RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFML1 (Homo sapiens)

Ensembl gene IDs: ENSG00000183801

Ensembl transcript IDs: ENST00000329293.4, ENST00000528308.1, ENST00000528758.1, ENST00000530135.5, ENST00000534244.1

Found 290 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCTCCACTCCCAGTGTGCCCGGCTCAATCTTTGTGAGAACCAAATaGCTATGGGTGCCTGGCCCAGAGTGGATGGCCCAGAGCCCATGC +
Preference number: 1 (lower is better)
Translates to: CSTPSVPGSIFVRTK*LWVPGPEWMAQSPC
Trigger: GCATGGGCTCTGGGCCATCCACTCTGGGCCAGGCACCCATAGCCATTTGGTTCTCACAAAGATTGAGCCGGGCACACTGGGAGTGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR CCA 90 bp ACTCCCAGTGTGCCCGGCTCAATCTTTGTGAGAACCAAATGGCTATaGGTGCCTGGCCCAGAGTGGATGGCCCAGAGCCCATGCTCATCC +
Preference number: 1 (lower is better)
Translates to: TPSVPGSIFVRTKWL*VPGPEWMAQSPCSS
Trigger: GGATGAGCATGGGCTCTGGGCCATCCACTCTGGGCCAGGCACCCATAGCCATTTGGTTCTCACAAAGATTGAGCCGGGCACACTGGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR CCA 90 bp GGGGAAGAACAAGTTGGGCAAGTCCTCCTCACTGATAGTGCCCAGTaGATCATAGATGCAGGTGATGCGATGAGGGCCCTGGCCCCCAGT +
Preference number: 1 (lower is better)
Translates to: GEEQVGQVLLTDSAQ*IIDAGDAMRALAPS
Trigger: ACTGGGGGCCAGGGCCCTCATCGCATCACCTGCATCTATGATCCACTGGGCACTATCAGTGAGGAGGACTTGCCCAACTTGTTCTTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR TCA 90 bp TATCCCATGAATGCTCCACTCCCAGTGTGCCCGGCTCAATCTTTGTaGGAACCAAATGGCTATGGGTGCCTGGCCCAGAGTGGATGGCCC +
Preference number: 1 (lower is better)
Translates to: YPMNAPLPVCPAQSL*EPNGYGCLAQSGWP
Trigger: GGGCCATCCACTCTGGGCCAGGCACCCATAGCCATTTGGTTCTCACAAAGATTGAGCCGGGCACACTGGGAGTGGAGCATTCATGGGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR GCA 90 bp AGAGAACCCCACACAAGAGGAATGAGGCTTCAGCATCCTGGCTTCTaGATGGGGTATCCCATGAATGCTCCACTCCCAGTGTGCCCGGCT +
Preference number: 1 (lower is better)
Translates to: REPHTRGMRLQHPGF*MGYPMNAPLPVCPA
Trigger: AGCCGGGCACACTGGGAGTGGAGCATTCATGGGATACCCCATGCAGAAGCCAGGATGCTGAAGCCTCATTCCTCTTGTGTGGGGTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR CCA 90 bp GAGCTGCTTATCTCTGGGGTTGTAATGGATCATGGAGTGACTTCTTaGTCTCTTGGGGAAGAACAAGTTGGGCAAGTCCTCCTCACTGAT +
Preference number: 1 (lower is better)
Translates to: ELLISGVVMDHGVTS*SLGEEQVGQVLLTD
Trigger: ATCAGTGAGGAGGACTTGCCCAACTTGTTCTTCCCCAAGAGACCAAGAAGTCACTCCATGATCCATTACAACCCCAGAGATAAGCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR TCA 90 bp GTGTTAGGATTTGCTTCCGGGGAGCTGGCTTGGTGTTATCCTCCATaGATGCCCGTATGTTTGCAAATTCCCAAACAGTGTTGTTTCTGG +
Preference number: 1 (lower is better)
Translates to: VLGFASGELAWCYPP*MPVCLQIPKQCCFW
Trigger: CCAGAAACAACACTGTTTGGGAATTTGCAAACATACGGGCATTCATGGAGGATAACACCAAGCCAGCTCCCCGGAAGCAAATCCTAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR TCA 90 bp TGTAAAGACTTGTGCATGTTTCACAAAGGTGAAACGAGAATTAAATaGTGTGCAAACACTCCACACCTGGAAAGCGATATTCAAATGTTA +
Preference number: 1 (lower is better)
Translates to: CKDLCMFHKGETRIK*CANTPHLESDIQML
Trigger: TAACATTTGAATATCGCTTTCCAGGTGTGGAGTGTTTGCACATCATTTAATTCTCGTTTCACCTTTGTGAAACATGCACAAGTCTTTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329293.4
3UTR-3UTR CCA 90 bp ACTGATAGTGCCCAGTGGATCATAGATGCAGGTGATGCGATGAGGGCCCTGGCCGTGCCTGGCCCAGAGTaGATGGCCCAGAGCCCATGC +
Preference number: 2 (lower is better)
Translates to: TDSAQWIIDAGDAMRALAVPGPE*MAQSPC
Trigger: GCATGGGCTCTGGGCCATCCACTCTGGGCCAGGCAC...GGCCAGGGCCCTCATCGCATCACCTGCATCTATGATCCACTGGGCACTATCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR-3UTR GCA 90 bp AAATGGCTATGGGTGCCTGGCCCAGAGTGGATGGCCCAGAGCCCATGCTCATCCACTTGGCCTGTTCCCTaGCAGGAAAGTGTTAGGATT +
Preference number: 2 (lower is better)
Translates to: KWLWVPGPEWMAQSPCSSTWPVP*QESVRI
Trigger: AATCCTAACACTTTCCTGGCAGGGAACAGGCCAAGT...GGATGAGCATGGGCTCTGGGCCATCCACTCTGGGCCAGGCACCCATAGCCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR-3UTR TCA 90 bp AGTGCCCAGTGGATCATAGATGCAGGTGATGCGATGAGGGCCCTGGCCCCCAGTAGGGATACTATATTGTaGAGGGGCTATAGCCTCACT +
Preference number: 2 (lower is better)
Translates to: SAQWIIDAGDAMRALAPSRDTIL*RGYSLT
Trigger: AGTGAGGCTATAGCCCCTTCACAATATAGTATCCCT...ACTGGGGGCCAGGGCCCTCATCGCATCACCTGCATCTATGATCCACTGGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR-3UTR TCA 90 bp ACTTGGCCTGTTCCCTGCCAGGAAAGTGTTAGGATTTGCTTCCGGGGAGCTGGCTGGTGTTATCCTCCATaGATGCCCGTATGTTTGCAA +
Preference number: 2 (lower is better)
Translates to: TWPVPCQESVRICFRGAGWCYPP*MPVCLQ
Trigger: TTGCAAACATACGGGCATTCATGGAGGATAACACCA...GCCAGCTCCCCGGAAGCAAATCCTAACACTTTCCTGGCAGGGAACAGGCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR CAA 90 bp GTTCCCTGCCAGGAAAGTGTTAGGATTTGCTTCCGGGGAGCTGGCTaGGTGTTATCCTCCATGAATGCCCGTATGTTTGCAAATTCCCAA +
Preference number: 2 (lower is better)
Translates to: VPCQESVRICFRGAG*VLSSMNARMFANSQ
Trigger: TTGGGAATTTGCAAACATACGGGCATTCATGGAGGATAACACCAAGCCAGCTCCCCGGAAGCAAATCCTAACACTTTCCTGGCAGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR-3UTR GCA 90 bp ATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGTGCTGGTAAACCAATaGTCGGCCTACCCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: ILYCEGAIASLSCRTAAKVLVNQ*SAYPSW
Trigger: CCAGGAGGGGTAGGCCGAGCATTGGTTTACCAGCAC...TTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR-3UTR CCA 90 bp AGAGGACAGCAAGACAAGAGGAGGCTAGAGTTGGGGTCCTCACCCTTAGACTGGGTGAATATTAGGGGCTaGCATACAACTCTAATTGTG +
Preference number: 2 (lower is better)
Translates to: RGQQDKRRLELGSSPLDWVNIRG*HTTLIV
Trigger: CACAATTAGAGTTGTATGCCAGCCCCTAATATTCAC...CCAGTCTAAGGGTGAGGACCCCAACTCTAGCCTCCTCTTGTCTTGCTGTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329293.4
3UTR-3UTR GCA 90 bp CCCCTCCTGGGAGCAGCATTCGATCTTCCACAGTCCTCTTCTGCAGGTTATATTGTTATCCTCCATGAATaGCCGTATGTTTGCAAATTC +
Preference number: 2 (lower is better)
Translates to: PLLGAAFDLPQSSSAGYIVILHE*PYVCKF
Trigger: GAATTTGCAAACATACGGGCATTCATGGAGGATAAC...AATATAACCTGCAGAAGAGGACTGTGGAAGATCGAATGCTGCTCCCAGGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR-3UTR GCA 90 bp ATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGAAAGTGTTAGGATTTaGTTCCGGGGAGCTGGCTTG +
Preference number: 2 (lower is better)
Translates to: ILYCEGAIASLSCRTAAKESVRI*FRGAGL
Trigger: CAAGCCAGCTCCCCGGAAGCAAATCCTAACACTTTC...TTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR-3UTR CCA 90 bp AAGGTGAAACGAGAATTAAATGATGTGCAAACACTCCACACCTGGAAAGCGATAGGCTGTATCAGAATGTaGTCATCCTTGAGAGCCAGG +
Preference number: 2 (lower is better)
Translates to: KVKRELNDVQTLHTWKAIGCIRM*SSLRAR
Trigger: CCTGGCTCTCAAGGATGACCACATTCTGATACAGCC...TATCGCTTTCCAGGTGTGGAGTGTTTGCACATCATTTAATTCTCGTTTCACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329293.4
3UTR-3UTR CCA 90 bp TACGTATTTGATGCTTCCTTGGGCAATGGAAAAACTATGGGATTTGTAGTATTTGAGAGCCAGGAGGTTTaGGGGAGTAATGGACATTGT +
Preference number: 2 (lower is better)
Translates to: YVFDASLGNGKTMGFVVFESQEV*GSNGHC
Trigger: ACAATGTCCATTACTCCCCCAAACCTCCTGGCTCTC...AAATACTACAAATCCCATAGTTTTTCCATTGCCCAAGGAAGCATCAAATACGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329293.4
3UTR-3UTR TCA 90 bp TACGTATTTGATGCTTCCTTGGGCAATGGAAAAACTATGGGATTTGTAGTATTTAGATACCTAAGGCAGTaGCATTTGGGAAAGGAGGCA +
Preference number: 2 (lower is better)
Translates to: YVFDASLGNGKTMGFVVFRYLRQ*HLGKEA
Trigger: TGCCTCCTTTCCCAAATGTCACTGCCTTAGGTATCT...AAATACTACAAATCCCATAGTTTTTCCATTGCCCAAGGAAGCATCAAATACGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329293.4
3UTR CAA 90 bp ATTCCCAAACAGTGTTGTTTCTGGATCCAATTAATAAGTACACCTTaGGAGAGTTATAGACAGCATCTTTCATCCAAGAGCCATGTGTGT +
Preference number: 2 (lower is better)
Translates to: IPKQCCFWIQLISTP*ESYRQHLSSKSHVC
Trigger: ACACACATGGCTCTTGGATGAAAGATGCTGTCTATAACTCTCCAAAGGTGTACTTATTAATTGGATCCAGAAACAACACTGTTTGGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR-3UTR CCA 90 bp GTAGGTGAACAAACATACGTATTTGATGCTTCCTTGGGCAATGGAAAAACTATGAGTTACAGTAAATGCTaGGGAGCAGTAAAACAAAAG +
Preference number: 2 (lower is better)
Translates to: VGEQTYVFDASLGNGKTMSYSKC*GAVKQK
Trigger: CTTTTGTTTTACTGCTCCCCAGCATTTACTGTAACT...CATAGTTTTTCCATTGCCCAAGGAAGCATCAAATACGTATGTTTGTTCACCTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329293.4
3UTR CAA 90 bp TTGACTATAAGAGTAGGTGAACAAACATACGTATTTGATGCTTCCTaGGGCAATGGAAAAACTATGGGATTTGTAGTATTTTCTAGCTGT +
Preference number: 2 (lower is better)
Translates to: LTIRVGEQTYVFDAS*GNGKTMGFVVFSSC
Trigger: ACAGCTAGAAAATACTACAAATCCCATAGTTTTTCCATTGCCCAAGGAAGCATCAAATACGTATGTTTGTTCACCTACTCTTATAGTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329293.4
3UTR CCA 72 bp GTGCCCGGCTCAATCTTTGTGAGAACCAAATGGCTATaGGTGCCTGGCCCAGAGTGGATGGCCCAGAGCCCA +
Preference number: 3 (lower is better)
Translates to: VPGSIFVRTKWL*VPGPEWMAQSP
Trigger: TGGGCTCTGGGCCATCCACTCTGGGCCAGGCACCCATAGCCATTTGGTTCTCACAAAGATTGAGCCGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR TCA 72 bp GGCTTCAGCATCCTGGCTTCTGCATGGGGTATCCCATaGATGCTCCACTCCCAGTGTGCCCGGCTCAATCTT +
Preference number: 3 (lower is better)
Translates to: GFSILASAWGIP*MLHSQCARLNL
Trigger: AAGATTGAGCCGGGCACACTGGGAGTGGAGCATTCATGGGATACCCCATGCAGAAGCCAGGATGCTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR CCA 72 bp GGAGTGCTGGTAAACCAATGCTCGGCCTACCCCTCCTaGGAGCAGCATTCGATCTTCCACAGTCCTCTTCTG +
Preference number: 3 (lower is better)
Translates to: GVLVNQCSAYPS*EQHSIFHSPLL
Trigger: CAGAAGAGGACTGTGGAAGATCGAATGCTGCTCCCAGGAGGGGTAGGCCGAGCATTGGTTTACCAGCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR TCA 72 bp AATGCTCCACTCCCAGTGTGCCCGGCTCAATCTTTGTaGGAACCAAATGGCTATGGGTGCCTGGCCCAGAGT +
Preference number: 3 (lower is better)
Translates to: NAPLPVCPAQSL*EPNGYGCLAQS
Trigger: ACTCTGGGCCAGGCACCCATAGCCATTTGGTTCTCACAAAGATTGAGCCGGGCACACTGGGAGTGGAGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR CCA 72 bp CTCAATCTTTGTGAGAACCAAATGGCTATGGGTGCCTaGCCCAGAGTGGATGGCCCAGAGCCCATGCTCATC +
Preference number: 3 (lower is better)
Translates to: LNLCENQMAMGA*PRVDGPEPMLI
Trigger: GATGAGCATGGGCTCTGGGCCATCCACTCTGGGCCAGGCACCCATAGCCATTTGGTTCTCACAAAGATTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR CCA 72 bp CAAGTTGGGCAAGTCCTCCTCACTGATAGTGCCCAGTaGATCATAGATGCAGGTGATGCGATGAGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: QVGQVLLTDSAQ*IIDAGDAMRAL
Trigger: CAGGGCCCTCATCGCATCACCTGCATCTATGATCCACTGGGCACTATCAGTGAGGAGGACTTGCCCAACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR GCA 72 bp ACTTGGCCTGTTCCCTGCCAGGAAAGTGTTAGGATTTaGTTCCGGGGAGCTGGCTTGGTGTTATCCTCCATG +
Preference number: 3 (lower is better)
Translates to: TWPVPCQESVRI*FRGAGLVLSSM
Trigger: CATGGAGGATAACACCAAGCCAGCTCCCCGGAAGCAAATCCTAACACTTTCCTGGCAGGGAACAGGCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR CCA 72 bp AGAACCCCACACAAGAGGAATGAGGCTTCAGCATCCTaGCTTCTGCATGGGGTATCCCATGAATGCTCCACT +
Preference number: 3 (lower is better)
Translates to: RTPHKRNEASAS*LLHGVSHECST
Trigger: AGTGGAGCATTCATGGGATACCCCATGCAGAAGCCAGGATGCTGAAGCCTCATTCCTCTTGTGTGGGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR-3UTR CAA 90 bp AATCTTTGTGAGAACCAAATGGCTATGGGTGCCTGGCCCAGAGTGGATGGCCCACCAGGTCAATGTAAGTaGAGGGGGAGTGCTGGTAAA +
Preference number: 3 (lower is better)
Translates to: NLCENQMAMGAWPRVDGPPGQCK*RGSAGK
Trigger: TTTACCAGCACTCCCCCTCAACTTACATTGACCTGG...TGGGCCATCCACTCTGGGCCAGGCACCCATAGCCATTTGGTTCTCACAAAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR-3UTR CAA 90 bp GCTAGAGTTGGGGTCCTCACCCTTAGACTGGTTTTCTGGAGGAATTATCATTTGAGAATGTGGTCATCCTaGAGAGCCAGGAGGTTTGGG +
Preference number: 3 (lower is better)
Translates to: ARVGVLTLRLVFWRNYHLRMWSS*RARRFG
Trigger: CCCAAACCTCCTGGCTCTCAAGGATGACCACATTCT...CAAATGATAATTCCTCCAGAAAACCAGTCTAAGGGTGAGGACCCCAACTCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329293.4
3UTR TCA 72 bp TTTGCTTCCGGGGAGCTGGCTTGGTGTTATCCTCCATaGATGCCCGTATGTTTGCAAATTCCCAAACAGTGT +
Preference number: 3 (lower is better)
Translates to: FASGELAWCYPP*MPVCLQIPKQC
Trigger: ACACTGTTTGGGAATTTGCAAACATACGGGCATTCATGGAGGATAACACCAAGCCAGCTCCCCGGAAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR GCA 72 bp CTTCCGGGGAGCTGGCTTGGTGTTATCCTCCATGAATaGCCGTATGTTTGCAAATTCCCAAACAGTGTTGTT +
Preference number: 3 (lower is better)
Translates to: LPGSWLGVILHE*PYVCKFPNSVV
