RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFML3 (Homo sapiens)

Ensembl gene IDs: ENSG00000116774

Ensembl transcript IDs: ENST00000320334.5, ENST00000369551.5, ENST00000393300.6, ENST00000491700.1, ENST00000633022.1

Found 229 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAAGTCACTCTGAGGGGAAGAACACTGCTGCCTGCTCCCTGGGCCTaGCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGC +
Preference number: 1 (lower is better)
Translates to: QVTLRGRTLLPAPWA*PHTRLEPWVWGILS
Trigger: GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCAGGCAGCAGTGTTCTTCCCCTCAGAGTGACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
3UTR CCA 90 bp CCTGCTCCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTaGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGGAGAGC +
Preference number: 1 (lower is better)
Translates to: PAPWACPHTRLEPWV*GILSLKFVDMGQES
Trigger: GCTCTCCTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
3UTR-3UTR CCA 90 bp AACAATGTGGAGAAAGTCCTGTTCCTCAGGACACTGAAGGGAGGAGTGAGGAAGTTAGAGCCCTGGGTCTaGGGCATCCTTAGCCTGAAA +
Preference number: 2 (lower is better)
Translates to: NNVEKVLFLRTLKGGVRKLEPWV*GILSLK
Trigger: TTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA...CTTCCTCACTCCTCCCTTCAGTGTCCTGAGGAACAGGACTTTCTCCACATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
3UTR-3UTR TCA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGATCTGGAGTTCCGTATaGAACAAAGGAGCTGAAAGA +
Preference number: 2 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMIWSSV*NKGAER
Trigger: TCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGAT...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
3UTR-3UTR TCA 90 bp GGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGGAGAGCAGGAGGGAACATGGAGCTGAAAGAATTTaGTTGCCATTGGCTAAAAAT +
Preference number: 2 (lower is better)
Translates to: GILSLKFVDMGQESRREHGAERI*LPLAKN
Trigger: ATTTTTAGCCAATGGCAATCAAATTCTTTCAGCTCC...ATGTTCCCTCCTGCTCTCCTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
3UTR GCA 72 bp CTGAGGGGAAGAACACTGCTGCCTGCTCCCTGGGCCTaGCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGC +
Preference number: 3 (lower is better)
Translates to: LRGRTLLPAPWA*PHTRLEPWVWG
Trigger: GCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCAGGCAGCAGTGTTCTTCCCCTCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
3UTR-3UTR CAA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCGAGCAGGAGGGAACATaGAGGGTTTTGACTCTTCGG +
Preference number: 3 (lower is better)
Translates to: PWACPHTRLEPWVWGILSEQEGT*RVLTLR
Trigger: CCGAAGAGTCAAAACCCTCAATGTTCCCTCCTGCTC...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
3UTR CCA 72 bp GCTCCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTaGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGAC +
Preference number: 3 (lower is better)
Translates to: APWACPHTRLEP*VWGILSLKFVD
Trigger: GTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
3UTR CCA 72 bp TGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTaGGGCATCCTTAGCCTGAAATTTGTTGACATGGGG +
Preference number: 3 (lower is better)
Translates to: WACPHTRLEPWV*GILSLKFVDMG
Trigger: CCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
3UTR-3UTR CAA 90 bp TGCTCCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTAAAAATATAGAGGATTaGAGCCACAACTGGCCCACA +
Preference number: 3 (lower is better)
Translates to: CSLGLPAYKVRALGLGHPKNIED*SHNWPT
Trigger: TGTGGGCCAGTTGTGGCTCAAATCCTCTATATTTTT...AGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
3UTR-3UTR CAA 90 bp TTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGGAGCAGGAGGGAACATaGAGGGTTTTGACTCTTCGG +
Preference number: 3 (lower is better)
Translates to: LEPWVWGILSLKFVDMGQEQEGT*RVLTLR
Trigger: CCGAAGAGTCAAAACCCTCAATGTTCCCTCCTGCTC...CTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
3UTR-3UTR CAA 90 bp TTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGAAAAATATAGAGGATTaGAGCCACAACTGGCCCACA +
Preference number: 3 (lower is better)
Translates to: LEPWVWGILSLKFVDMGQKNIED*SHNWPT
Trigger: TGTGGGCCAGTTGTGGCTCAAATCCTCTATATTTTT...CTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
3UTR-3UTR CAA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGAACATTGAGGGTTTaGACTCTTCGGGCTCTAAAA +
Preference number: 3 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMGTLRV*TLRALK
Trigger: TTTTAGAGCCCGAAGAGTCAAAACCCTCAATGTTCC...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
3UTR-3UTR CAA 90 bp AACAATGTGGAGAAAGTCCTGTTCCTCAGGACACTGAAGGGAGGAGTGAGGAAGAAAAATATAGAGGATTaGAGCCACAACTGGCCCACA +
Preference number: 3 (lower is better)
Translates to: NNVEKVLFLRTLKGGVRKKNIED*SHNWPT
Trigger: TGTGGGCCAGTTGTGGCTCAAATCCTCTATATTTTT...CTTCCTCACTCCTCCCTTCAGTGTCCTGAGGAACAGGACTTTCTCCACATTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
3UTR-3UTR CAA 90 bp GGAGGGAACATTGAGGGTTTTGACTCTTCGGGCTCTAAAAGGATTACTCAGGATACAACTGGCCCACATTaGAAGAATGAGGAACAAGAA +
Preference number: 3 (lower is better)
Translates to: GGNIEGFDSSGSKRITQDTTGPH*KNEEQE
Trigger: TTCTTGTTCCTCATTCTTCAAATGTGGGCCAGTTGT...ATCCTGAGTAATCCTTTTAGAGCCCGAAGAGTCAAAACCCTCAATGTTCCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
3UTR-3UTR CAA 90 bp TACTCAGGATCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCACAACTGGCCCACATTaGAAGAATGAGGAACAAGAA +
Preference number: 3 (lower is better)
Translates to: YSGSGVPYETKELKEFDCTTGPH*KNEEQE
Trigger: TTCTTGTTCCTCATTCTTCAAATGTGGGCCAGTTGT...GCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGATCCTGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp TGCTCCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTCAAAGGAGCACTGGATaGGGGCCCGACTGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: CSLGLPAYKVRALGLGHPQRSTG*GPDWQD
Trigger: GTCCTGCCAGTCGGGCCCGCATCCAGTGCTCCTTTG...AGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCGACTACTCTGGTCCTaGCACTGGGCCAGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: PWACPHTRLEPWVWGILSRLLWS*HWASRS
Trigger: GGAACGGCTGGCCCAGTGCCAGGACCAGAGTAGTCG...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCGCATGCCGACTACTCTaGTCCTGGCACTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PWACPHTRLEPWVWGILSACRLL*SWHWAS
Trigger: GCTGGCCCAGTGCCAGGACCAGAGTAGTCGGCATGC...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCTCCACAAGGTGGTGCTaGTGTCCTTGGAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PWACPHTRLEPWVWGILSSTRWC*CPWRGP
Trigger: GGGACCCCTCCAAGGACAGCAGCACCACCTTGTGGA...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCGCAGCTCAGCAGCATaGCGACTACTCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PWACPHTRLEPWVWGILSRSSAA*RLLWSW
Trigger: CCAGGACCAGAGTAGTCGGCATGCTGCTGAGCTGCG...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp TGCTCCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTCGCAGCTCAGCAGCATaGCGACTACTCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: CSLGLPAYKVRALGLGHPRSSAA*RLLWSW
Trigger: CCAGGACCAGAGTAGTCGGCATGCTGCTGAGCTGCG...AGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCATACCAGCTGCCCTGTaGCTACCCAGGGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PWACPHTRLEPWVWGILSIPAAL*LPRGRA
Trigger: TGCCCTTCCCCTGGGTAGGCACAGGGCAGCTGGTAT...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp TGCTCCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTCCACCATATACCAGCTaGCCTGTGCCTACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: CSLGLPAYKVRALGLGHPPPYTS*PVPTQG
Trigger: CCCCTGGGTAGGCACAGGGCAGCTGGTATATGGTGG...AGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCCTGCTCCCTGGGCCTaGCCGCATACAAGGTTAGAG +
Preference number: 4 (lower is better)
Translates to: PWACPHTRLEPWVWGILSPAPWA*PHTRLE
Trigger: CTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCAGG...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCGGGTCAGGGTGCCGCTaGCATCAAAGGAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: PWACPHTRLEPWVWGILSGSGCR*HQRSTG
Trigger: TCCAGTGCTCCTTTGATGCCAGCGGCACCCTGACCC...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TGCTCCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTGGGTCAGGGTGCCGCTaGCATCAAAGGAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: CSLGLPAYKVRALGLGHPGSGCR*HQRSTG
Trigger: TCCAGTGCTCCTTTGATGCCAGCGGCACCCTGACCC...AGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp TGCTCCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTTGGCCAGACACAAGTaGCTGTCATCCTCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: CSLGLPAYKVRALGLGHPLARHK*LSSSRV
Trigger: CACCCGGGAGGATGACAGGCACTTGTGTCTGGCCAA...AGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp TGCTCCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTGCAGCATCTTGTTCTTaGAGTCCCGCAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: CSLGLPAYKVRALGLGHPAASCS*SPAAQQ
