RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFM3 (Homo sapiens)

Ensembl gene IDs: ENSG00000118733

Ensembl transcript IDs: ENST00000338858.9, ENST00000370103.9, ENST00000462354.5, ENST00000465523.5, ENST00000468901.1, ENST00000536598.1

Found 263 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AACCCACAGCACATCACTGGCTTGGGGTGTCTTTGGCTTCGATGGTaGTTGAATCTAATCCAGCCTTGCATCTCTATGGCAAAGGGATAC +
Preference number: 1 (lower is better)
Translates to: NPQHITGLGCLWLRW*LNLIQPCISMAKGY
Trigger: GTATCCCTTTGCCATAGAGATGCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAGCCAGTGATGTGCTGTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR CCA 90 bp AACAACCCACAGCACATCACTGGCTTGGGGTGTCTTTGGCTTCGATaGTGCTTGAATCTAATCCAGCCTTGCATCTCTATGGCAAAGGGA +
Preference number: 1 (lower is better)
Translates to: NNPQHITGLGCLWLR*CLNLIQPCISMAKG
Trigger: TCCCTTTGCCATAGAGATGCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAGCCAGTGATGTGCTGTGGGTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR CCA 90 bp ACATTTCCAAACAACCCACAGCACATCACTGGCTTGGGGTGTCTTTaGCTTCGATGGTGCTTGAATCTAATCCAGCCTTGCATCTCTATG +
Preference number: 1 (lower is better)
Translates to: TFPNNPQHITGLGCL*LRWCLNLIQPCISM
Trigger: CATAGAGATGCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAGCCAGTGATGTGCTGTGGGTTGTTTGGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR CCA 90 bp TGTCATCCAAGCACCAAATCGGGTTCCAGATGTCTTGACTGTAACTaGGCCTGTGATTTTCATCAGTTTGCCACATGCTTATTGCCAGAC +
Preference number: 1 (lower is better)
Translates to: CHPSTKSGSRCLDCN*ACDFHQFATCLLPD
Trigger: GTCTGGCAATAAGCATGTGGCAAACTGATGAAAATCACAGGCCCAGTTACAGTCAAGACATCTGGAACCCGATTTGGTGCTTGGATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR TCA 90 bp TTGAATCTAATCCAGCCTTGCATCTCTATGGCAAAGGGATACTGCTaGGTCTTAGGTTGTTTCGGCCAAAACTTAGGACAGAATTTGTAC +
Preference number: 1 (lower is better)
Translates to: LNLIQPCISMAKGYC*VLGCFGQNLGQNLY
Trigger: GTACAAATTCTGTCCTAAGTTTTGGCCGAAACAACCTAAGACTCAGCAGTATCCCTTTGCCATAGAGATGCAAGGCTGGATTAGATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR CCA 90 bp ATTGGTTATGGAAGGGAATGTCTGTGTACTCATATGTGGAGGTTTTaGTGGAATAGGAATAATACACCTTGGCTCCAGTTAAGTGGGAGT +
Preference number: 1 (lower is better)
Translates to: IGYGRECLCTHMWRF*WNRNNTPWLQLSGS
Trigger: ACTCCCACTTAACTGGAGCCAAGGTGTATTATTCCTATTCCACCAAAACCTCCACATATGAGTACACAGACATTCCCTTCCATAACCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR CCA 90 bp AATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATaGGTTGCATTCAGTGGAGTGAACAGAGTAACTCAGTTGTATGAA +
Preference number: 1 (lower is better)
Translates to: NPIFGIQMHLVQETI*VAFSGVNRVTQLYE
Trigger: TTCATACAACTGAGTTACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
3UTR TCA 90 bp AAGGGGTCTTATAGAGTTTATCACAAATCACACTGTTTAAATCAATaGAAACATGTCACATTTGCCTATGTGTCATCCTCTGTCTTGATG +
Preference number: 1 (lower is better)
Translates to: KGSYRVYHKSHCLNQ*KHVTFAYVSSSVLM
Trigger: CATCAAGACAGAGGATGACACATAGGCAAATGTGACATGTTTTCATTGATTTAAACAGTGTGATTTGTGATAAACTCTATAAGACCCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR GCA 90 bp TTATCACAAATCACACTGTTTAAATCAATGAAAACATGTCACATTTaGCTATGTGTCATCCTCTGTCTTGATGATATGGAAAAGGGTGAC +
Preference number: 1 (lower is better)
Translates to: LSQITLFKSMKTCHI*LCVILCLDDMEKGD
Trigger: GTCACCCTTTTCCATATCATCAAGACAGAGGATGACACATAGGCAAATGTGACATGTTTTCATTGATTTAAACAGTGTGATTTGTGATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR CCA 90 bp TTCTCTTGGGGTAGCCAGTGCTCCAGCTCTTCATCACCTCCAAGGTATCTTGGTCCCACAGCACATCACTaGCTTGGGGTGTCTTTGGCT +
Preference number: 2 (lower is better)
Translates to: FSWGSQCSSSSSPPRYLGPTAHH*LGVSLA
Trigger: AGCCAAAGACACCCCAAGCCAGTGATGTGCTGTGGG...ACCAAGATACCTTGGAGGTGATGAAGAGCTGGAGCACTGGCTACCCCAAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR CCA 90 bp TTCTCTTGGGGTAGCCAGTGCTCCAGCTCTTCATCACCTCCAAGGTATCTTGGTTACTCCAGGCTTCGTTaGGCAAGCACTCTCCCCATA +
Preference number: 2 (lower is better)
Translates to: FSWGSQCSSSSSPPRYLGYSRLR*ASTLPI
Trigger: TATGGGGAGAGTGCTTGCCCAACGAAGCCTGGAGTA...ACCAAGATACCTTGGAGGTGATGAAGAGCTGGAGCACTGGCTACCCCAAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR CAA 90 bp CCACAGCACATCACTGGCTTGGGGTGTCTTTGGCTTCGATGGTGCTaGAATCTAATCCAGCCTTGCATCTCTATGGCAAAGGGATACTGC +
Preference number: 2 (lower is better)
Translates to: PQHITGLGCLWLRWC*NLIQPCISMAKGYC
Trigger: GCAGTATCCCTTTGCCATAGAGATGCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAGCCAGTGATGTGCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR TCA 90 bp CTTGGGGTGTCTTTGGCTTCGATGGTGCTTGAATCTAATCCAGCCTTGCATCTCCTGAGAATACAAAGGTaGACAGGGAGGCAAGTCGCG +
Preference number: 2 (lower is better)
Translates to: LGVSLASMVLESNPALHLLRIQR*TGRQVA
Trigger: CGCGACTTGCCTCCCTGTTCACCTTTGTATTCTCAG...GAGATGCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR CCA 90 bp GAAAACCAGCATACTCCAGGCTTCGTTGGGCAAGCACTCTCCCCATATCAAAGCAGCACATCACTGGCTTaGGGTGTCTTTGGCTTCGAT +
Preference number: 2 (lower is better)
Translates to: ENQHTPGFVGQALSPYQSSTSLA*GVFGFD
Trigger: ATCGAAGCCAAAGACACCCCAAGCCAGTGATGTGCT...GCTTTGATATGGGGAGAGTGCTTGCCCAACGAAGCCTGGAGTATGCTGGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR CCA 90 bp TTCTCTTGGGGTAGCCAGTGCTCCAGCTCTTCATCACCTCCAAGGTATCTTGGTAGCCTTGCATCTCTATaGCAAAGGGATACTGCTGAG +
Preference number: 2 (lower is better)
Translates to: FSWGSQCSSSSSPPRYLGSLASL*QRDTAE
Trigger: CTCAGCAGTATCCCTTTGCCATAGAGATGCAAGGCT...ACCAAGATACCTTGGAGGTGATGAAGAGCTGGAGCACTGGCTACCCCAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR TCA 90 bp TTCTCTTGGGGTAGCCAGTGCTCCAGCTCTTCATCACCTCCAAGGTATCTTGGTAAGGTTGTATGTCCTTaGTTCAGCCCCACTGACAAA +
Preference number: 2 (lower is better)
Translates to: FSWGSQCSSSSSPPRYLGKVVCP*FSPTDK
Trigger: TTTGTCAGTGGGGCTGAATCAAGGACATACAACCTT...ACCAAGATACCTTGGAGGTGATGAAGAGCTGGAGCACTGGCTACCCCAAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR GCA 90 bp TTCTCTTGGGGTAGCCAGTGCTCCAGCTCTTCATCACCTCCAAGGTATCTTGGTCTTTGGCTTCGATGGTaGTTGAATCTAATCCAGCCT +
Preference number: 2 (lower is better)
Translates to: FSWGSQCSSSSSPPRYLGLWLRW*LNLIQP
Trigger: AGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAG...ACCAAGATACCTTGGAGGTGATGAAGAGCTGGAGCACTGGCTACCCCAAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR CAA 90 bp GACATTTCCAAACAACCCACAGCACATCACTGGCTTGGGGTGTCTTaGGCTTCGATGGTGCTTGAATCTAATCCAGCCTTGCATCTCTAT +
Preference number: 2 (lower is better)
Translates to: DISKQPTAHHWLGVS*ASMVLESNPALHLY
Trigger: ATAGAGATGCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAGCCAGTGATGTGCTGTGGGTTGTTTGGAAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR CCA 90 bp TTCTCTTGGGGTAGCCAGTGCTCCAGCTCTTCATCACCTCCAAGGTATCTTGGTTGTCTTGACTGTAACTaGGCCTGTGATTTTCATCAG +
Preference number: 2 (lower is better)
Translates to: FSWGSQCSSSSSPPRYLGCLDCN*ACDFHQ
Trigger: CTGATGAAAATCACAGGCCCAGTTACAGTCAAGACA...ACCAAGATACCTTGGAGGTGATGAAGAGCTGGAGCACTGGCTACCCCAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR CAA 90 bp CTTGGGGTGTCTTTGGCTTCGATGGTGCTTGAATCTAATCCAGCCTaGCATCTCTATGGCAAAGGGATACTGCTGAGTCTTAGGTTGTTT +
Preference number: 2 (lower is better)
Translates to: LGVSLASMVLESNPA*HLYGKGILLSLRLF
Trigger: AAACAACCTAAGACTCAGCAGTATCCCTTTGCCATAGAGATGCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR GCA 90 bp TTCTCTTGGGGTAGCCAGTGCTCCAGCTCTTCATCACCTCCAAGGTATCTTGGTGATGACAATATTGCCTaGATTCTGGTTAGTTGCATA +
Preference number: 2 (lower is better)
Translates to: FSWGSQCSSSSSPPRYLGDDNIA*ILVSCI
Trigger: TATGCAACTAACCAGAATGCAGGCAATATTGTCATC...ACCAAGATACCTTGGAGGTGATGAAGAGCTGGAGCACTGGCTACCCCAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR TCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGGCAAAGGGATACTGCTaGGTCTTAGGTTGTTTCGGC +
Preference number: 2 (lower is better)
Translates to: KMLARDLKMTVQHRIRELAKGYC*VLGCFG
Trigger: GCCGAAACAACCTAAGACTCAGCAGTATCCCTTTGC...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR CAA 90 bp AGCTCGATCTCTTGCATTGTAGTCAAGCATGGATATGTGAAAGTATaGGTTATGGAAGGGAATGTCTGTGTACTCATATGTGGAGGTTTT +
Preference number: 2 (lower is better)
Translates to: SSISCIVVKHGYVKV*VMEGNVCVLICGGF
