGTGCTCTGCCGCTCCCAGGGGACCCTCTCGGA...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR TCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAACGGCCGAGGTGGGCGTaGGGTGCTGCTCCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: QRECTGLGVIQIFFAGFERPRWA*GAAPRG
Trigger: GCCACGGGGAGCAGCACCTCACGCCCACCTCGGCCG...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR TCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTGACGCTGGACATCTGTaGAGACCAACCTGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPADAGHL*RPTWAF
Trigger: AAAAGCCCAGGTTGGTCTTCACAGATGTCCAGCGTC...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGATGTAGGTGGTGGGCATaGTCATACCTGGGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRCRWWA*SYLGES
Trigger: AGACTCCCCCAGGTATGAGCATGCCCACCACCTACA...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACCGGCAGAGCACCCTCTaGGCGAAGATGGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHRQSTL*AKMACG
Trigger: CCCACAGGCCATCTTCGCGCAGAGGGTGCTCTGCCG...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGATGCCTGAATTGGAGCTaGCCTCGTCCTGCCACTTGT +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRCLNWS*PRPATC
Trigger: ACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCA...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACTGCCCAGACCGGAGCTaGAGAGGGGCGAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHCPDRS*RGARGS
Trigger: AGAGCCTCTCGCCCCTCTCCAGCTCCGGTCTGGGCA...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp TGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACTATGAGTTGCCTGAATTaGAGCTGCCCTCGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: CLMKKMSCLNWSCPRPATMSCLN*SCPRPA
Trigger: GGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCAT...AGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
3UTR CAA 72 bp AGGTGTGAGATCCAGTGGTGTTTTCCTGCTCATCATTaGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RCEIQWCFPAHH*SCQVAALLKCV
Trigger: CACACACTTCAGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATCTCACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR TCA 90 bp GATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACTTGTCCAGAAACCGTCGATTCTaGATATCCCGTGGCGGCATA +
Preference number: 4 (lower is better)
Translates to: DEEDELPELELPSSCHLSRNRRF*ISRGGI
Trigger: TATGCCGCCACGGGATATTCAGAATCGACGGTTTCT...GGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR GCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACTCATGGCTCACCCCGTaGAGCTCGCCGATCGCTTCC +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHSWLTP*SSPIAS
Trigger: GGAAGCGATCGGCGAGCTGCACGGGGTGAGCCATGA...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAGTGGGCGTGAGGTGCTaGTCCCCGTGGCGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEVGVRC*SPWRPS
Trigger: GCTCGGCCGCCACGGGGAGCAGCACCTCACGCCCAC...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp GATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACTTGTCCAGACTCCTCACAGAAATTGCAAGATaGCCTCTAGACAACTCCCAG +
Preference number: 4 (lower is better)
Translates to: DELPELELPSSCHLSRLLTEIAR*PLDNSQ
Trigger: CTGGGAGTTGTCTAGAGGGCATCTTGCAATTTCTGT...GAGGAGTCTGGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR GCA 90 bp TGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACTTTCAGTCGCAGAATCTaGAGCGAGCACAGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: CLMKKMSCLNWSCPRPATFSRRI*SEHRGH
Trigger: GTGACCTCTGTGCTCGCTGCAGATTCTGCGACTGAA...AGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR GCA 90 bp AACTCGTCTGTGCTACACACCCACCGCCCAATGGCTCTGAAACTTTTTGCCCATCTTACAACTCGTCTGTaGTACACACCCACCGCCCAA +
Preference number: 4 (lower is better)
Translates to: NSSVLHTHRPMALKLFAHLTTRL*YTPTAQ
Trigger: TTGGGCGGTGGGTGTGTAGCACAGACGAGTTGTAAG...ATGGGCAAAAAGTTTCAGAGCCATTGGGCGGTGGGTGTGTAGCACAGACGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTTATAGAGGTTATTCATaGAGGCCAGCCCGCGCTCAT +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAYRGYS*RPARAH
Trigger: ATGAGCGCGGGCTGGCCTCCATGAATAACCTCTATA...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACTGGGGGAGCCCTTGCTaGGAGTTGTGGATGCTGCCC +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHWGSPC*ELWMLP
Trigger: GGGCAGCATCCACAACTCCCAGCAAGGGCTCCCCCA...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp GATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACTTGTCCCCAACCTGGGCTTTTTaGGTGTGTTGCCTCTATCCT +
Preference number: 4 (lower is better)
Translates to: DEEDELPELELPSSCHLSPTWAF*VCCLYP
Trigger: AGGATAGAGGCAACACACCCAAAAAGCCCAGGTTGG...GGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR TCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGATCTTTCTTAAAATTCTaGGGTCTCCGGCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRSFLKF*GLRLPC
Trigger: GCAGGGGAGCCGGAGACCTCAGAATTTTAAGAAAGA...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR TCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAGCGGAGGAAGGCCGTTaGTGGGCACCATGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEAEEGR*WAPCRP
Trigger: CGGCCGGCATGGTGCCCATCAACGGCCTTCCTCCGC...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTCTTGTTCTTTCCTTTTaGATGCTGCTAAGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPALVLSF*MLLSGA
Trigger: CGCTCCGCTTAGCAGCATGCAAAAGGAAAGAACAAG...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp GATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACTTGTCCAGACTCCTCTGGGAAATGGTGATTTaGAATTCTTTGGATGGACGC +
Preference number: 4 (lower is better)
Translates to: DELPELELPSSCHLSRLLWEMVI*NSLDGR
Trigger: GCGTCCATCCAAAGAATTGCAAATCACCATTTCCCA...GAGGAGTCTGGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACGACACAACATCGATGTaGCCAGGCAGAGGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHDTTSM*PGRGGE
Trigger: CTCGCCGCCTCTGCCTGGCCACATCGATGTTGTGTC...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACGAGTCTCGCAGGCCATaGTCATGGTGGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHESRRP*SWWDAG
Trigger: CCCTGCATCCCACCATGACCATGGCCTGCGAGACTC...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAACGTGGCGGCCGAGCATaGCCGGGTGGTGGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: QRECTGLGVIQIFFAGFERGGRA*PGGGLR
Trigger: TCGAAGCCCACCACCCGGCCATGCTCGGCCGCCACG...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGACCAACCTGGGCTTTTTaGGTGTGTTGCCTCTATCCT +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRPTWAF*VCCLYP
Trigger: AGGATAGAGGCAACACACCCAAAAAGCCCAGGTTGG...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305901.7
3UTR CAA 72 bp GTACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATaGGAGCTGCCCTCGTCCTGCCACTTGTCCAGACTC +
Preference number: 4 (lower is better)
Translates to: VQVLDEEDELPE*ELPSSCHLSRL
Trigger: GAGTCTGGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR TCA 90 bp TGGTACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTGACGCTGGACATCTGTaGAGACCAACCTGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: WYKCLMKKMSCLNWSCPRDAGHL*RPTWAF
Trigger: AAAAGCCCAGGTTGGTCTTCACAGATGTCCAGCGTC...ACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR TCA 90 bp GATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACTTGTCCGTTACAGGCAATCTTTaGAATAGCAAGGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: DEEDELPELELPSSCHLSVTGNL*NSKAGT
Trigger: AGTGCCTGCCTTGCTATTTCAAAGATTGCCTGTAAC...GGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR GCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACGGTCTTCACATCGGCTaGTGGCGACTGTTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHGLHIG*WRLLPS
Trigger: GGAAGGCAACAGTCGCCAGCAGCCGATGTGAAGACC...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAGCTGTGCCCAGGAGTTaGCCGTGGCCCTGGGCGTTC +
Preference number: 4 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEAVPRS*PWPWAF
Trigger: GAACGCCCAGGGCCACGGGCAACTCCTGGGCACAGC...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp GTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACCAGACTCCTCCTTCTTaGGTTCATGAAGAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: VLDEEDELPELELPSSCHQTPPS*VHEEVA