Trigger: AACAACACTGTTTGGGAATTTGCAAACATACGGGCATTCATGGAGGATAACACCAAGCCAGCTCCCCGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR CCA 72 bp ATCTCTGGGGTTGTAATGGATCATGGAGTGACTTCTTaGTCTCTTGGGGAAGAACAAGTTGGGCAAGTCCTC +
Preference number: 3 (lower is better)
Translates to: ISGVVMDHGVTS*SLGEEQVGQVL
Trigger: GAGGACTTGCCCAACTTGTTCTTCCCCAAGAGACCAAGAAGTCACTCCATGATCCATTACAACCCCAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR-3UTR CAA 90 bp GAGAAACAGAGGACAGCAAGACAAGAGGAGGCTAGAGTTGGGGTCCTCACCCTTAACAAACATACGTATTaGATGCTTCCTTGGGCAATG +
Preference number: 3 (lower is better)
Translates to: EKQRTARQEEARVGVLTLNKHTY*MLPWAM
Trigger: CATTGCCCAAGGAAGCATCAAATACGTATGTTTGTT...AAGGGTGAGGACCCCAACTCTAGCCTCCTCTTGTCTTGCTGTCCTCTGTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329293.4
3UTR CCA 72 bp GGTTTCCTTCATTCCAGGCATAGAGCTGCTTATCTCTaGGGTTGTAATGGATCATGGAGTGACTTCTTGGTC +
Preference number: 3 (lower is better)
Translates to: GFLHSRHRAAYL*GCNGSWSDFLV
Trigger: GACCAAGAAGTCACTCCATGATCCATTACAACCCCAGAGATAAGCAGCTCTATGCCTGGAATGAAGGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR GCA 72 bp TGGCTTGGTGTTATCCTCCATGAATGCCCGTATGTTTaGAAATTCCCAAACAGTGTTGTTTCTGGATCCAAT +
Preference number: 3 (lower is better)
Translates to: WLGVILHECPYV*KFPNSVVSGSN
Trigger: ATTGGATCCAGAAACAACACTGTTTGGGAATTTGCAAACATACGGGCATTCATGGAGGATAACACCAAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR CCA 72 bp CCCGTATGTTTGCAAATTCCCAAACAGTGTTGTTTCTaGATCCAATTAATAAGTACACCTTTGGAGAGTTAT +
Preference number: 3 (lower is better)
Translates to: PVCLQIPKQCCF*IQLISTPLESY
Trigger: ATAACTCTCCAAAGGTGTACTTATTAATTGGATCCAGAAACAACACTGTTTGGGAATTTGCAAACATACGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR GCA 90 bp AAATGGCTATGGGTGCCTGGCCCAGAGTGGATGGCCCAGAGCCCATGCTCATCCGGGTCCTGGGTACACTaGGGCGGGGGCAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: KWLWVPGPEWMAQSPCSSGSWVH*GGGRKA
Trigger: AGCTTTTCTGCCCCCGCCGCAGTGTACCCAGGACCC...GGATGAGCATGGGCTCTGGGCCATCCACTCTGGGCCAGGCACCCATAGCCATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR CCA 90 bp GGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTGTGCCTGGCCCAGAGTaGATGGCCCAGAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: GAIASLSCRTAAKATVLFVPGPE*MAQSPC
Trigger: GCATGGGCTCTGGGCCATCCACTCTGGGCCAGGCAC...AAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR TCA 90 bp GGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTTGTTGCCCTCACCCTTaGCACATGCGGACCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GAIASLSCRTAAKATVLFCCPHP*HMRTLP
Trigger: GGGGAGGGTCCGCATGTGTCAAGGGTGAGGGCAACA...AAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CCA 90 bp GCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCACAGCTTGGCAGAGAGCTCCCTaGGTCCAGCATCTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: ASLSCRTAAKATVLFLTAWQRAP*VQHLLP
Trigger: GGGCAACAGATGCTGGACCCAGGGAGCTCTCTGCCA...AGCTGTGAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CCA 90 bp GAAGGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCGTAATGCACCATGGCTaGGTCCTGGGTACACTGCGG +
Preference number: 4 (lower is better)
Translates to: EGAIASLSCRTAAKATVLVMHHG*VLGTLR
Trigger: CCGCAGTGTACCCAGGACCCAGCCATGGTGCATTAC...GAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp GGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTGGCCCAGAGTGGATaGCCCAGAGCCCATGCTCAT +
Preference number: 4 (lower is better)
Translates to: GAIASLSCRTAAKATVLFLAQSG*PRAHAH
Trigger: ATGAGCATGGGCTCTGGGCCATCCACTCTGGGCCAG...AAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp GCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCACAGCTTCTCAAGGGCTCCGGTaGTGCTCTCCTGCTCTATCC +
Preference number: 4 (lower is better)
Translates to: ASLSCRTAAKATVLFLTASQGLR*CSPALS
Trigger: GGATAGAGCAGGAGAGCACCACCGGAGCCCTTGAGA...AGCTGTGAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000528758.1
CDS-3UTR CCA 90 bp CCACACAAGAGGAATGAGGCTTCAGCATCCTGGCTTCTGCATGGGGTATCCCATTCTCAAGGGCTCCGGTaGTGCTCTCCTGCTCTATCC +
Preference number: 4 (lower is better)
Translates to: PHKRNEASASWLLHGVSHSQGLR*CSPALS
Trigger: GGATAGAGCAGGAGAGCACCACCGGAGCCCTTGAGA...ATGGGATACCCCATGCAGAAGCCAGGATGCTGAAGCCTCATTCCTCTTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR CCA 90 bp TGTGAAGGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGGTAATGCACCATGGCTaGGTCCTGGGTACACTGCGG +
Preference number: 4 (lower is better)
Translates to: CEGAIASLSCRTAAKATVVMHHG*VLGTLR
Trigger: CCGCAGTGTACCCAGGACCCAGCCATGGTGCATTAC...CACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCCTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp TGCTCCACTCCCAGTGTGCCCGGCTCAATCTTTGTGAGAACCAAATGGCTATGGTCGGCCTACCCCTCCTaGGAGCAGCATTCGATCTTC +
Preference number: 4 (lower is better)
Translates to: CSTPSVPGSIFVRTKWLWSAYPS*EQHSIF
Trigger: GAAGATCGAATGCTGCTCCCAGGAGGGGTAGGCCGA...CCATAGCCATTTGGTTCTCACAAAGATTGAGCCGGGCACACTGGGAGTGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR CCA 90 bp GCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCCTGGCCCAGAGTGGATaGCCCAGAGCCCATGCTCAT +
Preference number: 4 (lower is better)
Translates to: AIASLSCRTAAKATVLFLLAQSG*PRAHAH
Trigger: ATGAGCATGGGCTCTGGGCCATCCACTCTGGGCCAG...GAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR TCA 90 bp GGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTGCATGGGGTATCCCATaGATGCTCCACTCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: GAIASLSCRTAAKATVLFAWGIP*MLHSQC
Trigger: ACACTGGGAGTGGAGCATTCATGGGATACCCCATGC...AAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR TCA 90 bp GAGAAACAGAGGACAGCAAGACAAGAGGAGGCTAGAGTTGGGGTCCTCACCCTTCCCACACAAGAGGAATaGGGCTTCAGCATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: EKQRTARQEEARVGVLTLPTQEE*GFSILA
Trigger: AGCCAGGATGCTGAAGCCTCATTCCTCTTGTGTGGG...AAGGGTGAGGACCCCAACTCTAGCCTCCTCTTGTCTTGCTGTCCTCTGTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR TCA 90 bp CCCCTCCTGGGAGCAGCATTCGATCTTCCACAGTCCTCTTCTGCAGGTTATATTGATCATAGATGCAGGTaGTGCGATGAGGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PLLGAAFDLPQSSSAGYIDHRCR*CDEGPG
Trigger: GCCAGGGCCCTCATCGCATCACCTGCATCTATGATC...AATATAACCTGCAGAAGAGGACTGTGGAAGATCGAATGCTGCTCCCAGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR CCA 90 bp TGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGTGATTACCATGGCTGGGTCCTaGGTACACTGCGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: WERRHTYFHFYTLFLCVITMAGS*VHCGGG
Trigger: GCCCCCGCCGCAGTGTACCCAGGACCCAGCCATGGT...AATCACACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp TGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTACCATGGCTGGGTCCTaGGTACACTGCGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: CVIRGILYCEGAIASLSCTMAGS*VHCGGG
Trigger: GCCCCCGCCGCAGTGTACCCAGGACCCAGCCATGGT...ACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp GCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCTCGGCCTACCCCTCCTaGGAGCAGCATTCGATCTTC +
Preference number: 4 (lower is better)
Translates to: AIASLSCRTAAKATVLFLSAYPS*EQHSIF
Trigger: GAAGATCGAATGCTGCTCCCAGGAGGGGTAGGCCGA...GAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp GCTAGAGTTGGGGTCCTCACCCTTAGACTGGTTTTCTGGAGGAATTATCATTTGGTGCCTGGCCCAGAGTaGATGGCCCAGAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: ARVGVLTLRLVFWRNYHLVPGPE*MAQSPC
Trigger: GCATGGGCTCTGGGCCATCCACTCTGGGCCAGGCAC...CAAATGATAATTCCTCCAGAAAACCAGTCTAAGGGTGAGGACCCCAACTCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR CCA 90 bp GCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCACAGCTGAGGCTTCAGCATCCTaGCTTCTGCATGGGGTATCC +
Preference number: 4 (lower is better)
Translates to: ASLSCRTAAKATVLFLTAEASAS*LLHGVS
Trigger: GGATACCCCATGCAGAAGCCAGGATGCTGAAGCCTC...AGCTGTGAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp ATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCACAGCCACCATCATCCTGTaGCAGAGAGCTCCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: IASLSCRTAAKATVLFLTATIIL*QRAPWV
Trigger: GACCCAGGGAGCTCTCTGCCACAGGATGATGGTGGC...TGTGAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530135.5
CDS-3UTR TCA 90 bp GCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCCCCACACAAGAGGAATaGGGCTTCAGCATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: AIASLSCRTAAKATVLFLPTQEE*GFSILA
Trigger: AGCCAGGATGCTGAAGCCTCATTCCTCTTGTGTGGG...GAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR GCA 90 bp ACTTGGCCTGTTCCCTGCCAGGAAAGTGTTAGGATTTGCTTCCGGGGAGCTGGCTACGTGAGCTCAGTTTaGCAGCTAGTGATCAAGTCC +
Preference number: 4 (lower is better)
Translates to: TWPVPCQESVRICFRGAGYVSSV*QLVIKS
Trigger: GGACTTGATCACTAGCTGGCAAACTGAGCTCACGTA...GCCAGCTCCCCGGAAGCAAATCCTAACACTTTCCTGGCAGGGAACAGGCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR GCA 90 bp ATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCACAGGGGTATCCCATGAATaGTCCACTCCCAGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: IASLSCRTAAKATVLFLTGVSHE*STPSVP
Trigger: GGGCACACTGGGAGTGGAGCATTCATGGGATACCCC...TGTGAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp GGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTTTGCTTCCGGGGAGCTaGCTTGGTGTTATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: GAIASLSCRTAAKATVLFLLPGS*LGVILH
Trigger: ATGGAGGATAACACCAAGCCAGCTCCCCGGAAGCAA...AAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR TCA 90 bp GCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCCAGTGTCTTGTCCTCTaGTTCGATGCACTCGTCAGC +
Preference number: 4 (lower is better)
Translates to: AIASLSCRTAAKATVLFLQCLVL*FDALVS
Trigger: GCTGACGAGTGCATCGAATCAGAGGACAAGACACTG...GAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR TCA 90 bp ATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCACAGCATGGGGTATCCCATaGATGCTCCACTCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: IASLSCRTAAKATVLFLTAWGIP*MLHSQC
Trigger: ACACTGGGAGTGGAGCATTCATGGGATACCCCATGC...TGTGAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR GCA 90 bp CTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCCAAGGGCTCCGGTGGTaGTCTCCTGCTCTATCCGCT +
Preference number: 4 (lower is better)
Translates to: LCVIRGILYCEGAIASLSQGLRW*SPALSA
Trigger: AGCGGATAGAGCAGGAGAGCACCACCGGAGCCCTTG...GGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000528758.1
CDS-3UTR GCA 90 bp GTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTAGAGGGTCCTGGGTACACTaGGGCGGGGGCAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: VIRGILYCEGAIASLSCRGSWVH*GGGRKA
Trigger: AGCTTTTCTGCCCCCGCCGCAGTGTACCCAGGACCC...TCTACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR GCA 90 bp TGCTCCACTCCCAGTGTGCCCGGCTCAATCTTTGTGAGAACCAAATGGCTATGGGAAAGTGTTAGGATTTaGTTCCGGGGAGCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: CSTPSVPGSIFVRTKWLWESVRI*FRGAGL
Trigger: CAAGCCAGCTCCCCGGAAGCAAATCCTAACACTTTC...CCATAGCCATTTGGTTCTCACAAAGATTGAGCCGGGCACACTGGGAGTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR GCA 90 bp AATCTTTGTGAGAACCAAATGGCTATGGGTGCCTGGCCCAGAGTGGATGGCCCACAGCATCCTGGCTTCTaGATGGGGTATCCCATGAAT +
Preference number: 4 (lower is better)
Translates to: NLCENQMAMGAWPRVDGPQHPGF*MGYPMN
Trigger: ATTCATGGGATACCCCATGCAGAAGCCAGGATGCTG...TGGGCCATCCACTCTGGGCCAGGCACCCATAGCCATTTGGTTCTCACAAAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR CCA 90 bp CTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCATGGCTATGGGTGCCTaGCCCAGAGTGGATGGCCCA +
Preference number: 4 (lower is better)
Translates to: LCVIRGILYCEGAIASLSMAMGA*PRVDGP
Trigger: TGGGCCATCCACTCTGGGCCAGGCACCCATAGCCAT...GGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR TCA 90 bp CTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCGATCATAGATGCAGGTaGTGCGATGAGGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LCVIRGILYCEGAIASLSDHRCR*CDEGPG
Trigger: GCCAGGGCCCTCATCGCATCACCTGCATCTATGATC...GGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR TCA 90 bp ATGTGGTCATCCTTGAGAGCCAGGAGGTTTGGGGGAGTAATGGACATTGTTGAAGAATGTGGTCATCCTTaGGAGCCAGGAGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: MWSSLRARRFGGVMDIVEECGHP*EPGGLG