Trigger: AAAACCTCCACATATGAGTACACAGACATTCCCTTCCATAACCAATACTTTCACATATCCATGCTTGACTACAATGCAAGAGATCGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR TCA 90 bp AGGGAATGTCTGTGTACTCATATGTGGAGGTTTTGGTGGAATAGGAATAATACATGCCAGACTGAAGCATaGTTTGTACAAAGCAAGAAG +
Preference number: 2 (lower is better)
Translates to: RECLCTHMWRFWWNRNNTCQTEA*FVQSKK
Trigger: CTTCTTGCTTTGTACAAATCATGCTTCAGTCTGGCA...TGTATTATTCCTATTCCACCAAAACCTCCACATATGAGTACACAGACATTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR TCA 90 bp CAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTGCTTGTTAAAATAGAGTaGGCCATTGTAGACAACATG +
Preference number: 2 (lower is better)
Translates to: QLFITSKVSWLSWLMTILLVKIE*AIVDNM
Trigger: CATGTTGTCTACAATGGCTCACTCTATTTTAACAAG...CAATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR CAA 90 bp TTCTCTTGGGGTAGCCAGTGCTCCAGCTCTTCATCACCTCCAAGGTATCTTGGTTGGCTTGGGGTGTCTTaGGCTTCGATGGTGCTTGAA +
Preference number: 3 (lower is better)
Translates to: FSWGSQCSSSSSPPRYLGWLGVS*ASMVLE
Trigger: TTCAAGCACCATCGAAGCCAAAGACACCCCAAGCCA...ACCAAGATACCTTGGAGGTGATGAAGAGCTGGAGCACTGGCTACCCCAAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR CAA 90 bp GAAAACCAGCATACTCCAGGCTTCGTTGGGCAAGCACTCTCCCCATATCAAAGCTGGCTTCGATGGTGCTaGAATCTAATCCAGCCTTGC +
Preference number: 3 (lower is better)
Translates to: ENQHTPGFVGQALSPYQSWLRWC*NLIQPC
Trigger: GCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCA...GCTTTGATATGGGGAGAGTGCTTGCCCAACGAAGCCTGGAGTATGCTGGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR CCA 72 bp AACAACCCACAGCACATCACTGGCTTGGGGTGTCTTTaGCTTCGATGGTGCTTGAATCTAATCCAGCCTTGC +
Preference number: 3 (lower is better)
Translates to: NNPQHITGLGCL*LRWCLNLIQPC
Trigger: GCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAGCCAGTGATGTGCTGTGGGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR GCA 72 bp CACATCACTGGCTTGGGGTGTCTTTGGCTTCGATGGTaGTTGAATCTAATCCAGCCTTGCATCTCTATGGCA +
Preference number: 3 (lower is better)
Translates to: HITGLGCLWLRW*LNLIQPCISMA
Trigger: TGCCATAGAGATGCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAGCCAGTGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR CCA 72 bp CAGCACATCACTGGCTTGGGGTGTCTTTGGCTTCGATaGTGCTTGAATCTAATCCAGCCTTGCATCTCTATG +
Preference number: 3 (lower is better)
Translates to: QHITGLGCLWLR*CLNLIQPCISM
Trigger: CATAGAGATGCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAGCCAGTGATGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR CAA 90 bp CTTGGGGTGTCTTTGGCTTCGATGGTGCTTGAATCTAATCCAGCCTTGCATCTCCTGCTGAGTCTTAGGTaGTTTCGGCCAAAACTTAGG +
Preference number: 3 (lower is better)
Translates to: LGVSLASMVLESNPALHLLLSLR*FRPKLR
Trigger: CCTAAGTTTTGGCCGAAACAACCTAAGACTCAGCAG...GAGATGCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR TCA 72 bp ATCCAGCCTTGCATCTCTATGGCAAAGGGATACTGCTaGGTCTTAGGTTGTTTCGGCCAAAACTTAGGACAG +
Preference number: 3 (lower is better)
Translates to: IQPCISMAKGYC*VLGCFGQNLGQ
Trigger: CTGTCCTAAGTTTTGGCCGAAACAACCTAAGACTCAGCAGTATCCCTTTGCCATAGAGATGCAAGGCTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR CAA 90 bp AGGGAATGTCTGTGTACTCATATGTGGAGGTTTTGGTGGAATAGGAATAATACACGGGTTCCAGATGTCTaGACTGTAACTGGGCCTGTG +
Preference number: 3 (lower is better)
Translates to: RECLCTHMWRFWWNRNNTRVPDV*TVTGPV
Trigger: CACAGGCCCAGTTACAGTCAAGACATCTGGAACCCG...TGTATTATTCCTATTCCACCAAAACCTCCACATATGAGTACACAGACATTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR CCA 72 bp AGCACCAAATCGGGTTCCAGATGTCTTGACTGTAACTaGGCCTGTGATTTTCATCAGTTTGCCACATGCTTA +
Preference number: 3 (lower is better)
Translates to: STKSGSRCLDCN*ACDFHQFATCL
Trigger: TAAGCATGTGGCAAACTGATGAAAATCACAGGCCCAGTTACAGTCAAGACATCTGGAACCCGATTTGGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR CAA 90 bp CCAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTTTAGTTCCTGCCCACTaGAAAGGAAGGTTGTATGTC +
Preference number: 3 (lower is better)
Translates to: PALHHLQGILVKLADDNILVPAH*KGRLYV
Trigger: GACATACAACCTTCCTTTCAAGTGGGCAGGAACTAA...AATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR CCA 72 bp TTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATaGGTTGCATTCAGTGGAGTGAACAGAGTAACTCAG +
Preference number: 3 (lower is better)
Translates to: FGIQMHLVQETI*VAFSGVNRVTQ
Trigger: CTGAGTTACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
3UTR CCA 72 bp GGAAGGGAATGTCTGTGTACTCATATGTGGAGGTTTTaGTGGAATAGGAATAATACACCTTGGCTCCAGTTA +
Preference number: 3 (lower is better)
Translates to: GRECLCTHMWRF*WNRNNTPWLQL
Trigger: TAACTGGAGCCAAGGTGTATTATTCCTATTCCACCAAAACCTCCACATATGAGTACACAGACATTCCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR CCA 72 bp AGGGAATGTCTGTGTACTCATATGTGGAGGTTTTGGTaGAATAGGAATAATACACCTTGGCTCCAGTTAAGT +
Preference number: 3 (lower is better)
Translates to: RECLCTHMWRFW*NRNNTPWLQLS
Trigger: ACTTAACTGGAGCCAAGGTGTATTATTCCTATTCCACCAAAACCTCCACATATGAGTACACAGACATTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR CAA 90 bp CAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTGAACTTAGGACAGAATTaGTACCGGAGGTTAAAAGCT +
Preference number: 3 (lower is better)
Translates to: QLFITSKVSWLSWLMTILNLGQN*YRRLKA
Trigger: AGCTTTTAACCTCCGGTACAAATTCTGTCCTAAGTT...CAATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR CAA 90 bp AGGGAATGTCTGTGTACTCATATGTGGAGGTTTTGGTGGAATAGGAATAATACACACTTGAAAGGAAGGTaGTATGTCCTTGATTCAGCC +
Preference number: 3 (lower is better)
Translates to: RECLCTHMWRFWWNRNNTHLKGR*YVLDSA
Trigger: GGCTGAATCAAGGACATACAACCTTCCTTTCAAGTG...TGTATTATTCCTATTCCACCAAAACCTCCACATATGAGTACACAGACATTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR CAA 90 bp AGGGAATGTCTGTGTACTCATATGTGGAGGTTTTGGTGGAATAGGAATAATACATGGCTGATGACAATATaGCCTGCATTCTGGTTAGTT +
Preference number: 3 (lower is better)
Translates to: RECLCTHMWRFWWNRNNTWLMTI*PAFWLV
Trigger: AACTAACCAGAATGCAGGCAATATTGTCATCAGCCA...TGTATTATTCCTATTCCACCAAAACCTCCACATATGAGTACACAGACATTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR CCA 72 bp CATAGAGAGCTCGATCTCTTGCATTGTAGTCAAGCATaGATATGTGAAAGTATTGGTTATGGAAGGGAATGT +
Preference number: 3 (lower is better)
Translates to: HRELDLLHCSQA*ICESIGYGREC
Trigger: ACATTCCCTTCCATAACCAATACTTTCACATATCCATGCTTGACTACAATGCAAGAGATCGAGCTCTCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR-3UTR CAA 90 bp AGGGAATGTCTGTGTACTCATATGTGGAGGTTTTGGTGGAATAGGAATAATACAAGACTGAAGCATGATTaGTACAAAGCAAGAAGACAC +
Preference number: 3 (lower is better)
Translates to: RECLCTHMWRFWWNRNNTRLKHD*YKARRH
Trigger: GTGTCTTCTTGCTTTGTACAAATCATGCTTCAGTCT...TGTATTATTCCTATTCCACCAAAACCTCCACATATGAGTACACAGACATTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR GCA 72 bp GTAGAGTCAACTCAAATCCAATATTTGGAATCCAGATaGACCTTGTGCAAGAAACTATATGGGTTGCATTCA +
Preference number: 3 (lower is better)
Translates to: VESTQIQYLESR*TLCKKLYGLHS
Trigger: TGAATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGATTTGAGTTGACTCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
3UTR-3UTR CAA 90 bp AGGGAATGTCTGTGTACTCATATGTGGAGGTTTTGGTGGAATAGGAATAATACAATGTACCAGACTCTGTaGTTTTTCTCAGATGCTAAA +
Preference number: 3 (lower is better)
Translates to: RECLCTHMWRFWWNRNNTMYQTL*FFSDAK
Trigger: TTTAGCATCTGAGAAAAACAACAGAGTCTGGTACAT...TGTATTATTCCTATTCCACCAAAACCTCCACATATGAGTACACAGACATTCCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp TTCTCTTGGGGTAGCCAGTGCTCCAGCTCTTCATCACCTCCAAGGTATCTTGGTATCAGGATCCTGAGCTaGGCTGTACACCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: FSWGSQCSSSSSPPRYLGIRILS*AVHLPP
Trigger: GGGTGGCAGGTGTACAGCTCAGCTCAGGATCCTGAT...ACCAAGATACCTTGGAGGTGATGAAGAGCTGGAGCACTGGCTACCCCAAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CCA 90 bp CTTGGGGTGTCTTTGGCTTCGATGGTGCTTGAATCTAATCCAGCCTTGCATCTCCCCCTGCACTTCTCTTaGGGTAGCCAGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LGVSLASMVLESNPALHLPLHFS*GSQCSS
Trigger: GCTGGAGCACTGGCTACCCCAAGAGAAGTGCAGGGG...GAGATGCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CCA 90 bp TTCTCTTGGGGTAGCCAGTGCTCCAGCTCTTCATCACCTCCAAGGTATCTTGGTGAAGTTGCCTGCTTTTaGCATCCCGGGAACACAGGT +
Preference number: 4 (lower is better)