Trigger: CTGCTGAGCTGCGGGACTTCAAGAACAAGATGCTGC...AGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCTACTCCACAAGGTGGTaGTGCTGTCCTTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: PWACPHTRLEPWVWGILSYSTRW*CCPWRG
Trigger: ACCCCTCCAAGGACAGCAGCACCACCTTGTGGAGTA...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCGGTGTGTCCCACTGCTaGTCTGTGTCCAGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: PWACPHTRLEPWVWGILSGVSHC*SVSSVC
Trigger: ACAGACACTGGACACAGAGCAGCAGTGGGACACACC...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCGGGAAAATAAGGGAGTaGTGCCCGTTCAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PWACPHTRLEPWVWGILSGKIRE*CPFRGQ
Trigger: CTGACCCCTGAACGGGCAGCACTCCCTTATTTTCCC...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCTGGCAGCCTGGAGAGTaGTGCCAGAGTAGAAGGAAC +
Preference number: 4 (lower is better)
Translates to: PWACPHTRLEPWVWGILSWQPGE*CQSRRN
Trigger: GTTCCTTCTACTCTGGCACCACTCTCCAGGCTGCCA...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCGGTTATAGCGGAGGCTaGCATGGGCACCATATCTGC +
Preference number: 4 (lower is better)
Translates to: PWACPHTRLEPWVWGILSGYSGG*HGHHIC
Trigger: GCAGATATGGTGCCCATGCCAGCCTCCGCTATAACC...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TGCTCCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTACAAGGTTAGAGCCCTaGGTCTGGGGCATCCTTAGC +
Preference number: 4 (lower is better)
Translates to: CSLGLPAYKVRALGLGHPTRLEP*VWGILS
Trigger: GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT...AGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp TGCTCCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTGAGGGGTCCCGACCATaGCAAAAGGAACAAGATGAG +
Preference number: 4 (lower is better)
Translates to: CSLGLPAYKVRALGLGHPEGSRP*QKEQDE
Trigger: CTCATCTTGTTCCTTTTGTCATGGTCGGGACCCCTC...AGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp TGCTCCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTGGGGCATCCTTAGCCTaGAATTTGTTGACATGGGGC +
Preference number: 4 (lower is better)
Translates to: CSLGLPAYKVRALGLGHPGASLA*NLLTWG
Trigger: GCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCC...AGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp TGCTCCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTAAGCGCATGAAGGTGTaGAGAGGTCTCTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: CSLGLPAYKVRALGLGHPKRMKV*RGLCSL
Trigger: AAGGGAGCAGAGACCTCTTCACACCTTCATGCGCTT...AGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369551.5
CDS-3UTR GCA 90 bp TGCTCCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTCAGCCTGGAGAGTGGTaGCAGAGTAGAAGGAACGTA +
Preference number: 4 (lower is better)
Translates to: CSLGLPAYKVRALGLGHPQPGEW*QSRRNV
Trigger: TACGTTCCTTCTACTCTGGCACCACTCTCCAGGCTG...AGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCATGTACTCCACAAGGTaGTGCTGCTGTCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: PWACPHTRLEPWVWGILSMYSTR*CCCPWR
Trigger: CCTCCAAGGACAGCAGCACCACCTTGTGGAGTACAT...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp TGCTCCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTCATGGGCACCATATCTaGGGGGAAAATAAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: CSLGLPAYKVRALGLGHPHGHHI*GENKGV
Trigger: CACTCCCTTATTTTCCCCGCAGATATGGTGCCCATG...AGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCTGCCACCTCCAGCAGTaGCAGCATCTTGTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: PWACPHTRLEPWVWGILSCHLQQ*QHLVLE
Trigger: TTCAAGAACAAGATGCTGCCACTGCTGGAGGTGGCA...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp TTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGAAGAACACTGCTGCCTaGTCCCTGGGCCTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: LEPWVWGILSLKFVDMGQKNTAA*SLGLPA
Trigger: TGCGGGCAGGCCCAGGGAGCAGGCAGCAGTGTTCTT...CTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp AACAATGTGGAGAAAGTCCTGTTCCTCAGGACACTGAAGGGAGGAGTGAGGAAGGGGTGCTGGGCCCCATaGCAGCCTGGAGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: NNVEKVLFLRTLKGGVRKGCWAP*QPGEWC
Trigger: GCACCACTCTCCAGGCTGCCATGGGGCCCAGCACCC...CTTCCTCACTCCTCCCTTCAGTGTCCTGAGGAACAGGACTTTCTCCACATTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGTGCTGGGCCCCATaGCAGCCTGGAGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMGCWAP*QPGEWC
Trigger: GCACCACTCTCCAGGCTGCCATGGGGCCCAGCACCC...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCAAGAGAGGACAGAGCTaGACGTCTCCTCCTATTTCT +
Preference number: 4 (lower is better)
Translates to: PWACPHTRLEPWVWGILSKRGQS*TSPPIS
Trigger: AGAAATAGGAGGAGACGTCCAGCTCTGTCCTCTCTT...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp GGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGGAGAGCAGGAGGGAACATCTCTGGTCCTGGCACTaGGCCAGCCGTTCCCCGACT +
Preference number: 4 (lower is better)
Translates to: GILSLKFVDMGQESRREHLWSWH*ASRSPT
Trigger: AGTCGGGGAACGGCTGGCCCAGTGCCAGGACCAGAG...ATGTTCCCTCCTGCTCTCCTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369551.5
CDS-3UTR GCA 90 bp TTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGTCCACAAGGTGGTGCTaGTGTCCTTGGAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LEPWVWGILSLKFVDMGQSTRWC*CPWRGP
Trigger: GGGACCCCTCCAAGGACAGCAGCACCACCTTGTGGA...CTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGGCCCCAGTGGATCCTTaGTCCATAGACCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LEPWVWGILSLKFVDMGQAPVDP*SIDQLG
Trigger: GCCCAGCTGGTCTATGGACCAAGGATCCACTGGGGC...CTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGGCATCAAAGGAGCACTaGATGCGGGCCCGACTGGCA +
Preference number: 4 (lower is better)
Translates to: LEPWVWGILSLKFVDMGQASKEH*MRARLA
Trigger: TGCCAGTCGGGCCCGCATCCAGTGCTCCTTTGATGC...CTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp GGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGGAGAGCAGGAGGGAACATGGCCTCAGTTCTGAGTaGCTCCCGCTCCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: GILSLKFVDMGQESRREHGLSSE*LPLLLC
Trigger: GCAGAGAAGGAGCGGGAGGCACTCAGAACTGAGGCC...ATGTTCCCTCCTGCTCTCCTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp TTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGTTGGCCAGACACAAGTaGCTGTCATCCTCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: LEPWVWGILSLKFVDMGQLARHK*LSSSRV
Trigger: CACCCGGGAGGATGACAGGCACTTGTGTCTGGCCAA...CTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp GGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGGAGAGCAGGAGGGAACATCCTGCTCCCTGGGCCTaGCCGCATACAAGGTTAGAG +
Preference number: 4 (lower is better)
Translates to: GILSLKFVDMGQESRREHPAPWA*PHTRLE
Trigger: CTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCAGG...ATGTTCCCTCCTGCTCTCCTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp AACAATGTGGAGAAAGTCCTGTTCCTCAGGACACTGAAGGGAGGAGTGAGGAAGAAGAACACTGCTGCCTaGTCCCTGGGCCTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: NNVEKVLFLRTLKGGVRKKNTAA*SLGLPA
Trigger: TGCGGGCAGGCCCAGGGAGCAGGCAGCAGTGTTCTT...CTTCCTCACTCCTCCCTTCAGTGTCCTGAGGAACAGGACTTTCTCCACATTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGCGACTACTCTGGTCCTaGCACTGGGCCAGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMRLLWS*HWASRS
Trigger: GGAACGGCTGGCCCAGTGCCAGGACCAGAGTAGTCG...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGCATGCCGACTACTCTaGTCCTGGCACTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMACRLL*SWHWAS
Trigger: GCTGGCCCAGTGCCAGGACCAGAGTAGTCGGCATGC...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp GGAGGGAACATTGAGGGTTTTGACTCTTCGGGCTCTAAAAGGATTACTCAGGATGCTTTGGAGGCGGGGTaGGGGCGGTGCCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GGNIEGFDSSGSKRITQDALEAG*GRCLLS
Trigger: GGAGAGAAGGCACCGCCCCCACCCCGCCTCCAAAGC...ATCCTGAGTAATCCTTTTAGAGCCCGAAGAGTCAAAACCCTCAATGTTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000393300.6
CDS-3UTR TCA 90 bp TTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGGCAGCATCTTGTTCTTaGAGTCCCGCAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LEPWVWGILSLKFVDMGQAASCS*SPAAQQ
Trigger: CTGCTGAGCTGCGGGACTTCAAGAACAAGATGCTGC...CTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGTGTCGGCCTCAGTTCTaGGTGCCTCCCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMCRPQF*VPPAPS
Trigger: AGAAGGAGCGGGAGGCACTCAGAACTGAGGCCGACA...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp TTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGCTCTGCTGGGAATACTaGGCTGTCCACCACTGTTCG +
Preference number: 4 (lower is better)
Translates to: LEPWVWGILSLKFVDMGQLCWEY*AVHHCS
Trigger: CGAACAGTGGTGGACAGCTCAGTATTCCCAGCAGAG...CTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGCCTCAGTTCTGAGTaGCTCCCGCTCCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMGLSSE*LPLLLC
Trigger: GCAGAGAAGGAGCGGGAGGCACTCAGAACTGAGGCC...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGATACCAGCTGCCCTGTaGCTACCCAGGGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMIPAAL*LPRGRA