Trigger: AGCAACTTCTTCATGAACGCAAGAAGGAGGAGTCTG...GTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR GCA 90 bp GTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACATGAAGAAGATGAGTTaGCTGAATTGGAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: VLDEEDELPELELPSSCHMKKMS*LNWSCP
Trigger: AGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCAT...GTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR GCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAAATCTGCATTTAGGTTaGGGGCCTGGCAGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRNLHLG*GPGRFK
Trigger: TTTGAACCTGCCAGGCCCGCAACCTAAATGCAGATT...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp GATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACTTGTCCAGACTCCTCGTGTTTGACAGAAATTaGAAGATGCCCTCTAGACAA +
Preference number: 4 (lower is better)
Translates to: DELPELELPSSCHLSRLLVFDRN*KMPSRQ
Trigger: TTGTCTAGAGGGCATCTTGCAATTTCTGTCAAACAC...GAGGAGTCTGGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAGAGGATCCGCGCCGTTaGGAGAGCGCAGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEEDPRR*ESAVPQ
Trigger: CTGGGGCACTGCGCTCTCCCAACGGCGCGGATCCTC...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp GATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACTTGTCCAGACTCCTCTCTTCCTTCATGCTTTaGTACAAGTGCTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: DELPELELPSSCHLSRLLSSFML*YKCLMK
Trigger: CTTCATCAAGCACTTGTACCAAAGCATGAAGGAAGA...GAGGAGTCTGGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGACACCATACACCTTCGTaGCATGGTAGAACAGATGAG +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRHHTPS*HGRTDE
Trigger: CTCATCTGTTCTACCATGCCACGAAGGTGTATGGTG...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR TCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTAAGTCAGAATGCAGGTaGGCTAAGTCTTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAKSECR*AKSLVS
Trigger: AGAAACCAAAGACTTAGCTCACCTGCATTCTGACTT...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR TCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACAAGTCGCCGCCCTGCTaGAGTGTGTGTCTCCAAACA +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHKSPPC*SVCLQT
Trigger: TGTTTGGAGACACACACTTCAGCAGGGCGGCGACTT...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR TCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAACACTCCTAATCCAATaGACTCAGACAACCCCATAC +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRTLLIQ*TQTTPY
Trigger: GTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGT...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR TCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAGACATTTATGGATCCTaGAAAGGAGTGTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRDIYGS*KGVCHL
Trigger: CAGATGGCACACTCCTTTTCAGGATCCATAAATGTC...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAGCTTTTTGGGTGTGTTaGCTCTATCCTTCCCATGTT +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRAFWVC*LYPSHV
Trigger: AACATGGGAAGGATAGAGGCAACACACCCAAAAAGC...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGACAGACTCCTCCTTCTTaGGTTCATGAAGAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRQTPPS*VHEEVA
Trigger: AGCAACTTCTTCATGAACGCAAGAAGGAGGAGTCTG...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAATGAAGAAGATGAGTTaGCTGAATTGGAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRMKKMS*LNWSCP
Trigger: AGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCAT...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTTTTCTCAGTTGCACCTaGTGTTTTGTTGACGTCCAA +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAFLSCT*CFVDVQ
Trigger: TTGGACGTCAACAAAACAGCAGGTGCAACTGAGAAA...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp GTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACAGATCAGAATGCCAATaGCTGAAGGTATGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: VLDEEDELPELELPSSCHRSECQ*LKVWED
Trigger: ATCTTCCCATACCTTCAGGCATTGGCATTCTGATCT...GTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAAGGCCATGGTCATGGTaGGATGCAGGGGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: QRECTGLGVIQIFFAGFERPWSW*DAGGRP
Trigger: TGGCCGGCCCCCTGCATCCCACCATGACCATGGCCT...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAGCGTTCAGGTGGGCGTaGGGATGGTGCGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEAFRWA*GWCGGR
Trigger: CCTTCCTCCGCACCATCCCCACGCCCACCTGAACGC...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp TGGTACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCAATGCCTGAAGGTATaGGAAGATCTGAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: WYKCLMKKMSCLNWSCPRQCLKV*EDLSPW
Trigger: CCAAGGGCTCAGATCTTCCCATACCTTCAGGCATTG...ACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CCA 90 bp ATGCTTTGGTACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCACAGAGGTCACTAGGTaGCGCGCTTCGCTCGTTTGT +
Preference number: 4 (lower is better)
Translates to: MLWYKCLMKKMSCLNWSCTEVTR*RASLVC
Trigger: ACAAACGAGCGAAGCGCGCCACCTAGTGACCTCTGT...GCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTACCAAAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR TCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAACGAAGCCGTTGGGGGTaGGCATCTTGTCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: QRECTGLGVIQIFFAGFERSRWG*ASCRWA
Trigger: TGCCCACCGACAAGATGCTCACCCCCAACGGCTTCG...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAGCTGGGAGTTGTGGATaGTGCCCAGACCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEAGSCG*CPDRSW
Trigger: CCAGCTCCGGTCTGGGCAGCATCCACAACTCCCAGC...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGACCATACCATGTTGGTTaGACTCCTATAGAACAACCA +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRPYHVG*TPIEQP
Trigger: TGGTTGTTCTATAGGAGTGCAACCAACATGGTATGG...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGACTGCATCGACCTCTCTaGCATGATATTAATTGCTTC +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRLHRPL*HDINCF
Trigger: GAAGCAATTAATATCATGGCAGAGAGGTCGATGCAG...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAATGGCTTGTTGGTTTTaGTTTACCTCTCTAGTTGCC +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRMACWF*FTSLVA
Trigger: GGCAACTAGAGAGGTAAAGCAAAACCAACAAGCCAT...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp GAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACTTGTCCAGACTCAAGCACATAGTTTATTaGGTTCCTTCGATAACCTCT +
Preference number: 4 (lower is better)
Translates to: EDELPELELPSSCHLSRLKHIVY*VPSITS
Trigger: AGAGGTTATCGAAGGAACGCAATAAACTATGTGCTT...GAGTCTGGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CCA 90 bp TTGGTACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTGTAGAGTTCGACGCTaGACATCTGTGAAGACCAAC +
Preference number: 4 (lower is better)
Translates to: LVQVLDEEDELPELELPSCRVRR*TSVKTN
Trigger: GTTGGTCTTCACAGATGTCCAGCGTCGAACTCTACA...CGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTCGAGGTTTTAGTTTGTaGTTCTTCCTTCATGCTTTG +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPARGFSL*FFLHAL
Trigger: CAAAGCATGAAGGAAGAACCACAAACTAAAACCTCG...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAAACCCCATACCATGTTaGTTGCACTCCTATAGAACA +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRNPIPC*LHSYRT
Trigger: TGTTCTATAGGAGTGCAACCAACATGGTATGGGGTT...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACTTTAGGTTGCGGGCCTaGCAGGTTCAAACGTTAGGC +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHFRLRA*QVQTLG
Trigger: GCCTAACGTTTGAACCTGCCAGGCCCGCAACCTAAA...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTGCTAGGAACAGATTATaGAACCATGTCTATCTCTCT +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAARNRL*NHVYLS
Trigger: AGAGAGATAGACATGGTTCCATAATCTGTTCCTAGC...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTAATGGGGTACTACTTTaGAAAGATCCTCAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPANGVLL*KDPQVF
Trigger: GAAAACCTGAGGATCTTTCCAAAGTAGTACCCCATT...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTGGGTGGCCATTTAAATaGTCTCTTTCAATAGCTGAA +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAGWPFK*SLSIAE