Translates to: FSWGSQCSSSSSPPRYLGEVACF*HPGNTG
Trigger: ACCTGTGTTCCCGGGATGCCAAAAGCAGGCAACTTC...ACCAAGATACCTTGGAGGTGATGAAGAGCTGGAGCACTGGCTACCCCAAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR GCA 90 bp CTTGGGGTGTCTTTGGCTTCGATGGTGCTTGAATCTAATCCAGCCTTGCATCTCAGTAGTTGGCGAAGTTaGCTGCTTTTGGCATCCCGG +
Preference number: 4 (lower is better)
Translates to: LGVSLASMVLESNPALHLSSWRS*LLLASR
Trigger: CCGGGATGCCAAAAGCAGGCAACTTCGCCAACTACT...GAGATGCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp ATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTACGCCCATCAGGATCCTaGGCTGAGCTGTACACCTGC +
Preference number: 4 (lower is better)
Translates to: MHLVQETIWVAFSGVNRVRPSGS*AELYTC
Trigger: GCAGGTGTACAGCTCAGCTCAGGATCCTGATGGGCG...TACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
3UTR CAA 72 bp AAACAACCCACAGCACATCACTGGCTTGGGGTGTCTTaGGCTTCGATGGTGCTTGAATCTAATCCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: KQPTAHHWLGVS*ASMVLESNPAL
Trigger: CAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAGCCAGTGATGTGCTGTGGGTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp ATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAATCAGGATCCTGAGCTaGGCTGTACACCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: MHLVQETIWVAFSGVNRVIRILS*AVHLPP
Trigger: GGGTGGCAGGTGTACAGCTCAGCTCAGGATCCTGAT...TACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
3UTR CAA 72 bp ATCACTGGCTTGGGGTGTCTTTGGCTTCGATGGTGCTaGAATCTAATCCAGCCTTGCATCTCTATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: ITGLGCLWLRWC*NLIQPCISMAK
Trigger: CTTTGCCATAGAGATGCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAGCCAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp CTTGGGGTGTCTTTGGCTTCGATGGTGCTTGAATCTAATCCAGCCTTGCATCTCAAGGTTGTATGTCCTTaGTTCAGCCCCACTGACAAA +
Preference number: 4 (lower is better)
Translates to: LGVSLASMVLESNPALHLKVVCP*FSPTDK
Trigger: TTTGTCAGTGGGGCTGAATCAAGGACATACAACCTT...GAGATGCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR GCA 90 bp CCAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTGTTGGCGAAGTTGCCTaGTTTTGGCATCCCGGGAAC +
Preference number: 4 (lower is better)
Translates to: PALHHLQGILVKLADDNIVGEVA*FWHPGN
Trigger: GTTCCCGGGATGCCAAAAGCAGGCAACTTCGCCAAC...AATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR GCA 90 bp GTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAACTCAGTTGAGGCTCTCCACTCACTaGAGAGACCTTTCCCTCGTC +
Preference number: 4 (lower is better)
Translates to: VQETIWVAFSGVNRVTQLRLSTH*RDLSLV
Trigger: GACGAGGGAAAGGTCTCTGCAGTGAGTGGAGAGCCT...CAACTGAGTTACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR GCA 90 bp CTTGGGGTGTCTTTGGCTTCGATGGTGCTTGAATCTAATCCAGCCTTGCATCTCCTTTGGCTTCGATGGTaGTTGAATCTAATCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LGVSLASMVLESNPALHLLWLRW*LNLIQP
Trigger: AGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAG...GAGATGCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CCA 90 bp CAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTGCCCACAGCACATCACTaGCTTGGGGTGTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: QLFITSKVSWLSWLMTILPTAHH*LGVSLA
Trigger: AGCCAAAGACACCCCAAGCCAGTGATGTGCTGTGGG...CAATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp AGGTTGTTTCGGCCAAAACTTAGGACAGAATTTGTACCGGAGGTTAAAAGCTTCCCTCCTGAATACCAGTaGGGACAGCAGACAGATTCC +
Preference number: 4 (lower is better)
Translates to: RLFRPKLRTEFVPEVKSFPPEYQ*GQQTDS
Trigger: GGAATCTGTCTGCTGTCCTCACTGGTATTCAGGAGG...GAAGCTTTTAACCTCCGGTACAAATTCTGTCCTAAGTTTTGGCCGAAACAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp ATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATACAGCAGCAGGAGGTTaGGAAGGTTGGACGTCGCCT +
Preference number: 4 (lower is better)
Translates to: IQYLESRCTLCKKLYGLHTAAGG*EGWTSP
Trigger: AGGCGACGTCCAACCTTCTCAACCTCCTGCTGCTGT...ATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR TCA 90 bp AGGTTGTTTCGGCCAAAACTTAGGACAGAATTTGTACCGGAGGTTAAAAGCTTCCTGAGAATACAAAGGTaGACAGGGAGGCAAGTCGCG +
Preference number: 4 (lower is better)
Translates to: RLFRPKLRTEFVPEVKSFLRIQR*TGRQVA
Trigger: CGCGACTTGCCTCCCTGTTCACCTTTGTATTCTCAG...GAAGCTTTTAACCTCCGGTACAAATTCTGTCCTAAGTTTTGGCCGAAACAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp TTCTCTTGGGGTAGCCAGTGCTCCAGCTCTTCATCACCTCCAAGGTATCTTGGTCCGATGTTGATTAGTTaGAACCTGAACAAGAACTGT +
Preference number: 4 (lower is better)
Translates to: FSWGSQCSSSSSPPRYLGPMLIS*NLNKNC
Trigger: ACAGTTCTTGTTCAGGTTTCAACTAATCAACATCGG...ACCAAGATACCTTGGAGGTGATGAAGAGCTGGAGCACTGGCTACCCCAAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR GCA 90 bp GTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAACTCAGTTGAGTAGTTGGCGAAGTTaGCTGCTTTTGGCATCCCGG +
Preference number: 4 (lower is better)
Translates to: VQETIWVAFSGVNRVTQLSSWRS*LLLASR
Trigger: CCGGGATGCCAAAAGCAGGCAACTTCGCCAACTACT...CAACTGAGTTACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR GCA 90 bp CCAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTTCTTGGGGTAGCCAGTaGTCCAGCTCTTCATCACCT +
Preference number: 4 (lower is better)
Translates to: PALHHLQGILVKLADDNISWGSQ*SSSSSP
Trigger: AGGTGATGAAGAGCTGGAGCACTGGCTACCCCAAGA...AATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CCA 90 bp AGGTTGTTTCGGCCAAAACTTAGGACAGAATTTGTACCGGAGGTTAAAAGCTTCTACTCCAGGCTTCGTTaGGCAAGCACTCTCCCCATA +
Preference number: 4 (lower is better)
Translates to: RLFRPKLRTEFVPEVKSFYSRLR*ASTLPI
Trigger: TATGGGGAGAGTGCTTGCCCAACGAAGCCTGGAGTA...GAAGCTTTTAACCTCCGGTACAAATTCTGTCCTAAGTTTTGGCCGAAACAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CCA 90 bp AGTCAACTCAAATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATCCCCTGCACTTCTCTTaGGGTAGCCAGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SQLKSNIWNPDAPCARNYPLHFS*GSQCSS
Trigger: GCTGGAGCACTGGCTACCCCAAGAGAAGTGCAGGGG...ATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGATTTGAGTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR TCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGCGCCCATCAGGATCCTaGGCTGAGCTGTACACCTGC +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELRPSGS*AELYTC
Trigger: GCAGGTGTACAGCTCAGCTCAGGATCCTGATGGGCG...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR TCA 90 bp GTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAACTCAGTTGGCACCAATTTCCTCCTaGATACCAGTGAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: VQETIWVAFSGVNRVTQLAPISS*IPVRTA
Trigger: TGCTGTCCTCACTGGTATTCAGGAGGAAATTGGTGC...CAACTGAGTTACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR TCA 90 bp GTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAACTCAGTTGGTGTCCCACAGATCATaGAAGATTCCCCTGCACTTC +
Preference number: 4 (lower is better)
Translates to: VQETIWVAFSGVNRVTQLVSHRS*KIPLHF
Trigger: GAAGTGCAGGGGAATCTTTCATGATCTGTGGGACAC...CAACTGAGTTACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR TCA 90 bp TTTTGTACCAGAACTATTCTAGGTGCTGAGAATACAAAGGTGAACAGGGAGGCAGTGTCCCACAGATCATaGAAGATTCCCCTGCACTTC +
Preference number: 4 (lower is better)
Translates to: FCTRTILGAENTKVNREAVSHRS*KIPLHF
Trigger: GAAGTGCAGGGGAATCTTTCATGATCTGTGGGACAC...TGCCTCCCTGTTCACCTTTGTATTCTCAGCACCTAGAATAGTTCTGGTACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp TTCTCTTGGGGTAGCCAGTGCTCCAGCTCTTCATCACCTCCAAGGTATCTTGGTTCAAGCATGGATATGTaGAAGTATTGGTTATGGAAG +
Preference number: 4 (lower is better)
Translates to: FSWGSQCSSSSSPPRYLGSSMDM*KYWLWK
Trigger: CTTCCATAACCAATACTTTCACATATCCATGCTTGA...ACCAAGATACCTTGGAGGTGATGAAGAGCTGGAGCACTGGCTACCCCAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp CCAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTGCAAAGGGATACTGCTaGGTCTTAGGTTGTTTCGGC +
Preference number: 4 (lower is better)
Translates to: PALHHLQGILVKLADDNIAKGYC*VLGCFG
Trigger: GCCGAAACAACCTAAGACTCAGCAGTATCCCTTTGC...AATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR GCA 90 bp CCAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTCAACAACTGTGCAAATaGACCGCCCATCAGGATCCT +
Preference number: 4 (lower is better)
Translates to: PALHHLQGILVKLADDNIQQLCK*TAHQDP