Trigger: TGCCCTTCCCCTGGGTAGGCACAGGGCAGCTGGTAT...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp AACAATGTGGAGAAAGTCCTGTTCCTCAGGACACTGAAGGGAGGAGTGAGGAAGCCTGCTCCCTGGGCCTaGCCGCATACAAGGTTAGAG +
Preference number: 4 (lower is better)
Translates to: NNVEKVLFLRTLKGGVRKPAPWA*PHTRLE
Trigger: CTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCAGG...CTTCCTCACTCCTCCCTTCAGTGTCCTGAGGAACAGGACTTTCTCCACATTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGTGGCAGCCTGGAGAGTaGTGCCAGAGTAGAAGGAAC +
Preference number: 4 (lower is better)
Translates to: LEPWVWGILSLKFVDMGQWQPGE*CQSRRN
Trigger: GTTCCTTCTACTCTGGCACCACTCTCCAGGCTGCCA...CTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGTGTCATCCTCCCGGGTaGCATAGACAGCCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LEPWVWGILSLKFVDMGQCHPPG*HRQPKD
Trigger: GTCTTTGGGCTGTCTATGCCACCCGGGAGGATGACA...CTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp AACAATGTGGAGAAAGTCCTGTTCCTCAGGACACTGAAGGGAGGAGTGAGGAAGGGATGCGGGCCCGACTaGCAGGACGGGTGTTATAGA +
Preference number: 4 (lower is better)
Translates to: NNVEKVLFLRTLKGGVRKGCGPD*QDGCYR
Trigger: TCTATAACACCCGTCCTGCCAGTCGGGCCCGCATCC...CTTCCTCACTCCTCCCTTCAGTGTCCTGAGGAACAGGACTTTCTCCACATTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGACAAGGTTAGAGCCCTaGGTCTGGGGCATCCTTAGC +
Preference number: 4 (lower is better)
Translates to: LEPWVWGILSLKFVDMGQTRLEP*VWGILS
Trigger: GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT...CTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp TGCTCCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTGGAGCTGAAAGAATTTaGTTGCCATTGGCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: CSLGLPAYKVRALGLGHPGAERI*LPLAKN
Trigger: ATTTTTAGCCAATGGCAATCAAATTCTTTCAGCTCC...AGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp GGAGGGAACATTGAGGGTTTTGACTCTTCGGGCTCTAAAAGGATTACTCAGGATTGGGCCAGCCGTTCCTaGAGGGATGGGGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: GGNIEGFDSSGSKRITQDWASRS*RDGGSG
Trigger: TCCTGATCCCCCATCCCTTCAGGAACGGCTGGCCCA...ATCCTGAGTAATCCTTTTAGAGCCCGAAGAGTCAAAACCCTCAATGTTCCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393300.6
CDS-3UTR GCA 90 bp TTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGCAGCCTGGAGAGTGGTaGCAGAGTAGAAGGAACGTA +
Preference number: 4 (lower is better)
Translates to: LEPWVWGILSLKFVDMGQQPGEW*QSRRNV
Trigger: TACGTTCCTTCTACTCTGGCACCACTCTCCAGGCTG...CTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCTGGAATTTGATTAGCTaGAAAGTGTTCTCCATCTCA +
Preference number: 4 (lower is better)
Translates to: PWACPHTRLEPWVWGILSWNLIS*KVFSIS
Trigger: TGAGATGGAGAACACTTTGCAGCTAATCAAATTCCA...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp GGAGGGAACATTGAGGGTTTTGACTCTTCGGGCTCTAAAAGGATTACTCAGGATCAAAGGAGCACTGGATaGGGGCCCGACTGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: GGNIEGFDSSGSKRITQDQRSTG*GPDWQD
Trigger: GTCCTGCCAGTCGGGCCCGCATCCAGTGCTCCTTTG...ATCCTGAGTAATCCTTTTAGAGCCCGAAGAGTCAAAACCCTCAATGTTCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp GGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGGAGAGCAGGAGGGAACATGGGAAAATAAGGGAGTaGTGCCCGTTCAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GILSLKFVDMGQESRREHGKIRE*CPFRGQ
Trigger: CTGACCCCTGAACGGGCAGCACTCCCTTATTTTCCC...ATGTTCCCTCCTGCTCTCCTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp AACAATGTGGAGAAAGTCCTGTTCCTCAGGACACTGAAGGGAGGAGTGAGGAAGGATCAGGAGGGAGGCTaGAGGGTTACAACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: NNVEKVLFLRTLKGGVRKDQEGG*RVTTPR
Trigger: CCTGGGAGTTGTAACCCTGCAGCCTCCCTCCTGATC...CTTCCTCACTCCTCCCTTCAGTGTCCTGAGGAACAGGACTTTCTCCACATTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393300.6
CDS-3UTR TCA 90 bp GGAGGGAACATTGAGGGTTTTGACTCTTCGGGCTCTAAAAGGATTACTCAGGATCAGCCATGGCAAGGGTaGAGTCACGCAGCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: GGNIEGFDSSGSKRITQDQPWQG*SHAALG
Trigger: TCCCAAGGCTGCGTGACTTCACCCTTGCCATGGCTG...ATCCTGAGTAATCCTTTTAGAGCCCGAAGAGTCAAAACCCTCAATGTTCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp AACAATGTGGAGAAAGTCCTGTTCCTCAGGACACTGAAGGGAGGAGTGAGGAAGTACTCCACAAGGTGGTaGTGCTGTCCTTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: NNVEKVLFLRTLKGGVRKYSTRW*CCPWRG
Trigger: ACCCCTCCAAGGACAGCAGCACCACCTTGTGGAGTA...CTTCCTCACTCCTCCCTTCAGTGTCCTGAGGAACAGGACTTTCTCCACATTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGTACTCCACAAGGTGGTaGTGCTGTCCTTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMYSTRW*CCPWRG
Trigger: ACCCCTCCAAGGACAGCAGCACCACCTTGTGGAGTA...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp GGAGGGAACATTGAGGGTTTTGACTCTTCGGGCTCTAAAAGGATTACTCAGGATGGCCTCAGTTCTGAGTaGCTCCCGCTCCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: GGNIEGFDSSGSKRITQDGLSSE*LPLLLC
Trigger: GCAGAGAAGGAGCGGGAGGCACTCAGAACTGAGGCC...ATCCTGAGTAATCCTTTTAGAGCCCGAAGAGTCAAAACCCTCAATGTTCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp GGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGGAGAGCAGGAGGGAACATACCTTCCTCATCAGCTaGCAGGTCGATGTAGGTGTC +
Preference number: 4 (lower is better)
Translates to: GILSLKFVDMGQESRREHTFLIS*QVDVGV
Trigger: GACACCTACATCGACCTGGCAGCTGATGAGGAAGGT...ATGTTCCCTCCTGCTCTCCTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGCATGGTGTGTCCCACTaGTGCTCTGTGTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMHGVSH*CSVSSV
Trigger: GACACTGGACACAGAGCAGCAGTGGGACACACCATG...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp TTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGCATGGGCACCATATCTaGGGGGAAAATAAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: LEPWVWGILSLKFVDMGQHGHHI*GENKGV
Trigger: CACTCCCTTATTTTCCCCGCAGATATGGTGCCCATG...CTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp GGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGGAGAGCAGGAGGGAACATATGTACTCCACAAGGTaGTGCTGCTGTCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GILSLKFVDMGQESRREHMYSTR*CCCPWR
Trigger: CCTCCAAGGACAGCAGCACCACCTTGTGGAGTACAT...ATGTTCCCTCCTGCTCTCCTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGTGCCACCTCCAGCAGTaGCAGCATCTTGTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: LEPWVWGILSLKFVDMGQCHLQQ*QHLVLE
Trigger: TTCAAGAACAAGATGCTGCCACTGCTGGAGGTGGCA...CTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp GGAGGGAACATTGAGGGTTTTGACTCTTCGGGCTCTAAAAGGATTACTCAGGATGCCCCAGTGGATCCTTaGTCCATAGACCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GGNIEGFDSSGSKRITQDAPVDP*SIDQLG
Trigger: GCCCAGCTGGTCTATGGACCAAGGATCCACTGGGGC...ATCCTGAGTAATCCTTTTAGAGCCCGAAGAGTCAAAACCCTCAATGTTCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp GGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGGAGAGCAGGAGGGAACATATTCTCTCTGGGACATaGTGTGTCCCACTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GILSLKFVDMGQESRREHILSGT*CVPLLL
Trigger: GAGCAGCAGTGGGACACACCATGTCCCAGAGAGAAT...ATGTTCCCTCCTGCTCTCCTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp GGAGGGAACATTGAGGGTTTTGACTCTTCGGGCTCTAAAAGGATTACTCAGGATGGATGCGGGCCCGACTaGCAGGACGGGTGTTATAGA +
Preference number: 4 (lower is better)
Translates to: GGNIEGFDSSGSKRITQDGCGPD*QDGCYR
Trigger: TCTATAACACCCGTCCTGCCAGTCGGGCCCGCATCC...ATCCTGAGTAATCCTTTTAGAGCCCGAAGAGTCAAAACCCTCAATGTTCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGAGGGGTCCCGACCATaGCAAAAGGAACAAGATGAG +
Preference number: 4 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMEGSRP*QKEQDE
Trigger: CTCATCTTGTTCCTTTTGTCATGGTCGGGACCCCTC...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp AACAATGTGGAGAAAGTCCTGTTCCTCAGGACACTGAAGGGAGGAGTGAGGAAGGGGGCATCCTTAGCCTaGAATTTGTTGACATGGGGC +
Preference number: 4 (lower is better)
Translates to: NNVEKVLFLRTLKGGVRKGASLA*NLLTWG
Trigger: GCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCC...CTTCCTCACTCCTCCCTTCAGTGTCCTGAGGAACAGGACTTTCTCCACATTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp AACAATGTGGAGAAAGTCCTGTTCCTCAGGACACTGAAGGGAGGAGTGAGGAAGGCAGGTCTAAGCGCATaGAGGTGTGAAGAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: NNVEKVLFLRTLKGGVRKAGLSA*RCEEVS
Trigger: AGAGACCTCTTCACACCTTCATGCGCTTAGACCTGC...CTTCCTCACTCCTCCCTTCAGTGTCCTGAGGAACAGGACTTTCTCCACATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369551.5
CDS-3UTR GCA 90 bp AACAATGTGGAGAAAGTCCTGTTCCTCAGGACACTGAAGGGAGGAGTGAGGAAGAAAATAAGGGAGTGCTaGCCGTTCAGGGGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: NNVEKVLFLRTLKGGVRKKIREC*PFRGQG
Trigger: ACCCTGACCCCTGAACGGGCAGCACTCCCTTATTTT...CTTCCTCACTCCTCCCTTCAGTGTCCTGAGGAACAGGACTTTCTCCACATTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGAAAATAAGGGAGTGCTaGCCGTTCAGGGGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMKIREC*PFRGQG
Trigger: ACCCTGACCCCTGAACGGGCAGCACTCCCTTATTTT...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGATGTACTCCACAAGGTaGTGCTGCTGTCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMMYSTR*CCCPWR