Trigger: CCCCAAACCTCCTGGCTCTCAAGGATGACCACATTC...TTCAACAATGTCCATTACTCCCCCAAACCTCCTGGCTCTCAAGGATGACCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR GCA 90 bp TGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGTGATTCAAGGGCTCCGGTGGTaGTCTCCTGCTCTATCCGCT +
Preference number: 4 (lower is better)
Translates to: WERRHTYFHFYTLFLCVIQGLRW*SPALSA
Trigger: AGCGGATAGAGCAGGAGAGCACCACCGGAGCCCTTG...AATCACACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000528758.1
CDS-3UTR GCA 90 bp GAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGTGATTAGAGGGTCCTGGGTACACTaGGGCGGGGGCAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: ERRHTYFHFYTLFLCVIRGSWVH*GGGRKA
Trigger: AGCTTTTCTGCCCCCGCCGCAGTGTACCCAGGACCC...TCTAATCACACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR GCA 90 bp GCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCGAAAGTGTTAGGATTTaGTTCCGGGGAGCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: AIASLSCRTAAKATVLFLESVRI*FRGAGL
Trigger: CAAGCCAGCTCCCCGGAAGCAAATCCTAACACTTTC...GAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR GCA 90 bp GCAGTGACATTTGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCGTGCTGGTAAACCAATaGTCGGCCTACCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: AVTFGKGGIRISTSTHSSVLVNQ*SAYPSW
Trigger: CCAGGAGGGGTAGGCCGAGCATTGGTTTACCAGCAC...GGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCAAATGTCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR GCA 90 bp GCAGTGACATTTGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCGGGGTATCCCATGAATaGTCCACTCCCAGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: AVTFGKGGIRISTSTHSSGVSHE*STPSVP
Trigger: GGGCACACTGGGAGTGGAGCATTCATGGGATACCCC...GGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCAAATGTCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp ATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAATGGCAGAGAGCTCCCTaGGTCCAGCATCTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: ILYCEGAIASLSCRTAAKWQRAP*VQHLLP
Trigger: GGGCAACAGATGCTGGACCCAGGGAGCTCTCTGCCA...TTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CCA 90 bp ATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCACACAGCTGTTGGCAAGTTaGTCCCTGAGGCCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: IASLSCRTAAKATVLFLTQLLAS*SLRPCR
Trigger: TCTACAAGGCCTCAGGGACCAACTTGCCAACAGCTG...TGTGAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000528758.1
CDS-3UTR CCA 90 bp GTAGGTGAACAAACATACGTATTTGATGCTTCCTTGGGCAATGGAAAAACTATGACCATGGCTGGGTCCTaGGTACACTGCGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: VGEQTYVFDASLGNGKTMTMAGS*VHCGGG
Trigger: GCCCCCGCCGCAGTGTACCCAGGACCCAGCCATGGT...CATAGTTTTTCCATTGCCCAAGGAAGCATCAAATACGTATGTTTGTTCACCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR CCA 90 bp CTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCGTAATGCACCATGGCTaGGTCCTGGGTACACTGCGG +
Preference number: 4 (lower is better)
Translates to: LCVIRGILYCEGAIASLSVMHHG*VLGTLR
Trigger: CCGCAGTGTACCCAGGACCCAGCCATGGTGCATTAC...GGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp TGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTATGGCTATGGGTGCCTaGCCCAGAGTGGATGGCCCA +
Preference number: 4 (lower is better)
Translates to: CVIRGILYCEGAIASLSCMAMGA*PRVDGP
Trigger: TGGGCCATCCACTCTGGGCCAGGCACCCATAGCCAT...ACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp TGTGAAGGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGGACTTCTTGGTCTCTTaGGGAAGAACAAGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: CEGAIASLSCRTAAKATVDFLVS*GRTSWA
Trigger: TGCCCAACTTGTTCTTCCCCAAGAGACCAAGAAGTC...CACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCCTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp GAAGGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCCATGTTGTCACAGCTTaGGTACATTTTTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: EGAIASLSCRTAAKATVLHVVTA*VHFSSP
Trigger: AGGGCTGGAAAAATGTACCCAAGCTGTGACAACATG...GAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR CAA 72 bp AGAAACAGAGGACAGCAAGACAAGAGGAGGCTAGAGTaGGGGTCCTCACCCTTAGACTGGTTTTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RNRGQQDKRRLE*GSSPLDWFSGG
Trigger: TCCTCCAGAAAACCAGTCTAAGGGTGAGGACCCCAACTCTAGCCTCCTCTTGTCTTGCTGTCCTCTGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR TCA 90 bp TACACACTCTTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATATGTTGCCCTCACCCTTaGCACATGCGGACCCTCCCC +
Preference number: 4 (lower is better)
Translates to: YTLFLCVIRGILYCEGAICCPHP*HMRTLP
Trigger: GGGGAGGGTCCGCATGTGTCAAGGGTGAGGGCAACA...TATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAAGAGTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR TCA 90 bp AATCTTTGTGAGAACCAAATGGCTATGGGTGCCTGGCCCAGAGTGGATGGCCCATGGTGTTATCCTCCATaGATGCCCGTATGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: NLCENQMAMGAWPRVDGPWCYPP*MPVCLQ
Trigger: TTGCAAACATACGGGCATTCATGGAGGATAACACCA...TGGGCCATCCACTCTGGGCCAGGCACCCATAGCCATTTGGTTCTCACAAAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR TCA 90 bp TGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTGATCATAGATGCAGGTaGTGCGATGAGGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: CVIRGILYCEGAIASLSCDHRCR*CDEGPG
Trigger: GCCAGGGCCCTCATCGCATCACCTGCATCTATGATC...ACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR TCA 90 bp ACTTGGCCTGTTCCCTGCCAGGAAAGTGTTAGGATTTGCTTCCGGGGAGCTGGCTCTGGAGTTTGTAAATaGTCTGGTTTCCTTCATTCC +
Preference number: 4 (lower is better)
Translates to: TWPVPCQESVRICFRGAGSGVCK*SGFLHS
Trigger: GGAATGAAGGAAACCAGATCATTTACAAACTCCAGA...GCCAGCTCCCCGGAAGCAAATCCTAACACTTTCCTGGCAGGGAACAGGCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR TCA 90 bp GGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTAGGGATACTATATTGTaGAGGGGCTATAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: GAIASLSCRTAAKATVLFRDTIL*RGYSLT
Trigger: AGTGAGGCTATAGCCCCTTCACAATATAGTATCCCT...AAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR GCA 90 bp TTATCCTCCATGAATGCCCGTATGTTTGCAAATTCCCAAACAGTGTTGTTTCTGCCGGTGGTGCTCTCCTaGTCTATCCGCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LSSMNARMFANSQTVLFLPVVLS*SIRCCG
Trigger: GCCACAGCAGCGGATAGAGCAGGAGAGCACCACCGG...CAGAAACAACACTGTTTGGGAATTTGCAAACATACGGGCATTCATGGAGGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR GCA 90 bp TGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTGTGCTGGTAAACCAATaGTCGGCCTACCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: CVIRGILYCEGAIASLSCVLVNQ*SAYPSW
Trigger: CCAGGAGGGGTAGGCCGAGCATTGGTTTACCAGCAC...ACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR GCA 90 bp AGAGAAAAGCCAGTGGTGAATATTAGGGGCTGGCATACAACTCTAATTGTGGGACCAAATGGCTATGGGTaGCTGGCCCAGAGTGGATGG +
Preference number: 4 (lower is better)
Translates to: REKPVVNIRGWHTTLIVGPNGYG*LAQSGW
Trigger: CCATCCACTCTGGGCCAGGCACCCATAGCCATTTGG...TCCCACAATTAGAGTTGTATGCCAGCCCCTAATATTCACCACTGGCTTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR GCA 90 bp ACACTCTTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCCCAAATGGCTATGGGTaGCTGGCCCAGAGTGGATGG +
Preference number: 4 (lower is better)
Translates to: TLFLCVIRGILYCEGAIAPNGYG*LAQSGW
Trigger: CCATCCACTCTGGGCCAGGCACCCATAGCCATTTGG...GGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAAGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp GACATTTGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTTCGGCCTACCCCTCCTaGGAGCAGCATTCGATCTTC +
Preference number: 4 (lower is better)
Translates to: DIWERRHTYFHFYTLFLCSAYPS*EQHSIF
Trigger: GAAGATCGAATGCTGCTCCCAGGAGGGGTAGGCCGA...ACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCAAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp GCCCGTATGTTTGCAAATTCCCAAACAGTGTTGTTTCTGGATCCAATTAATAAGGTGCCTGGCCCAGAGTaGATGGCCCAGAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: ARMFANSQTVLFLDPINKVPGPE*MAQSPC
Trigger: GCATGGGCTCTGGGCCATCCACTCTGGGCCAGGCAC...CTTATTAATTGGATCCAGAAACAACACTGTTTGGGAATTTGCAAACATACGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR CCA 90 bp GAGAAACAGAGGACAGCAAGACAAGAGGAGGCTAGAGTTGGGGTCCTCACCCTTCATGGAGTGACTTCTTaGTCTCTTGGGGAAGAACAA +
Preference number: 4 (lower is better)
Translates to: EKQRTARQEEARVGVLTLHGVTS*SLGEEQ
Trigger: TTGTTCTTCCCCAAGAGACCAAGAAGTCACTCCATG...AAGGGTGAGGACCCCAACTCTAGCCTCCTCTTGTCTTGCTGTCCTCTGTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR CCA 90 bp CAGCCAGGTCAATGTAAGTTGAGGGGGAGTGCTGGTAAACCAATGCTCGGCCTAAGAGCTGCTTATCTCTaGGGTTGTAATGGATCATGG +
Preference number: 4 (lower is better)
Translates to: QPGQCKLRGSAGKPMLGLRAAYL*GCNGSW
Trigger: CCATGATCCATTACAACCCCAGAGATAAGCAGCTCT...TAGGCCGAGCATTGGTTTACCAGCACTCCCCCTCAACTTACATTGACCTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR CAA 72 bp CAGGAAAGTGTTAGGATTTGCTTCCGGGGAGCTGGCTaGGTGTTATCCTCCATGAATGCCCGTATGTTTGCA +
Preference number: 4 (lower is better)
Translates to: QESVRICFRGAG*VLSSMNARMFA
Trigger: TGCAAACATACGGGCATTCATGGAGGATAACACCAAGCCAGCTCCCCGGAAGCAAATCCTAACACTTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR TCA 90 bp ATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCATGGGGTATCCCATaGATGCTCCACTCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: ILYCEGAIASLSCRTAAKAWGIP*MLHSQC
Trigger: ACACTGGGAGTGGAGCATTCATGGGATACCCCATGC...TTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR TCA 90 bp GACATTTGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTCCCACACAAGAGGAATaGGGCTTCAGCATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: DIWERRHTYFHFYTLFLCPTQEE*GFSILA
Trigger: AGCCAGGATGCTGAAGCCTCATTCCTCTTGTGTGGG...ACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCAAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR TCA 90 bp GCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCAGGGATACTATATTGTaGAGGGGCTATAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: AIASLSCRTAAKATVLFLRDTIL*RGYSLT
Trigger: AGTGAGGCTATAGCCCCTTCACAATATAGTATCCCT...GAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR GCA 90 bp TGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGTGATTCCCCAGGCTAGTGGTTaGAAGCTGCTTCCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: WERRHTYFHFYTLFLCVIPQASG*KLLPGL
Trigger: TAAGCCAGGAAGCAGCTTGCAACCACTAGCCTGGGG...AATCACACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR GCA 90 bp ACACTCTTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCCCCCAGGCTAGTGGTTaGAAGCTGCTTCCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: TLFLCVIRGILYCEGAIAPQASG*KLLPGL
Trigger: TAAGCCAGGAAGCAGCTTGCAACCACTAGCCTGGGG...GGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAAGAGTGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR GCA 90 bp CTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCGAACAGAACCAGCAATaGAGAAGCTCCTCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LCVIRGILYCEGAIASLSEQNQQ*RSSSKG
Trigger: GCCCTTCGAGGAGCTTCTGCATTGCTGGTTCTGTTC...GGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR GCA 90 bp GAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGTGATTAGAGGGGTATCCCATGAATaGTCCACTCCCAGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: ERRHTYFHFYTLFLCVIRGVSHE*STPSVP
Trigger: GGGCACACTGGGAGTGGAGCATTCATGGGATACCCC...TCTAATCACACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp GGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTTTGCAAGCTGCTTCCTaGCTTAATTGTGTGTGCATT +
Preference number: 4 (lower is better)
Translates to: GAIASLSCRTAAKATVLFLQAAS*LNCVCI
Trigger: AATGCACACACAATTAAGCCAGGAAGCAGCTTGCAA...AAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CCA 90 bp ATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCACATATGCCCTCGTTGCTTaGGTACATTTTTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: IASLSCRTAAKATVLFLTYALVA*VHFSSP
Trigger: AGGGCTGGAAAAATGTACCCAAGCAACGAGGGCATA...TGTGAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CCA 90 bp TACACACTCTTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAATGGCTATGGGTGCCTaGCCCAGAGTGGATGGCCCA +
Preference number: 4 (lower is better)
Translates to: YTLFLCVIRGILYCEGAIMAMGA*PRVDGP