Trigger: TTCAGCTATTGAAAGAGACCATTTAAATGGCCACCC...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp CAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCGAAACACATGGTGACTaGAAACATGCAGTGTTTGAC +
Preference number: 4 (lower is better)
Translates to: QVLDEEDELPELELPSSCETHGD*KHAVFD
Trigger: GTCAAACACTGCATGTTTCCAGTCACCATGTGTTTC...GCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR TCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGACACCTGCTGTTTTGTTaGCGTCCAAGTCATAAAATT +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRHLLFC*RPSHKI
Trigger: AATTTTATGACTTGGACGTCAACAAAACAGCAGGTG...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACGATGTACACGTGTACTaGATCGACCTCTCTGCCATG +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHDVHVY*IDLSAM
Trigger: CATGGCAGAGAGGTCGATGCAGTACACGTGTACATC...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp TACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTAAGTGCAGATCAGAATaGCAATGCCTGAAGGTATGG +
Preference number: 4 (lower is better)
Translates to: YKCLMKKMSCLNWSCPRPKCRSE*QCLKVW
Trigger: CCATACCTTCAGGCATTGGCATTCTGATCTGCACTT...AGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR GCA 90 bp TGGTACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTGCCAAGAAGTGTAATTaGTGTCCAAGTGCAGATCAG +
Preference number: 4 (lower is better)
Translates to: WYKCLMKKMSCLNWSCPRAKKCN*CPSADQ
Trigger: CTGATCTGCACTTGGACAGCAATTACACTTCTTGGC...ACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAGCAGAGGGGTCAAGGTaGTGTAGGTGGTGGGCATGC +
Preference number: 4 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEAEGSR*CRWWAC
Trigger: GCATGCCCACCACCTACACCACCTTGACCCCTCTGC...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACCAAGCACAGCGAGGATaGTCATGGATTGAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHQAQRG*SWIEGV
Trigger: CACACCTTCAATCCATGACCATCCTCGCTGTGCTTG...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp TGGTACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTATTCTGAATATCCCGTaGCGGCATATGCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: WYKCLMKKMSCLNWSCPRILNIP*RHMQRK
Trigger: CTTCCTTTGCATATGCCGCCACGGGATATTCAGAAT...ACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
3UTR CAA 72 bp TCGACAGCAGACATGAAGGAGACACAGATAGATGGCTaGTTGGTTTTGCTTTACCTCTCTAGTTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: STADMKETQIDG*LVLLYLSSCLP
Trigger: AGGCAGGCAACTAGAGAGGTAAAGCAAAACCAACAAGCCATCTATCTGTGTCTCCTTCATGTCTGCTGTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR TCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACCTCTTCCATCTGCCCTaGATTACTTCCATTGCTGAC +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHLFHLP*ITSIAD
Trigger: GTCAGCAATGGAAGTAATTCAGGGCAGATGGAAGAG...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR TCA 90 bp TACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGAAACATGCAGTGTTTaGCAGAAATTGCAAGATGCC +
Preference number: 4 (lower is better)
Translates to: YKCLMKKMSCLNWSCPRPETCSV*QKLQDA
Trigger: GGCATCTTGCAATTTCTGTCAAACACTGCATGTTTC...AGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR GCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAGCTTCCATGGTCAGCTaGGCGTTCATCGTGATCCGG +
Preference number: 4 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEASMVS*AFIVIR
Trigger: CCGGATCACGATGAACGCGCAGCTGACCATGGAAGC...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTAACAAACAAAGAGAATaGACTGGTTTAGGTGTCATT +
Preference number: 4 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPANKQRE*TGLGVI
Trigger: AATGACACCTAAACCAGTGCATTCTCTTTGTTTGTT...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGATGGTTGTCTGAATTCTaGTATTCTTTTCTTGGGGTA +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRWLSEF*YSFLGV
Trigger: TACCCCAAGAAAAGAATAGCAGAATTCAGACAACCA...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACTGTAGAGTTCGACGCTaGACATCTGTGAAGACCAAC +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHCRVRR*TSVKTN
Trigger: GTTGGTCTTCACAGATGTCCAGCGTCGAACTCTACA...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp TGGTACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTTCGATAACCTCTCTTTaGGACTATGAGATCATCACC +
Preference number: 4 (lower is better)
Translates to: WYKCLMKKMSCLNWSCPRSITSL*DYEIIT
Trigger: GGTGATGATCTCATAGTCCCAAAGAGAGGTTATCGA...ACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
3UTR CAA 72 bp ACAGCAGACATGAAGGAGACACAGATAGATGGCTTGTaGGTTTTGCTTTACCTCTCTAGTTGCCTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: TADMKETQIDGL*VLLYLSSCLPV
Trigger: AACAGGCAGGCAACTAGAGAGGTAAAGCAAAACCAACAAGCCATCTATCTGTGTCTCCTTCATGTCTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR TCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACTTTCTGGGAATCAAGTaGTTCACTGGGGTACCACTA +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHFLGIK*FTGVPL
Trigger: TAGTGGTACCCCAGTGAATCACTTGATTCCCAGAAA...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp ATGCTTTGGTACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCGCTTTTTGGGTGTGTTaGCTCTATCCTTCCCATGTT +
Preference number: 4 (lower is better)
Translates to: MLWYKCLMKKMSCLNWSCAFWVC*LYPSHV
Trigger: AACATGGGAAGGATAGAGGCAACACACCCAAAAAGC...GCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTACCAAAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAATGAGTTGCCTGAATTaGAGCTGCCCTCGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEMSCLN*SCPRPA
Trigger: GGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCAT...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp TGGTACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCGAGGTTTTAGTTTGTaGTTCTTCCTTCATGCTTTG +
Preference number: 4 (lower is better)
Translates to: WYKCLMKKMSCLNWSCPRRGFSL*FFLHAL
Trigger: CAAAGCATGAAGGAAGAACCACAAACTAAAACCTCG...ACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAACAAAGAGAATGCACTaGTTTAGGTGTCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRTKRMH*FRCHSN
Trigger: ATTTGAATGACACCTAAACCAGTGCATTCTCTTTGT...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGATGTTTTGTGTCAAGATaGTTCAGTTTTGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRCFVSR*FSFVLW
Trigger: CCAAAGAACAAAACTGAACCATCTTGACACAAAACA...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR TCA 90 bp ATGCTTTGGTACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCATGAGAAACACATGGTaGCTGGAAACATGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: MLWYKCLMKKMSCLNWSCMRNTW*LETCSV
Trigger: AACACTGCATGTTTCCAGTCACCATGTGTTTCTCAT...GCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTACCAAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR GCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACTGGGAAATGGTGATTTaGAATTCTTTGGATGGACGC +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHWEMVI*NSLDGR
Trigger: GCGTCCATCCAAAGAATTGCAAATCACCATTTCCCA...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp TGGTACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTATGCTTTGGTACAAGTaGTTGATGAAGAAGATGAGT +
Preference number: 4 (lower is better)
Translates to: WYKCLMKKMSCLNWSCPRMLWYK*LMKKMS
Trigger: ACTCATCTTCTTCATCAAGCACTTGTACCAAAGCAT...ACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR GCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACGGCTCAAAATCACTATaGTCCAAACCACTAAACAGC +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHGSKSL*SKPLNS
Trigger: GCTGTTTAGTGGTTTGGAGCATAGTGATTTTGAGCC...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACAAGATGTCCGCTCAATaGCTCAAAATCACTATGCTC +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHKMSAQ*LKITML
Trigger: GAGCATAGTGATTTTGAGCCATTGAGCGGACATCTT...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACGAAGGCAGAATGCTTTaGAGGCTATTCTTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHEGRML*RLFLVP
Trigger: TGGAACTAAGAATAGCCTCCAAAGCATTCTGCCTTC...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACTCTTCCTTCATGCTTTaGTACAAGTGCTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHSSFML*YKCLMK
Trigger: CTTCATCAAGCACTTGTACCAAAGCATGAAGGAAGA...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAACAGCGAGGATGGTCATaGATTGAAGGTGTGAGATCC +