Trigger: CCTCCAAGGACAGCAGCACCACCTTGTGGAGTACAT...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGAAGTCACGCAGCCTTaGGAAGACAAAGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMEVTQP*EDKGCV
Trigger: GACACAGCCTTTGTCTTCCCAAGGCTGCGTGACTTC...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGTTAGAGCCCTGGGTCTaGGGCATCCTTAGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMLEPWV*GILSLK
Trigger: TTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
3UTR CAA 72 bp CATGGGGCAGGAGAGCAGGAGGGAACATTGAGGGTTTaGACTCTTCGGGCTCTAAAAGGATTACTCAGGATC +
Preference number: 4 (lower is better)
Translates to: HGAGEQEGTLRV*TLRALKGLLRI
Trigger: GATCCTGAGTAATCCTTTTAGAGCCCGAAGAGTCAAAACCCTCAATGTTCCCTCCTGCTCTCCTGCCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp GGAGGGAACATTGAGGGTTTTGACTCTTCGGGCTCTAAAAGGATTACTCAGGATGGTGTGTCCCACTGCTaGTCTGTGTCCAGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: GGNIEGFDSSGSKRITQDGVSHC*SVSSVC
Trigger: ACAGACACTGGACACAGAGCAGCAGTGGGACACACC...ATCCTGAGTAATCCTTTTAGAGCCCGAAGAGTCAAAACCCTCAATGTTCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCCATTGGCTACGACTACTCTGGTCCTaGCACTGGGCCAGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: SGVPYETKELKEFDCHWLRLLWS*HWASRS
Trigger: GGAACGGCTGGCCCAGTGCCAGGACCAGAGTAGTCG...TAGCCAATGGCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGTGCCACCTCCAGCAGTaGCAGCATCTTGTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMCHLQQ*QHLVLE
Trigger: TTCAAGAACAAGATGCTGCCACTGCTGGAGGTGGCA...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp GGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGGAGAGCAGGAGGGAACATTCTGTGGATCTAACTTaGCCAGACACAAGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: GILSLKFVDMGQESRREHSVDLT*PDTSAC
Trigger: ACAGGCACTTGTGTCTGGCCAAGTTAGATCCACAGA...ATGTTCCCTCCTGCTCTCCTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp GGAGGGAACATTGAGGGTTTTGACTCTTCGGGCTCTAAAAGGATTACTCAGGATGAGGGGTCCCGACCATaGCAAAAGGAACAAGATGAG +
Preference number: 4 (lower is better)
Translates to: GGNIEGFDSSGSKRITQDEGSRP*QKEQDE
Trigger: CTCATCTTGTTCCTTTTGTCATGGTCGGGACCCCTC...ATCCTGAGTAATCCTTTTAGAGCCCGAAGAGTCAAAACCCTCAATGTTCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp TCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCCATTGGCTATGTCGGCCTCAGTTCTaGGTGCCTCCCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SGVPYETKELKEFDCHWLCRPQF*VPPAPS
Trigger: AGAAGGAGCGGGAGGCACTCAGAACTGAGGCCGACA...TAGCCAATGGCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp TTGCCATTGGCTAAAAATATAGAGGATTTGAGCCACAACTGGCCCACATTTGAACAGCCATGGCAAGGGTaGAGTCACGCAGCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LPLAKNIEDLSHNWPTFEQPWQG*SHAALG
Trigger: TCCCAAGGCTGCGTGACTTCACCCTTGCCATGGCTG...TTCAAATGTGGGCCAGTTGTGGCTCAAATCCTCTATATTTTTAGCCAATGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp TCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCCATTGGCTACAGCCATGGCAAGGGTaGAGTCACGCAGCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: SGVPYETKELKEFDCHWLQPWQG*SHAALG
Trigger: TCCCAAGGCTGCGTGACTTCACCCTTGCCATGGCTG...TAGCCAATGGCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp TTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGATCTGGAGTTCCGTATaGAACAAAGGAGCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: LEPWVWGILSLKFVDMGQIWSSV*NKGAER
Trigger: TCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGAT...CTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp TACTCAGGATCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCTCCACAAGGTGGTGCTaGTGTCCTTGGAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: YSGSGVPYETKELKEFDCSTRWC*CPWRGP
Trigger: GGGACCCCTCCAAGGACAGCAGCACCACCTTGTGGA...GCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGATCCTGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp TTGCCATTGGCTAAAAATATAGAGGATTTGAGCCACAACTGGCCCACATTTGAACGCAGCTCAGCAGCATaGCGACTACTCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LPLAKNIEDLSHNWPTFERSSAA*RLLWSW
Trigger: CCAGGACCAGAGTAGTCGGCATGCTGCTGAGCTGCG...TTCAAATGTGGGCCAGTTGTGGCTCAAATCCTCTATATTTTTAGCCAATGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp TCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCCATTGGCTAATACCAGCTGCCCTGTaGCTACCCAGGGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SGVPYETKELKEFDCHWLIPAAL*LPRGRA
Trigger: TGCCCTTCCCCTGGGTAGGCACAGGGCAGCTGGTAT...TAGCCAATGGCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp TTGCCATTGGCTAAAAATATAGAGGATTTGAGCCACAACTGGCCCACATTTGAACCACCATATACCAGCTaGCCTGTGCCTACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LPLAKNIEDLSHNWPTFEPPYTS*PVPTQG
Trigger: CCCCTGGGTAGGCACAGGGCAGCTGGTATATGGTGG...TTCAAATGTGGGCCAGTTGTGGCTCAAATCCTCTATATTTTTAGCCAATGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp GGAGGGAACATTGAGGGTTTTGACTCTTCGGGCTCTAAAAGGATTACTCAGGATACCTTCCTCATCAGCTaGCAGGTCGATGTAGGTGTC +
Preference number: 4 (lower is better)
Translates to: GGNIEGFDSSGSKRITQDTFLIS*QVDVGV
Trigger: GACACCTACATCGACCTGGCAGCTGATGAGGAAGGT...ATCCTGAGTAATCCTTTTAGAGCCCGAAGAGTCAAAACCCTCAATGTTCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp TTGCCATTGGCTAAAAATATAGAGGATTTGAGCCACAACTGGCCCACATTTGAAGTTCAGGGGTCAGGGTaGCGCTGGCATCAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: LPLAKNIEDLSHNWPTFEVQGSG*RWHQRS
Trigger: GCTCCTTTGATGCCAGCGGCACCCTGACCCCTGAAC...TTCAAATGTGGGCCAGTTGTGGCTCAAATCCTCTATATTTTTAGCCAATGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCCATTGGCTATGGTGCTGCTGTCCTTaGAGGGGTCCCGACCATGAC +
Preference number: 4 (lower is better)
Translates to: SGVPYETKELKEFDCHWLWCCCP*RGPDHD
Trigger: GTCATGGTCGGGACCCCTCCAAGGACAGCAGCACCA...TAGCCAATGGCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TTGCCATTGGCTAAAAATATAGAGGATTTGAGCCACAACTGGCCCACATTTGAATGGTGCTGCTGTCCTTaGAGGGGTCCCGACCATGAC +
Preference number: 4 (lower is better)
Translates to: LPLAKNIEDLSHNWPTFEWCCCP*RGPDHD
Trigger: GTCATGGTCGGGACCCCTCCAAGGACAGCAGCACCA...TTCAAATGTGGGCCAGTTGTGGCTCAAATCCTCTATATTTTTAGCCAATGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp GGAGGGAACATTGAGGGTTTTGACTCTTCGGGCTCTAAAAGGATTACTCAGGATGAAGTCACGCAGCCTTaGGAAGACAAAGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GGNIEGFDSSGSKRITQDEVTQP*EDKGCV
Trigger: GACACAGCCTTTGTCTTCCCAAGGCTGCGTGACTTC...ATCCTGAGTAATCCTTTTAGAGCCCGAAGAGTCAAAACCCTCAATGTTCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp AACAATGTGGAGAAAGTCCTGTTCCTCAGGACACTGAAGGGAGGAGTGAGGAAGTCTGTGGATCTAACTTaGCCAGACACAAGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: NNVEKVLFLRTLKGGVRKSVDLT*PDTSAC
Trigger: ACAGGCACTTGTGTCTGGCCAAGTTAGATCCACAGA...CTTCCTCACTCCTCCCTTCAGTGTCCTGAGGAACAGGACTTTCTCCACATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TACTCAGGATCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCGCATCAAAGGAGCACTaGATGCGGGCCCGACTGGCA +
Preference number: 4 (lower is better)
Translates to: YSGSGVPYETKELKEFDCASKEH*MRARLA
Trigger: TGCCAGTCGGGCCCGCATCCAGTGCTCCTTTGATGC...GCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGATCCTGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TTGCCATTGGCTAAAAATATAGAGGATTTGAGCCACAACTGGCCCACATTTGAAGCATCAAAGGAGCACTaGATGCGGGCCCGACTGGCA +
Preference number: 4 (lower is better)
Translates to: LPLAKNIEDLSHNWPTFEASKEH*MRARLA
Trigger: TGCCAGTCGGGCCCGCATCCAGTGCTCCTTTGATGC...TTCAAATGTGGGCCAGTTGTGGCTCAAATCCTCTATATTTTTAGCCAATGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCCATTGGCTAGGGTCAGGGTGCCGCTaGCATCAAAGGAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: SGVPYETKELKEFDCHWLGSGCR*HQRSTG
Trigger: TCCAGTGCTCCTTTGATGCCAGCGGCACCCTGACCC...TAGCCAATGGCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp TACTCAGGATCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCTTGGCCAGACACAAGTaGCTGTCATCCTCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: YSGSGVPYETKELKEFDCLARHK*LSSSRV
Trigger: CACCCGGGAGGATGACAGGCACTTGTGTCTGGCCAA...GCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGATCCTGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp GGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGGAGAGCAGGAGGGAACATTCTCGGACACTAAAATaGTACGGATCTCAACCTCTA +
Preference number: 4 (lower is better)
Translates to: GILSLKFVDMGQESRREHSRTLK*YGSQPL
Trigger: TAGAGGTTGAGATCCGTAGCATTTTAGTGTCCGAGA...ATGTTCCCTCCTGCTCTCCTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369551.5
CDS-3UTR CCA 90 bp TTGCCATTGGCTAAAAATATAGAGGATTTGAGCCACAACTGGCCCACATTTGAACTCTGGTCCTGGCACTaGGCCAGCCGTTCCTCTAAA +
Preference number: 4 (lower is better)
Translates to: LPLAKNIEDLSHNWPTFELWSWH*ASRSSK
Trigger: TTTAGAGGAACGGCTGGCCCAGTGCCAGGACCAGAG...TTCAAATGTGGGCCAGTTGTGGCTCAAATCCTCTATATTTTTAGCCAATGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320334.5