Trigger: TGGGCCATCCACTCTGGGCCAGGCACCCATAGCCAT...TATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAAGAGTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp GACATTTGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTAGAACCAAATGGCTATaGGTGCCTGGCCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: DIWERRHTYFHFYTLFLCRTKWL*VPGPEW
Trigger: CCACTCTGGGCCAGGCACCCATAGCCATTTGGTTCT...ACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCAAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp TGTGAAGGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGGGTTGTAATGGATCATaGAGTGACTTCTTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: CEGAIASLSCRTAAKATVGCNGS*SDFLVS
Trigger: AGAGACCAAGAAGTCACTCCATGATCCATTACAACC...CACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCCTTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp CTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCGGATCTCTTGAGCTCTaGAGTTTGAGACCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LCVIRGILYCEGAIASLSGSLEL*SLRPAW
Trigger: CCAGGCTGGTCTCAAACTCCAGAGCTCAAGAGATCC...GGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR TCA 90 bp GCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCACAGCTTCTGGAGTTTGTAAATaGTCTGGTTTCCTTCATTCC +
Preference number: 4 (lower is better)
Translates to: ASLSCRTAAKATVLFLTASGVCK*SGFLHS
Trigger: GGAATGAAGGAAACCAGATCATTTACAAACTCCAGA...AGCTGTGAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR GCA 90 bp ATGTGGTCATCCTTGAGAGCCAGGAGGTTTGGGGGAGTAATGGACATTGTTGAATCCTGCTCTATCCGCTaGTGTGGCAAATCCTCTAAA +
Preference number: 4 (lower is better)
Translates to: MWSSLRARRFGGVMDIVESCSIR*CGKSSK
Trigger: TTTAGAGGATTTGCCACAGCAGCGGATAGAGCAGGA...TTCAACAATGTCCATTACTCCCCCAAACCTCCTGGCTCTCAAGGATGACCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR GCA 90 bp GACATTTGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGAACAGAACCAGCAATaGAGAAGCTCCTCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: DIWERRHTYFHFYTLFLCEQNQQ*RSSSKG
Trigger: GCCCTTCGAGGAGCTTCTGCATTGCTGGTTCTGTTC...ACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCAAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR GCA 90 bp GCAGTGACATTTGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTCCTCTGATTCGATaGACTCGTCAGCCTCTCGAA +
Preference number: 4 (lower is better)
Translates to: AVTFGKGGIRISTSTHSSCPLIR*TRQPLE
Trigger: TTCGAGAGGCTGACGAGTGCATCGAATCAGAGGACA...GGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCAAATGTCACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR GCA 90 bp TGCTTCCGGGGAGCTGGCTTGGTGTTATCCTCCATGAATGCCCGTATGTTTGCAGTTATCCTCCATGAATaGCCGTATGTTTGCAAATTC +
Preference number: 4 (lower is better)
Translates to: CFRGAGLVLSSMNARMFAVILHE*PYVCKF
Trigger: GAATTTGCAAACATACGGGCATTCATGGAGGATAAC...TGCAAACATACGGGCATTCATGGAGGATAACACCAAGCCAGCTCCCCGGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR GCA 90 bp ATAGACAGCATCTTTCATCCAAGAGCCATGTGTGTCCATCATCTTCTTCACTATGTGCTGGTAAACCAATaGTCGGCCTACCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: IDSIFHPRAMCVHHLLHYVLVNQ*SAYPSW
Trigger: CCAGGAGGGGTAGGCCGAGCATTGGTTTACCAGCAC...ATAGTGAAGAAGATGATGGACACACATGGCTCTTGGATGAAAGATGCTGTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR GCA 90 bp AAAATAGAAAACCTTTGTAGATCACTTGGCCTGTTCCCTGCCAGGAAAGTGTTACCAAATGGCTATGGGTaGCTGGCCCAGAGTGGATGG +
Preference number: 4 (lower is better)
Translates to: KIENLCRSLGLFPARKVLPNGYG*LAQSGW
Trigger: CCATCCACTCTGGGCCAGGCACCCATAGCCATTTGG...TAACACTTTCCTGGCAGGGAACAGGCCAAGTGATCTACAAAGGTTTTCTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR GCA 90 bp GCAGTGACATTTGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCCAGCATCCTGGCTTCTaGATGGGGTATCCCATGAAT +
Preference number: 4 (lower is better)
Translates to: AVTFGKGGIRISTSTHSSQHPGF*MGYPMN
Trigger: ATTCATGGGATACCCCATGCAGAAGCCAGGATGCTG...GGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCAAATGTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR GCA 90 bp TTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGCTCCCTAGTGGATTCTaGAGTCCAATCGCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: FLCVIRGILYCEGAIASLLPSGF*SPIAGL
Trigger: AAGGCCTGCGATTGGACTGCAGAATCCACTAGGGAG...CAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530135.5
CDS-3UTR CCA 90 bp GCAGTGACATTTGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCAGATGTAATGCACCATaGCTGGGTCCTGGGTACACT +
Preference number: 4 (lower is better)
Translates to: AVTFGKGGIRISTSTHSSRCNAP*LGPGYT
Trigger: AGTGTACCCAGGACCCAGCCATGGTGCATTACATCT...GGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCAAATGTCACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp TTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTTGCTTCCGGGGAGCTaGCTTGGTGTTATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: FLCVIRGILYCEGAIASLLLPGS*LGVILH
Trigger: ATGGAGGATAACACCAAGCCAGCTCCCCGGAAGCAA...CAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp GCTCATCCACAGCCAGGTCAATGTAAGTTGAGGGGGAGTGCTGGTAAACCAATGGGTTGTAATGGATCATaGAGTGACTTCTTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: AHPQPGQCKLRGSAGKPMGCNGS*SDFLVS
Trigger: AGAGACCAAGAAGTCACTCCATGATCCATTACAACC...CATTGGTTTACCAGCACTCCCCCTCAACTTACATTGACCTGGCTGTGGATGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR TCA 90 bp ATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAACCGGCTCAATCTTTGTaGGAACCAAATGGCTATGGG +
Preference number: 4 (lower is better)
Translates to: ILYCEGAIASLSCRTAAKPAQSL*EPNGYG
Trigger: CCCATAGCCATTTGGTTCTCACAAAGATTGAGCCGG...TTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR TCA 90 bp TTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGCCGGCTCAATCTTTGTaGGAACCAAATGGCTATGGG +
Preference number: 4 (lower is better)
Translates to: FLCVIRGILYCEGAIASLPAQSL*EPNGYG
Trigger: CCCATAGCCATTTGGTTCTCACAAAGATTGAGCCGG...CAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR TCA 90 bp GAGAAACAGAGGACAGCAAGACAAGAGGAGGCTAGAGTTGGGGTCCTCACCCTTGTAAAACAAAAGGCTTaGAGTAGGCTGTATCAGAAT +
Preference number: 4 (lower is better)
Translates to: EKQRTARQEEARVGVLTLVKQKA*SRLYQN
Trigger: ATTCTGATACAGCCTACTTCAAGCCTTTTGTTTTAC...AAGGGTGAGGACCCCAACTCTAGCCTCCTCTTGTCTTGCTGTCCTCTGTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR GCA 90 bp TACGTATTTGATGCTTCCTTGGGCAATGGAAAAACTATGGGATTTGTAGTATTTCCGGTGGTGCTCTCCTaGTCTATCCGCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: YVFDASLGNGKTMGFVVFPVVLS*SIRCCG
Trigger: GCCACAGCAGCGGATAGAGCAGGAGAGCACCACCGG...AAATACTACAAATCCCATAGTTTTTCCATTGCCCAAGGAAGCATCAAATACGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR GCA 90 bp TGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGTGATTGAAAGTGTTAGGATTTaGTTCCGGGGAGCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: WERRHTYFHFYTLFLCVIESVRI*FRGAGL
Trigger: CAAGCCAGCTCCCCGGAAGCAAATCCTAACACTTTC...AATCACACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR GCA 90 bp CTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCACTTGGCCTGTTCCCTaGCAGGAAAGTGTTAGGATT +
Preference number: 4 (lower is better)
Translates to: LCVIRGILYCEGAIASLSTWPVP*QESVRI
Trigger: AATCCTAACACTTTCCTGGCAGGGAACAGGCCAAGT...GGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp TGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTAGATGTAATGCACCATaGCTGGGTCCTGGGTACACT +
Preference number: 4 (lower is better)
Translates to: CVIRGILYCEGAIASLSCRCNAP*LGPGYT
Trigger: AGTGTACCCAGGACCCAGCCATGGTGCATTACATCT...ACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp TTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGAGATGTAATGCACCATaGCTGGGTCCTGGGTACACT +
Preference number: 4 (lower is better)
Translates to: FLCVIRGILYCEGAIASLRCNAP*LGPGYT
Trigger: AGTGTACCCAGGACCCAGCCATGGTGCATTACATCT...CAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp GAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGTGATTAGATTGCTTCCGGGGAGCTaGCTTGGTGTTATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: ERRHTYFHFYTLFLCVIRLLPGS*LGVILH
Trigger: ATGGAGGATAACACCAAGCCAGCTCCCCGGAAGCAA...TCTAATCACACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp CACTTTATTATTACATCTACCAAGCTTAGTGGAAGGACAGGGCTAGGGGAAATAGAGGCTTCAGCATCCTaGCTTCTGCATGGGGTATCC +
Preference number: 4 (lower is better)
Translates to: HFIITSTKLSGRTGLGEIEASAS*LLHGVS
Trigger: GGATACCCCATGCAGAAGCCAGGATGCTGAAGCCTC...TATTTCCCCTAGCCCTGTCCTTCCACTAAGCTTGGTAGATGTAATAATAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR CCA 90 bp CATTCCAGGCATAGAGCTGCTTATCTCTGGGGTTGTAATGGATCATGGAGTGACACTGATAGTGCCCAGTaGATCATAGATGCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: HSRHRAAYLWGCNGSWSDTDSAQ*IIDAGD
Trigger: ATCACCTGCATCTATGATCCACTGGGCACTATCAGT...GTCACTCCATGATCCATTACAACCCCAGAGATAAGCAGCTCTATGCCTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR CCA 90 bp GCTAGAGTTGGGGTCCTCACCCTTAGACTGGTTTTCTGGAGGAATTATCATTTGGACTTCTTGGTCTCTTaGGGAAGAACAAGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: ARVGVLTLRLVFWRNYHLDFLVS*GRTSWA
Trigger: TGCCCAACTTGTTCTTCCCCAAGAGACCAAGAAGTC...CAAATGATAATTCCTCCAGAAAACCAGTCTAAGGGTGAGGACCCCAACTCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR CCA 90 bp CTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCGACTTCTTGGTCTCTTaGGGAAGAACAAGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LCVIRGILYCEGAIASLSDFLVS*GRTSWA
Trigger: TGCCCAACTTGTTCTTCCCCAAGAGACCAAGAAGTC...GGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp GGAGCTGGCTTGGTGTTATCCTCCATGAATGCCCGTATGTTTGCAAATTCCCAACATGGAGTGACTTCTTaGTCTCTTGGGGAAGAACAA +
Preference number: 4 (lower is better)
Translates to: GAGLVLSSMNARMFANSQHGVTS*SLGEEQ
Trigger: TTGTTCTTCCCCAAGAGACCAAGAAGTCACTCCATG...TTGGGAATTTGCAAACATACGGGCATTCATGGAGGATAACACCAAGCCAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR CAA 72 bp TATCTCTGGGGTTGTAATGGATCATGGAGTGACTTCTaGGTCTCTTGGGGAAGAACAAGTTGGGCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: YLWGCNGSWSDF*VSWGRTSWASP
Trigger: AGGACTTGCCCAACTTGTTCTTCCCCAAGAGACCAAGAAGTCACTCCATGATCCATTACAACCCCAGAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR TCA 90 bp ACACTCTTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCAGATACCTAAGGCAGTaGCATTTGGGAAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TLFLCVIRGILYCEGAIARYLRQ*HLGKEA
Trigger: TGCCTCCTTTCCCAAATGTCACTGCCTTAGGTATCT...GGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000528758.1
CDS-3UTR TCA 90 bp TGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTGGTCTTGTGCAGACATaGAAACTGGCTAAAGGGACA +
Preference number: 4 (lower is better)
Translates to: CVIRGILYCEGAIASLSCGLVQT*KLAKGT
Trigger: TGTCCCTTTAGCCAGTTTTCATGTCTGCACAAGACC...ACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR GCA 90 bp TATAGACAGCATCTTTCATCCAAGAGCCATGTGTGTCCATCATCTTCTTCACTAGAACAGAACCAGCAATaGAGAAGCTCCTCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: YRQHLSSKSHVCPSSSSLEQNQQ*RSSSKG
Trigger: GCCCTTCGAGGAGCTTCTGCATTGCTGGTTCTGTTC...TAGTGAAGAAGATGATGGACACACATGGCTCTTGGATGAAAGATGCTGTCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR GCA 90 bp AGAGAAAAGCCAGTGGTGAATATTAGGGGCTGGCATACAACTCTAATTGTGGGAACGTTCAACTCTCAGTaGCAAGTTACCCACTGCACT +
Preference number: 4 (lower is better)
Translates to: REKPVVNIRGWHTTLIVGTFNSQ*QVTHCT
Trigger: AGTGCAGTGGGTAACTTGGCACTGAGAGTTGAACGT...TCCCACAATTAGAGTTGTATGCCAGCCCCTAATATTCACCACTGGCTTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR GCA 90 bp TTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGACGTTCAACTCTCAGTaGCAAGTTACCCACTGCACT +
Preference number: 4 (lower is better)
Translates to: FLCVIRGILYCEGAIASLTFNSQ*QVTHCT
Trigger: AGTGCAGTGGGTAACTTGGCACTGAGAGTTGAACGT...CAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR GCA 90 bp GAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGTGATTAGATGTCCTCTGATTCGATaGACTCGTCAGCCTCTCGAA +
Preference number: 4 (lower is better)
Translates to: ERRHTYFHFYTLFLCVIRCPLIR*TRQPLE
Trigger: TTCGAGAGGCTGACGAGTGCATCGAATCAGAGGACA...TCTAATCACACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR GCA 90 bp TTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGACTTGGCCTGTTCCCTaGCAGGAAAGTGTTAGGATT +
Preference number: 4 (lower is better)