Preference number: 4 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEQRGWS*IEGVRS
Trigger: GGATCTCACACCTTCAATCCATGACCATCCTCGCTG...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACAATCAAGTGATTCACTaGGGTACCACTAATACGACT +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHNQVIH*GTTNTT
Trigger: AGTCGTATTAGTGGTACCCCAGTGAATCACTTGATT...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACGGAGACACAGATAGATaGCTTGTTGGTTTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHGDTDR*LVGFAL
Trigger: TAAAGCAAAACCAACAAGCCATCTATCTGTGTCTCC...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR TCA 90 bp ATGCTTTGGTACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCATAAACCTGCTATCTTaGGGTCCTGGTCTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: MLWYKCLMKKMSCLNWSCINLLS*GPGLLK
Trigger: TTTTAAAAGACCAGGACCTCAAGATAGCAGGTTTAT...GCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTACCAAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR GCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACATGCTTTGGTACAAGTaGTTGATGAAGAAGATGAGT +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHMLWYK*LMKKMS
Trigger: ACTCATCTTCTTCATCAAGCACTTGTACCAAAGCAT...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACTGCCATGATATTAATTaGTTCCCTGAAGCTACATTC +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHCHDIN*FPEATF
Trigger: GAATGTAGCTTCAGGGAAGCAATTAATATCATGGCA...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAAAGGAGTGTGCCATCTaGATGTACACGTGTACTGCA +
Preference number: 4 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEKECAI*MYTCTA
Trigger: TGCAGTACACGTGTACATCCAGATGGCACACTCCTT...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACCAGAGAGAATTTTTCTaGGAATCAAGTGATTCACTG +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHQREFF*ESSDSL
Trigger: CAGTGAATCACTTGATTCCCAGAAAAATTCTCTCTG...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAACCACCATTTCTCAGTTaGACCTGCTGTTTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEPPFLS*TCCFVD
Trigger: GTCAACAAAACAGCAGGTGCAACTGAGAAATGGTGG...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR GCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAACTTTACCTCTCTAGTTaGCTGCCTGTTACAGACCTA +
Preference number: 4 (lower is better)
Translates to: QRECTGLGVIQIFFAGFELYLSS*LPVTDL
Trigger: TAGGTCTGTAACAGGCAGGCAACTAGAGAGGTAAAG...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACCTGCTATTCTTTTCTTaGGGTATTGAATTTGGTAAG +
Preference number: 4 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHLLFFS*GIEFGK
Trigger: CTTACCAAATTCAATACCCCAAGAAAAGAATAGCAG...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR TCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAATAAACCTGCTATCTTaGGGTCCTGGTCTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEINLLS*GPGLLK
Trigger: TTTTAAAAGACCAGGACCTCAAGATAGCAGGTTTAT...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAGTAAATCTTGAAGGGTaGCCATTTAAATGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEVNLEG*PFKWSL
Trigger: AAGAGACCATTTAAATGGCCACCCTTCAAGATTTAC...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CCA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAGGTGAGCTAAGTCTTTaGTTTCTTTGGACTATAAAT +
Preference number: 4 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEGELSL*FLWTIN
Trigger: ATTTATAGTCCAAAGAAACCAAAGACTTAGCTCACC...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS GCA 90 bp GCAGGTGGCTGCCGCGGTGCGCCACGGAGCTGCGCGCGTGGGGGCTaGCGCCCAGCAGGTCGGCAGGGGCGGGCACCGGCTCATGGCTCA +
Preference number: 5 (lower is better)
Translates to: AGGCRGAPRSCARGG*RPAGRQGRAPAHGS
Trigger: TGAGCCATGAGCCGGTGCCCGCCCCTGCCGACCTGCTGGGCGGCAGCCCCCACGCGCGCAGCTCCGTGGCGCACCGCGGCAGCCACCTGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS GCA 90 bp GGTCTCCGGCTCCCCTGCCGCGGCCCGCGCGCCTGCCGCGTCTGCTaGCTGCCCGCCCCGCTGGCCAGCTTGAGCCATGGCTCTGTTACT +
Preference number: 5 (lower is better)
Translates to: GLRLPCRGPRACRVC*LPAPLASLSHGSVT
Trigger: AGTAACAGAGCCATGGCTCAAGCTGGCCAGCGGGGCGGGCAGGCAGCAGACGCGGCAGGCGCGCGGGCCGCGGCAGGGGAGCCGGAGACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS GCA 90 bp TGTGCTCAGGGGCCCGGTGGTGGTGGTGGTAATCTCCGCCGCCGCTaGCGCCGTCCAGCAGGGACGCCATGCCCATGGAGCGCGGGTGCG +
Preference number: 5 (lower is better)
Translates to: CAQGPGGGGGNLRRR*RRPAGTPCPWSAGA
Trigger: CGCACCCGCGCTCCATGGGCATGGCGTCCCTGCTGGACGGCGGCAGCGGCGGCGGAGATTACCACCACCACCACCGGGCCCCTGAGCACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS GCA 90 bp GCGCCGGTCACCGAAGGGTTGGGCTCCCGGGCTGTGCCCAGGAGTTaGCCGTGGCCCTGGGCGTTCAGGTGGGCGTGGGGATGGTGCGGA +
Preference number: 5 (lower is better)
Translates to: APVTEGLGSRAVPRS*PWPWAFRWAWGWCG
Trigger: TCCGCACCATCCCCACGCCCACCTGAACGCCCAGGGCCACGGGCAACTCCTGGGCACAGCCCGGGAGCCCAACCCTTCGGTGACCGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS TCA 90 bp GGCGGCCGAGCATGGCCGGGTGGTGGGCTTCGAAGCCGTTGGGGGTaGGCATCTTGTCGGTGGGCATGGCGGCCCCCGGGTGGGCATAGT +
Preference number: 5 (lower is better)
Translates to: GGRAWPGGGLRSRWG*ASCRWAWRPPGGHS
Trigger: ACTATGCCCACCCGGGGGCCGCCATGCCCACCGACAAGATGCTCACCCCCAACGGCTTCGAAGCCCACCACCCGGCCATGCTCGGCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS GCA 90 bp AGGAGTTGCCCGTGGCCCTGGGCGTTCAGGTGGGCGTGGGGATGGTaGGGAGGAAGGCCGTTGATGGGCACCATGCCGGCCGAGGTGGGC +
Preference number: 5 (lower is better)
Translates to: RSCPWPWAFRWAWGW*GGRPLMGTMPAEVG
Trigger: GCCCACCTCGGCCGGCATGGTGCCCATCAACGGCCTTCCTCCGCACCATCCCCACGCCCACCTGAACGCCCAGGGCCACGGGCAACTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS CCA 90 bp GTGGGCGTGAGGTGCTGCTCCCCGTGGCGGCCGAGCATGGCCGGGTaGTGGGCTTCGAAGCCGTTGGGGGTGAGCATCTTGTCGGTGGGC +
Preference number: 5 (lower is better)
Translates to: VGVRCCSPWRPSMAG*WASKPLGVSILSVG
Trigger: GCCCACCGACAAGATGCTCACCCCCAACGGCTTCGAAGCCCACCACCCGGCCATGCTCGGCCGCCACGGGGAGCAGCACCTCACGCCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS CCA 90 bp CCCAGGAGTTGCCCGTGGCCCTGGGCGTTCAGGTGGGCGTGGGGATaGTGCGGAGGAAGGCCGTTGATGGGCACCATGCCGGCCGAGGTG +
Preference number: 5 (lower is better)
Translates to: PRSCPWPWAFRWAWG*CGGRPLMGTMPAEV
Trigger: CACCTCGGCCGGCATGGTGCCCATCAACGGCCTTCCTCCGCACCATCCCCACGCCCACCTGAACGCCCAGGGCCACGGGCAACTCCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS CCA 90 bp GCTGTGCCCAGGAGTTGCCCGTGGCCCTGGGCGTTCAGGTGGGCGTaGGGATGGTGCGGAGGAAGGCCGTTGATGGGCACCATGCCGGCC +
Preference number: 5 (lower is better)
Translates to: AVPRSCPWPWAFRWA*GWCGGRPLMGTMPA
Trigger: GGCCGGCATGGTGCCCATCAACGGCCTTCCTCCGCACCATCCCCACGCCCACCTGAACGCCCAGGGCCACGGGCAACTCCTGGGCACAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS CCA 90 bp GAAGGGTTGGGCTCCCGGGCTGTGCCCAGGAGTTGCCCGTGGCCCTaGGCGTTCAGGTGGGCGTGGGGATGGTGCGGAGGAAGGCCGTTG +
Preference number: 5 (lower is better)
Translates to: EGLGSRAVPRSCPWP*AFRWAWGWCGGRPL
Trigger: CAACGGCCTTCCTCCGCACCATCCCCACGCCCACCTGAACGCCCAGGGCCACGGGCAACTCCTGGGCACAGCCCGGGAGCCCAACCCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS CCA 90 bp GTCACCGAAGGGTTGGGCTCCCGGGCTGTGCCCAGGAGTTGCCCGTaGCCCTGGGCGTTCAGGTGGGCGTGGGGATGGTGCGGAGGAAGG +
Preference number: 5 (lower is better)
Translates to: VTEGLGSRAVPRSCP*PWAFRWAWGWCGGR
Trigger: CCTTCCTCCGCACCATCCCCACGCCCACCTGAACGCCCAGGGCCACGGGCAACTCCTGGGCACAGCCCGGGAGCCCAACCCTTCGGTGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS GCA 90 bp CCCAGCAGGTCGGCAGGGGCGGGCACCGGCTCATGGCTCACCCCGTaGAGCTCGCCGATCGCTTCCATGGTCAGCTGCGCGTTCATCGTG +
Preference number: 5 (lower is better)
Translates to: PSRSAGAGTGSWLTP*SSPIASMVSCAFIV
Trigger: CACGATGAACGCGCAGCTGACCATGGAAGCGATCGGCGAGCTGCACGGGGTGAGCCATGAGCCGGTGCCCGCCCCTGCCGACCTGCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS CCA 90 bp GGCGTGAGGTGCTGCTCCCCGTGGCGGCCGAGCATGGCCGGGTGGTaGGCTTCGAAGCCGTTGGGGGTGAGCATCTTGTCGGTGGGCATG +
Preference number: 5 (lower is better)
Translates to: GVRCCSPWRPSMAGW*ASKPLGVSILSVGM
Trigger: CATGCCCACCGACAAGATGCTCACCCCCAACGGCTTCGAAGCCCACCACCCGGCCATGCTCGGCCGCCACGGGGAGCAGCACCTCACGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS CCA 90 bp GTTCATCGTGATCCGGGCGAGCAGGCGGCGGACACAACATCGATGTaGCCAGGCAGAGGCGGCGAGGGGCGCACGGAGTCCGGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: VHRDPGEQAADTTSM*PGRGGEGRTESGLH