CDS-3UTR TCA 90 bp TCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCCATTGGCTACTCTGCTGGGAATACTaGGCTGTCCACCACTGTTCG +
Preference number: 4 (lower is better)
Translates to: SGVPYETKELKEFDCHWLLCWEY*AVHHCS
Trigger: CGAACAGTGGTGGACAGCTCAGTATTCCCAGCAGAG...TAGCCAATGGCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp TACTCAGGATCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCGGTGTGTCCCACTGCTaGTCTGTGTCCAGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: YSGSGVPYETKELKEFDCGVSHC*SVSSVC
Trigger: ACAGACACTGGACACAGAGCAGCAGTGGGACACACC...GCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGATCCTGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp TTGCCATTGGCTAAAAATATAGAGGATTTGAGCCACAACTGGCCCACATTTGAACATGGTGTGTCCCACTaGTGCTCTGTGTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LPLAKNIEDLSHNWPTFEHGVSH*CSVSSV
Trigger: GACACTGGACACAGAGCAGCAGTGGGACACACCATG...TTCAAATGTGGGCCAGTTGTGGCTCAAATCCTCTATATTTTTAGCCAATGGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp TACTCAGGATCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCGGGAAAATAAGGGAGTaGTGCCCGTTCAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: YSGSGVPYETKELKEFDCGKIRE*CPFRGQ
Trigger: CTGACCCCTGAACGGGCAGCACTCCCTTATTTTCCC...GCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGATCCTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TACTCAGGATCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCTGGCAGCCTGGAGAGTaGTGCCAGAGTAGAAGGAAC +
Preference number: 4 (lower is better)
Translates to: YSGSGVPYETKELKEFDCWQPGE*CQSRRN
Trigger: GTTCCTTCTACTCTGGCACCACTCTCCAGGCTGCCA...GCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGATCCTGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCCATTGGCTAGGTTATAGCGGAGGCTaGCATGGGCACCATATCTGC +
Preference number: 4 (lower is better)
Translates to: SGVPYETKELKEFDCHWLGYSGG*HGHHIC
Trigger: GCAGATATGGTGCCCATGCCAGCCTCCGCTATAACC...TAGCCAATGGCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TTGCCATTGGCTAAAAATATAGAGGATTTGAGCCACAACTGGCCCACATTTGAAACAAGGTTAGAGCCCTaGGTCTGGGGCATCCTTAGC +
Preference number: 4 (lower is better)
Translates to: LPLAKNIEDLSHNWPTFETRLEP*VWGILS
Trigger: GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT...TTCAAATGTGGGCCAGTTGTGGCTCAAATCCTCTATATTTTTAGCCAATGGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGCAATACAAAACAATGTaGAGAAAGTCCTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LEPWVWGILSLKFVDMGQQYKTM*RKSCSS
Trigger: TGAGGAACAGGACTTTCTCCACATTGTTTTGTATTG...CTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp TTGCCATTGGCTAAAAATATAGAGGATTTGAGCCACAACTGGCCCACATTTGAAACCTTCCTCATCAGCTaGCAGGTCGATGTAGGTGTC +
Preference number: 4 (lower is better)
Translates to: LPLAKNIEDLSHNWPTFETFLIS*QVDVGV
Trigger: GACACCTACATCGACCTGGCAGCTGATGAGGAAGGT...TTCAAATGTGGGCCAGTTGTGGCTCAAATCCTCTATATTTTTAGCCAATGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp TACTCAGGATCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCAAAATAAGGGAGTGCTaGCCGTTCAGGGGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: YSGSGVPYETKELKEFDCKIREC*PFRGQG
Trigger: ACCCTGACCCCTGAACGGGCAGCACTCCCTTATTTT...GCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGATCCTGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TTGCCATTGGCTAAAAATATAGAGGATTTGAGCCACAACTGGCCCACATTTGAAGAAGTCACGCAGCCTTaGGAAGACAAAGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: LPLAKNIEDLSHNWPTFEEVTQP*EDKGCV
Trigger: GACACAGCCTTTGTCTTCCCAAGGCTGCGTGACTTC...TTCAAATGTGGGCCAGTTGTGGCTCAAATCCTCTATATTTTTAGCCAATGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCCATTGGCTAATTCTCTCTGGGACATaGTGTGTCCCACTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SGVPYETKELKEFDCHWLILSGT*CVPLLL
Trigger: GAGCAGCAGTGGGACACACCATGTCCCAGAGAGAAT...TAGCCAATGGCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TACTCAGGATCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCATTCTCTCTGGGACATaGTGTGTCCCACTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: YSGSGVPYETKELKEFDCILSGT*CVPLLL
Trigger: GAGCAGCAGTGGGACACACCATGTCCCAGAGAGAAT...GCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGATCCTGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp GGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGGAGAGCAGGAGGGAACATCAATACAAAACAATGTaGAGAAAGTCCTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: GILSLKFVDMGQESRREHQYKTM*RKSCSS
Trigger: TGAGGAACAGGACTTTCTCCACATTGTTTTGTATTG...ATGTTCCCTCCTGCTCTCCTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp AACAATGTGGAGAAAGTCCTGTTCCTCAGGACACTGAAGGGAGGAGTGAGGAAGCTTCAGAATCTTCATTaGTCTCACTTGAGAGATTGT +
Preference number: 4 (lower is better)
Translates to: NNVEKVLFLRTLKGGVRKLQNLH*SHLRDC
Trigger: ACAATCTCTCAAGTGAGATCAATGAAGATTCTGAAG...CTTCCTCACTCCTCCCTTCAGTGTCCTGAGGAACAGGACTTTCTCCACATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGTGGAATTTGATTAGCTaGAAAGTGTTCTCCATCTCA +
Preference number: 4 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMWNLIS*KVFSIS
Trigger: TGAGATGGAGAACACTTTGCAGCTAATCAAATTCCA...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR GCA 90 bp TACTCAGGATCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCCATGGGCACCATATCTaGGGGGAAAATAAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: YSGSGVPYETKELKEFDCHGHHI*GENKGV
Trigger: CACTCCCTTATTTTCCCCGCAGATATGGTGCCCATG...GCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGATCCTGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp AACAATGTGGAGAAAGTCCTGTTCCTCAGGACACTGAAGGGAGGAGTGAGGAAGCAATACAAAACAATGTaGAGAAAGTCCTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: NNVEKVLFLRTLKGGVRKQYKTM*RKSCSS
Trigger: TGAGGAACAGGACTTTCTCCACATTGTTTTGTATTG...CTTCCTCACTCCTCCCTTCAGTGTCCTGAGGAACAGGACTTTCTCCACATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TTGCCATTGGCTAAAAATATAGAGGATTTGAGCCACAACTGGCCCACATTTGAATCTGTGGATCTAACTTaGCCAGACACAAGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: LPLAKNIEDLSHNWPTFESVDLT*PDTSAC
Trigger: ACAGGCACTTGTGTCTGGCCAAGTTAGATCCACAGA...TTCAAATGTGGGCCAGTTGTGGCTCAAATCCTCTATATTTTTAGCCAATGGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CCA 90 bp TACTCAGGATCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCAAGAGAGGACAGAGCTaGACGTCTCCTCCTATTTCT +
Preference number: 4 (lower is better)
Translates to: YSGSGVPYETKELKEFDCKRGQS*TSPPIS
Trigger: AGAAATAGGAGGAGACGTCCAGCTCTGTCCTCTCTT...GCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGATCCTGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp GGAGGGAACATTGAGGGTTTTGACTCTTCGGGCTCTAAAAGGATTACTCAGGATCTTCAGAATCTTCATTaGTCTCACTTGAGAGATTGT +
Preference number: 4 (lower is better)
Translates to: GGNIEGFDSSGSKRITQDLQNLH*SHLRDC
Trigger: ACAATCTCTCAAGTGAGATCAATGAAGATTCTGAAG...ATCCTGAGTAATCCTTTTAGAGCCCGAAGAGTCAAAACCCTCAATGTTCCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp TCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCCATTGGCTATTGCCAGGTGGAATTTaGTTAGCTGCAAAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: SGVPYETKELKEFDCHWLLPGGI*LAAKCS
Trigger: AGAACACTTTGCAGCTAATCAAATTCCACCTGGCAA...TAGCCAATGGCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp TACTCAGGATCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCTTGCCAGGTGGAATTTaGTTAGCTGCAAAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: YSGSGVPYETKELKEFDCLPGGI*LAAKCS
Trigger: AGAACACTTTGCAGCTAATCAAATTCCACCTGGCAA...GCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGATCCTGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp TCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCCATTGGCTAATCTGGAGTTCCGTATaGAACAAAGGAGCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: SGVPYETKELKEFDCHWLIWSSV*NKGAER
Trigger: TCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGAT...TAGCCAATGGCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp TCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCCATTGGCTACTTCAGAATCTTCATTaGTCTCACTTGAGAGATTGT +
Preference number: 4 (lower is better)
Translates to: SGVPYETKELKEFDCHWLLQNLH*SHLRDC
Trigger: ACAATCTCTCAAGTGAGATCAATGAAGATTCTGAAG...TAGCCAATGGCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR TCA 90 bp TCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCCATTGGCTAGGAGCTGAAAGAATTTaGTTGCCATTGGCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: SGVPYETKELKEFDCHWLGAERI*LPLAKN
Trigger: ATTTTTAGCCAATGGCAATCAAATTCTTTCAGCTCC...TAGCCAATGGCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS GCA 90 bp CCCGTTCAGGGGTCAGGGTGCCGCTGGCATCAAAGGAGCACTGGATaGGGGCCCGACTGGCAGGACGGGTGTTATAGACGACATAGAGGG +
Preference number: 5 (lower is better)
Translates to: PVQGSGCRWHQRSTG*GPDWQDGCYRRHRG