Translates to: FLCVIRGILYCEGAIASLTWPVP*QESVRI
Trigger: AATCCTAACACTTTCCTGGCAGGGAACAGGCCAAGT...CAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR GCA 90 bp GCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCTCCACAGTCCTCTTCTaGAGGTTATATTTGATTATC +
Preference number: 4 (lower is better)
Translates to: AIASLSCRTAAKATVLFLSTVLF*RLYLII
Trigger: GATAATCAAATATAACCTGCAGAAGAGGACTGTGGA...GAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR GCA 90 bp GCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCCCTGATGAGGTTATTTaGTCAGTGTCACTTTTATTG +
Preference number: 4 (lower is better)
Translates to: AIASLSCRTAAKATVLFLPDEVI*SVSLLL
Trigger: CAATAAAAGTGACACTGAGCAAATAACCTCATCAGG...GAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR CCA 90 bp GTAGGTGAACAAACATACGTATTTGATGCTTCCTTGGGCAATGGAAAAACTATGAGAACCAAATGGCTATaGGTGCCTGGCCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: VGEQTYVFDASLGNGKTMRTKWL*VPGPEW
Trigger: CCACTCTGGGCCAGGCACCCATAGCCATTTGGTTCT...CATAGTTTTTCCATTGCCCAAGGAAGCATCAAATACGTATGTTTGTTCACCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR CCA 90 bp GCCCGTATGTTTGCAAATTCCCAAACAGTGTTGTTTCTGGATCCAATTAATAAGAGAACCAAATGGCTATaGGTGCCTGGCCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: ARMFANSQTVLFLDPINKRTKWL*VPGPEW
Trigger: CCACTCTGGGCCAGGCACCCATAGCCATTTGGTTCT...CTTATTAATTGGATCCAGAAACAACACTGTTTGGGAATTTGCAAACATACGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR CCA 90 bp GCCCGTATGTTTGCAAATTCCCAAACAGTGTTGTTTCTGGATCCAATTAATAAGGAGGCTTCAGCATCCTaGCTTCTGCATGGGGTATCC +
Preference number: 4 (lower is better)
Translates to: ARMFANSQTVLFLDPINKEASAS*LLHGVS
Trigger: GGATACCCCATGCAGAAGCCAGGATGCTGAAGCCTC...CTTATTAATTGGATCCAGAAACAACACTGTTTGGGAATTTGCAAACATACGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR CCA 90 bp GCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCTATTTGATGCTTCCTTaGGCAATGGAAAAACTATGG +
Preference number: 4 (lower is better)
Translates to: AIASLSCRTAAKATVLFLYLMLP*AMEKLW
Trigger: CCATAGTTTTTCCATTGCCCAAGGAAGCATCAAATA...GAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR TCA 90 bp GTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTAGATGGTGTTATCCTCCATaGATGCCCGTATGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: VIRGILYCEGAIASLSCRWCYPP*MPVCLQ
Trigger: TTGCAAACATACGGGCATTCATGGAGGATAACACCA...TCTACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR TCA 90 bp ACACTCTTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTGGTGTTATCCTCCATaGATGCCCGTATGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: TLFLCVIRGILYCEGAIAWCYPP*MPVCLQ
Trigger: TTGCAAACATACGGGCATTCATGGAGGATAACACCA...GGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR TCA 90 bp TGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTAGGGATACTATATTGTaGAGGGGCTATAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: CVIRGILYCEGAIASLSCRDTIL*RGYSLT
Trigger: AGTGAGGCTATAGCCCCTTCACAATATAGTATCCCT...ACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR TCA 90 bp GAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGTGATTAGAAGATACCTAAGGCAGTaGCATTTGGGAAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: ERRHTYFHFYTLFLCVIRRYLRQ*HLGKEA
Trigger: TGCCTCCTTTCCCAAATGTCACTGCCTTAGGTATCT...TCTAATCACACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000528758.1
CDS-3UTR GCA 90 bp GCAGTGACATTTGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCGAATTCTTGAATGTATaGCCTCGTTGCTTGGGTACA +
Preference number: 4 (lower is better)
Translates to: AVTFGKGGIRISTSTHSSEFLNV*PRCLGT
Trigger: TGTACCCAAGCAACGAGGGCATACATTCAAGAATTC...GGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCAAATGTCACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR GCA 90 bp ATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAATGCCAAGTTACCCACTaGACTCTTGTACTCACTTGT +
Preference number: 4 (lower is better)
Translates to: ILYCEGAIASLSCRTAAKCQVTH*TLVLTC
Trigger: ACAAGTGAGTACAAGAGTGCAGTGGGTAACTTGGCA...TTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR GCA 90 bp GTGAATATTAGGGGCTGGCATACAACTCTAATTGTGGGAGGGAAGATGGCAGAGGTTATCCTCCATGAATaGCCGTATGTTTGCAAATTC +
Preference number: 4 (lower is better)
Translates to: VNIRGWHTTLIVGGKMAEVILHE*PYVCKF
Trigger: GAATTTGCAAACATACGGGCATTCATGGAGGATAAC...CTCTGCCATCTTCCCTCCCACAATTAGAGTTGTATGCCAGCCCCTAATATTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR GCA 90 bp TACACACTCTTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATACAGCATCCTGGCTTCTaGATGGGGTATCCCATGAAT +
Preference number: 4 (lower is better)
Translates to: YTLFLCVIRGILYCEGAIQHPGF*MGYPMN
Trigger: ATTCATGGGATACCCCATGCAGAAGCCAGGATGCTG...TATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAAGAGTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp TGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTACTGATAGTGCCCAGTaGATCATAGATGCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: CVIRGILYCEGAIASLSCTDSAQ*IIDAGD
Trigger: ATCACCTGCATCTATGATCCACTGGGCACTATCAGT...ACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp CTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCGGTTGTAATGGATCATaGAGTGACTTCTTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LCVIRGILYCEGAIASLSGCNGS*SDFLVS
Trigger: AGAGACCAAGAAGTCACTCCATGATCCATTACAACC...GGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp TGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGTGATTAGAGCTGCTTATCTCTaGGGTTGTAATGGATCATGG +
Preference number: 4 (lower is better)
Translates to: WERRHTYFHFYTLFLCVIRAAYL*GCNGSW
Trigger: CCATGATCCATTACAACCCCAGAGATAAGCAGCTCT...AATCACACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp TTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGAGAGCTGCTTATCTCTaGGGTTGTAATGGATCATGG +
Preference number: 4 (lower is better)
Translates to: FLCVIRGILYCEGAIASLRAAYL*GCNGSW
Trigger: CCATGATCCATTACAACCCCAGAGATAAGCAGCTCT...CAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp AAGGTGAAACGAGAATTAAATGATGTGCAAACACTCCACACCTGGAAAGCGATAGAGAGCCAGGAGGTTTaGGGGAGTAATGGACATTGT +
Preference number: 4 (lower is better)
Translates to: KVKRELNDVQTLHTWKAIESQEV*GSNGHC
Trigger: ACAATGTCCATTACTCCCCCAAACCTCCTGGCTCTC...TATCGCTTTCCAGGTGTGGAGTGTTTGCACATCATTTAATTCTCGTTTCACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR CCA 90 bp CACTTTATTATTACATCTACCAAGCTTAGTGGAAGGACAGGGCTAGGGGAAATAGGCTGTATCAGAATGTaGTCATCCTTGAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: HFIITSTKLSGRTGLGEIGCIRM*SSLRAR
Trigger: CCTGGCTCTCAAGGATGACCACATTCTGATACAGCC...TATTTCCCCTAGCCCTGTCCTTCCACTAAGCTTGGTAGATGTAATAATAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR TCA 90 bp GTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTAGAAACTCTTGGAATTCTTaGATGTATGCCCTCGTTGCT +
Preference number: 4 (lower is better)
Translates to: VIRGILYCEGAIASLSCRNSWNS*MYALVA
Trigger: AGCAACGAGGGCATACATTCAAGAATTCCAAGAGTT...TCTACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR TCA 90 bp TGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGTGATTAACTCTTGGAATTCTTaGATGTATGCCCTCGTTGCT +
Preference number: 4 (lower is better)
Translates to: WERRHTYFHFYTLFLCVINSWNS*MYALVA
Trigger: AGCAACGAGGGCATACATTCAAGAATTCCAAGAGTT...AATCACACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR TCA 90 bp TTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGACAAACATACGTATTTaGTGCTTCCTTGGGCAATGG +
Preference number: 4 (lower is better)
Translates to: FLCVIRGILYCEGAIASLTNIRI*CFLGQW
Trigger: CCATTGCCCAAGGAAGCATCAAATACGTATGTTTGT...CAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR GCA 90 bp CACTTTATTATTACATCTACCAAGCTTAGTGGAAGGACAGGGCTAGGGGAAATATACGTGAGCTCAGTTTaGCAGCTAGTGATCAAGTCC +
Preference number: 4 (lower is better)
Translates to: HFIITSTKLSGRTGLGEIYVSSV*QLVIKS
Trigger: GGACTTGATCACTAGCTGGCAAACTGAGCTCACGTA...TATTTCCCCTAGCCCTGTCCTTCCACTAAGCTTGGTAGATGTAATAATAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR GCA 90 bp GTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTAGAAATGTATGCCCTCGTTaGTTGGGTACATTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: VIRGILYCEGAIASLSCRNVCPR*LGTFFQ
Trigger: CTGGAAAAATGTACCCAAGCAACGAGGGCATACATT...TCTACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR GCA 90 bp CACTTTATTATTACATCTACCAAGCTTAGTGGAAGGACAGGGCTAGGGGAAATAACTTGGCCTGTTCCCTaGCAGGAAAGTGTTAGGATT +
Preference number: 4 (lower is better)
Translates to: HFIITSTKLSGRTGLGEITWPVP*QESVRI
Trigger: AATCCTAACACTTTCCTGGCAGGGAACAGGCCAAGT...TATTTCCCCTAGCCCTGTCCTTCCACTAAGCTTGGTAGATGTAATAATAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR CCA 90 bp TACACACTCTTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATATATGCCCTCGTTGCTTaGGTACATTTTTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: YTLFLCVIRGILYCEGAIYALVA*VHFSSP
Trigger: AGGGCTGGAAAAATGTACCCAAGCAACGAGGGCATA...TATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAAGAGTGTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CCA 90 bp TTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCTTCTTCAGCTTCTTaGAGCAACATTTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: FLCVIRGILYCEGAIASLSSSAS*SNISAS
Trigger: ACTGGCAGAAATGTTGCTCCAAGAAGCTGAAGAAGA...CAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CCA 90 bp TGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGTGATTTCTTCTTCAGCTTCTTaGAGCAACATTTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: WERRHTYFHFYTLFLCVISSSAS*SNISAS
Trigger: ACTGGCAGAAATGTTGCTCCAAGAAGCTGAAGAAGA...AATCACACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CCA 90 bp GAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGTGATTAGACATGGAGTGACTTCTTaGTCTCTTGGGGAAGAACAA +
Preference number: 4 (lower is better)
Translates to: ERRHTYFHFYTLFLCVIRHGVTS*SLGEEQ
Trigger: TTGTTCTTCCCCAAGAGACCAAGAAGTCACTCCATG...TCTAATCACACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp GCAGTGACATTTGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCGTGAATATTAGGGGCTaGCATACAACTCTAATTGTG +
Preference number: 4 (lower is better)
Translates to: AVTFGKGGIRISTSTHSSVNIRG*HTTLIV
Trigger: CACAATTAGAGTTGTATGCCAGCCCCTAATATTCAC...GGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCAAATGTCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR CCA 90 bp GCAGTGACATTTGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGCAGACATGAAAACTaGCTAAAGGGACAGACTATT +
Preference number: 4 (lower is better)
Translates to: AVTFGKGGIRISTSTHSSCRHEN*LKGQTI
Trigger: AATAGTCTGTCCCTTTAGCCAGTTTTCATGTCTGCA...GGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCAAATGTCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR GCA 90 bp GAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGTGATTAGAAATGTATGCCCTCGTTaGTTGGGTACATTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ERRHTYFHFYTLFLCVIRNVCPR*LGTFFQ
Trigger: CTGGAAAAATGTACCCAAGCAACGAGGGCATACATT...TCTAATCACACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CCA 90 bp CACTTTATTATTACATCTACCAAGCTTAGTGGAAGGACAGGGCTAGGGGAAATAACTGATAGTGCCCAGTaGATCATAGATGCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: HFIITSTKLSGRTGLGEITDSAQ*IIDAGD
Trigger: ATCACCTGCATCTATGATCCACTGGGCACTATCAGT...TATTTCCCCTAGCCCTGTCCTTCCACTAAGCTTGGTAGATGTAATAATAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR TCA 90 bp GAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGTGATTAGATCTGGAGTTTGTAAATaGTCTGGTTTCCTTCATTCC +
Preference number: 4 (lower is better)
Translates to: ERRHTYFHFYTLFLCVIRSGVCK*SGFLHS
Trigger: GGAATGAAGGAAACCAGATCATTTACAAACTCCAGA...TCTAATCACACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR GCA 90 bp TGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGTGATTTCCACAGTCCTCTTCTaGAGGTTATATTTGATTATC +
Preference number: 4 (lower is better)
Translates to: WERRHTYFHFYTLFLCVISTVLF*RLYLII
Trigger: GATAATCAAATATAACCTGCAGAAGAGGACTGTGGA...AATCACACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp TACACACTCTTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATATTGCAAGCTGCTTCCTaGCTTAATTGTGTGTGCATT +
Preference number: 4 (lower is better)
Translates to: YTLFLCVIRGILYCEGAILQAAS*LNCVCI