Trigger: GTGAAGACCGGACTCCGTGCGCCCCTCGCCGCCTCTGCCTGGCCACATCGATGTTGTGTCCGCCGCCTGCTCGCCCGGATCACGATGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp AAATCCCCGGTGGGGTTCGGGCTGGGCTCAGCTTTCTTCTCTGCCTATCCGCGGCCGGTCACCGAAGGGTaGGGCTCCCGGGCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: KSPVGFGLGSAFFSAYPRPVTEG*GSRAVP
Trigger: GGGCACAGCCCGGGAGCCCAACCCTTCGGTGACCGG...CCGCGGATAGGCAGAGAAGAAAGCTGAGCCCAGCCCGAACCCCACCGGGGATTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS TCA 90 bp CGTGCAGCTCGCCGATCGCTTCCATGGTCAGCTGCGCGTTCATCGTaGTCCGGGCGAGCAGGCGGCGGACACAACATCGATGTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: RAARRSLPWSAARSS*SGRAGGGHNIDVAR
Trigger: CCTGGCCACATCGATGTTGTGTCCGCCGCCTGCTCGCCCGGATCACGATGAACGCGCAGCTGACCATGGAAGCGATCGGCGAGCTGCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp GCTCGCGGGCAGCCCACGGGTGGAGATATGGTGCCGGTAGCACAAGAGCCTCAATTGGGGGTGAGCATCTaGTCGGTGGGCATGGCGGCC +
Preference number: 5 (lower is better)
Translates to: ARGQPTGGDMVPVAQEPQLGVSI*SVGMAA
Trigger: GGCCGCCATGCCCACCGACAAGATGCTCACCCCCAA...TTGAGGCTCTTGTGCTACCGGCACCATATCTCCACCCGTGGGCTGCCCGCGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CAA 90 bp CCAGTTCGGCCAAACATCGACGCTGCTCCGGCACGCTCCAGCCCAGCGCCTGGGACCTGCGAGGAACATTaGCGTGCGATTCCACGCACG +
Preference number: 5 (lower is better)
Translates to: PVRPNIDAAPARSSPAPGTCEEH*RAIPRT
Trigger: CGTGCGTGGAATCGCACGCAAATGTTCCTCGCAGGT...CCCAGGCGCTGGGCTGGAGCGTGCCGGAGCAGCGTCGATGTTTGGCCGAACTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CAA 90 bp GCTCGCGGGCAGCCCACGGGTGGAGATATGGTGCCGGTAGCACAAGAGCCTCAACCACCACTCTCCCGCTaGGGCTCTGGAGAGACGGAG +
Preference number: 5 (lower is better)
Translates to: ARGQPTGGDMVPVAQEPQPPLSR*GSGETE
Trigger: CTCCGTCTCTCCAGAGCCCAAGCGGGAGAGTGGTGG...TTGAGGCTCTTGTGCTACCGGCACCATATCTCCACCCGTGGGCTGCCCGCGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS GCA 90 bp TCATGGCTCACCCCGTGCAGCTCGCCGATCGCTTCCATGGTCAGCTaGGCGTTCATCGTGATCCGGGCGAGCAGGCGGCGGACACAACAT +
Preference number: 5 (lower is better)
Translates to: SWLTPCSSPIASMVS*AFIVIRASRRRTQH
Trigger: ATGTTGTGTCCGCCGCCTGCTCGCCCGGATCACGATGAACGCGCAGCTGACCATGGAAGCGATCGGCGAGCTGCACGGGGTGAGCCATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp TTCGGCCAAACATCGACGCTGCTCCGGCACGCTCCAGCCCAGCGCCTGGGATGTTGGGCTTCGAAGCCGTaGGGGGTGAGCATCTTGTCG +
Preference number: 5 (lower is better)
Translates to: FGQTSTLLRHAPAQRLGCWASKP*GVSILS
Trigger: CGACAAGATGCTCACCCCCAACGGCTTCGAAGCCCA...ACATCCCAGGCGCTGGGCTGGAGCGTGCCGGAGCAGCGTCGATGTTTGGCCGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CAA 90 bp GAAATCCCCGGTGGGGTTCGGGCTGGGCTCAGCTTTCTTCTCTGCCTATCCGCGGCTCTCACTGGGACCTaGGGACGGTCAGCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: EIPGGVRAGLSFLLCLSAALTGT*GRSASL
Trigger: GAGGGAGGCTGACCGTCCCAAGGTCCCAGTGAGAGC...CGCGGATAGGCAGAGAAGAAAGCTGAGCCCAGCCCGAACCCCACCGGGGATTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CAA 90 bp CCAGTTCGGCCAAACATCGACGCTGCTCCGGCACGCTCCAGCCCAGCGCCTGGGCCCAGGACATGGCTATaGCTTTGCAGCTCTCACTGG +
Preference number: 5 (lower is better)
Translates to: PVRPNIDAAPARSSPAPGPRTWL*LCSSHW
Trigger: CCAGTGAGAGCTGCAAAGCAATAGCCATGTCCTGGG...CCCAGGCGCTGGGCTGGAGCGTGCCGGAGCAGCGTCGATGTTTGGCCGAACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS GCA 90 bp ACCCGGATCGCTGAACTGAGAGGTGGCGCAGAGTGTCTCACCAGGTaGGGGGATTTCTCTCCGCCTCAGGCCGTACGAGCTTCCCTCGCT +
Preference number: 5 (lower is better)
Translates to: TRIAELRGGAECLTR*GDFSPPQAVRASLA
Trigger: AGCGAGGGAAGCTCGTACGGCCTGAGGCGGAGAGAAATCCCCGCACCTGGTGAGACACTCTGCGCCACCTCTCAGTTCAGCGATCCGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CAA 90 bp ACATCGACGCTGCTCCGGCACGCTCCAGCCCAGCGCCTGGGATGTGTCAGAGGTATAGTGGGGGAGCCCTaGCTGGGAGTTGTGGATGCT +
Preference number: 5 (lower is better)
Translates to: TSTLLRHAPAQRLGCVRGIVGEP*LGVVDA
Trigger: AGCATCCACAACTCCCAGCAAGGGCTCCCCCACTAT...ACCTCTGACACATCCCAGGCGCTGGGCTGGAGCGTGCCGGAGCAGCGTCGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CAA 90 bp GGCAGGAGACCTCTGCTCCTAGACTTGGGGGTCATTTACACACTCTCATCCCCACCTCCGGAACCTCAGTaGCTCGCGGGCAGCCCACGG +
Preference number: 5 (lower is better)
Translates to: GRRPLLLDLGVIYTLSSPPPEPQ*LAGSPR
Trigger: CCGTGGGCTGCCCGCGAGCAACTGAGGTTCCGGAGG...TGGGGATGAGAGTGTGTAAATGACCCCCAAGTCTAGGAGCAGAGGTCTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CAA 90 bp CTTGGGGTTTCGGGCAGGAGACCTCTGCTCCTAGACTTGGGGGTCATTTACACATGCGGAGGAAGGCCGTaGATGGGCACCATGCCGGCC +
Preference number: 5 (lower is better)
Translates to: LGVSGRRPLLLDLGVIYTCGGRP*MGTMPA
Trigger: GGCCGGCATGGTGCCCATCAACGGCCTTCCTCCGCA...TGTGTAAATGACCCCCAAGTCTAGGAGCAGAGGTCTCCTGCCCGAAACCCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CAA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGACCGGTCACCGAAGGGTaGGGCTCCCGGGCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRPVTEG*GSRAVP
Trigger: GGGCACAGCCCGGGAGCCCAACCCTTCGGTGACCGG...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp AACCTCAGTTGCTCGCGGGCAGCCCACGGGTGGAGATATGGTGCCGGTAGCACAGATTCCACGCACGCGTaGCATCCCTCTTCCCAAACC +
Preference number: 5 (lower is better)
Translates to: NLSCSRAAHGWRYGAGSTDSTHA*HPSSQT
Trigger: GGTTTGGGAAGAGGGATGCAACGCGTGCGTGGAATC...TGTGCTACCGGCACCATATCTCCACCCGTGGGCTGCCCGCGAGCAACTGAGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CAA 90 bp TTCGGCCAAACATCGACGCTGCTCCGGCACGCTCCAGCCCAGCGCCTGGGATGTCCTCTGCTCCTAGACTaGGGGGTCATTTACACACTC +
Preference number: 5 (lower is better)
Translates to: FGQTSTLLRHAPAQRLGCPLLLD*GVIYTL
Trigger: GAGTGTGTAAATGACCCCCAAGTCTAGGAGCAGAGG...ACATCCCAGGCGCTGGGCTGGAGCGTGCCGGAGCAGCGTCGATGTTTGGCCGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS GCA 90 bp GTATTGATCTCTTCCATCTGCCCTGAATTACTTCCATTGCTGACCTaGGCGCCGGTCACCGAAGGGTTGGGCTCCCGGGCTGTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: VLISSICPELLPLLT*APVTEGLGSRAVPR
Trigger: CCTGGGCACAGCCCGGGAGCCCAACCCTTCGGTGACCGGCGCGCAGGTCAGCAATGGAAGTAATTCAGGGCAGATGGAAGAGATCAATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp GCGCCTCCCCAAACACAGCGCCACGTGCAAGAGGGTTTTGACCCTCTGCAACAGGCCCATACTCTTAGATaGAGGTCACCCCAGCCAGCG +
Preference number: 5 (lower is better)
Translates to: APPQTQRHVQEGFDPLQQAHTLR*RSPQPA
Trigger: CGCTGGCTGGGGTGACCTCAATCTAAGAGTATGGGC...CTGTTGCAGAGGGTCAAAACCCTCTTGCACGTGGCGCTGTGTTTGGGGAGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CAA 90 bp CAAACCCGGATCGCTGAACTGAGAGGTGGCGCAGAGTGTCTCACCAGGTGCGGGACGTGCAAGAGGGTTTaGACCCTCTGCAACAGGCTG +
Preference number: 5 (lower is better)
Translates to: QTRIAELRGGAECLTRCGTCKRV*TLCNRL
Trigger: CAGCCTGTTGCAGAGGGTCAAAACCCTCTTGCACGT...CCCGCACCTGGTGAGACACTCTGCGCCACCTCTCAGTTCAGCGATCCGGGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CAA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAAGAGGATCCGCGCCGTaGGGAGAGCGCAGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRRGSAP*GERSAP
Trigger: TGGGGCACTGCGCTCTCCCAACGGCGCGGATCCTCT...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAAAGCTACCGCTCACGTaGCCCGCCAGGCGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRKLPLT*PARRWW
Trigger: CCACCAGCGCCTGGCGGGCAACGTGAGCGGTAGCTT...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGATGCGGAGGAAGGCCGTaGATGGGCACCATGCCGGCC +
Preference number: 5 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRCGGRP*MGTMPA
Trigger: GGCCGGCATGGTGCCCATCAACGGCCTTCCTCCGCA...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp GTAGCACAAGAGCCTCAAGGGTCGCCGAATCCTCCTGAAATCCCCGGTGGGGTTGTCTCCCGGCCGGATTaGAGTTTGCTCCAGGGTTTG +
Preference number: 5 (lower is better)
Translates to: VAQEPQGSPNPPEIPGGVVSRPD*SLLQGL
Trigger: CAAACCCTGGAGCAAACTCAAATCCGGCCGGGAGAC...AACCCCACCGGGGATTTCAGGAGGATTCGGCGACCCTTGAGGCTCTTGTGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CAA 90 bp GGGTGGAGATATGGTGCCGGTAGCACAAGAGCCTCAAGGGTCGCCGAATCCTCCGACATGGCTATTGCTTaGCAGCTCTCACTGGGACCT +
Preference number: 5 (lower is better)