Trigger: CCCTCTATGTCGTCTATAACACCCGTCCTGCCAGTCGGGCCCGCATCCAGTGCTCCTTTGATGCCAGCGGCACCCTGACCCCTGAACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS TCA 90 bp CCCGCTCCTTCTCTGCCACCTCCAGCAGTGGCAGCATCTTGTTCTTaGAGTCCCGCAGCTCAGCAGCATGCCGACTACTCTGGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: PAPSLPPPAVAASCS*SPAAQQHADYSGPG
Trigger: GCCAGGACCAGAGTAGTCGGCATGCTGCTGAGCTGCGGGACTTCAAGAACAAGATGCTGCCACTGCTGGAGGTGGCAGAGAAGGAGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS GCA 90 bp AGCAGTGGCAGCATCTTGTTCTTGAAGTCCCGCAGCTCAGCAGCATaGCGACTACTCTGGTCCTGGCACTGGGCCAGCCGTTCCCCGACT +
Preference number: 5 (lower is better)
Translates to: SSGSILFLKSRSSAA*RLLWSWHWASRSPT
Trigger: AGTCGGGGAACGGCTGGCCCAGTGCCAGGACCAGAGTAGTCGGCATGCTGCTGAGCTGCGGGACTTCAAGAACAAGATGCTGCCACTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369551.5
CDS-3UTR CAA 90 bp TGCTCCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTGGCAGCATCTTGTTCTaGAAGTCCCGCAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: CSLGLPAYKVRALGLGHPGSILF*KSRSSA
Trigger: TGCTGAGCTGCGGGACTTCAAGAACAAGATGCTGCC...AGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCAGCAGTGGCAGCATCTaGTTCTTGAAGTCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: PWACPHTRLEPWVWGILSSSGSI*FLKSRS
Trigger: GCTGCGGGACTTCAAGAACAAGATGCTGCCACTGCT...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS TCA 90 bp AGGGCACCCGGACTCGGGAAGCTTTCCGGGCAGCCATGGCAAGGGTaGAGTCACGCAGCCTTGGGAAGACAAAGGCTGTGTCATTCTGTG +
Preference number: 5 (lower is better)
Translates to: RAPGLGKLSGQPWQG*SHAALGRQRLCHSV
Trigger: CACAGAATGACACAGCCTTTGTCTTCCCAAGGCTGCGTGACTTCACCCTTGCCATGGCTGCCCGGAAAGCTTCCCGAGTCCGGGTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS GCA 90 bp GGAGATGGTGTCGGCCTCAGTTCTGAGTGCCTCCCGCTCCTTCTCTaGCACCTCCAGCAGTGGCAGCATCTTGTTCTTGAAGTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: GDGVGLSSECLPLLL*HLQQWQHLVLEVPQ
Trigger: CTGCGGGACTTCAAGAACAAGATGCTGCCACTGCTGGAGGTGGCAGAGAAGGAGCGGGAGGCACTCAGAACTGAGGCCGACACCATCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS GCA 90 bp GCCTCCGAGCAAAATAAAGAAAGCCACCATATACCAGCTGCCCTGTaGCTACCCAGGGGAAGGGCACCCGGACTCGGGAAGCTTTCCGGG +
Preference number: 5 (lower is better)
Translates to: ASEQNKESHHIPAAL*LPRGRAPGLGKLSG
Trigger: CCCGGAAAGCTTCCCGAGTCCGGGTGCCCTTCCCCTGGGTAGGCACAGGGCAGCTGGTATATGGTGGCTTTCTTTATTTTGCTCGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS CCA 90 bp ATCTTGTTCTTGAAGTCCCGCAGCTCAGCAGCATGCCGACTACTCTaGTCCTGGCACTGGGCCAGCCGTTCCCCGACTCCATGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: ILFLKSRSSAACRLL*SWHWASRSPTPCPP
Trigger: TGGAGGACATGGAGTCGGGGAACGGCTGGCCCAGTGCCAGGACCAGAGTAGTCGGCATGCTGCTGAGCTGCGGGACTTCAAGAACAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369551.5
CDS-3UTR CAA 90 bp TGCTCCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTGAGCAGGAGGGAACATaGAGGGTTTTGACTCTTCGG +
Preference number: 5 (lower is better)
Translates to: CSLGLPAYKVRALGLGHPEQEGT*RVLTLR
Trigger: CCGAAGAGTCAAAACCCTCAATGTTCCCTCCTGCTC...AGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCGTAGATCTTCTCTGTTaGCCCCAGTGGATCCTTGGT +
Preference number: 5 (lower is better)
Translates to: PWACPHTRLEPWVWGILSVDLLC*PQWILG
Trigger: ACCAAGGATCCACTGGGGCAAACAGAGAAGATCTAC...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS GCA 90 bp AGCAGTGGCAGCATCTTGTTCTTGAAGTCCCGCAGCTCAGCAGCATaGCGACTACTCTGGTCCTGGCACTGGGCCAGCCGTTCCTCTAAA +
Preference number: 5 (lower is better)
Translates to: SSGSILFLKSRSSAA*RLLWSWHWASRSSK
Trigger: TTTAGAGGAACGGCTGGCCCAGTGCCAGGACCAGAGTAGTCGGCATGCTGCTGAGCTGCGGGACTTCAAGAACAAGATGCTGCCACTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320334.5
ENST00000491700.1
CDS CCA 90 bp ATCTTGTTCTTGAAGTCCCGCAGCTCAGCAGCATGCCGACTACTCTaGTCCTGGCACTGGGCCAGCCGTTCCTCTAAAGCAGCTAGTCGG +
Preference number: 5 (lower is better)
Translates to: ILFLKSRSSAACRLL*SWHWASRSSKAASR
Trigger: CCGACTAGCTGCTTTAGAGGAACGGCTGGCCCAGTGCCAGGACCAGAGTAGTCGGCATGCTGCTGAGCTGCGGGACTTCAAGAACAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320334.5
ENST00000491700.1
CDS CCA 90 bp GCTAGTCGGCGTTCCATGTACTCCACAAGGTGGTGCTGCTGTCCTTaGAGGGGTCCCGACCATGACAAAAGGAACAAGATGAGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: ASRRSMYSTRWCCCP*RGPDHDKRNKMRRG
Trigger: CCCTCTCCTCATCTTGTTCCTTTTGTCATGGTCGGGACCCCTCCAAGGACAGCAGCACCACCTTGTGGAGTACATGGAACGCCGACTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS CCA 90 bp GTGGATCTAACTTGGCCAGACACAAGTGCCTGTCATCCTCCCGGGTaGCATAGACAGCCCAAAGACCTTCCTCATCAGCTGCCAGGTCGA +
Preference number: 5 (lower is better)
Translates to: VDLTWPDTSACHPPG*HRQPKDLPHQLPGR
Trigger: TCGACCTGGCAGCTGATGAGGAAGGTCTTTGGGCTGTCTATGCCACCCGGGAGGATGACAGGCACTTGTGTCTGGCCAAGTTAGATCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS CCA 90 bp GTGTGTCCCACTGCTGCTCTGTGTCCAGTGTCTGTGGATCTAACTTaGCCAGACACAAGTGCCTGTCATCCTCCCGGGTGGCATAGACAG +
Preference number: 5 (lower is better)
Translates to: VCPTAALCPVSVDLT*PDTSACHPPGWHRQ
Trigger: CTGTCTATGCCACCCGGGAGGATGACAGGCACTTGTGTCTGGCCAAGTTAGATCCACAGACACTGGACACAGAGCAGCAGTGGGACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS-3UTR CAA 90 bp TTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGTGCCCCAGTGGATCCTaGGTCCATAGACCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: LEPWVWGILSLKFVDMGQCPSGS*VHRPAG
Trigger: CCCAGCTGGTCTATGGACCAAGGATCCACTGGGGCA...CTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp TGCTCCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTGGAACATTGAGGGTTTaGACTCTTCGGGCTCTAAAA +
Preference number: 5 (lower is better)
Translates to: CSLGLPAYKVRALGLGHPGTLRV*TLRALK
Trigger: TTTTAGAGCCCGAAGAGTCAAAACCCTCAATGTTCC...AGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS CCA 90 bp CGTTCCTCTAAAGCAGCTAGTCGGCGTTCCATGTACTCCACAAGGTaGTGCTGCTGTCCTTGGAGGGGTCCCGACCATGACAAAAGGAAC +
Preference number: 5 (lower is better)
Translates to: RSSKAASRRSMYSTR*CCCPWRGPDHDKRN
Trigger: GTTCCTTTTGTCATGGTCGGGACCCCTCCAAGGACAGCAGCACCACCTTGTGGAGTACATGGAACGCCGACTAGCTGCTTTAGAGGAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320334.5
ENST00000491700.1
CDS CCA 90 bp CACTCCTCTAAAGCAGCTAGTCGGCGTTCCATGTACTCCACAAGGTaGTGCTGCTGTCCTTGGAGGGGTCCCGACCATGACAAAAGGAAC +
Preference number: 5 (lower is better)
Translates to: HSSKAASRRSMYSTR*CCCPWRGPDHDKRN
Trigger: GTTCCTTTTGTCATGGTCGGGACCCCTCCAAGGACAGCAGCACCACCTTGTGGAGTACATGGAACGCCGACTAGCTGCTTTAGAGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393300.6
CDS-3UTR CAA 90 bp GGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGGAGAGCAGGAGGGAACATCTTCTTCCCTTGCCTTaGGTCCCAGGGCCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: GILSLKFVDMGQESRREHLLPLP*VPGPPV
Trigger: GACTGGAGGCCCTGGGACCAAAGGCAAGGGAAGAAG...ATGTTCCCTCCTGCTCTCCTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCTTTGCCAGGTGGAATTaGATTAGCTGCAAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: PWACPHTRLEPWVWGILSFARWN*ISCKVF
Trigger: GAACACTTTGCAGCTAATCAAATTCCACCTGGCAAA...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp CCCTGGGCCTGCCCGCATACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCACAACTGGCCCACATTaGAAGAATGAGGAACAAGAA +
Preference number: 5 (lower is better)
Translates to: PWACPHTRLEPWVWGILSTTGPH*KNEEQE
Trigger: TTCTTGTTCCTCATTCTTCAAATGTGGGCCAGTTGT...GCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS GCA 90 bp TCCTCTAAAGCAGCTAGTCGGCGTTCCATGTACTCCACAAGGTGGTaGTGCTGTCCTTGGAGGGGTCCCGACCATGACAAAAGGAACAAG +
Preference number: 5 (lower is better)
Translates to: SSKAASRRSMYSTRW*CCPWRGPDHDKRNK
Trigger: CTTGTTCCTTTTGTCATGGTCGGGACCCCTCCAAGGACAGCAGCACCACCTTGTGGAGTACATGGAACGCCGACTAGCTGCTTTAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000393300.6
ENST00000491700.1
CDS GCA 90 bp ACCTCTAAAGCAGCTAGTCGGCGTTCCATGTACTCCACAAGGTGGTaGTGCTGTCCTTGGAGGGGTCCCGACCATGACAAAAGGAACAAG +
Preference number: 5 (lower is better)
Translates to: TSKAASRRSMYSTRW*CCPWRGPDHDKRNK
Trigger: CTTGTTCCTTTTGTCATGGTCGGGACCCCTCCAAGGACAGCAGCACCACCTTGTGGAGTACATGGAACGCCGACTAGCTGCTTTAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369551.5
CDS CCA 90 bp TCAACCTCTAAAGCAGCTAGTCGGCGTTCCATGTACTCCACAAGGTaGTGCTGCTGTCCTTGGAGGGGTCCCGACCATGACAAAAGGAAC +
Preference number: 5 (lower is better)
Translates to: STSKAASRRSMYSTR*CCCPWRGPDHDKRN
Trigger: GTTCCTTTTGTCATGGTCGGGACCCCTCCAAGGACAGCAGCACCACCTTGTGGAGTACATGGAACGCCGACTAGCTGCTTTAGAGGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369551.5
CDS CCA 90 bp CCACTCTCCTCTTGGTCCTGCCATTTCCTCAGGCGGGTGTCAGTATaGTCTTCCTCCATCCAAGGCTCTGCTAATCAGCTGAGAACTACG +
Preference number: 5 (lower is better)
Translates to: PLSSWSCHFLRRVSV*SSSIQGSANQLRTT
Trigger: CGTAGTTCTCAGCTGATTAGCAGAGCCTTGGATGGAGGAAGACCATACTGACACCCGCCTGAGGAAATGGCAGGACCAAGAGGAGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633022.1
CDS-3UTR CAA 90 bp TTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGGGCAGCATCTTGTTCTaGAAGTCCCGCAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: LEPWVWGILSLKFVDMGQGSILF*KSRSSA