Trigger: AATGCACACACAATTAAGCCAGGAAGCAGCTTGCAA...TATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAAGAGTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CCA 90 bp AGAGAAAAGCCAGTGGTGAATATTAGGGGCTGGCATACAACTCTAATTGTGGGAAGTTACAGTAAATGCTaGGGAGCAGTAAAACAAAAG +
Preference number: 4 (lower is better)
Translates to: REKPVVNIRGWHTTLIVGSYSKC*GAVKQK
Trigger: CTTTTGTTTTACTGCTCCCCAGCATTTACTGTAACT...TCCCACAATTAGAGTTGTATGCCAGCCCCTAATATTCACCACTGGCTTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR GCA 90 bp GTAGGTGAACAAACATACGTATTTGATGCTTCCTTGGGCAATGGAAAAACTATGGAATTCTTGAATGTATaGCCTCGTTGCTTGGGTACA +
Preference number: 4 (lower is better)
Translates to: VGEQTYVFDASLGNGKTMEFLNV*PRCLGT
Trigger: TGTACCCAAGCAACGAGGGCATACATTCAAGAATTC...CATAGTTTTTCCATTGCCCAAGGAAGCATCAAATACGTATGTTTGTTCACCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR GCA 90 bp TACACACTCTTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGTTATCCTCCATGAATaGCCGTATGTTTGCAAATTC +
Preference number: 4 (lower is better)
Translates to: YTLFLCVIRGILYCEGAIVILHE*PYVCKF
Trigger: GAATTTGCAAACATACGGGCATTCATGGAGGATAAC...TATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAAGAGTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR GCA 90 bp GAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGTGATTAGATCCACAGTCCTCTTCTaGAGGTTATATTTGATTATC +
Preference number: 4 (lower is better)
Translates to: ERRHTYFHFYTLFLCVIRSTVLF*RLYLII
Trigger: GATAATCAAATATAACCTGCAGAAGAGGACTGTGGA...TCTAATCACACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CCA 90 bp GTAGGTGAACAAACATACGTATTTGATGCTTCCTTGGGCAATGGAAAAACTATGTCCTCACCCTTAGACTaGTTTTCTGGAGGAATTATC +
Preference number: 4 (lower is better)
Translates to: VGEQTYVFDASLGNGKTMSSPLD*FSGGII
Trigger: GATAATTCCTCCAGAAAACCAGTCTAAGGGTGAGGA...CATAGTTTTTCCATTGCCCAAGGAAGCATCAAATACGTATGTTTGTTCACCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329293.4
3UTR CAA 72 bp CAGTGTTGTTTCTGGATCCAATTAATAAGTACACCTTaGGAGAGTTATAGACAGCATCTTTCATCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: QCCFWIQLISTP*ESYRQHLSSKS
Trigger: GCTCTTGGATGAAAGATGCTGTCTATAACTCTCCAAAGGTGTACTTATTAATTGGATCCAGAAACAACACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR TCA 90 bp GTAGGTGAACAAACATACGTATTTGATGCTTCCTTGGGCAATGGAAAAACTATGCTATTATTTTTAGGCTaGAACGATGAACGCATTGAC +
Preference number: 4 (lower is better)
Translates to: VGEQTYVFDASLGNGKTMLLFLG*NDERID
Trigger: GTCAATGCGTTCATCGTTTCAGCCTAAAAATAATAG...CATAGTTTTTCCATTGCCCAAGGAAGCATCAAATACGTATGTTTGTTCACCTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329293.4
3UTR CAA 72 bp ATGAATGCCCGTATGTTTGCAAATTCCCAAACAGTGTaGTTTCTGGATCCAATTAATAAGTACACCTTTGGA +
Preference number: 4 (lower is better)
Translates to: MNARMFANSQTV*FLDPINKYTFG
Trigger: TCCAAAGGTGTACTTATTAATTGGATCCAGAAACAACACTGTTTGGGAATTTGCAAACATACGGGCATTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
3UTR CAA 72 bp AGAGTAGGTGAACAAACATACGTATTTGATGCTTCCTaGGGCAATGGAAAAACTATGGGATTTGTAGTATTT +
Preference number: 4 (lower is better)
Translates to: RVGEQTYVFDAS*GNGKTMGFVVF
Trigger: AAATACTACAAATCCCATAGTTTTTCCATTGCCCAAGGAAGCATCAAATACGTATGTTTGTTCACCTACTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS TCA 90 bp TGTGGCAGAGAGCTCCCTGGGTCCAGCATCTGTTGCCCTCACCCTTaGCACATGCGGACCCTCCCCAGGCTAGTGGTTGCAAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: CGRELPGSSICCPHP*HMRTLPRLVVASCF
Trigger: GAAGCAGCTTGCAACCACTAGCCTGGGGAGGGTCCGCATGTGTCAAGGGTGAGGGCAACAGATGCTGGACCCAGGGAGCTCTCTGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000530135.5
ENST00000534244.1
CDS-3UTR CAA 90 bp GGGGGAGTGCTGGTAAACCAATGCTCGGCCTACCCCTCCTGGGAGCAGCATTCGGATCAAGTCCAGCTGTaGGCAAGTTGGTCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: GGVLVNQCSAYPSWEQHSDQVQL*ASWSLR
Trigger: CCTCAGGGACCAACTTGCCAACAGCTGGACTTGATC...CGAATGCTGCTCCCAGGAGGGGTAGGCCGAGCATTGGTTTACCAGCACTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS GCA 90 bp TTGCCCTCACCCTTGACACATGCGGACCCTCCCCAGGCTAGTGGTTaGAAGCTGCTTCCTGGCTTAATTGTGTGTGCATTGGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: LPSPLTHADPPQASG*KLLPGLIVCALGWG
Trigger: CCCCCACCCCAATGCACACACAATTAAGCCAGGAAGCAGCTTGCAACCACTAGCCTGGGGAGGGTCCGCATGTGTCAAGGGTGAGGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000530135.5
ENST00000534244.1
CDS-3UTR CAA 90 bp AGTGCCCAGTGGATCATAGATGCAGGTGATGCGATGAGGGCCCTGGCCCCCAGTACCTTTGTAGATCACTaGGCCTGTTCCCTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: SAQWIIDAGDAMRALAPSTFVDH*ACSLPG
Trigger: TCCTGGCAGGGAACAGGCCAAGTGATCTACAAAGGT...ACTGGGGGCCAGGGCCCTCATCGCATCACCTGCATCTATGATCCACTGGGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR CAA 90 bp AAATGGCTATGGGTGCCTGGCCCAGAGTGGATGGCCCAGAGCCCATGCTCATCCCCAGGTCAATGTAAGTaGAGGGGGAGTGCTGGTAAA +
Preference number: 5 (lower is better)
Translates to: KWLWVPGPEWMAQSPCSSPGQCK*RGSAGK
Trigger: TTTACCAGCACTCCCCCTCAACTTACATTGACCTGG...GGATGAGCATGGGCTCTGGGCCATCCACTCTGGGCCAGGCACCCATAGCCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR CAA 90 bp TGGCTTCTGCATGGGGTATCCCATGAATGCTCCACTCCCAGTGTGCCCGGCTCATTGGGGAAGAACAAGTaGGGCAAGTCCTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: WLLHGVSHECSTPSVPGSLGKNK*GKSSSL
Trigger: CAGTGAGGAGGACTTGCCCAACTTGTTCTTCCCCAA...TGAGCCGGGCACACTGGGAGTGGAGCATTCATGGGATACCCCATGCAGAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR CAA 90 bp AACCAAATGGCTATGGGTGCCTGGCCCAGAGTGGATGGCCCAGAGCCCATGCTCTCATGGAGTGACTTCTaGGTCTCTTGGGGAAGAACA +
Preference number: 5 (lower is better)
Translates to: NQMAMGAWPRVDGPEPMLSWSDF*VSWGRT
Trigger: TGTTCTTCCCCAAGAGACCAAGAAGTCACTCCATGA...GAGCATGGGCTCTGGGCCATCCACTCTGGGCCAGGCACCCATAGCCATTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR CAA 90 bp TGGCTTCTGCATGGGGTATCCCATGAATGCTCCACTCCCAGTGTGCCCGGCTCAGCATGTTGTCACAGCTaGGGTACATTTTTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: WLLHGVSHECSTPSVPGSACCHS*GTFFQP
Trigger: GGGCTGGAAAAATGTACCCAAGCTGTGACAACATGC...TGAGCCGGGCACACTGGGAGTGGAGCATTCATGGGATACCCCATGCAGAAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR CAA 90 bp GAAGGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCGTATGCCCTCGTTGCTaGGGTACATTTTTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: EGAIASLSCRTAAKATVLVCPRC*GTFFQP
Trigger: GGGCTGGAAAAATGTACCCAAGCAACGAGGGCATAC...GAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CAA 90 bp GAAGGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTCCGGGGAGCTGGCTaGGTGTTATCCTCCATGAAT +
Preference number: 5 (lower is better)
Translates to: EGAIASLSCRTAAKATVLFRGAG*VLSSMN
Trigger: ATTCATGGAGGATAACACCAAGCCAGCTCCCCGGAA...GAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS GCA 90 bp AAGGATGTCTCAAGGGCTCCGGTGGTGCTCTCCTGCTCTATCCGCTaGTGTGGCAAATCCTCTAAAAACAGCGTTTTGCACAGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: KDVSRAPVVLSCSIR*CGKSSKNSVLHSRE
Trigger: CTCTCTGCTGTGCAAAACGCTGTTTTTAGAGGATTTGCCACAGCAGCGGATAGAGCAGGAGAGCACCACCGGAGCCCTTGAGACATCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000528758.1
ENST00000534244.1
CDS GCA 90 bp GTGGCTCTTCTCAAGGATGTCTCAAGGGCTCCGGTGGTGCTCTCCTaGTCTATCCGCTGCTGTGGCAAATCCTCTAAAAACAGCGTTTTG +
Preference number: 5 (lower is better)
Translates to: VALLKDVSRAPVVLS*SIRCCGKSSKNSVL
Trigger: CAAAACGCTGTTTTTAGAGGATTTGCCACAGCAGCGGATAGAGCAGGAGAGCACCACCGGAGCCCTTGAGACATCCTTGAGAAGAGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000528758.1
ENST00000534244.1
CDS GCA 90 bp ACAGAACCAGCAATGCAGAAGCTCCTCGAAGGGCCACCATCATCCTaGAAAACACCAAGCAGGGCAGTCTCTTATGCTGTGGCTCTTCTC +
Preference number: 5 (lower is better)
Translates to: TEPAMQKLLEGPPSS*KTPSRAVSYAVALL
Trigger: GAGAAGAGCCACAGCATAAGAGACTGCCCTGCTTGGTGTTTTGCAGGATGATGGTGGCCCTTCGAGGAGCTTCTGCATTGCTGGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000528758.1
ENST00000534244.1
CDS-3UTR CAA 90 bp GAGAAACAGAGGACAGCAAGACAAGAGGAGGCTAGAGTTGGGGTCCTCACCCTTGTAGTCAATCTCCCGTaGGGCACGTTCAACTCTCAG +
Preference number: 5 (lower is better)
Translates to: EKQRTARQEEARVGVLTLVVNLP*GTFNSQ
Trigger: CTGAGAGTTGAACGTGCCCAACGGGAGATTGACTAC...AAGGGTGAGGACCCCAACTCTAGCCTCCTCTTGTCTTGCTGTCCTCTGTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR CAA 90 bp GGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTACCTTTGTAGATCACTaGGCCTGTTCCCTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: GAIASLSCRTAAKATVLFTFVDH*ACSLPG
Trigger: TCCTGGCAGGGAACAGGCCAAGTGATCTACAAAGGT...AAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CAA 90 bp ATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCACAGATCAAGTCCAGCTGTaGGCAAGTTGGTCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: IASLSCRTAAKATVLFLTDQVQL*ASWSLR
Trigger: CCTCAGGGACCAACTTGCCAACAGCTGGACTTGATC...TGTGAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000528758.1
CDS-3UTR CAA 90 bp TGTGAAGGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGACATTTTTCCAGCCCTaGCTCCAAGACTCGAAAGCG +
Preference number: 5 (lower is better)
Translates to: CEGAIASLSCRTAAKATVTFFQP*LQDSKA
Trigger: CGCTTTCGAGTCTTGGAGCAAGGGCTGGAAAAATGT...CACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCCTTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CAA 90 bp GCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCGTATGCCCTCGTTGCTaGGGTACATTTTTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: AIASLSCRTAAKATVLFLVCPRC*GTFFQP
Trigger: GGGCTGGAAAAATGTACCCAAGCAACGAGGGCATAC...GAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CAA 90 bp GAAGGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTCATGGAGTGACTTCTaGGTCTCTTGGGGAAGAACA +
Preference number: 5 (lower is better)
Translates to: EGAIASLSCRTAAKATVLSWSDF*VSWGRT
Trigger: TGTTCTTCCCCAAGAGACCAAGAAGTCACTCCATGA...GAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CAA 90 bp ATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCACAGTAGTCAATCTCCCGTaGGGCACGTTCAACTCTCAG +
Preference number: 5 (lower is better)
Translates to: IASLSCRTAAKATVLFLTVVNLP*GTFNSQ
Trigger: CTGAGAGTTGAACGTGCCCAACGGGAGATTGACTAC...TGTGAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CAA 90 bp ATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCACATTGGGGAAGAACAAGTaGGGCAAGTCCTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: IASLSCRTAAKATVLFLTLGKNK*GKSSSL
Trigger: CAGTGAGGAGGACTTGCCCAACTTGTTCTTCCCCAA...TGTGAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CAA 90 bp GAGAAACAGAGGACAGCAAGACAAGAGGAGGCTAGAGTTGGGGTCCTCACCCTTTCATGGAGTGACTTCTaGGTCTCTTGGGGAAGAACA +
Preference number: 5 (lower is better)
Translates to: EKQRTARQEEARVGVLTLSWSDF*VSWGRT
Trigger: TGTTCTTCCCCAAGAGACCAAGAAGTCACTCCATGA...AAGGGTGAGGACCCCAACTCTAGCCTCCTCTTGTCTTGCTGTCCTCTGTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR CAA 90 bp ATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCACAAGAATGTGGTCATCCTaGAGAGCCAGGAGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: IASLSCRTAAKATVLFLTRMWSS*RARRFG
Trigger: CCCAAACCTCCTGGCTCTCAAGGATGACCACATTCT...TGTGAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS GCA 90 bp AATCTCCCGTTGGGCACGTTCAACTCTCAGTGCCAAGTTACCCACTaGACTCTTGTACTCACTTGTGTAGGTCTGACATCTTCCCAGCAT +
Preference number: 5 (lower is better)
Translates to: NLPLGTFNSQCQVTH*TLVLTCVGLTSSQH
Trigger: ATGCTGGGAAGATGTCAGACCTACACAAGTGAGTACAAGAGTGCAGTGGGTAACTTGGCACTGAGAGTTGAACGTGCCCAACGGGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000530135.5
CDS-3UTR CAA 90 bp GCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCATTTCTGCCAGTGTCTaGTCCTCTGATTCGATGCAC +
Preference number: 5 (lower is better)
Translates to: AIASLSCRTAAKATVLFLISASV*SSDSMH
Trigger: GTGCATCGAATCAGAGGACAAGACACTGGCAGAAAT...GAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CAA 90 bp CATTCCAGGCATAGAGCTGCTTATCTCTGGGGTTGTAATGGATCATGGAGTGACACATTTTTCCAGCCCTaGCTCCAAGACTCGAAAGCG +
Preference number: 5 (lower is better)
Translates to: HSRHRAAYLWGCNGSWSDTFFQP*LQDSKA
Trigger: CGCTTTCGAGTCTTGGAGCAAGGGCTGGAAAAATGT...GTCACTCCATGATCCATTACAACCCCAGAGATAAGCAGCTCTATGCCTGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR CAA 90 bp GCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCGAATGTATGCCCTCGTaGCTTGGGTACATTTTTCCA +