Translates to: GWRYGAGSTRASRVAESSDMAIA*QLSLGP
Trigger: AGGTCCCAGTGAGAGCTGCAAAGCAATAGCCATGTC...GGAGGATTCGGCGACCCTTGAGGCTCTTGTGCTACCGGCACCATATCTCCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CAA 90 bp GGCAGGAGACCTCTGCTCCTAGACTTGGGGGTCATTTACACACTCTCATCCCCAAGAAACACCTGGGGCTaGGGGTTTCGGGCAGGAGAC +
Preference number: 5 (lower is better)
Translates to: GRRPLLLDLGVIYTLSSPRNTWG*GFRAGD
Trigger: GTCTCCTGCCCGAAACCCCAAGCCCCAGGTGTTTCT...TGGGGATGAGAGTGTGTAAATGACCCCCAAGTCTAGGAGCAGAGGTCTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS-3UTR CAA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAAGCCCTTGCTGGGAGTaGTGGATGCTGCCCAGACCG +
Preference number: 5 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRSPCWE*WMLPRP
Trigger: CGGTCTGGGCAGCATCCACAACTCCCAGCAAGGGCT...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTTGGGCTTCGAAGCCGTaGGGGGTGAGCATCTTGTCG +
Preference number: 5 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAWASKP*GVSILS
Trigger: CGACAAGATGCTCACCCCCAACGGCTTCGAAGCCCA...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAGGCTGCTGGCGACTGTaGCCTTCCTTCCTCTCACTG +
Preference number: 5 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRGCWRL*PSFLSL
Trigger: CAGTGAGAGGAAGGAAGGCAACAGTCGCCAGCAGCC...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTCCTGAATTACTTCCATaGCTGACCTGCGCGCCGGTC +
Preference number: 5 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAPELLP*LTCAPV
Trigger: GACCGGCGCGCAGGTCAGCAATGGAAGTAATTCAGG...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp GATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACTTGTCCAGACTCCTCACCAACCTGGGCTTTTaGGGTGTGTTGCCTCTATCC +
Preference number: 5 (lower is better)
Translates to: DELPELELPSSCHLSRLLTNLGF*GVLPLS
Trigger: GGATAGAGGCAACACACCCAAAAAGCCCAGGTTGGT...GAGGAGTCTGGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CAA 90 bp GATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACTTGTCCGATGAGTTGCCTGAATaGGAGCTGCCCTCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: DEEDELPELELPSSCHLSDELPE*ELPSSC
Trigger: GCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATC...GGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CAA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAATAGTGGGGGAGCCCTaGCTGGGAGTTGTGGATGCT +
Preference number: 5 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRIVGEP*LGVVDA
Trigger: AGCATCCACAACTCCCAGCAAGGGCTCCCCCACTAT...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACTTGGGGGTGAGCATCTaGTCGGTGGGCATGGCGGCC +
Preference number: 5 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHLGVSI*SVGMAA
Trigger: GGCCGCCATGCCCACCGACAAGATGCTCACCCCCAA...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp GAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACTTGTCCAGACTCGGCTTTTTGGGTGTGTaGCCTCTATCCTTCCCATGT +
Preference number: 5 (lower is better)
Translates to: EDELPELELPSSCHLSRLGFLGV*PLSFPC
Trigger: ACATGGGAAGGATAGAGGCAACACACCCAAAAAGCC...GAGTCTGGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CAA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTTTTCCTGCTCATCATTaGTCTTGCCAAGTCGCCGCC +
Preference number: 5 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAFPAHH*SCQVAA
Trigger: GGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAA...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp GATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACTTGTCCAGACTCCTCCTGGGAAATGGTGATTaGCAATTCTTTGGATGGACG +
Preference number: 5 (lower is better)
Translates to: DELPELELPSSCHLSRLLLGNGD*QFFGWT
Trigger: CGTCCATCCAAAGAATTGCAAATCACCATTTCCCAG...GAGGAGTCTGGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CAA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAGAATCTGCATTTAGGTaGCGGGCCTGGCAGGTTCAA +
Preference number: 5 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRESAFR*RAWQVQ
Trigger: TTGAACCTGCCAGGCCCGCAACCTAAATGCAGATTC...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp GATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACTTGTCCAGACTCCTCATCCTTCCCATGTTCTaGTTCTTTCCTTTTGCATGC +
Preference number: 5 (lower is better)
Translates to: DELPELELPSSCHLSRLLILPMF*FFPFAC
Trigger: GCATGCAAAAGGAAAGAACAAGAACATGGGAAGGAT...GAGGAGTCTGGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CAA 90 bp GATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACTTGTCCCACCGAGGTTTTAGTTaGTGGTTCTTCCTTCATGCT +
Preference number: 5 (lower is better)
Translates to: DEEDELPELELPSSCHLSHRGFS*WFFLHA
Trigger: AGCATGAAGGAAGAACCACAAACTAAAACCTCGGTG...GGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CAA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTAGAAGGCAGAATGCTTaGGAGGCTATTCTTAGTTCC +
Preference number: 5 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPARRQNA*EAILSS
Trigger: GGAACTAAGAATAGCCTCCAAAGCATTCTGCCTTCT...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGACTGGGAAATGGTGATTaGCAATTCTTTGGATGGACG +
Preference number: 5 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRLGNGD*QFFGWT
Trigger: CGTCCATCCAAAGAATTGCAAATCACCATTTCCCAG...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp GATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACTTGTCCCTTTGGTACAAGTGCTaGATGAAGAAGATGAGTTGC +
Preference number: 5 (lower is better)
Translates to: DEEDELPELELPSSCHLSLWYKC*MKKMSC
Trigger: GCAACTCATCTTCTTCATCAAGCACTTGTACCAAAG...GGACAAGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CAA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTCAGATAGATGGCTTGTaGGTTTTGCTTTACCTCTCT +
Preference number: 5 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAQIDGL*VLLYLS
Trigger: AGAGAGGTAAAGCAAAACCAACAAGCCATCTATCTG...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAGCCCCGCTGGCCAGCTaGAGCCATGGCTCTGTTACT +
Preference number: 5 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEAPLAS*SHGSVT
Trigger: AGTAACAGAGCCATGGCTCAAGCTGGCCAGCGGGGC...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGAATCCTTCCCATGTTCTaGTTCTTTCCTTTTGCATGC +
Preference number: 5 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRILPMF*FFPFAC
Trigger: GCATGCAAAAGGAAAGAACAAGAACATGGGAAGGAT...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACACCAACCTGGGCTTTTaGGGTGTGTTGCCTCTATCC +
Preference number: 5 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHTNLGF*GVLPLS
Trigger: GGATAGAGGCAACACACCCAAAAAGCCCAGGTTGGT...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp TTGTCTTGCCAAGTCGCCGCCCTGCTGAAGTGTGTGTCTCCAAACAAAGTCAGACTTTGGTACAAGTGCTaGATGAAGAAGATGAGTTGC +
Preference number: 5 (lower is better)
Translates to: LSCQVAALLKCVSPNKVRLWYKC*MKKMSC
Trigger: GCAACTCATCTTCTTCATCAAGCACTTGTACCAAAG...TCTGACTTTGTTTGGAGACACACACTTCAGCAGGGCGGCGACTTGGCAAGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTTTCTTCCTTCATGCTTaGGTACAAGTGCTTGATGAA +
Preference number: 5 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAFFLHA*VQVLDE
Trigger: TTCATCAAGCACTTGTACCAAAGCATGAAGGAAGAA...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp GTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACTTCTTCCTTCATGCTTaGGTACAAGTGCTTGATGAA +
Preference number: 5 (lower is better)
Translates to: VLDEEDELPELELPSSCHFFLHA*VQVLDE
Trigger: TTCATCAAGCACTTGTACCAAAGCATGAAGGAAGAA...GTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CAA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTTTTTCTTTGCTGGGTTaGAATCTGCATTTAGGTTGC +
Preference number: 5 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAFSLLG*NLHLGC
Trigger: GCAACCTAAATGCAGATTCAAACCCAGCAAAGAAAA...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTAAATGGGGTACTACTTaGGAAAGATCCTCAGGTTTT +
Preference number: 5 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAKWGTT*ERSSGF
Trigger: AAAACCTGAGGATCTTTCCAAAGTAGTACCCCATTT...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS CCA 90 bp GATGGACGCTTATTTTCCTTGAATATTGCATGTAGAGTTCGACGCTaGACATCTGTGAAGACCAACCTGGGCTTTTTGGGTGTGTTGCCT +
Preference number: 5 (lower is better)
Translates to: DGRLFSLNIACRVRR*TSVKTNLGFLGVLP