Trigger: TGCTGAGCTGCGGGACTTCAAGAACAAGATGCTGCC...CTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGCTTCTTCCCTTGCCTTaGGTCCCAGGGCCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMLLPLP*VPGPPV
Trigger: GACTGGAGGCCCTGGGACCAAAGGCAAGGGAAGAAG...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGTGCCCCAGTGGATCCTaGGTCCATAGACCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMCPSGS*VHRPAG
Trigger: CCCAGCTGGTCTATGGACCAAGGATCCACTGGGGCA...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS TCA 90 bp ATAGTGAGCATTTGCCCAGTGGTTGCCTCCAATCTTAGGGAGAATTaGGAAAGAGCGGGTACCACAGCGGCCTGGATCCCCAGAACCTCT +
Preference number: 5 (lower is better)
Translates to: IVSICPVVASNLREN*ERAGTTAAWIPRTS
Trigger: AGAGGTTCTGGGGATCCAGGCCGCTGTGGTACCCGCTCTTTCTCAATTCTCCCTAAGATTGGAGGCAACCACTGGGCAAATGCTCACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491700.1
CDS GCA 90 bp TCTAAAGCAGCTAGTCGGCGTTCCATGTACTCCACAAGGTGGTGCTaGTGTCCTTGGAGGGGTCCCGACCATGACAAAAGGAACAAGATG +
Preference number: 5 (lower is better)
Translates to: SKAASRRSMYSTRWC*CPWRGPDHDKRNKM
Trigger: CATCTTGTTCCTTTTGTCATGGTCGGGACCCCTCCAAGGACAGCAGCACCACCTTGTGGAGTACATGGAACGCCGACTAGCTGCTTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS-3UTR CAA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGCAGCATCTTGTTCTaGAAGTCCCGCAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMGSILF*KSRSSA
Trigger: TGCTGAGCTGCGGGACTTCAAGAACAAGATGCTGCC...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp AACAATGTGGAGAAAGTCCTGTTCCTCAGGACACTGAAGGGAGGAGTGAGGAAGAGCAGTGGCAGCATCTaGTTCTTGAAGTCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: NNVEKVLFLRTLKGGVRKSSGSI*FLKSRS
Trigger: GCTGCGGGACTTCAAGAACAAGATGCTGCCACTGCT...CTTCCTCACTCCTCCCTTCAGTGTCCTGAGGAACAGGACTTTCTCCACATTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp GGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGGAGAGCAGGAGGGAACATGTCTGTGGATCTAACTaGGCCAGACACAAGTGCCTG +
Preference number: 5 (lower is better)
Translates to: GILSLKFVDMGQESRREHVCGSN*ARHKCL
Trigger: CAGGCACTTGTGTCTGGCCAAGTTAGATCCACAGAC...ATGTTCCCTCCTGCTCTCCTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS TCA 90 bp GGAATACTGAGCTGTCCACCACTGTTCGGTTTGCCAGGTGGAATTTaGTTAGCTGCAAAGTGTTCTCCATCTCACCACCTCCACCAGGTC +
Preference number: 5 (lower is better)
Translates to: GILSCPPLFGLPGGI*LAAKCSPSHHLHQV
Trigger: GACCTGGTGGAGGTGGTGAGATGGAGAACACTTTGCAGCTAATCAAATTCCACCTGGCAAACCGAACAGTGGTGGACAGCTCAGTATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS TCA 90 bp GGGTGTCAGTATGGTCTTCCTCCATCCAAGGCTCTGCTAATCAGCTaGGAACTACGCATGTGGGGAGGGATGATGAGCAGAAATAGTGGA +
Preference number: 5 (lower is better)
Translates to: GCQYGLPPSKALLIS*ELRMWGGMMSRNSG
Trigger: TCCACTATTTCTGCTCATCATCCCTCCCCACATGCGTAGTTCTCAGCTGATTAGCAGAGCCTTGGATGGAGGAAGACCATACTGACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633022.1
CDS-3UTR CAA 90 bp AACAATGTGGAGAAAGTCCTGTTCCTCAGGACACTGAAGGGAGGAGTGAGGAAGGTCTGTGGATCTAACTaGGCCAGACACAAGTGCCTG +
Preference number: 5 (lower is better)
Translates to: NNVEKVLFLRTLKGGVRKVCGSN*ARHKCL
Trigger: CAGGCACTTGTGTCTGGCCAAGTTAGATCCACAGAC...CTTCCTCACTCCTCCCTTCAGTGTCCTGAGGAACAGGACTTTCTCCACATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGTCTGTGGATCTAACTaGGCCAGACACAAGTGCCTG +
Preference number: 5 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMVCGSN*ARHKCL
Trigger: CAGGCACTTGTGTCTGGCCAAGTTAGATCCACAGAC...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS CCA 90 bp TCCCATCTAACACGTAGATCTTCTCTGTTTGCCCCAGTGGATCCTTaGTCCATAGACCAGCTGGGCCACCAAATCGCTTCAGAATCTTCA +
Preference number: 5 (lower is better)
Translates to: SHLTRRSSLFAPVDP*SIDQLGHQIASESS
Trigger: TGAAGATTCTGAAGCGATTTGGTGGCCCAGCTGGTCTATGGACCAAGGATCCACTGGGGCAAACAGAGAAGATCTACGTGTTAGATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS CCA 90 bp TCTGCTGGGAATACTGAGCTGTCCACCACTGTTCGGTTTGCCAGGTaGAATTTGATTAGCTGCAAAGTGTTCTCCATCTCACCACCTCCA +
Preference number: 5 (lower is better)
Translates to: SAGNTELSTTVRFAR*NLISCKVFSISPPP
Trigger: TGGAGGTGGTGAGATGGAGAACACTTTGCAGCTAATCAAATTCCACCTGGCAAACCGAACAGTGGTGGACAGCTCAGTATTCCCAGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS-3UTR CAA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGTAGATCTTCTCTGTTaGCCCCAGTGGATCCTTGGT +
Preference number: 5 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMVDLLC*PQWILG
Trigger: ACCAAGGATCCACTGGGGCAAACAGAGAAGATCTAC...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp TTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGGGCAGGGAACATTGAGGGTTTaGACTCTTCGGGCTCTAAAA +
Preference number: 5 (lower is better)
Translates to: LEPWVWGILSLKFVDMGQGTLRV*TLRALK
Trigger: TTTTAGAGCCCGAAGAGTCAAAACCCTCAATGTTCC...CTGCCCCATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp TCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCCATTGGCTACTTCTTCCCTTGCCTTaGGTCCCAGGGCCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: SGVPYETKELKEFDCHWLLLPLP*VPGPPV
Trigger: GACTGGAGGCCCTGGGACCAAAGGCAAGGGAAGAAG...TAGCCAATGGCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp TACTCAGGATCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCTGCCCCAGTGGATCCTaGGTCCATAGACCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: YSGSGVPYETKELKEFDCCPSGS*VHRPAG
Trigger: CCCAGCTGGTCTATGGACCAAGGATCCACTGGGGCA...GCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGATCCTGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp GGAGGGAACATTGAGGGTTTTGACTCTTCGGGCTCTAAAAGGATTACTCAGGATGAGCAGGAGGGAACATaGAGGGTTTTGACTCTTCGG +
Preference number: 5 (lower is better)
Translates to: GGNIEGFDSSGSKRITQDEQEGT*RVLTLR
Trigger: CCGAAGAGTCAAAACCCTCAATGTTCCCTCCTGCTC...ATCCTGAGTAATCCTTTTAGAGCCCGAAGAGTCAAAACCCTCAATGTTCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp AACAATGTGGAGAAAGTCCTGTTCCTCAGGACACTGAAGGGAGGAGTGAGGAAGATCTCACTTGAGAGATaGTGTAGCCACAGTCTGTCA +
Preference number: 5 (lower is better)
Translates to: NNVEKVLFLRTLKGGVRKISLER*CSHSLS
Trigger: TGACAGACTGTGGCTACACAATCTCTCAAGTGAGAT...CTTCCTCACTCCTCCCTTCAGTGTCCTGAGGAACAGGACTTTCTCCACATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp AACAATGTGGAGAAAGTCCTGTTCCTCAGGACACTGAAGGGAGGAGTGAGGAAGGGAACATTGAGGGTTTaGACTCTTCGGGCTCTAAAA +
Preference number: 5 (lower is better)
Translates to: NNVEKVLFLRTLKGGVRKGTLRV*TLRALK
Trigger: TTTTAGAGCCCGAAGAGTCAAAACCCTCAATGTTCC...CTTCCTCACTCCTCCCTTCAGTGTCCTGAGGAACAGGACTTTCTCCACATTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp AACAATGTGGAGAAAGTCCTGTTCCTCAGGACACTGAAGGGAGGAGTGAGGAAGTTTGCCAGGTGGAATTaGATTAGCTGCAAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: NNVEKVLFLRTLKGGVRKFARWN*ISCKVF
Trigger: GAACACTTTGCAGCTAATCAAATTCCACCTGGCAAA...CTTCCTCACTCCTCCCTTCAGTGTCCTGAGGAACAGGACTTTCTCCACATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGTTTGCCAGGTGGAATTaGATTAGCTGCAAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMFARWN*ISCKVF
Trigger: GAACACTTTGCAGCTAATCAAATTCCACCTGGCAAA...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp AACAATGTGGAGAAAGTCCTGTTCCTCAGGACACTGAAGGGAGGAGTGAGGAAGACAACTGGCCCACATTaGAAGAATGAGGAACAAGAA +
Preference number: 5 (lower is better)
Translates to: NNVEKVLFLRTLKGGVRKTTGPH*KNEEQE
Trigger: TTCTTGTTCCTCATTCTTCAAATGTGGGCCAGTTGT...CTTCCTCACTCCTCCCTTCAGTGTCCTGAGGAACAGGACTTTCTCCACATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp GGAGGGAACATTGAGGGTTTTGACTCTTCGGGCTCTAAAAGGATTACTCAGGATATCTCACTTGAGAGATaGTGTAGCCACAGTCTGTCA +
Preference number: 5 (lower is better)
Translates to: GGNIEGFDSSGSKRITQDISLER*CSHSLS
Trigger: TGACAGACTGTGGCTACACAATCTCTCAAGTGAGAT...ATCCTGAGTAATCCTTTTAGAGCCCGAAGAGTCAAAACCCTCAATGTTCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp ACAAGGTTAGAGCCCTGGGTCTGGGGCATCCTTAGCCTGAAATTTGTTGACATGGCTTCAGAATCTTCATaGATCTCACTTGAGAGATTG +
Preference number: 5 (lower is better)
Translates to: TRLEPWVWGILSLKFVDMASESS*ISLERL
Trigger: CAATCTCTCAAGTGAGATCAATGAAGATTCTGAAGC...CATGTCAACAAATTTCAGGCTAAGGATGCCCCAGACCCAGGGCTCTAACCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp TCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCCATTGGCTAGAGCAGGAGGGAACATaGAGGGTTTTGACTCTTCGG +
Preference number: 5 (lower is better)
Translates to: SGVPYETKELKEFDCHWLEQEGT*RVLTLR
Trigger: CCGAAGAGTCAAAACCCTCAATGTTCCCTCCTGCTC...TAGCCAATGGCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp TTGCCATTGGCTAAAAATATAGAGGATTTGAGCCACAACTGGCCCACATTTGAAATCTCACTTGAGAGATaGTGTAGCCACAGTCTGTCA +
Preference number: 5 (lower is better)
Translates to: LPLAKNIEDLSHNWPTFEISLER*CSHSLS
Trigger: TGACAGACTGTGGCTACACAATCTCTCAAGTGAGAT...TTCAAATGTGGGCCAGTTGTGGCTCAAATCCTCTATATTTTTAGCCAATGGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS-3UTR CAA 90 bp TCTGGAGTTCCGTATGAAACAAAGGAGCTGAAAGAATTTGATTGCCATTGGCTAGCTTCAGAATCTTCATaGATCTCACTTGAGAGATTG +