Preference number: 5 (lower is better)
Translates to: AIASLSCRTAAKATVLFLECMPS*LGYIFP
Trigger: TGGAAAAATGTACCCAAGCAACGAGGGCATACATTC...GAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CAA 90 bp GCAGTGACATTTGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCACCTTTGTAGATCACTaGGCCTGTTCCCTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: AVTFGKGGIRISTSTHSSTFVDH*ACSLPG
Trigger: TCCTGGCAGGGAACAGGCCAAGTGATCTACAAAGGT...GGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCAAATGTCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CAA 90 bp TGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGTGATTAAGAGGAGGCTAGAGTaGGGGTCCTCACCCTTAGAC +
Preference number: 5 (lower is better)
Translates to: WERRHTYFHFYTLFLCVIKRRLE*GSSPLD
Trigger: GTCTAAGGGTGAGGACCCCAACTCTAGCCTCCTCTT...AATCACACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS GCA 90 bp GTATTGTATGTAGTCAATCTCCCGTTGGGCACGTTCAACTCTCAGTaGCAAGTTACCCACTGCACTCTTGTACTCACTTGTGTAGGTCTG +
Preference number: 5 (lower is better)
Translates to: VLYVVNLPLGTFNSQ*QVTHCTLVLTCVGL
Trigger: CAGACCTACACAAGTGAGTACAAGAGTGCAGTGGGTAACTTGGCACTGAGAGTTGAACGTGCCCAACGGGAGATTGACTACATACAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000530135.5
CDS GCA 90 bp CTTCTTGGAGCAACATTTCTGCCAGTGTCTTGTCCTCTGATTCGATaGACTCGTCAGCCTCTCGAAGGTATTGTATGTAGTCAATCTCCC +
Preference number: 5 (lower is better)
Translates to: LLGATFLPVSCPLIR*TRQPLEGIVCSQSP
Trigger: GGGAGATTGACTACATACAATACCTTCGAGAGGCTGACGAGTGCATCGAATCAGAGGACAAGACACTGGCAGAAATGTTGCTCCAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000530135.5
CDS-3UTR CAA 90 bp CCCCTCCTGGGAGCAGCATTCGATCTTCCACAGTCCTCTTCTGCAGGTTATATTTCTAAAAACAGCGTTTaGCACAGCAGAGAGCAAAGT +
Preference number: 5 (lower is better)
Translates to: PLLGAAFDLPQSSSAGYISKNSV*HSREQS
Trigger: ACTTTGCTCTCTGCTGTGCAAAACGCTGTTTTTAGA...AATATAACCTGCAGAAGAGGACTGTGGAAGATCGAATGCTGCTCCCAGGAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR CAA 90 bp GCTAGAGTTGGGGTCCTCACCCTTAGACTGGTTTTCTGGAGGAATTATCATTTGACATTTTTCCAGCCCTaGCTCCAAGACTCGAAAGCG +
Preference number: 5 (lower is better)
Translates to: ARVGVLTLRLVFWRNYHLTFFQP*LQDSKA
Trigger: CGCTTTCGAGTCTTGGAGCAAGGGCTGGAAAAATGT...CAAATGATAATTCCTCCAGAAAACCAGTCTAAGGGTGAGGACCCCAACTCTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR CAA 90 bp ATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCACAGAACTCTTGGAATTCTaGAATGTATGCCCTCGTTGC +
Preference number: 5 (lower is better)
Translates to: IASLSCRTAAKATVLFLTELLEF*NVCPRC
Trigger: GCAACGAGGGCATACATTCAAGAATTCCAAGAGTTC...TGTGAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CAA 90 bp ATAGCCTCACTGTCCTGTAGAACAGCTGCCAAAGCCACAGTGCTCTTTCTCACACACTCTTGTACTCACTaGTGTAGGTCTGACATCTTC +
Preference number: 5 (lower is better)
Translates to: IASLSCRTAAKATVLFLTHSCTH*CRSDIF
Trigger: GAAGATGTCAGACCTACACAAGTGAGTACAAGAGTG...TGTGAGAAAGAGCACTGTGGCTTTGGCAGCTGTTCTACAGGACAGTGAGGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CAA 90 bp TTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGGCATGTTGTCACAGCTaGCATTCAGCAGAGTCCGGA +
Preference number: 5 (lower is better)
Translates to: FLCVIRGILYCEGAIASLACCHS*HSAESG
Trigger: TCCGGACTCTGCTGAATGCAAGCTGTGACAACATGC...CAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CAA 90 bp GACATTTGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGCATGTTGTCACAGCTaGCATTCAGCAGAGTCCGGA +
Preference number: 5 (lower is better)
Translates to: DIWERRHTYFHFYTLFLCACCHS*HSAESG
Trigger: TCCGGACTCTGCTGAATGCAAGCTGTGACAACATGC...ACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCAAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CAA 90 bp ACACTCTTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTTCCGGGGAGCTGGCTaGGTGTTATCCTCCATGAAT +
Preference number: 5 (lower is better)
Translates to: TLFLCVIRGILYCEGAIAFRGAG*VLSSMN
Trigger: ATTCATGGAGGATAACACCAAGCCAGCTCCCCGGAA...GGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CAA 90 bp ATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTAGAACAGCTGCCAAATTCCGGGGAGCTGGCTaGGTGTTATCCTCCATGAAT +
Preference number: 5 (lower is better)
Translates to: ILYCEGAIASLSCRTAAKFRGAG*VLSSMN
Trigger: ATTCATGGAGGATAACACCAAGCCAGCTCCCCGGAA...TTTGGCAGCTGTTCTACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CAA 90 bp CTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCCCAGGTCAATGTAAGTaGAGGGGGAGTGCTGGTAAA +
Preference number: 5 (lower is better)
Translates to: LCVIRGILYCEGAIASLSPGQCK*RGSAGK
Trigger: TTTACCAGCACTCCCCCTCAACTTACATTGACCTGG...GGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CAA 90 bp ACACTCTTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTTGGGGAAGAACAAGTaGGGCAAGTCCTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: TLFLCVIRGILYCEGAIALGKNK*GKSSSL
Trigger: CAGTGAGGAGGACTTGCCCAACTTGTTCTTCCCCAA...GGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS-3UTR CAA 90 bp GTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTAGACCAGGTCAATGTAAGTaGAGGGGGAGTGCTGGTAAA +
Preference number: 5 (lower is better)
Translates to: VIRGILYCEGAIASLSCRPGQCK*RGSAGK
Trigger: TTTACCAGCACTCCCCCTCAACTTACATTGACCTGG...TCTACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528758.1
ENST00000530135.5
CDS TCA 90 bp GGCACTATAGCCTTCACCATCTATGGAGGCTTTAGGCACTGTGTGTaGAAGAAAGAATGGCTTTGCGAGAATGGATTTCTCTTTGGACAC +
Preference number: 5 (lower is better)
Translates to: GTIAFTIYGGFRHCV*KKEWLCENGFLFGH
Trigger: GTGTCCAAAGAGAAATCCATTCTCGCAAAGCCATTCTTTCTTTCACACACAGTGCCTAAAGCCTCCATAGATGGTGAAGGCTATAGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528308.1
CDS TCA 90 bp TCTCAGACAGCACACACAATAGTGATTCACTGCAGTTCCCATCCCTaGGGGTTGGCTGTTGCCATTTCCAATTTAAGACTGTTTCTTGGT +
Preference number: 5 (lower is better)
Translates to: SQTAHTIVIHCSSHP*GLAVAISNLRLFLG
Trigger: ACCAAGAAACAGTCTTAAATTGGAAATGGCAACAGCCAACCCTCAGGGATGGGAACTGCAGTGAATCACTATTGTGTGTGCTGTCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528308.1
CDS-3UTR CAA 90 bp AGAGAAAAGCCAGTGGTGAATATTAGGGGCTGGCATACAACTCTAATTGTGGGAATACGTGAGCTCAGTTaGCCAGCTAGTGATCAAGTC +
Preference number: 5 (lower is better)
Translates to: REKPVVNIRGWHTTLIVGIRELS*PASDQV
Trigger: GACTTGATCACTAGCTGGCAAACTGAGCTCACGTAT...TCCCACAATTAGAGTTGTATGCCAGCCCCTAATATTCACCACTGGCTTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR CAA 90 bp ACACTCTTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCAGCCTCTCGAAGGTATaGTATGTAGTCAATCTCCCG +
Preference number: 5 (lower is better)
Translates to: TLFLCVIRGILYCEGAIASLSKV*YVVNLP
Trigger: CGGGAGATTGACTACATACAATACCTTCGAGAGGCT...GGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CAA 90 bp GACATTTGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTAGCCTCTCGAAGGTATaGTATGTAGTCAATCTCCCG +
Preference number: 5 (lower is better)
Translates to: DIWERRHTYFHFYTLFLCSLSKV*YVVNLP
Trigger: CGGGAGATTGACTACATACAATACCTTCGAGAGGCT...ACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCAAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CAA 90 bp GTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTAGAATTTCTGCCAGTGTCTaGTCCTCTGATTCGATGCAC +
Preference number: 5 (lower is better)
Translates to: VIRGILYCEGAIASLSCRISASV*SSDSMH
Trigger: GTGCATCGAATCAGAGGACAAGACACTGGCAGAAAT...TCTACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CAA 90 bp GACATTTGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTCTCTTCTTCAGCTTCTaGGAGCAACATTTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: DIWERRHTYFHFYTLFLCLFFSF*EQHFCQ
Trigger: CTGGCAGAAATGTTGCTCCAAGAAGCTGAAGAAGAG...ACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCAAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CAA 90 bp TTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGCTCTTCTTCAGCTTCTaGGAGCAACATTTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: FLCVIRGILYCEGAIASLLFFSF*EQHFCQ
Trigger: CTGGCAGAAATGTTGCTCCAAGAAGCTGAAGAAGAG...CAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS GCA 90 bp CACAATAGTGATTCACTGCAGTTCCCATCCCTGAGGGTTGGCTGTTaGCATTTCCAATTTAAGACTGTTTCTTGGTACATTTGCAGATGC +
Preference number: 5 (lower is better)
Translates to: HNSDSLQFPSLRVGC*HFQFKTVSWYICRC
Trigger: GCATCTGCAAATGTACCAAGAAACAGTCTTAAATTGGAAATGGCAACAGCCAACCCTCAGGGATGGGAACTGCAGTGAATCACTATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528308.1
CDS-3UTR CAA 90 bp TACACACTCTTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGAGAGCAAAGTCCGCTaGTTATTCCACCCGATACGT +
Preference number: 5 (lower is better)
Translates to: YTLFLCVIRGILYCEGAIESKVR*LFHPIR
Trigger: ACGTATCGGGTGGAATAACAAGCGGACTTTGCTCTC...TATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAAGAGTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000528758.1
CDS-3UTR CAA 90 bp TGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTGAATGTATGCCCTCGTaGCTTGGGTACATTTTTCCA +
Preference number: 5 (lower is better)
Translates to: CVIRGILYCEGAIASLSCECMPS*LGYIFP
Trigger: TGGAAAAATGTACCCAAGCAACGAGGGCATACATTC...ACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CAA 90 bp GTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTAGAGAACTCTTGGAATTCTaGAATGTATGCCCTCGTTGC +
Preference number: 5 (lower is better)
Translates to: VIRGILYCEGAIASLSCRELLEF*NVCPRC
Trigger: GCAACGAGGGCATACATTCAAGAATTCCAAGAGTTC...TCTACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CAA 90 bp TGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCTGTCACTCTTGTACTCACTaGTGTAGGTCTGACATCTTC +
Preference number: 5 (lower is better)
Translates to: CVIRGILYCEGAIASLSCHSCTH*CRSDIF
Trigger: GAAGATGTCAGACCTACACAAGTGAGTACAAGAGTG...ACAGGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329293.4
ENST00000530135.5
CDS-3UTR CAA 90 bp CTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTCACTGTCCGACAGCTGTAAAGACTaGTGCATGTTTCACAAAGGT +
Preference number: 5 (lower is better)
Translates to: LCVIRGILYCEGAIASLSDSCKD*CMFHKG
Trigger: ACCTTTGTGAAACATGCACAAGTCTTTACAGCTGTC...GGACAGTGAGGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR CAA 90 bp TTATCCTCCATGAATGCCCGTATGTTTGCAAATTCCCAAACAGTGTTGTTTCTGATACGTGAGCTCAGTTaGCCAGCTAGTGATCAAGTC +
Preference number: 5 (lower is better)
Translates to: LSSMNARMFANSQTVLFLIRELS*PASDQV
Trigger: GACTTGATCACTAGCTGGCAAACTGAGCTCACGTAT...CAGAAACAACACTGTTTGGGAATTTGCAAACATACGGGCATTCATGGAGGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS-3UTR CAA 90 bp GCAGTGACATTTGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCAACAAACATACGTATTaGATGCTTCCTTGGGCAATG +
Preference number: 5 (lower is better)
Translates to: AVTFGKGGIRISTSTHSSNKHTY*MLPWAM
Trigger: CATTGCCCAAGGAAGCATCAAATACGTATGTTTGTT...GGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCAAATGTCACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR CAA 90 bp TGGGAAAGGAGGCATACGTATTTCCACTTCTACACACTCTTCCTGTGTGTGATTCATTTGAAAGGCCTATaGAAAGGTCTTGTGCAGACA +
Preference number: 5 (lower is better)
Translates to: WERRHTYFHFYTLFLCVIHLKGL*KGLVQT
Trigger: TGTCTGCACAAGACCTTTCAATAGGCCTTTCAAATG...AATCACACACAGGAAGAGTGTGTAGAAGTGGAAATACGTATGCCTCCTTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR CAA 90 bp ATAGACAGCATCTTTCATCCAAGAGCCATGTGTGTCCATCATCTTCTTCACTATATGCCCATCAGCATGTaGTCACAGCTTGGGTACATT +
Preference number: 5 (lower is better)
Translates to: IDSIFHPRAMCVHHLLHYMPISM*SQLGYI
Trigger: AATGTACCCAAGCTGTGACAACATGCTGATGGGCAT...ATAGTGAAGAAGATGATGGACACACATGGCTCTTGGATGAAAGATGCTGTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528758.1
CDS TCA 90 bp AATGCACACAAAAGCACACCTCCAATTCTTACTCTCATTACTCTATaGTGCTCCCTGACTGCTCTGAGTCTGTGTGTTTCTGAGCATAAT +
Preference number: 5 (lower is better)
Translates to: NAHKSTPPILTLITL*CSLTALSLCVSEHN
Trigger: ATTATGCTCAGAAACACACAGACTCAGAGCAGTCAGGGAGCATCATAGAGTAATGAGAGTAAGAATTGGAGGTGTGCTTTTGTGTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528308.1
CDS-3UTR CAA 90 bp AGAGAAAAGCCAGTGGTGAATATTAGGGGCTGGCATACAACTCTAATTGTGGGAGAAACGATGAACGCATaGACTATAAGAGTAGGTGAA +
Preference number: 5 (lower is better)
Translates to: REKPVVNIRGWHTTLIVGETMNA*TIRVGE