Trigger: AGGCAACACACCCAAAAAGCCCAGGTTGGTCTTCACAGATGTCCAGCGTCGAACTCTACATGCAATATTCAAGGAAAATAAGCGTCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305901.7
ENST00000560699.2
ENST00000561401.3
CDS-3UTR CAA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTGGACGCTTATTTTCCTaGAATATTGCATGTAGAGTT +
Preference number: 5 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPAGRLFS*NIACRV
Trigger: AACTCTACATGCAATATTCAAGGAAAATAAGCGTCC...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp GATCCAGTGGTGTTTTCCTGCTCATCATTTGTCTTGCCAAGTCGCCGCCCTGCTCTAAGGAGTTATGTTTaGTGTCAAGATGGTTCAGTT +
Preference number: 5 (lower is better)
Translates to: DPVVFSCSSFVLPSRRPALRSYV*CQDGSV
Trigger: AACTGAACCATCTTGACACAAAACATAACTCCTTAG...AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCAGGAAAACACCACTGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAGTCTCCCGGCCGGATTaGAGTTTGCTCCAGGGTTTG +
Preference number: 5 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEVSRPD*SLLQGL
Trigger: CAAACCCTGGAGCAAACTCAAATCCGGCCGGGAGAC...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp TGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGCCACTGGACGCTTATTTTCCTaGAATATTGCATGTAGAGTT +
Preference number: 5 (lower is better)
Translates to: CLMKKMSCLNWSCPRPATGRLFS*NIACRV
Trigger: AACTCTACATGCAATATTCAAGGAAAATAAGCGTCC...AGTGGCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CAA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAGATGAGTTGCCTGAATaGGAGCTGCCCTCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEDELPE*ELPSSC
Trigger: GCAGGACGAGGGCAGCTCCAATTCAGGCAACTCATC...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp TACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGGAAACATGCAGTGTTaGACAGAAATTGCAAGATGC +
Preference number: 5 (lower is better)
Translates to: YKCLMKKMSCLNWSCPRPGNMQC*TEIARC
Trigger: GCATCTTGCAATTTCTGTCAAACACTGCATGTTTCC...AGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CAA 90 bp TACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTGTGATTTGCAATTCTTaGGATGGACGCTTATTTTCC +
Preference number: 5 (lower is better)
Translates to: YKCLMKKMSCLNWSCPRPVICNS*DGRLFS
Trigger: GGAAAATAAGCGTCCATCCAAAGAATTGCAAATCAC...AGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CAA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAATGCTCATCATTTGTCTaGCCAAGTCGCCGCCCTGCT +
Preference number: 5 (lower is better)
Translates to: QRECTGLGVIQIFFAGFECSSFV*PSRRPA
Trigger: AGCAGGGCGGCGACTTGGCAAGACAAATGATGAGCA...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACGATGGCTTGTTGGTTTaGCTTTACCTCTCTAGTTGC +
Preference number: 5 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHDGLLV*LYLSSC
Trigger: GCAACTAGAGAGGTAAAGCAAAACCAACAAGCCATC...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp TACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCCCTCGTCCTAAAGCACATAGTTTATaGCGTTCCTTCGATAACCTC +
Preference number: 5 (lower is better)
Translates to: YKCLMKKMSCLNWSCPRPKAHSL*RSFDNL
Trigger: GAGGTTATCGAAGGAACGCAATAAACTATGTGCTTT...AGGACGAGGGCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS GCA 90 bp CACATGGTGACTGGAAACATGCAGTGTTTGACAGAAATTGCAAGATaGCCTCTAGACAACTCCCAGCCTATATACTCTGTTTTGGTCAAT +
Preference number: 5 (lower is better)
Translates to: HMVTGNMQCLTEIAR*PLDNSQPIYSVLVN
Trigger: ATTGACCAAAACAGAGTATATAGGCTGGGAGTTGTCTAGAGGGCATCTTGCAATTTCTGTCAAACACTGCATGTTTCCAGTCACCATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CAA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAGGCTTTTTGGGTGTGTaGCCTCTATCCTTCCCATGT +
Preference number: 5 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEGFLGV*PLSFPC
Trigger: ACATGGGAAGGATAGAGGCAACACACCCAAAAAGCC...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp AATCACACTCCTAATCCAATGAACTCAGACAACCCCATACCATGTTGGTTGCACGTGATTTGCAATTCTTaGGATGGACGCTTATTTTCC +
Preference number: 5 (lower is better)
Translates to: NHTPNPMNSDNPIPCWLHVICNS*DGRLFS
Trigger: GGAAAATAAGCGTCCATCCAAAGAATTGCAAATCAC...GTGCAACCAACATGGTATGGGGTTGTCTGAGTTCATTGGATTAGGAGTGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAATCTTGTTCTTTCCTTTaGCATGCTGCTAAGCGGAGC +
Preference number: 5 (lower is better)
Translates to: QRECTGLGVIQIFFAGFESCSFL*HAAKRS
Trigger: GCTCCGCTTAGCAGCATGCAAAAGGAAAGAACAAGA...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp ATGCTTTGGTACAAGTGCTTGATGAAGAAGATGAGTTGCCTGAATTGGAGCTGCTATAAACCTGCTATCTaGAGGTCCTGGTCTTTTAAA +
Preference number: 5 (lower is better)
Translates to: MLWYKCLMKKMSCLNWSCYKPAI*RSWSFK
Trigger: TTTAAAAGACCAGGACCTCAAGATAGCAGGTTTATA...GCAGCTCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTACCAAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CAA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAACCCATACCATGTTGGTaGCACTCCTATAGAACAACC +
Preference number: 5 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEPIPCW*HSYRTT
Trigger: GGTTGTTCTATAGGAGTGCAACCAACATGGTATGGG...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS CCA 90 bp AGCAAAAAGCACATAGTTTATTGCGTTCCTTCGATAACCTCTCTTTaGGACTATGAGATCATCACCAGATGTGAAAACGAAAGCAGTGAT +
Preference number: 5 (lower is better)
Translates to: SKKHIVYCVPSITSL*DYEIITRCENESSD
Trigger: ATCACTGCTTTCGTTTTCACATCTGGTGATGATCTCATAGTCCCAAAGAGAGGTTATCGAAGGAACGCAATAAACTATGTGCTTTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS-3UTR CAA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAACACCGAGGTTTTAGTTaGTGGTTCTTCCTTCATGCT +
Preference number: 5 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEHRGFS*WFFLHA
Trigger: AGCATGAAGGAAGAACCACAAACTAAAACCTCGGTG...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAAATAGATCAAAAGTCTaGTCGTCCACCAGAACACTG +
Preference number: 5 (lower is better)
Translates to: QRECTGLGVIQIFFAGFENRSKV*SSTRTL
Trigger: CAGTGTTCTGGTGGACGACAAGACTTTTGATCTATT...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAAGTGTGTAGACACAGCTaGAATTTCCCTGCATTTAGA +
Preference number: 5 (lower is better)
Translates to: QRECTGLGVIQIFFAGFEVCRHS*NFPAFR
Trigger: TCTAAATGCAGGGAAATTCAAGCTGTGTCTACACAC...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS-3UTR CAA 90 bp CAAAGAGAATGCACTGGTTTAGGTGTCATTCAAATTTTCTTTGCTGGGTTTGAACTTGGGGTATTGAATTaGGTAAGATTGTGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: QRECTGLGVIQIFFAGFELGVLN*VRLCVD
Trigger: GTCTACACACAATCTTACCAAATTCAATACCCCAAG...TTCAAACCCAGCAAAGAAAATTTGAATGACACCTAAACCAGTGCATTCTCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS CAA 90 bp CGCGCCGGTCACCGAAGGGTTGGGCTCCCGGGCTGTGCCCAGGAGTaGCCCGTGGCCCTGGGCGTTCAGGTGGGCGTGGGGATGGTGCGG +
Preference number: 6 (lower is better)
Translates to: RAGHRRVGLPGCAQE*PVALGVQVGVGMVR
Trigger: CCGCACCATCCCCACGCCCACCTGAACGCCCAGGGCCACGGGCAACTCCTGGGCACAGCCCGGGAGCCCAACCCTTCGGTGACCGGCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS GCA 72 bp GGGCCCGGTGGTGGTGGTGGTAATCTCCGCCGCCGCTaGCGCCGTCCAGCAGGGACGCCATGCCCATGGAGC +
Preference number: 6 (lower is better)
Translates to: GPGGGGGNLRRR*RRPAGTPCPWS
Trigger: GCTCCATGGGCATGGCGTCCCTGCTGGACGGCGGCAGCGGCGGCGGAGATTACCACCACCACCACCGGGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS CCA 72 bp CCGCCCAGCAGGTCGGCAGGGGCGGGCACCGGCTCATaGCTCACCCCGTGCAGCTCGCCGATCGCTTCCATG +
Preference number: 6 (lower is better)
Translates to: PPSRSAGAGTGS*LTPCSSPIASM
Trigger: CATGGAAGCGATCGGCGAGCTGCACGGGGTGAGCCATGAGCCGGTGCCCGCCCCTGCCGACCTGCTGGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS CCA 72 bp ATGCCGGCCGAGGTGGGCGTGAGGTGCTGCTCCCCGTaGCGGCCGAGCATGGCCGGGTGGTGGGCTTCGAAG +
Preference number: 6 (lower is better)
Translates to: MPAEVGVRCCSP*RPSMAGWWASK
Trigger: CTTCGAAGCCCACCACCCGGCCATGCTCGGCCGCCACGGGGAGCAGCACCTCACGCCCACCTCGGCCGGCAT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS CCA 72 bp GCGCGAAGATGGCCTGCGCGCCGGTCACCGAAGGGTTaGGCTCCCGGGCTGTGCCCAGGAGTTGCCCGTGGC +
Preference number: 6 (lower is better)
Translates to: ARRWPARRSPKG*APGLCPGVARG
Trigger: GCCACGGGCAACTCCTGGGCACAGCCCGGGAGCCCAACCCTTCGGTGACCGGCGCGCAGGCCATCTTCGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS GCA 72 bp TCGGCAGGGGCGGGCACCGGCTCATGGCTCACCCCGTaGAGCTCGCCGATCGCTTCCATGGTCAGCTGCGCG +