Trigger: AGGATCCTGATGGGCGGTGCATTTGCACAGTTGTTG...AATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR GCA 90 bp CTTGGGGTGTCTTTGGCTTCGATGGTGCTTGAATCTAATCCAGCCTTGCATCTCAATCTGCCGAAATTTTaGCTTCAGCCCTTTCATTTG +
Preference number: 4 (lower is better)
Translates to: LGVSLASMVLESNPALHLNLPKF*LQPFHL
Trigger: CAAATGAAAGGGCTGAAGGCAAAATTTCGGCAGATT...GAGATGCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR GCA 90 bp CCAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTTGCATTCTGGTTAGTTaGATACACAGCCCACAGCCC +
Preference number: 4 (lower is better)
Translates to: PALHHLQGILVKLADDNICILVS*IHSPQP
Trigger: GGGCTGTGGGCTGTGTATGCAACTAACCAGAATGCA...AATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR GCA 90 bp GTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAACTCAGTTGCATGAAAGATTCCCCTaGACTTCTCTTGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: VQETIWVAFSGVNRVTQLHERFP*TSLGVA
Trigger: GGCTACCCCAAGAGAAGTGCAGGGGAATCTTTCATG...CAACTGAGTTACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR GCA 90 bp CAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTGCATGAAAGATTCCCCTaGACTTCTCTTGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: QLFITSKVSWLSWLMTILHERFP*TSLGVA
Trigger: GGCTACCCCAAGAGAAGTGCAGGGGAATCTTTCATG...CAATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGCCCCTGCACTTCTCTTaGGGTAGCCAGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELPLHFS*GSQCSS
Trigger: GCTGGAGCACTGGCTACCCCAAGAGAAGTGCAGGGG...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CCA 90 bp ATGGTGCTTGAATCTAATCCAGCCTTGCATCTCTATGGCAAAGGGATACTGCTGTTGGCTCCAGTTAAGTaGGAGTTGGTGACATACAGT +
Preference number: 4 (lower is better)
Translates to: MVLESNPALHLYGKGILLLAPVK*ELVTYS
Trigger: ACTGTATGTCACCAACTCCCACTTAACTGGAGCCAA...CAGCAGTATCCCTTTGCCATAGAGATGCAAGGCTGGATTAGATTCAAGCACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CCA 90 bp ATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAACATTGAACAGCACCTaGTGGCCATTGTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: MHLVQETIWVAFSGVNRVTLNST*WPLFQA
Trigger: TGCCTGGAACAATGGCCACCAGGTGCTGTTCAATGT...TACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CCA 90 bp AGGTTGTTTCGGCCAAAACTTAGGACAGAATTTGTACCGGAGGTTAAAAGCTTCAGCACATCACTGGCTTaGGGTGTCTTTGGCTTCGAT +
Preference number: 4 (lower is better)
Translates to: RLFRPKLRTEFVPEVKSFSTSLA*GVFGFD
Trigger: ATCGAAGCCAAAGACACCCCAAGCCAGTGATGTGCT...GAAGCTTTTAACCTCCGGTACAAATTCTGTCCTAAGTTTTGGCCGAAACAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR CAA 72 bp TCTTTGGCTTCGATGGTGCTTGAATCTAATCCAGCCTaGCATCTCTATGGCAAAGGGATACTGCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: SLASMVLESNPA*HLYGKGILLSL
Trigger: AAGACTCAGCAGTATCCCTTTGCCATAGAGATGCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536598.1
3UTR CAA 72 bp ACAACATGGTTAGTTCCTGCCCACTTGAAAGGAAGGTaGTATGTCCTTGATTCAGCCCCACTGACAAAGTCT +
Preference number: 4 (lower is better)
Translates to: TTWLVPAHLKGR*YVLDSAPLTKS
Trigger: AGACTTTGTCAGTGGGGCTGAATCAAGGACATACAACCTTCCTTTCAAGTGGGCAGGAACTAACCATGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGATCAGGATCCTGAGCTaGGCTGTACACCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELIRILS*AVHLPP
Trigger: GGGTGGCAGGTGTACAGCTCAGCTCAGGATCCTGAT...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR TCA 90 bp GTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAACTCAGTTGGACTGGGACATGTTCTaGACCTTTTCCAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: VQETIWVAFSGVNRVTQLDWDMF*TFSSSW
Trigger: CCAACTACTGGAAAAGGTTCAGAACATGTCCCAGTC...CAACTGAGTTACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR TCA 90 bp TTTTGTACCAGAACTATTCTAGGTGCTGAGAATACAAAGGTGAACAGGGAGGCAGACTGGGACATGTTCTaGACCTTTTCCAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: FCTRTILGAENTKVNREADWDMF*TFSSSW
Trigger: CCAACTACTGGAAAAGGTTCAGAACATGTCCCAGTC...TGCCTCCCTGTTCACCTTTGTATTCTCAGCACCTAGAATAGTTCTGGTACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp CTTGGGGTGTCTTTGGCTTCGATGGTGCTTGAATCTAATCCAGCCTTGCATCTCTTCTCTTTCAACTCCTaGAAATGCTTGGTCATAAGT +
Preference number: 4 (lower is better)
Translates to: LGVSLASMVLESNPALHLFSFNS*KCLVIS
Trigger: ACTTATGACCAAGCATTTTCAGGAGTTGAAAGAGAA...GAGATGCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp CAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTGTTAAGTGGGAGTTGGTaGCATACAGTGTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: QLFITSKVSWLSWLMTILLSGSW*HTVSHR
Trigger: TCTGTGGGACACTGTATGTCACCAACTCCCACTTAA...CAATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp AGTCAACTCAAATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATACGTCGCCTGCATTCTaGTCTGGGTTTTTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SQLKSNIWNPDAPCARNYTSPAF*SGFLPL
Trigger: GAGGGGCAAAAACCCAGATCAGAATGCAGGCGACGT...ATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGATTTGAGTTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR GCA 90 bp ATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATCTGGAGCAACAACTGTaGAAATGCACCGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: IQYLESRCTLCKKLYGLHLEQQL*KCTAHQ
Trigger: CTGATGGGCGGTGCATTTGCACAGTTGTTGCTCCAG...ATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR GCA 90 bp AATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGCTTTCCCTCGTCAGTTaGACTTTCTGCCTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: NIWNPDAPCARNYMGCIQLSLVS*TFCLPV
Trigger: GACTGGCAGGCAGAAAGTGCAACTGACGAGGGAAAG...CTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGGAGTCGACAGCCTCGTaGTGTTCAGTCCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELESTAS*CSVPPR
Trigger: CCTTGGTGGGACTGAACACCACGAGGCTGTCGACTC...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338858.9
CDS-3UTR CCA 90 bp AATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGTACTCCAGGCTTCGTTaGGCAAGCACTCTCCCCATA +
Preference number: 4 (lower is better)
Translates to: NIWNPDAPCARNYMGCIQYSRLR*ASTLPI
Trigger: TATGGGGAGAGTGCTTGCCCAACGAAGCCTGGAGTA...CTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CCA 90 bp ATGGTGCTTGAATCTAATCCAGCCTTGCATCTCTATGGCAAAGGGATACTGCTGAGGAATAATACACCTTaGCTCCAGTTAAGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: MVLESNPALHLYGKGILLRNNTP*LQLSGS
Trigger: ACTCCCACTTAACTGGAGCCAAGGTGTATTATTCCT...CAGCAGTATCCCTTTGCCATAGAGATGCAAGGCTGGATTAGATTCAAGCACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CCA 90 bp ATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAGCCTGCATTCTGATCTaGGTTTTTGCCCCTCTTTAC +
Preference number: 4 (lower is better)
Translates to: MHLVQETIWVAFSGVNRVACILI*VFAPLY
Trigger: GTAAAGAGGGGCAAAAACCCAGATCAGAATGCAGGC...TACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370103.9
3UTR CAA 72 bp CATCTCTATGGCAAAGGGATACTGCTGAGTCTTAGGTaGTTTCGGCCAAAACTTAGGACAGAATTTGTACCG +
Preference number: 4 (lower is better)
Translates to: HLYGKGILLSLR*FRPKLRTEFVP
Trigger: CGGTACAAATTCTGTCCTAAGTTTTGGCCGAAACAACCTAAGACTCAGCAGTATCCCTTTGCCATAGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp AGGGAATGTCTGTGTACTCATATGTGGAGGTTTTGGTGGAATAGGAATAATACAGCACCAATTTCCTCCTaGATACCAGTGAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: RECLCTHMWRFWWNRNNTAPISS*IPVRTA
Trigger: TGCTGTCCTCACTGGTATTCAGGAGGAAATTGGTGC...TGTATTATTCCTATTCCACCAAAACCTCCACATATGAGTACACAGACATTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR GCA 90 bp ATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATCAACAACTGTGCAAATaGACCGCCCATCAGGATCCT +
Preference number: 4 (lower is better)
Translates to: IQYLESRCTLCKKLYGLHQQLCK*TAHQDP
Trigger: AGGATCCTGATGGGCGGTGCATTTGCACAGTTGTTG...ATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR GCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGGTTGGCGAAGTTGCCTaGTTTTGGCATCCCGGGAAC +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELVGEVA*FWHPGN
Trigger: GTTCCCGGGATGCCAAAAGCAGGCAACTTCGCCAAC...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR GCA 90 bp AATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGTGCATTCTGGTTAGTTaGATACACAGCCCACAGCCC +
Preference number: 4 (lower is better)
Translates to: NIWNPDAPCARNYMGCIQCILVS*IHSPQP