Preference number: 5 (lower is better)
Translates to: SGVPYETKELKEFDCHWLASESS*ISLERL
Trigger: CAATCTCTCAAGTGAGATCAATGAAGATTCTGAAGC...TAGCCAATGGCAATCAAATTCTTTCAGCTCCTTTGTTTCATACGGAACTCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS CCA 72 bp AAGGGAGTGCTGCCCGTTCAGGGGTCAGGGTGCCGCTaGCATCAAAGGAGCACTGGATGCGGGCCCGACTGG +
Preference number: 6 (lower is better)
Translates to: KGVLPVQGSGCR*HQRSTGCGPDW
Trigger: CCAGTCGGGCCCGCATCCAGTGCTCCTTTGATGCCAGCGGCACCCTGACCCCTGAACGGGCAGCACTCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS GCA 72 bp GAAAATAAGGGAGTGCTGCCCGTTCAGGGGTCAGGGTaGCGCTGGCATCAAAGGAGCACTGGATGCGGGCCC +
Preference number: 6 (lower is better)
Translates to: ENKGVLPVQGSG*RWHQRSTGCGP
Trigger: GGGCCCGCATCCAGTGCTCCTTTGATGCCAGCGGCACCCTGACCCCTGAACGGGCAGCACTCCCTTATTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS CCA 72 bp CGCTGGCATCAAAGGAGCACTGGATGCGGGCCCGACTaGCAGGACGGGTGTTATAGACGACATAGAGGGTCC +
Preference number: 6 (lower is better)
Translates to: RWHQRSTGCGPD*QDGCYRRHRGS
Trigger: GGACCCTCTATGTCGTCTATAACACCCGTCCTGCCAGTCGGGCCCGCATCCAGTGCTCCTTTGATGCCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS CAA 90 bp TCCCGCTCCTTCTCTGCCACCTCCAGCAGTGGCAGCATCTTGTTCTaGAAGTCCCGCAGCTCAGCAGCATGCCGACTACTCTGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: SRSFSATSSSGSILF*KSRSSAACRLLWSW
Trigger: CCAGGACCAGAGTAGTCGGCATGCTGCTGAGCTGCGGGACTTCAAGAACAAGATGCTGCCACTGCTGGAGGTGGCAGAGAAGGAGCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS TCA 72 bp GGACTCGGGAAGCTTTCCGGGCAGCCATGGCAAGGGTaGAGTCACGCAGCCTTGGGAAGACAAAGGCTGTGT +
Preference number: 6 (lower is better)
Translates to: GLGKLSGQPWQG*SHAALGRQRLC
Trigger: ACACAGCCTTTGTCTTCCCAAGGCTGCGTGACTTCACCCTTGCCATGGCTGCCCGGAAAGCTTCCCGAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS GCA 72 bp AGCATCTTGTTCTTGAAGTCCCGCAGCTCAGCAGCATaGCGACTACTCTGGTCCTGGCACTGGGCCAGCCGT +
Preference number: 6 (lower is better)
Translates to: SILFLKSRSSAA*RLLWSWHWASR
Trigger: ACGGCTGGCCCAGTGCCAGGACCAGAGTAGTCGGCATGCTGCTGAGCTGCGGGACTTCAAGAACAAGATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS GCA 72 bp GCTAGTCGGCGTTCCATGTACTCCACAAGGTGGTGCTaGTGTCCTTGGAGGGGTCCCGACCATGACAAAAGG +
Preference number: 6 (lower is better)
Translates to: ASRRSMYSTRWC*CPWRGPDHDKR
Trigger: CCTTTTGTCATGGTCGGGACCCCTCCAAGGACAGCAGCACCACCTTGTGGAGTACATGGAACGCCGACTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS GCA 72 bp GCAGCTAGTCGGCGTTCCATGTACTCCACAAGGTGGTaGTGCTGTCCTTGGAGGGGTCCCGACCATGACAAA +
Preference number: 6 (lower is better)
Translates to: AASRRSMYSTRW*CCPWRGPDHDK
Trigger: TTTGTCATGGTCGGGACCCCTCCAAGGACAGCAGCACCACCTTGTGGAGTACATGGAACGCCGACTAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS CCA 72 bp AAAGCAGCTAGTCGGCGTTCCATGTACTCCACAAGGTaGTGCTGCTGTCCTTGGAGGGGTCCCGACCATGAC +
Preference number: 6 (lower is better)
Translates to: KAASRRSMYSTR*CCCPWRGPDHD
Trigger: GTCATGGTCGGGACCCCTCCAAGGACAGCAGCACCACCTTGTGGAGTACATGGAACGCCGACTAGCTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS CCA 72 bp CCGGGCAGCCATGGCAAGGGTGAAGTCACGCAGCCTTaGGAAGACAAAGGCTGTGTCATTCTGTGTCCCATC +
Preference number: 6 (lower is better)
Translates to: PGSHGKGEVTQP*EDKGCVILCPI
Trigger: GATGGGACACAGAATGACACAGCCTTTGTCTTCCCAAGGCTGCGTGACTTCACCCTTGCCATGGCTGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS GCA 72 bp CAAAATAAAGAAAGCCACCATATACCAGCTGCCCTGTaGCTACCCAGGGGAAGGGCACCCGGACTCGGGAAG +
Preference number: 6 (lower is better)
Translates to: QNKESHHIPAAL*LPRGRAPGLGK
Trigger: CTTCCCGAGTCCGGGTGCCCTTCCCCTGGGTAGGCACAGGGCAGCTGGTATATGGTGGCTTTCTTTATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS CCA 72 bp ACTTGGCCAGACACAAGTGCCTGTCATCCTCCCGGGTaGCATAGACAGCCCAAAGACCTTCCTCATCAGCTG +
Preference number: 6 (lower is better)
Translates to: TWPDTSACHPPG*HRQPKDLPHQL
Trigger: CAGCTGATGAGGAAGGTCTTTGGGCTGTCTATGCCACCCGGGAGGATGACAGGCACTTGTGTCTGGCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS CAA 72 bp CACTGCTGCTCTGTGTCCAGTGTCTGTGGATCTAACTaGGCCAGACACAAGTGCCTGTCATCCTCCCGGGTG +
Preference number: 6 (lower is better)
Translates to: HCCSVSSVCGSN*ARHKCLSSSRV
Trigger: CACCCGGGAGGATGACAGGCACTTGTGTCTGGCCAAGTTAGATCCACAGACACTGGACACAGAGCAGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS GCA 72 bp GGTGGCATAGACAGCCCAAAGACCTTCCTCATCAGCTaGCAGGTCGATGTAGGTGTCTGCTGTCAAGCCGTA +
Preference number: 6 (lower is better)
Translates to: GGIDSPKTFLIS*QVDVGVCCQAV
Trigger: TACGGCTTGACAGCAGACACCTACATCGACCTGGCAGCTGATGAGGAAGGTCTTTGGGCTGTCTATGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS CCA 72 bp CGTTCCATGTACTCCACAAGGTGGTGCTGCTGTCCTTaGAGGGGTCCCGACCATGACAAAAGGAACAAGATG +
Preference number: 6 (lower is better)
Translates to: RSMYSTRWCCCP*RGPDHDKRNKM
Trigger: CATCTTGTTCCTTTTGTCATGGTCGGGACCCCTCCAAGGACAGCAGCACCACCTTGTGGAGTACATGGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS CCA 72 bp TCTTGGTCCTGCCATTTCCTCAGGCGGGTGTCAGTATaGTCTTCCTCCATCCAAGGCTCTGCTAATCAGCTG +
Preference number: 6 (lower is better)
Translates to: SWSCHFLRRVSV*SSSIQGSANQL
Trigger: CAGCTGATTAGCAGAGCCTTGGATGGAGGAAGACCATACTGACACCCGCCTGAGGAAATGGCAGGACCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633022.1
CDS CCA 72 bp ACACGTAGATCTTCTCTGTTTGCCCCAGTGGATCCTTaGTCCATAGACCAGCTGGGCCACCAAATCGCTTCA +
Preference number: 6 (lower is better)
Translates to: TRRSSLFAPVDP*SIDQLGHQIAS
Trigger: TGAAGCGATTTGGTGGCCCAGCTGGTCTATGGACCAAGGATCCACTGGGGCAAACAGAGAAGATCTACGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS TCA 72 bp TCTGAGCCTCTAGGCAGGTCTAAGCGCATGAAGGTGTaGAGAGGTCTCTGCTCCCTTAGCAATTATCCTCTC +
Preference number: 6 (lower is better)
Translates to: SEPLGRSKRMKV*RGLCSLSNYPL
Trigger: GAGAGGATAATTGCTAAGGGAGCAGAGACCTCTTCACACCTTCATGCGCTTAGACCTGCCTAGAGGCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369551.5
CDS TCA 72 bp TATGGTCTTCCTCCATCCAAGGCTCTGCTAATCAGCTaGGAACTACGCATGTGGGGAGGGATGATGAGCAGA +
Preference number: 6 (lower is better)
Translates to: YGLPPSKALLIS*ELRMWGGMMSR
Trigger: TCTGCTCATCATCCCTCCCCACATGCGTAGTTCTCAGCTGATTAGCAGAGCCTTGGATGGAGGAAGACCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633022.1
CDS TCA 72 bp AGCTGTCCACCACTGTTCGGTTTGCCAGGTGGAATTTaGTTAGCTGCAAAGTGTTCTCCATCTCACCACCTC +
Preference number: 6 (lower is better)
Translates to: SCPPLFGLPGGI*LAAKCSPSHHL
Trigger: GAGGTGGTGAGATGGAGAACACTTTGCAGCTAATCAAATTCCACCTGGCAAACCGAACAGTGGTGGACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS GCA 72 bp ACCACTGTTCGGTTTGCCAGGTGGAATTTGATTAGCTaGAAAGTGTTCTCCATCTCACCACCTCCACCAGGT +
Preference number: 6 (lower is better)
Translates to: TTVRFARWNLIS*KVFSISPPPPG
Trigger: ACCTGGTGGAGGTGGTGAGATGGAGAACACTTTGCAGCTAATCAAATTCCACCTGGCAAACCGAACAGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS CAA 72 bp GACCAGCTGGGCCACCAAATCGCTTCAGAATCTTCATaGATCTCACTTGAGAGATTGTGTAGCCACAGTCTG +
Preference number: 6 (lower is better)
Translates to: DQLGHQIASESS*ISLERLCSHSL
Trigger: CAGACTGTGGCTACACAATCTCTCAAGTGAGATCAATGAAGATTCTGAAGCGATTTGGTGGCCCAGCTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
ENST00000491700.1
CDS CAA 90 bp TGGTCCATAGACCAGCTGGGCCACCAAATCGCTTCAGAATCTTCATaGATCTCACTTGAGAGATTGTGTAGCCACAGTCTGTCACCATAT +
Preference number: 6 (lower is better)
Translates to: WSIDQLGHQIASESS*ISLERLCSHSLSPY
Trigger: ATATGGTGACAGACTGTGGCTACACAATCTCTCAAGTGAGATCAATGAAGATTCTGAAGCGATTTGGTGGCCCAGCTGGTCTATGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS TCA 72 bp ACCAGCTGGGCCACCAAATCGCTTCAGAATCTTCATTaGTCTCACTTGAGAGATTGTGTAGCCACAGTCTGT +
Preference number: 6 (lower is better)
Translates to: TSWATKSLQNLH*SHLRDCVATVC
Trigger: ACAGACTGTGGCTACACAATCTCTCAAGTGAGATCAATGAAGATTCTGAAGCGATTTGGTGGCCCAGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6
CDS GCA 72 bp TCACCTCCATTTCAGCTCCTCTCCATGAGCAAATGCTaGAGTCTTCTTTCCCTGAATGACCTGTCACCATAT +
Preference number: 6 (lower is better)
Translates to: SPPFQLLSMSKC*SLLSLNDLSPY
Trigger: ATATGGTGACAGGTCATTCAGGGAAAGAAGACTGCAGCATTTGCTCATGGAGAGGAGCTGAAATGGAGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633022.1
CDS CAA 90 bp TGGTCCATAGACCAGCTGGGCCACCAAATCGCTTCAGAATCTTCATaGATCTCACTTGAGAGATTGTGTAGCCACAGTCTGATGAGAAAA +
Preference number: 6 (lower is better)
Translates to: WSIDQLGHQIASESS*ISLERLCSHSLMRK
Trigger: TTTTCTCATCAGACTGTGGCTACACAATCTCTCAAGTGAGATCAATGAAGATTCTGAAGCGATTTGGTGGCCCAGCTGGTCTATGGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491700.1
CDS CAA 72 bp ATCGCTTCAGAATCTTCATTGATCTCACTTGAGAGATaGTGTAGCCACAGTCTGTCACCATATCGTACTTCT +
Preference number: 6 (lower is better)
Translates to: IASESSLISLER*CSHSLSPYRTS
Trigger: AGAAGTACGATATGGTGACAGACTGTGGCTACACAATCTCTCAAGTGAGATCAATGAAGATTCTGAAGCGAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320334.5
ENST00000369551.5
ENST00000393300.6