Trigger: TTCACCTACTCTTATAGTCAATGCGTTCATCGTTTC...TCCCACAATTAGAGTTGTATGCCAGCCCCTAATATTCACCACTGGCTTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR CAA 90 bp CACTTTATTATTACATCTACCAAGCTTAGTGGAAGGACAGGGCTAGGGGAAATATCTAAAAACAGCGTTTaGCACAGCAGAGAGCAAAGT +
Preference number: 5 (lower is better)
Translates to: HFIITSTKLSGRTGLGEISKNSV*HSREQS
Trigger: ACTTTGCTCTCTGCTGTGCAAAACGCTGTTTTTAGA...TATTTCCCCTAGCCCTGTCCTTCCACTAAGCTTGGTAGATGTAATAATAAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR CAA 90 bp ACACTCTTCCTGTGTGTGATTAGAGGGATACTATATTGTGAAGGGGCTATAGCCTGGAGGAATTATCATTaGAAAGGCCTATTGAAAGGT +
Preference number: 5 (lower is better)
Translates to: TLFLCVIRGILYCEGAIAWRNYH*KGLLKG
Trigger: ACCTTTCAATAGGCCTTTCAAATGATAATTCCTCCA...GGCTATAGCCCCTTCACAATATAGTATCCCTCTAATCACACACAGGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS-3UTR CAA 90 bp AAGGTGAAACGAGAATTAAATGATGTGCAAACACTCCACACCTGGAAAGCGATAGTATTTGATGCTTCCTaGGGCAATGGAAAAACTATG +
Preference number: 5 (lower is better)
Translates to: KVKRELNDVQTLHTWKAIVFDAS*GNGKTM
Trigger: CATAGTTTTTCCATTGCCCAAGGAAGCATCAAATAC...TATCGCTTTCCAGGTGTGGAGTGTTTGCACATCATTTAATTCTCGTTTCACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329293.4
CDS TCA 72 bp GAGCTCCCTGGGTCCAGCATCTGTTGCCCTCACCCTTaGCACATGCGGACCCTCCCCAGGCTAGTGGTTGCA +
Preference number: 6 (lower is better)
Translates to: ELPGSSICCPHP*HMRTLPRLVVA
Trigger: TGCAACCACTAGCCTGGGGAGGGTCCGCATGTGTCAAGGGTGAGGGCAACAGATGCTGGACCCAGGGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000530135.5
ENST00000534244.1
CDS CAA 72 bp AGAGCTCCCTGGGTCCAGCATCTGTTGCCCTCACCCTaGACACATGCGGACCCTCCCCAGGCTAGTGGTTGC +
Preference number: 6 (lower is better)
Translates to: RAPWVQHLLPSP*THADPPQASGC
Trigger: GCAACCACTAGCCTGGGGAGGGTCCGCATGTGTCAAGGGTGAGGGCAACAGATGCTGGACCCAGGGAGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000530135.5
ENST00000534244.1
CDS CCA 72 bp GACTCGAAAGCGCTGGTAGATGTAATGCACCATGGCTaGGTCCTGGGTACACTGCGGCGGGGGCAGAAAAGC +
Preference number: 6 (lower is better)
Translates to: DSKALVDVMHHG*VLGTLRRGQKS
Trigger: GCTTTTCTGCCCCCGCCGCAGTGTACCCAGGACCCAGCCATGGTGCATTACATCTACCAGCGCTTTCGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000528758.1
ENST00000530135.5
ENST00000534244.1
CDS CCA 72 bp CCAAGACTCGAAAGCGCTGGTAGATGTAATGCACCATaGCTGGGTCCTGGGTACACTGCGGCGGGGGCAGAA +
Preference number: 6 (lower is better)
Translates to: PRLESAGRCNAP*LGPGYTAAGAE
Trigger: TTCTGCCCCCGCCGCAGTGTACCCAGGACCCAGCCATGGTGCATTACATCTACCAGCGCTTTCGAGTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000528758.1
ENST00000530135.5
ENST00000534244.1
CDS CCA 72 bp CGAAGGGCCACCATCATCCTGTGGCAGAGAGCTCCCTaGGTCCAGCATCTGTTGCCCTCACCCTTGACACAT +
Preference number: 6 (lower is better)
Translates to: RRATIILWQRAP*VQHLLPSPLTH
Trigger: ATGTGTCAAGGGTGAGGGCAACAGATGCTGGACCCAGGGAGCTCTCTGCCACAGGATGATGGTGGCCCTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530135.5
CDS GCA 72 bp TGGCTCTTCTCAAGGATGTCTCAAGGGCTCCGGTGGTaGTCTCCTGCTCTATCCGCTGCTGTGGCAAATCCT +
Preference number: 6 (lower is better)
Translates to: WLFSRMSQGLRW*SPALSAAVANP
Trigger: AGGATTTGCCACAGCAGCGGATAGAGCAGGAGAGCACCACCGGAGCCCTTGAGACATCCTTGAGAAGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000528758.1
ENST00000534244.1
CDS CCA 72 bp CTGTGGCTCTTCTCAAGGATGTCTCAAGGGCTCCGGTaGTGCTCTCCTGCTCTATCCGCTGCTGTGGCAAAT +
Preference number: 6 (lower is better)
Translates to: LWLFSRMSQGLR*CSPALSAAVAN
Trigger: ATTTGCCACAGCAGCGGATAGAGCAGGAGAGCACCACCGGAGCCCTTGAGACATCCTTGAGAAGAGCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000528758.1
ENST00000534244.1
CDS CAA 90 bp CCGATACGTGAGCTCAGTTTGCCAGCTAGTGATCAAGTCCAGCTGTaGGCAAGTTGGTCCCTGAGGCCTTGTAGACTGACCTGTGGCAGA +
Preference number: 6 (lower is better)
Translates to: PIRELSLPASDQVQL*ASWSLRPCRLTCGR
Trigger: TCTGCCACAGGTCAGTCTACAAGGCCTCAGGGACCAACTTGCCAACAGCTGGACTTGATCACTAGCTGGCAAACTGAGCTCACGTATCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000528758.1
ENST00000534244.1
CDS GCA 72 bp TCAAGGGCTCCGGTGGTGCTCTCCTGCTCTATCCGCTaGTGTGGCAAATCCTCTAAAAACAGCGTTTTGCAC +
Preference number: 6 (lower is better)
Translates to: SRAPVVLSCSIR*CGKSSKNSVLH
Trigger: GTGCAAAACGCTGTTTTTAGAGGATTTGCCACAGCAGCGGATAGAGCAGGAGAGCACCACCGGAGCCCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000528758.1
ENST00000534244.1
CDS GCA 72 bp CTCAAGGATGTCTCAAGGGCTCCGGTGGTGCTCTCCTaGTCTATCCGCTGCTGTGGCAAATCCTCTAAAAAC +
Preference number: 6 (lower is better)
Translates to: LKDVSRAPVVLS*SIRCCGKSSKN
Trigger: GTTTTTAGAGGATTTGCCACAGCAGCGGATAGAGCAGGAGAGCACCACCGGAGCCCTTGAGACATCCTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000528758.1
ENST00000534244.1
CDS GCA 72 bp GCAATGCAGAAGCTCCTCGAAGGGCCACCATCATCCTaGAAAACACCAAGCAGGGCAGTCTCTTATGCTGTG +
Preference number: 6 (lower is better)
Translates to: AMQKLLEGPPSS*KTPSRAVSYAV
Trigger: CACAGCATAAGAGACTGCCCTGCTTGGTGTTTTGCAGGATGATGGTGGCCCTTCGAGGAGCTTCTGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000528758.1
ENST00000534244.1
CDS CCA 72 bp TTGCCAGCTAGTGATCAAGTCCAGCTGTTGGCAAGTTaGTCCCTGAGGCCTTGTAGACTGACCTGTGGCAGA +
Preference number: 6 (lower is better)
Translates to: LPASDQVQLLAS*SLRPCRLTCGR
Trigger: TCTGCCACAGGTCAGTCTACAAGGCCTCAGGGACCAACTTGCCAACAGCTGGACTTGATCACTAGCTGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000528758.1
ENST00000534244.1
CDS CAA 72 bp GAGCTCAGTTTGCCAGCTAGTGATCAAGTCCAGCTGTaGGCAAGTTGGTCCCTGAGGCCTTGTAGACTGACC +
Preference number: 6 (lower is better)
Translates to: ELSLPASDQVQL*ASWSLRPCRLT
Trigger: GGTCAGTCTACAAGGCCTCAGGGACCAACTTGCCAACAGCTGGACTTGATCACTAGCTGGCAAACTGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000528758.1
ENST00000534244.1
CDS CAA 90 bp GAGAGCAAAGTCCGCTTGTTATTCCACCCGATACGTGAGCTCAGTTaGCCAGCTAGTGATCAAGTCCAGCTGTTGGCAAGTTGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: ESKVRLLFHPIRELS*PASDQVQLLASWSL
Trigger: CAGGGACCAACTTGCCAACAGCTGGACTTGATCACTAGCTGGCAAACTGAGCTCACGTATCGGGTGGAATAACAAGCGGACTTTGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000528758.1
ENST00000534244.1
CDS CAA 90 bp GCACTCGTCAGCCTCTCGAAGGTATTGTATGTAGTCAATCTCCCGTaGGGCACGTTCAACTCTCAGTGCCAAGTTACCCACTGCACTCTT +
Preference number: 6 (lower is better)
Translates to: ALVSLSKVLYVVNLP*GTFNSQCQVTHCTL
Trigger: AAGAGTGCAGTGGGTAACTTGGCACTGAGAGTTGAACGTGCCCAACGGGAGATTGACTACATACAATACCTTCGAGAGGCTGACGAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000530135.5
CDS CAA 72 bp GTCCGCTTGTTATTCCACCCGATACGTGAGCTCAGTTaGCCAGCTAGTGATCAAGTCCAGCTGTTGGCAAGT +
Preference number: 6 (lower is better)
Translates to: VRLLFHPIRELS*PASDQVQLLAS
Trigger: ACTTGCCAACAGCTGGACTTGATCACTAGCTGGCAAACTGAGCTCACGTATCGGGTGGAATAACAAGCGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000528758.1
ENST00000534244.1
CDS CAA 90 bp TCCTGCTCTATCCGCTGCTGTGGCAAATCCTCTAAAAACAGCGTTTaGCACAGCAGAGAGCAAAGTCCGCTTGTTATTCCACCCGATACG +
Preference number: 6 (lower is better)
Translates to: SCSIRCCGKSSKNSV*HSREQSPLVIPPDT
Trigger: CGTATCGGGTGGAATAACAAGCGGACTTTGCTCTCTGCTGTGCAAAACGCTGTTTTTAGAGGATTTGCCACAGCAGCGGATAGAGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000528758.1
ENST00000534244.1
CDS GCA 72 bp GTAGTCAATCTCCCGTTGGGCACGTTCAACTCTCAGTaGCAAGTTACCCACTGCACTCTTGTACTCACTTGT +
Preference number: 6 (lower is better)
Translates to: VVNLPLGTFNSQ*QVTHCTLVLTC
Trigger: ACAAGTGAGTACAAGAGTGCAGTGGGTAACTTGGCACTGAGAGTTGAACGTGCCCAACGGGAGATTGACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000530135.5
CDS CAA 72 bp AGCCTCTCGAAGGTATTGTATGTAGTCAATCTCCCGTaGGGCACGTTCAACTCTCAGTGCCAAGTTACCCAC +
Preference number: 6 (lower is better)
Translates to: SLSKVLYVVNLP*GTFNSQCQVTH
Trigger: GTGGGTAACTTGGCACTGAGAGTTGAACGTGCCCAACGGGAGATTGACTACATACAATACCTTCGAGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000530135.5
CDS CAA 72 bp TCTTCAGCTTCTTGGAGCAACATTTCTGCCAGTGTCTaGTCCTCTGATTCGATGCACTCGTCAGCCTCTCGA +
Preference number: 6 (lower is better)
Translates to: SSASWSNISASV*SSDSMHSSASR
Trigger: TCGAGAGGCTGACGAGTGCATCGAATCAGAGGACAAGACACTGGCAGAAATGTTGCTCCAAGAAGCTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000530135.5
CDS GCA 72 bp TTGGGCACGTTCAACTCTCAGTGCCAAGTTACCCACTaGACTCTTGTACTCACTTGTGTAGGTCTGACATCT +
Preference number: 6 (lower is better)
Translates to: LGTFNSQCQVTH*TLVLTCVGLTS
Trigger: AGATGTCAGACCTACACAAGTGAGTACAAGAGTGCAGTGGGTAACTTGGCACTGAGAGTTGAACGTGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000530135.5
CDS CAA 90 bp AATCCTCTAAAAACAGCGTTTTGCACAGCAGAGAGCAAAGTCCGCTaGTTATTCCACCCGATACGTGAGCTCAGTTTGCCAGCTAGTGAT +
Preference number: 6 (lower is better)
Translates to: NPLKTAFCTAESKVR*LFHPIRELSLPASD
Trigger: ATCACTAGCTGGCAAACTGAGCTCACGTATCGGGTGGAATAACAAGCGGACTTTGCTCTCTGCTGTGCAAAACGCTGTTTTTAGAGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000528758.1
ENST00000534244.1
CDS TCA 72 bp GCACACACAATAGTGATTCACTGCAGTTCCCATCCCTaGGGGTTGGCTGTTGCCATTTCCAATTTAAGACTG +
Preference number: 6 (lower is better)
Translates to: AHTIVIHCSSHP*GLAVAISNLRL
Trigger: CAGTCTTAAATTGGAAATGGCAACAGCCAACCCTCAGGGATGGGAACTGCAGTGAATCACTATTGTGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528308.1
CDS GCA 72 bp GCAACATTTCTGCCAGTGTCTTGTCCTCTGATTCGATaGACTCGTCAGCCTCTCGAAGGTATTGTATGTAGT +
Preference number: 6 (lower is better)
Translates to: ATFLPVSCPLIR*TRQPLEGIVCS
Trigger: ACTACATACAATACCTTCGAGAGGCTGACGAGTGCATCGAATCAGAGGACAAGACACTGGCAGAAATGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000530135.5
CDS CAA 72 bp ATCCGCTGCTGTGGCAAATCCTCTAAAAACAGCGTTTaGCACAGCAGAGAGCAAAGTCCGCTTGTTATTCCA +
Preference number: 6 (lower is better)
Translates to: IRCCGKSSKNSV*HSREQSPLVIP
Trigger: TGGAATAACAAGCGGACTTTGCTCTCTGCTGTGCAAAACGCTGTTTTTAGAGGATTTGCCACAGCAGCGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000528758.1
ENST00000534244.1
CDS CAA 72 bp GAACTCTTGGAATTCTTGAATGTATGCCCTCGTTGCTaGGGTACATTTTTCCAGCCCTTGCTCCAAGACTCG +
Preference number: 6 (lower is better)
Translates to: ELLEFLNVCPRC*GTFFQPLLQDS
Trigger: CGAGTCTTGGAGCAAGGGCTGGAAAAATGTACCCAAGCAACGAGGGCATACATTCAAGAATTCCAAGAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329293.4
ENST00000528308.1
ENST00000530135.5
CDS CAA 72 bp GAACTCTTGGAATTCTTGAATGTATGCCCTCGTTGCTaGGGTACATTTTTCCAGCCCTCCAAGACTCGAAAG +
Preference number: 6 (lower is better)
Translates to: ELLEFLNVCPRC*GTFFQPSKTRK
Trigger: CTTTCGAGTCTTGGAGGGCTGGAAAAATGTACCCAAGCAACGAGGGCATACATTCAAGAATTCCAAGAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534244.1
CDS CAA 72 bp TTGAGAACTCTTGGAATTCTTGAATGTATGCCCTCGTaGCTTGGGTACATTTTTCCAGCCCTCCAAGACTCG +
Preference number: 6 (lower is better)
Translates to: LRTLGILECMPS*LGYIFPALQDS
Trigger: CGAGTCTTGGAGGGCTGGAAAAATGTACCCAAGCAACGAGGGCATACATTCAAGAATTCCAAGAGTTCTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534244.1
CDS TCA 72 bp AAAAGCACACCTCCAATTCTTACTCTCATTACTCTATaGTGCTCCCTGACTGCTCTGAGTCTGTGTGTTTCT +
Preference number: 6 (lower is better)
Translates to: KSTPPILTLITL*CSLTALSLCVS
Trigger: AGAAACACACAGACTCAGAGCAGTCAGGGAGCATCATAGAGTAATGAGAGTAAGAATTGGAGGTGTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528308.1
CDS CCA 72 bp TGTTTCTTGGTACATTTGCAGATGCTATCTACAGCCTaGGTACTGGATGTAGAATCCACCAAACTGCTACTT +
Preference number: 6 (lower is better)
Translates to: CFLVHLQMLSTA*VLDVESTKLLL
Trigger: AAGTAGCAGTTTGGTGGATTCTACATCCAGTACCCAGGCTGTAGATAGCATCTGCAAATGTACCAAGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528308.1
CDS CAA 90 bp ACTGTGTGTGAAAGAAAGAATGGCTTTGCGAGAATGGATTTCTCTTaGGACACCTGTTCTCTGTATAGCTTTCTCTCTCAGCAATGCACA +
Preference number: 6 (lower is better)
Translates to: TVCERKNGFARMDFS*DTCSLYSFLSQQCT
Trigger: TGTGCATTGCTGAGAGAGAAAGCTATACAGAGAACAGGTGTCCAAAGAGAAATCCATTCTCGCAAAGCCATTCTTTCTTTCACACACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528308.1
CDS CAA 72 bp GAAAGAAAGAATGGCTTTGCGAGAATGGATTTCTCTTaGGACACCTGTTCTCTGTATAGCTTTCTCTCTCAG +
Preference number: 6 (lower is better)
Translates to: ERKNGFARMDFS*DTCSLYSFLSQ
Trigger: CTGAGAGAGAAAGCTATACAGAGAACAGGTGTCCAAAGAGAAATCCATTCTCGCAAAGCCATTCTTTCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528308.1