Trigger: GGGCTGTGGGCTGTGTATGCAACTAACCAGAATGCA...CTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR GCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGGTCAGTTGCACTTTCTaGCTGCCAGTCAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELVSCTF*LPVRAE
Trigger: CTCGGCTCTGACTGGCAGGCAGAAAGTGCAACTGAC...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CCA 90 bp GTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAACTCAGTTGACCTTTTCCAGTAGTTaGCGAAGTTGCCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: VQETIWVAFSGVNRVTQLTFSSS*RSCLLL
Trigger: CAAAAGCAGGCAACTTCGCCAACTACTGGAAAAGGT...CAACTGAGTTACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CCA 90 bp ATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTATTGGCTCCAGTTAAGTaGGAGTTGGTGACATACAGT +
Preference number: 4 (lower is better)
Translates to: MHLVQETIWVAFSGVNRVLAPVK*ELVTYS
Trigger: ACTGTATGTCACCAACTCCCACTTAACTGGAGCCAA...TACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CCA 90 bp AGGGAATGTCTGTGTACTCATATGTGGAGGTTTTGGTGGAATAGGAATAATACAGGCTTGGGGTGTCTTTaGCTTCGATGGTGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: RECLCTHMWRFWWNRNNTGLGCL*LRWCLN
Trigger: ATTCAAGCACCATCGAAGCCAAAGACACCCCAAGCC...TGTATTATTCCTATTCCACCAAAACCTCCACATATGAGTACACAGACATTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGCCTCCTGAATACCAGTaGGGACAGCAGACAGATTCC +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELPPEYQ*GQQTDS
Trigger: GGAATCTGTCTGCTGTCCTCACTGGTATTCAGGAGG...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR TCA 90 bp CAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTGTTGATTCAGCCCCACTaGCAAAGTCTGCAATTGATT +
Preference number: 4 (lower is better)
Translates to: QLFITSKVSWLSWLMTILLIQPH*QSLQLI
Trigger: AATCAATTGCAGACTTTGTCAGTGGGGCTGAATCAA...CAATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp AATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGTTAAGTGGGAGTTGGTaGCATACAGTGTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: NIWNPDAPCARNYMGCIQLSGSW*HTVSHR
Trigger: TCTGTGGGACACTGTATGTCACCAACTCCCACTTAA...CTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR TCA 90 bp TTTTGTACCAGAACTATTCTAGGTGCTGAGAATACAAAGGTGAACAGGGAGGCATGCCAGACTGAAGCATaGTTTGTACAAAGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: FCTRTILGAENTKVNREACQTEA*FVQSKK
Trigger: CTTCTTGCTTTGTACAAATCATGCTTCAGTCTGGCA...TGCCTCCCTGTTCACCTTTGTATTCTCAGCACCTAGAATAGTTCTGGTACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR GCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGCTGGAGCAACAACTGTaGAAATGCACCGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELLEQQL*KCTAHQ
Trigger: CTGATGGGCGGTGCATTTGCACAGTTGTTGCTCCAG...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR GCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGAGTAGTTGGCGAAGTTaGCTGCTTTTGGCATCCCGG +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELSSWRS*LLLASR
Trigger: CCGGGATGCCAAAAGCAGGCAACTTCGCCAACTACT...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR GCA 90 bp CAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTGCGATCATCTTCAATCTaGCGAAATTTTGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QLFITSKVSWLSWLMTILRSSSI*RNFAFS
Trigger: GCTGAAGGCAAAATTTCGGCAGATTGAAGATGATCG...CAATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR GCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGTCTTGGGGTAGCCAGTaGTCCAGCTCTTCATCACCT +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELSWGSQ*SSSSSP
Trigger: AGGTGATGAAGAGCTGGAGCACTGGCTACCCCAAGA...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR GCA 90 bp ATGGTGCTTGAATCTAATCCAGCCTTGCATCTCTATGGCAAAGGGATACTGCTGAAAACATGTCACATTTaGCTATGTGTCATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: MVLESNPALHLYGKGILLKTCHI*LCVILC
Trigger: ACAGAGGATGACACATAGGCAAATGTGACATGTTTT...CAGCAGTATCCCTTTGCCATAGAGATGCAAGGCTGGATTAGATTCAAGCACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR GCA 90 bp ATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATAGGTTGGACGTCGCCTaGATTCTGATCTGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: IQYLESRCTLCKKLYGLHRLDVA*ILIWVF
Trigger: AAAAACCCAGATCAGAATGCAGGCGACGTCCAACCT...ATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR GCA 90 bp GTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAACTCAGTTGTCCAGATGCACCTTGTaGAAGAAACTATATGGGTTG +
Preference number: 4 (lower is better)
Translates to: VQETIWVAFSGVNRVTQLSRCTL*KKLYGL
Trigger: CAACCCATATAGTTTCTTGCACAAGGTGCATCTGGA...CAACTGAGTTACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR GCA 90 bp CAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTGAATCTAATCCAGCCTTaGATCTCTATGGCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: QLFITSKVSWLSWLMTILNLIQP*ISMAKG
Trigger: TCCCTTTGCCATAGAGATGCAAGGCTGGATTAGATT...CAATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGCAGTCCCACCAAGGATaGGAGAGTTTGGGACATCCA +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELQSHQG*ESLGHP
Trigger: TGGATGTCCCAAACTCTCCCATCCTTGGTGGGACTG...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338858.9
CDS-3UTR CCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGGAAGTTGCCTGCTTTTaGCATCCCGGGAACACAGGT +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELEVACF*HPGNTG
Trigger: ACCTGTGTTCCCGGGATGCCAAAAGCAGGCAACTTC...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CCA 90 bp TTTTGTACCAGAACTATTCTAGGTGCTGAGAATACAAAGGTGAACAGGGAGGCATGTCTTGACTGTAACTaGGCCTGTGATTTTCATCAG +
Preference number: 4 (lower is better)
Translates to: FCTRTILGAENTKVNREACLDCN*ACDFHQ
Trigger: CTGATGAAAATCACAGGCCCAGTTACAGTCAAGACA...TGCCTCCCTGTTCACCTTTGTATTCTCAGCACCTAGAATAGTTCTGGTACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGTACTCCAGGCTTCGTTaGGCAAGCACTCTCCCCATA +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELYSRLR*ASTLPI
Trigger: TATGGGGAGAGTGCTTGCCCAACGAAGCCTGGAGTA...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CCA 90 bp AGGTTGTTTCGGCCAAAACTTAGGACAGAATTTGTACCGGAGGTTAAAAGCTTCATATTGCCTGCATTCTaGTTAGTTGCATACACAGCC +
Preference number: 4 (lower is better)
Translates to: RLFRPKLRTEFVPEVKSFILPAF*LVAYTA
Trigger: GGCTGTGTATGCAACTAACCAGAATGCAGGCAATAT...GAAGCTTTTAACCTCCGGTACAAATTCTGTCCTAAGTTTTGGCCGAAACAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CCA 90 bp ATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAACCTCCAAGGTATCTTaGTTAAGTTGGCTGATGACA +
Preference number: 4 (lower is better)
Translates to: MHLVQETIWVAFSGVNRVTSKVS*LSWLMT
Trigger: TGTCATCAGCCAACTTAACCAAGATACCTTGGAGGT...TACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CCA 90 bp AGGTTGTTTCGGCCAAAACTTAGGACAGAATTTGTACCGGAGGTTAAAAGCTTCACCTCCAAGGTATCTTaGTTAAGTTGGCTGATGACA +
Preference number: 4 (lower is better)
Translates to: RLFRPKLRTEFVPEVKSFTSKVS*LSWLMT
Trigger: TGTCATCAGCCAACTTAACCAAGATACCTTGGAGGT...GAAGCTTTTAACCTCCGGTACAAATTCTGTCCTAAGTTTTGGCCGAAACAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CCA 90 bp ATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAAGGAATAATACACCTTaGCTCCAGTTAAGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: MHLVQETIWVAFSGVNRVRNNTP*LQLSGS
Trigger: ACTCCCACTTAACTGGAGCCAAGGTGTATTATTCCT...TACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CCA 90 bp CAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTGCTGTGTACTCATATGTaGAGGTTTTGGTGGAATAGG +
Preference number: 4 (lower is better)
Translates to: QLFITSKVSWLSWLMTILLCTHM*RFWWNR
Trigger: CCTATTCCACCAAAACCTCCACATATGAGTACACAG...CAATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CCA 90 bp CCAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTTGTCTTTGGCTTCGATaGTGCTTGAATCTAATCCAG +
Preference number: 4 (lower is better)
Translates to: PALHHLQGILVKLADDNICLWLR*CLNLIQ
Trigger: CTGGATTAGATTCAAGCACCATCGAAGCCAAAGACA...AATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGGCACCAATTTCCTCCTaGATACCAGTGAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELAPISS*IPVRTA
Trigger: TGCTGTCCTCACTGGTATTCAGGAGGAAATTGGTGC...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR TCA 90 bp AATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGAAGGTTGTATGTCCTTaGTTCAGCCCCACTGACAAA +