Preference number: 6 (lower is better)
Translates to: SAGAGTGSWLTP*SSPIASMVSCA
Trigger: CGCGCAGCTGACCATGGAAGCGATCGGCGAGCTGCACGGGGTGAGCCATGAGCCGGTGCCCGCCCCTGCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS CAA 90 bp GTCGGTGGGCATGGCGGCCCCCGGGTGGGCATAGTGGGGGAGCCCTaGCTGGGAGTTGTGGATGCTGCCCAGACCGGAGCTGGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: VGGHGGPRVGIVGEP*LGVVDAAQTGAGEG
Trigger: CCCCTCTCCAGCTCCGGTCTGGGCAGCATCCACAACTCCCAGCAAGGGCTCCCCCACTATGCCCACCCGGGGGCCGCCATGCCCACCGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS CCA 72 bp TGCCCGTGGCCCTGGGCGTTCAGGTGGGCGTGGGGATaGTGCGGAGGAAGGCCGTTGATGGGCACCATGCCG +
Preference number: 6 (lower is better)
Translates to: CPWPWAFRWAWG*CGGRPLMGTMP
Trigger: CGGCATGGTGCCCATCAACGGCCTTCCTCCGCACCATCCCCACGCCCACCTGAACGCCCAGGGCCACGGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS CAA 72 bp CGGCCGAGCATGGCCGGGTGGTGGGCTTCGAAGCCGTaGGGGGTGAGCATCTTGTCGGTGGGCATGGCGGCC +
Preference number: 6 (lower is better)
Translates to: RPSMAGWWASKP*GVSILSVGMAA
Trigger: GGCCGCCATGCCCACCGACAAGATGCTCACCCCCAACGGCTTCGAAGCCCACCACCCGGCCATGCTCGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS GCA 72 bp ACCCCGTGCAGCTCGCCGATCGCTTCCATGGTCAGCTaGGCGTTCATCGTGATCCGGGCGAGCAGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: TPCSSPIASMVS*AFIVIRASRRR
Trigger: CCGCCGCCTGCTCGCCCGGATCACGATGAACGCGCAGCTGACCATGGAAGCGATCGGCGAGCTGCACGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS CCA 72 bp TGCTGCTCCCCGTGGCGGCCGAGCATGGCCGGGTGGTaGGCTTCGAAGCCGTTGGGGGTGAGCATCTTGTCG +
Preference number: 6 (lower is better)
Translates to: CCSPWRPSMAGW*ASKPLGVSILS
Trigger: CGACAAGATGCTCACCCCCAACGGCTTCGAAGCCCACCACCCGGCCATGCTCGGCCGCCACGGGGAGCAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS CCA 72 bp AGGTGCTGCTCCCCGTGGCGGCCGAGCATGGCCGGGTaGTGGGCTTCGAAGCCGTTGGGGGTGAGCATCTTG +
Preference number: 6 (lower is better)
Translates to: RCCSPWRPSMAG*WASKPLGVSIL
Trigger: CAAGATGCTCACCCCCAACGGCTTCGAAGCCCACCACCCGGCCATGCTCGGCCGCCACGGGGAGCAGCACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS CCA 72 bp AGGAGTTGCCCGTGGCCCTGGGCGTTCAGGTGGGCGTaGGGATGGTGCGGAGGAAGGCCGTTGATGGGCACC +
Preference number: 6 (lower is better)
Translates to: RSCPWPWAFRWA*GWCGGRPLMGT
Trigger: GGTGCCCATCAACGGCCTTCCTCCGCACCATCCCCACGCCCACCTGAACGCCCAGGGCCACGGGCAACTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS CCA 72 bp GTGCCCAGGAGTTGCCCGTGGCCCTGGGCGTTCAGGTaGGCGTGGGGATGGTGCGGAGGAAGGCCGTTGATG +
Preference number: 6 (lower is better)
Translates to: VPRSCPWPWAFR*AWGWCGGRPLM
Trigger: CATCAACGGCCTTCCTCCGCACCATCCCCACGCCCACCTGAACGCCCAGGGCCACGGGCAACTCCTGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS CAA 72 bp CATGGCGGCCCCCGGGTGGGCATAGTGGGGGAGCCCTaGCTGGGAGTTGTGGATGCTGCCCAGACCGGAGCT +
Preference number: 6 (lower is better)
Translates to: HGGPRVGIVGEP*LGVVDAAQTGA
Trigger: AGCTCCGGTCTGGGCAGCATCCACAACTCCCAGCAAGGGCTCCCCCACTATGCCCACCCGGGGGCCGCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS CAA 90 bp CCTGAATTACTTCCATTGCTGACCTGCGCGCCGGTCACCGAAGGGTaGGGCTCCCGGGCTGTGCCCAGGAGTTGCCCGTGGCCCTGGGCG +
Preference number: 6 (lower is better)
Translates to: PELLPLLTCAPVTEG*GSRAVPRSCPWPWA
Trigger: CGCCCAGGGCCACGGGCAACTCCTGGGCACAGCCCGGGAGCCCAACCCTTCGGTGACCGGCGCGCAGGTCAGCAATGGAAGTAATTCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS GCA 72 bp GGGCATAGTGGGGGAGCCCTTGCTGGGAGTTGTGGATaGTGCCCAGACCGGAGCTGGAGAGGGGCGAGAGGC +
Preference number: 6 (lower is better)
Translates to: GHSGGALAGSCG*CPDRSWRGARG
Trigger: GCCTCTCGCCCCTCTCCAGCTCCGGTCTGGGCAGCATCCACAACTCCCAGCAAGGGCTCCCCCACTATGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS CCA 72 bp TGGGCATGCTCATACCTGGGGGAGTCTCGCAGGCCATaGTCATGGTGGGATGCAGGGGGCCGGCCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: WACSYLGESRRP*SWWDAGGRPGC
Trigger: ACAGCCTGGCCGGCCCCCTGCATCCCACCATGACCATGGCCTGCGAGACTCCCCCAGGTATGAGCATGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS GCA 72 bp GGCGAGGGGCGCACGGAGTCCGGTCTTCACATCGGCTaGTGGCGACTGTTGCCTTCCTTCCTCTCACTGTGG +
Preference number: 6 (lower is better)
Translates to: GEGRTESGLHIG*WRLLPSFLSLW
Trigger: CCACAGTGAGAGGAAGGAAGGCAACAGTCGCCAGCAGCCGATGTGAAGACCGGACTCCGTGCGCCCCTCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS GCA 72 bp CATAGTGGGGGAGCCCTTGCTGGGAGTTGTGGATGCTaGCCAGACCGGAGCTGGAGAGGGGCGAGAGGCTCT +
Preference number: 6 (lower is better)
Translates to: HSGGALAGSCGC*PDRSWRGARGS
Trigger: AGAGCCTCTCGCCCCTCTCCAGCTCCGGTCTGGGCAGCATCCACAACTCCCAGCAAGGGCTCCCCCACTATG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305901.7
ENST00000570208.2
CDS TCA 72 bp CGCCGATCGCTTCCATGGTCAGCTGCGCGTTCATCGTaGTCCGGGCGAGCAGGCGGCGGACACAACATCGAT +
Preference number: 6 (lower is better)
Translates to: RRSLPWSAARSS*SGRAGGGHNID
Trigger: ATCGATGTTGTGTCCGCCGCCTGCTCGCCCGGATCACGATGAACGCGCAGCTGACCATGGAAGCGATCGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS GCA 72 bp GCTGAACTGAGAGGTGGCGCAGAGTGTCTCACCAGGTaGGGGGATTTCTCTCCGCCTCAGGCCGTACGAGCT +
Preference number: 6 (lower is better)
Translates to: AELRGGAECLTR*GDFSPPQAVRA
Trigger: AGCTCGTACGGCCTGAGGCGGAGAGAAATCCCCGCACCTGGTGAGACACTCTGCGCCACCTCTCAGTTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570208.2
CDS CAA 72 bp GTATTGATCTCTTCCATCTGCCCTGAATTACTTCCATaGCTGACCTGCGCGCCGGTCACCGAAGGGTTGGGC +
Preference number: 6 (lower is better)
Translates to: VLISSICPELLP*LTCAPVTEGLG
Trigger: GCCCAACCCTTCGGTGACCGGCGCGCAGGTCAGCAATGGAAGTAATTCAGGGCAGATGGAAGAGATCAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305901.7
CDS CCA 72 bp GTCGCAGAATCTGCAGCGAGCACAGAGGTCACTAGGTaGCGCGCTTCGCTCGTTTGTTTATTTAATTTTCCC +
Preference number: 6 (lower is better)
Translates to: VAESAASTEVTR*RASLVCLFNFP
Trigger: GGGAAAATTAAATAAACAAACGAGCGAAGCGCGCCACCTAGTGACCTCTGTGCTCGCTGCAGATTCTGCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS CAA 90 bp TGTAGAGTTCGACGCTGGACATCTGTGAAGACCAACCTGGGCTTTTaGGGTGTGTTGCCTCTATCCTTCCCATGTTCTTGTTCTTTCCTT +
Preference number: 6 (lower is better)
Translates to: CRVRRWTSVKTNLGF*GVLPLSFPCSCSFL
Trigger: AAGGAAAGAACAAGAACATGGGAAGGATAGAGGCAACACACCCAAAAAGCCCAGGTTGGTCTTCACAGATGTCCAGCGTCGAACTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305901.7
ENST00000560699.2
ENST00000561401.3
CDS CAA 72 bp ACATCTGTGAAGACCAACCTGGGCTTTTTGGGTGTGTaGCCTCTATCCTTCCCATGTTCTTGTTCTTTCCTT +
Preference number: 6 (lower is better)
Translates to: TSVKTNLGFLGV*PLSFPCSCSFL
Trigger: AAGGAAAGAACAAGAACATGGGAAGGATAGAGGCAACACACCCAAAAAGCCCAGGTTGGTCTTCACAGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305901.7
ENST00000560699.2
ENST00000561401.3
CDS CAA 90 bp GCAAAGGAAGATGAGAAACACATGGTGACTGGAAACATGCAGTGTTaGACAGAAATTGCAAGATGCCCTCTAGACAACTCCCAGCCTATA +
Preference number: 6 (lower is better)
Translates to: AKEDEKHMVTGNMQC*TEIARCPLDNSQPI
Trigger: TATAGGCTGGGAGTTGTCTAGAGGGCATCTTGCAATTTCTGTCAAACACTGCATGTTTCCAGTCACCATGTGTTTCTCATCTTCCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS GCA 72 bp ACTGGAAACATGCAGTGTTTGACAGAAATTGCAAGATaGCCTCTAGACAACTCCCAGCCTATATACTCTGTT +
Preference number: 6 (lower is better)
Translates to: TGNMQCLTEIAR*PLDNSQPIYSV
Trigger: AACAGAGTATATAGGCTGGGAGTTGTCTAGAGGGCATCTTGCAATTTCTGTCAAACACTGCATGTTTCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560699.2
CDS CCA 72 bp TTATTTTCCTTGAATATTGCATGTAGAGTTCGACGCTaGACATCTGTGAAGACCAACCTGGGCTTTTTGGGT +
Preference number: 6 (lower is better)
Translates to: LFSLNIACRVRR*TSVKTNLGFLG
Trigger: ACCCAAAAAGCCCAGGTTGGTCTTCACAGATGTCCAGCGTCGAACTCTACATGCAATATTCAAGGAAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305901.7
ENST00000560699.2
ENST00000561401.3
CDS CCA 72 bp CACATAGTTTATTGCGTTCCTTCGATAACCTCTCTTTaGGACTATGAGATCATCACCAGATGTGAAAACGAA +
Preference number: 6 (lower is better)
Translates to: HIVYCVPSITSL*DYEIITRCENE
Trigger: TTCGTTTTCACATCTGGTGATGATCTCATAGTCCCAAAGAGAGGTTATCGAAGGAACGCAATAAACTATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560699.2