Preference number: 4 (lower is better)
Translates to: NIWNPDAPCARNYMGCIQKVVCP*FSPTDK
Trigger: TTTGTCAGTGGGGCTGAATCAAGGACATACAACCTT...CTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR TCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGGTGTCCCACAGATCATaGAAGATTCCCCTGCACTTC +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELVSHRS*KIPLHF
Trigger: GAAGTGCAGGGGAATCTTTCATGATCTGTGGGACAC...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR TCA 90 bp ATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTATTTTTCCACATACAGTaGATCAAGGTAACAAGGGGT +
Preference number: 4 (lower is better)
Translates to: MHLVQETIWVAFSGVNRVFFHIQ*IKVTRG
Trigger: ACCCCTTGTTACCTTGATTCACTGTATGTGGAAAAA...TACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR GCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGCAACAACTGTGCAAATaGACCGCCCATCAGGATCCT +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELQQLCK*TAHQDP
Trigger: AGGATCCTGATGGGCGGTGCATTTGCACAGTTGTTG...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR GCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGTGCATTCTGGTTAGTTaGATACACAGCCCACAGCCC +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELCILVS*IHSPQP
Trigger: GGGCTGTGGGCTGTGTATGCAACTAACCAGAATGCA...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR GCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGCATGAAAGATTCCCCTaGACTTCTCTTGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELHERFP*TSLGVA
Trigger: GGCTACCCCAAGAGAAGTGCAGGGGAATCTTTCATG...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR GCA 90 bp ATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATGAGAGCTCGATCTCTTaGATTGTAGTCAAGCATGGA +
Preference number: 4 (lower is better)
Translates to: IQYLESRCTLCKKLYGLHESSIS*IVVKHG
Trigger: TCCATGCTTGACTACAATGCAAGAGATCGAGCTCTC...ATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGACATTGAACAGCACCTaGTGGCCATTGTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELTLNST*WPLFQA
Trigger: TGCCTGGAACAATGGCCACCAGGTGCTGTTCAATGT...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CCA 90 bp AGGTTGTTTCGGCCAAAACTTAGGACAGAATTTGTACCGGAGGTTAAAAGCTTCAACAAGAACTGTCCTTaGAGCTCTGAATCATACCAT +
Preference number: 4 (lower is better)
Translates to: RLFRPKLRTEFVPEVKSFNKNCP*SSESYH
Trigger: ATGGTATGATTCAGAGCTCCAAGGACAGTTCTTGTT...GAAGCTTTTAACCTCCGGTACAAATTCTGTCCTAAGTTTTGGCCGAAACAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGGACTGGGACATGTTCTaGACCTTTTCCAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELDWDMF*TFSSSW
Trigger: CCAACTACTGGAAAAGGTTCAGAACATGTCCCAGTC...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR TCA 90 bp TTTTGTACCAGAACTATTCTAGGTGCTGAGAATACAAAGGTGAACAGGGAGGCACTTGTTAAAATAGAGTaGGCCATTGTAGACAACATG +
Preference number: 4 (lower is better)
Translates to: FCTRTILGAENTKVNREALVKIE*AIVDNM
Trigger: CATGTTGTCTACAATGGCTCACTCTATTTTAACAAG...TGCCTCCCTGTTCACCTTTGTATTCTCAGCACCTAGAATAGTTCTGGTACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGTTAAGTGGGAGTTGGTaGCATACAGTGTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELLSGSW*HTVSHR
Trigger: TCTGTGGGACACTGTATGTCACCAACTCCCACTTAA...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR TCA 90 bp AGGGAATGTCTGTGTACTCATATGTGGAGGTTTTGGTGGAATAGGAATAATACAGCATATTTCAGATGTTaGGGTGTGCATAATCCGATG +
Preference number: 4 (lower is better)
Translates to: RECLCTHMWRFWWNRNNTAYFRC*GVHNPM
Trigger: CATCGGATTATGCACACCTCAACATCTGAAATATGC...TGTATTATTCCTATTCCACCAAAACCTCCACATATGAGTACACAGACATTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR GCA 90 bp ATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATCGATCATCTTCAATCTaGCGAAATTTTGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: IQYLESRCTLCKKLYGLHRSSSI*RNFAFS
Trigger: GCTGAAGGCAAAATTTCGGCAGATTGAAGATGATCG...ATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR GCA 90 bp GTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAACTCAGTTGGATGACAATATTGCCTaGATTCTGGTTAGTTGCATA +
Preference number: 4 (lower is better)
Translates to: VQETIWVAFSGVNRVTQLDDNIA*ILVSCI
Trigger: TATGCAACTAACCAGAATGCAGGCAATATTGTCATC...CAACTGAGTTACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CCA 90 bp GTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAACTCAGTTGGTATCTTGGTTAAGTTaGCTGATGACAATATTGCCT +
Preference number: 4 (lower is better)
Translates to: VQETIWVAFSGVNRVTQLVSWLS*LMTILP
Trigger: AGGCAATATTGTCATCAGCCAACTTAACCAAGATAC...CAACTGAGTTACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CCA 90 bp TTCGGCCAAAACTTAGGACAGAATTTGTACCGGAGGTTAAAAGCTTCTGGCTCTCATATGTGGAGGTTTTaGTGGAATAGGAATAATACA +
Preference number: 4 (lower is better)
Translates to: FGQNLGQNLYRRLKASGSHMWRF*WNRNNT
Trigger: TGTATTATTCCTATTCCACCAAAACCTCCACATATG...AGAGCCAGAAGCTTTTAACCTCCGGTACAAATTCTGTCCTAAGTTTTGGCCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CCA 90 bp AATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGCTGTGTACTCATATGTaGAGGTTTTGGTGGAATAGG +
Preference number: 4 (lower is better)
Translates to: NIWNPDAPCARNYMGCIQLCTHM*RFWWNR
Trigger: CCTATTCCACCAAAACCTCCACATATGAGTACACAG...CTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CCA 90 bp ATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATATGGGTTGCATTCAGTaGAGTGAACAGAGTAACTCA +
Preference number: 4 (lower is better)
Translates to: IQYLESRCTLCKKLYGLHMGCIQ*SEQSNS
Trigger: TGAGTTACTCTGTTCACTCCACTGAATGCAACCCAT...ATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGAGCCTTGCATCTCTATaGCAAAGGGATACTGCTGAG +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELSLASL*QRDTAE
Trigger: CTCAGCAGTATCCCTTTGCCATAGAGATGCAAGGCT...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGAAGGTTGTATGTCCTTaGTTCAGCCCCACTGACAAA +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELKVVCP*FSPTDK
Trigger: TTTGTCAGTGGGGCTGAATCAAGGACATACAACCTT...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR GCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGGAGAGCTCGATCTCTTaGATTGTAGTCAAGCATGGA +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELESSIS*IVVKHG
Trigger: TCCATGCTTGACTACAATGCAAGAGATCGAGCTCTC...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR GCA 90 bp CAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTGCAATTAGCTTTTTCATaGAGTCACGAAGTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: QLFITSKVSWLSWLMTILQLAFS*SHEVLF
Trigger: AAACAAGACTTCGTGACTGCATGAAAAAGCTAATTG...CAATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR GCA 90 bp CAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTGAAATACTATTGCTTATaGTTCTCCTTTCTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: QLFITSKVSWLSWLMTILKYYCL*FSFLLP
Trigger: AGGCAACAGAAAGGAGAAGCATAAGCAATAGTATTT...CAATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CCA 90 bp AGGGAATGTCTGTGTACTCATATGTGGAGGTTTTGGTGGAATAGGAATAATACAACACAGGTTTTGTTCTaGAGCAACAACTGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: RECLCTHMWRFWWNRNNTTQVLF*SNNCAN
Trigger: ATTTGCACAGTTGTTGCTCCAGAACAAAACCTGTGT...TGTATTATTCCTATTCCACCAAAACCTCCACATATGAGTACACAGACATTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGACCTTTTCCAGTAGTTaGCGAAGTTGCCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELTFSSS*RSCLLL
Trigger: CAAAAGCAGGCAACTTCGCCAACTACTGGAAAAGGT...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CCA 90 bp AGTCAACTCAAATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATATTGCCTGCATTCTaGTTAGTTGCATACACAGCC +
Preference number: 4 (lower is better)
Translates to: SQLKSNIWNPDAPCARNYILPAF*LVAYTA
Trigger: GGCTGTGTATGCAACTAACCAGAATGCAGGCAATAT...ATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGATTTGAGTTGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGTTGGCTCCAGTTAAGTaGGAGTTGGTGACATACAGT +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELLAPVK*ELVTYS
Trigger: ACTGTATGTCACCAACTCCCACTTAACTGGAGCCAA...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CCA 90 bp GTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAACTCAGTTGCATATGTGGAGGTTTTaGTGGAATAGGAATAATACA +
Preference number: 4 (lower is better)
Translates to: VQETIWVAFSGVNRVTQLHMWRF*WNRNNT
Trigger: TGTATTATTCCTATTCCACCAAAACCTCCACATATG...CAACTGAGTTACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CCA 90 bp ATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTACATTGTAGTCAAGCATaGATATGTGAAAGTATTGGT +
Preference number: 4 (lower is better)
Translates to: MHLVQETIWVAFSGVNRVHCSQA*ICESIG
Trigger: ACCAATACTTTCACATATCCATGCTTGACTACAATG...TACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CCA 90 bp CCAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTCATTGTAGTCAAGCATaGATATGTGAAAGTATTGGT +
Preference number: 4 (lower is better)
Translates to: PALHHLQGILVKLADDNIHCSQA*ICESIG
Trigger: ACCAATACTTTCACATATCCATGCTTGACTACAATG...AATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR TCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGTTGATTCAGCCCCACTaGCAAAGTCTGCAATTGATT +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELLIQPH*QSLQLI
Trigger: AATCAATTGCAGACTTTGTCAGTGGGGCTGAATCAA...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR TCA 90 bp AATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGCTTGTTAAAATAGAGTaGGCCATTGTAGACAACATG +
Preference number: 4 (lower is better)
Translates to: NIWNPDAPCARNYMGCIQLVKIE*AIVDNM
Trigger: CATGTTGTCTACAATGGCTCACTCTATTTTAACAAG...CTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR TCA 90 bp AATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGTCAAGCATGGATATGTaGAAGTATTGGTTATGGAAG +
Preference number: 4 (lower is better)
Translates to: NIWNPDAPCARNYMGCIQSSMDM*KYWLWK
Trigger: CTTCCATAACCAATACTTTCACATATCCATGCTTGA...CTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR GCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGCGATCATCTTCAATCTaGCGAAATTTTGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELRSSSI*RNFAFS
Trigger: GCTGAAGGCAAAATTTCGGCAGATTGAAGATGATCG...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR GCA 90 bp ATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATAAAACATGTCACATTTaGCTATGTGTCATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: IQYLESRCTLCKKLYGLHKTCHI*LCVILC
Trigger: ACAGAGGATGACACATAGGCAAATGTGACATGTTTT...ATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR GCA 90 bp AGTCAACTCAAATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATTCTGATCTGGGTTTTTaGCCCTCTTTACTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SQLKSNIWNPDAPCARNYSDLGF*PSLLSF
Trigger: AAAAGAGAGTAAAGAGGGGCAAAAACCCAGATCAGA...ATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGATTTGAGTTGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CCA 90 bp AGTCAACTCAAATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATACACAGGTTTTGTTCTaGAGCAACAACTGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: SQLKSNIWNPDAPCARNYTQVLF*SNNCAN
Trigger: ATTTGCACAGTTGTTGCTCCAGAACAAAACCTGTGT...ATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGATTTGAGTTGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGTGTCTTGACTGTAACTaGGCCTGTGATTTTCATCAG +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELCLDCN*ACDFHQ
Trigger: CTGATGAAAATCACAGGCCCAGTTACAGTCAAGACA...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGATATTGCCTGCATTCTaGTTAGTTGCATACACAGCC +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELILPAF*LVAYTA
Trigger: GGCTGTGTATGCAACTAACCAGAATGCAGGCAATAT...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CCA 90 bp AGGGAATGTCTGTGTACTCATATGTGGAGGTTTTGGTGGAATAGGAATAATACAGTATCTTGGTTAAGTTaGCTGATGACAATATTGCCT +
Preference number: 4 (lower is better)
Translates to: RECLCTHMWRFWWNRNNTVSWLS*LMTILP
Trigger: AGGCAATATTGTCATCAGCCAACTTAACCAAGATAC...TGTATTATTCCTATTCCACCAAAACCTCCACATATGAGTACACAGACATTCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGACCTCCAAGGTATCTTaGTTAAGTTGGCTGATGACA +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELTSKVS*LSWLMT
Trigger: TGTCATCAGCCAACTTAACCAAGATACCTTGGAGGT...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGAGGAATAATACACCTTaGCTCCAGTTAAGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELRNNTP*LQLSGS
Trigger: ACTCCCACTTAACTGGAGCCAAGGTGTATTATTCCT...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CCA 90 bp ATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATATGTGGAGGTTTTGGTaGAATAGGAATAATACACCT +
Preference number: 4 (lower is better)
Translates to: IQYLESRCTLCKKLYGLHMWRFW*NRNNTP
Trigger: AGGTGTATTATTCCTATTCCACCAAAACCTCCACAT...ATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CCA 90 bp AGGGAATGTCTGTGTACTCATATGTGGAGGTTTTGGTGGAATAGGAATAATACAATGTGGAGGTTTTGGTaGAATAGGAATAATACACCT +
Preference number: 4 (lower is better)
Translates to: RECLCTHMWRFWWNRNNTMWRFW*NRNNTP
Trigger: AGGTGTATTATTCCTATTCCACCAAAACCTCCACAT...TGTATTATTCCTATTCCACCAAAACCTCCACATATGAGTACACAGACATTCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGCTGTGTACTCATATGTaGAGGTTTTGGTGGAATAGG +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELLCTHM*RFWWNR
Trigger: CCTATTCCACCAAAACCTCCACATATGAGTACACAG...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGGTGCAAGAAACTATATaGGTTGCATTCAGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELVQETI*VAFSGV
Trigger: CACTCCACTGAATGCAACCCATATAGTTTCTTGCAC...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR TCA 90 bp AGTCAACTCAAATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATTTCTCTTTCAACTCCTaGAAATGCTTGGTCATAAGT +
Preference number: 4 (lower is better)
Translates to: SQLKSNIWNPDAPCARNYFSFNS*KCLVIS
Trigger: ACTTATGACCAAGCATTTTCAGGAGTTGAAAGAGAA...ATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGATTTGAGTTGACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR TCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGTGCTTATTGCCAGACTaGAGCATGATTTGTACAAAG +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELCLLPD*SMICTK
Trigger: CTTTGTACAAATCATGCTTCAGTCTGGCAATAAGCA...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR GCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGAATCTGCCGAAATTTTaGCTTCAGCCCTTTCATTTG +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELNLPKF*LQPFHL
Trigger: CAAATGAAAGGGCTGAAGGCAAAATTTCGGCAGATT...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR GCA 90 bp ATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATATGTTAGCTTTTTCATaGAGTCACGAAGTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: IQYLESRCTLCKKLYGLHMLAFS*SHEVLF
Trigger: AAACAAGACTTCGTGACTGCATGAAAAAGCTAACAT...ATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR GCA 90 bp AGTCAACTCAAATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATTATTTGGAATCCAGATaGACCTTGTGCAAGAAACTA +
Preference number: 4 (lower is better)
Translates to: SQLKSNIWNPDAPCARNYYLESR*TLCKKL
Trigger: TAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATA...ATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGATTTGAGTTGACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGACACAGGTTTTGTTCTaGAGCAACAACTGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELTQVLF*SNNCAN
Trigger: ATTTGCACAGTTGTTGCTCCAGAACAAAACCTGTGT...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CCA 90 bp AGTCAACTCAAATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATCTCAAATCCAATATTTaGAATCCAGATGCACCTTGT +
Preference number: 4 (lower is better)
Translates to: SQLKSNIWNPDAPCARNYLKSNI*NPDAPC
Trigger: ACAAGGTGCATCTGGATTCCAAATATTGGATTTGAG...ATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGATTTGAGTTGACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR TCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGTTCTCTTTCAACTCCTaGAAATGCTTGGTCATAAGT +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELFSFNS*KCLVIS
Trigger: ACTTATGACCAAGCATTTTCAGGAGTTGAAAGAGAA...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR TCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGCTTGTTAAAATAGAGTaGGCCATTGTAGACAACATG +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELLVKIE*AIVDNM
Trigger: CATGTTGTCTACAATGGCTCACTCTATTTTAACAAG...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR TCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGTCAAGCATGGATATGTaGAAGTATTGGTTATGGAAG +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELSSMDM*KYWLWK
Trigger: CTTCCATAACCAATACTTTCACATATCCATGCTTGA...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR GCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGGATGACAATATTGCCTaGATTCTGGTTAGTTGCATA +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELDDNIA*ILVSCI
Trigger: TATGCAACTAACCAGAATGCAGGCAATATTGTCATC...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR GCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGAAAACATGTCACATTTaGCTATGTGTCATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELKTCHI*LCVILC
Trigger: ACAGAGGATGACACATAGGCAAATGTGACATGTTTT...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGGTATCTTGGTTAAGTTaGCTGATGACAATATTGCCT +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELVSWLS*LMTILP
Trigger: AGGCAATATTGTCATCAGCCAACTTAACCAAGATAC...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGATGTGGAGGTTTTGGTaGAATAGGAATAATACACCT +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELMWRFW*NRNNTP
Trigger: AGGTGTATTATTCCTATTCCACCAAAACCTCCACAT...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR GCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGATGTTAGCTTTTTCATaGAGTCACGAAGTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELMLAFS*SHEVLF
Trigger: AAACAAGACTTCGTGACTGCATGAAAAAGCTAACAT...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338858.9
ENST00000370103.9
CDS-3UTR CCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGCATATGTGGAGGTTTTaGTGGAATAGGAATAATACA +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELHMWRF*WNRNNT
Trigger: TGTATTATTCCTATTCCACCAAAACCTCCACATATG...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CCA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGCATTGTAGTCAAGCATaGATATGTGAAAGTATTGGT +
Preference number: 4 (lower is better)
Translates to: KMLARDLKMTVQHRIRELHCSQA*ICESIG
Trigger: ACCAATACTTTCACATATCCATGCTTGACTACAATG...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS CCA 90 bp GCGAAGTTGCCTGCTTTTGGCATCCCGGGAACACAGGTTTTGTTCTaGAGCAACAACTGTGCAAATGCACCGCCCATCAGGATCCTGAGC +
Preference number: 5 (lower is better)
Translates to: AKLPAFGIPGTQVLF*SNNCANAPPIRILS
Trigger: GCTCAGGATCCTGATGGGCGGTGCATTTGCACAGTTGTTGCTCCAGAACAAAACCTGTGTTCCCGGGATGCCAAAAGCAGGCAACTTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000462354.5
ENST00000465523.5
ENST00000468901.1
ENST00000536598.1
CDS-3UTR CAA 90 bp CTTGGGGTGTCTTTGGCTTCGATGGTGCTTGAATCTAATCCAGCCTTGCATCTCCCAGTTAAGTGGGAGTaGGTGACATACAGTGTCCCA +
Preference number: 5 (lower is better)
Translates to: LGVSLASMVLESNPALHLPVKWE*VTYSVP
Trigger: TGGGACACTGTATGTCACCAACTCCCACTTAACTGG...GAGATGCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CAA 90 bp TTCTCTTGGGGTAGCCAGTGCTCCAGCTCTTCATCACCTCCAAGGTATCTTGGTCAATCTGCCGAAATTTaGCCTTCAGCCCTTTCATTT +
Preference number: 5 (lower is better)
Translates to: FSWGSQCSSSSSPPRYLGQSAEI*PSALSF
Trigger: AAATGAAAGGGCTGAAGGCAAAATTTCGGCAGATTG...ACCAAGATACCTTGGAGGTGATGAAGAGCTGGAGCACTGGCTACCCCAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CAA 90 bp ATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAATACTCCAGGCTTCGTaGGGCAAGCACTCTCCCCAT +
Preference number: 5 (lower is better)
Translates to: MHLVQETIWVAFSGVNRVILQAS*GKHSPH
Trigger: ATGGGGAGAGTGCTTGCCCAACGAAGCCTGGAGTAT...TACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp CAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTGATACTCCAGGCTTCGTaGGGCAAGCACTCTCCCCAT +
Preference number: 5 (lower is better)
Translates to: QLFITSKVSWLSWLMTILILQAS*GKHSPH
Trigger: ATGGGGAGAGTGCTTGCCCAACGAAGCCTGGAGTAT...CAATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CAA 90 bp GAAAACCAGCATACTCCAGGCTTCGTTGGGCAAGCACTCTCCCCATATCAAAGCGAAAACATGTCACATTaGCCTATGTGTCATCCTCTG +
Preference number: 5 (lower is better)
Translates to: ENQHTPGFVGQALSPYQSENMSH*PMCHPL
Trigger: CAGAGGATGACACATAGGCAAATGTGACATGTTTTC...GCTTTGATATGGGGAGAGTGCTTGCCCAACGAAGCCTGGAGTATGCTGGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CAA 90 bp TTCTCTTGGGGTAGCCAGTGCTCCAGCTCTTCATCACCTCCAAGGTATCTTGGTGTGATTTTCATCAGTTaGCCACATGCTTATTGCCAG +
Preference number: 5 (lower is better)
Translates to: FSWGSQCSSSSSPPRYLGVIFIS*PHAYCQ
Trigger: CTGGCAATAAGCATGTGGCAAACTGATGAAAATCAC...ACCAAGATACCTTGGAGGTGATGAAGAGCTGGAGCACTGGCTACCCCAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CAA 90 bp TTCGGCCAAAACTTAGGACAGAATTTGTACCGGAGGTTAAAAGCTTCTGGCTCTCCGGGAACACAGGTTTaGTTCTGGAGCAACAACTGT +
Preference number: 5 (lower is better)
Translates to: FGQNLGQNLYRRLKASGSPGTQV*FWSNNC
Trigger: ACAGTTGTTGCTCCAGAACAAAACCTGTGTTCCCGG...AGAGCCAGAAGCTTTTAACCTCCGGTACAAATTCTGTCCTAAGTTTTGGCCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CAA 90 bp ATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATCGAAGTTGCCTGCTTTaGGCATCCCGGGAACACAGG +
Preference number: 5 (lower is better)
Translates to: IQYLESRCTLCKKLYGLHRSCLL*ASREHR
Trigger: CCTGTGTTCCCGGGATGCCAAAAGCAGGCAACTTCG...ATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp ATGGTGCTTGAATCTAATCCAGCCTTGCATCTCTATGGCAAAGGGATACTGCTGCACCTCCAAGGTATCTaGGTTAAGTTGGCTGATGAC +
Preference number: 5 (lower is better)
Translates to: MVLESNPALHLYGKGILLHLQGI*VKLADD
Trigger: GTCATCAGCCAACTTAACCAAGATACCTTGGAGGTG...CAGCAGTATCCCTTTGCCATAGAGATGCAAGGCTGGATTAGATTCAAGCACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CAA 90 bp TTCTCTTGGGGTAGCCAGTGCTCCAGCTCTTCATCACCTCCAAGGTATCTTGGTGGATATGTGAAAGTATaGGTTATGGAAGGGAATGTC +
Preference number: 5 (lower is better)
Translates to: FSWGSQCSSSSSPPRYLGGYVKV*VMEGNV
Trigger: GACATTCCCTTCCATAACCAATACTTTCACATATCC...ACCAAGATACCTTGGAGGTGATGAAGAGCTGGAGCACTGGCTACCCCAAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CAA 90 bp ATGGTGCTTGAATCTAATCCAGCCTTGCATCTCTATGGCAAAGGGATACTGCTGAGAGAGCTCGATCTCTaGCATTGTAGTCAAGCATGG +
Preference number: 5 (lower is better)
Translates to: MVLESNPALHLYGKGILLRELDL*HCSQAW
Trigger: CCATGCTTGACTACAATGCAAGAGATCGAGCTCTCT...CAGCAGTATCCCTTTGCCATAGAGATGCAAGGCTGGATTAGATTCAAGCACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CAA 90 bp ATGGTGCTTGAATCTAATCCAGCCTTGCATCTCTATGGCAAAGGGATACTGCTGGAATCTAATCCAGCCTaGCATCTCTATGGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: MVLESNPALHLYGKGILLESNPA*HLYGKG
Trigger: CCCTTTGCCATAGAGATGCAAGGCTGGATTAGATTC...CAGCAGTATCCCTTTGCCATAGAGATGCAAGGCTGGATTAGATTCAAGCACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CAA 90 bp TTCGGCCAAAACTTAGGACAGAATTTGTACCGGAGGTTAAAAGCTTCTGGCTCTTGGCTTCGATGGTGCTaGAATCTAATCCAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: FGQNLGQNLYRRLKASGSWLRWC*NLIQPC
Trigger: GCAAGGCTGGATTAGATTCAAGCACCATCGAAGCCA...AGAGCCAGAAGCTTTTAACCTCCGGTACAAATTCTGTCCTAAGTTTTGGCCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CAA 90 bp CAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTGTGGCTTGGGGTGTCTTaGGCTTCGATGGTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: QLFITSKVSWLSWLMTILWLGVS*ASMVLE
Trigger: TTCAAGCACCATCGAAGCCAAAGACACCCCAAGCCA...CAATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CAA 90 bp GTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAACTCAGTTGCCGGGAACACAGGTTTaGTTCTGGAGCAACAACTGT +
Preference number: 5 (lower is better)
Translates to: VQETIWVAFSGVNRVTQLPGTQV*FWSNNC
Trigger: ACAGTTGTTGCTCCAGAACAAAACCTGTGTTCCCGG...CAACTGAGTTACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp AGGTTGTTTCGGCCAAAACTTAGGACAGAATTTGTACCGGAGGTTAAAAGCTTCTGCAGTCACGAAGTCTaGTTTCCAAGCTCAGCACTC +
Preference number: 5 (lower is better)
Translates to: RLFRPKLRTEFVPEVKSFCSHEV*FPSSAL
Trigger: GAGTGCTGAGCTTGGAAACAAGACTTCGTGACTGCA...GAAGCTTTTAACCTCCGGTACAAATTCTGTCCTAAGTTTTGGCCGAAACAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CAA 90 bp ATGGTGCTTGAATCTAATCCAGCCTTGCATCTCTATGGCAAAGGGATACTGCTGTTAGTTCCTGCCCACTaGAAAGGAAGGTTGTATGTC +
Preference number: 5 (lower is better)
Translates to: MVLESNPALHLYGKGILLLVPAH*KGRLYV
Trigger: GACATACAACCTTCCTTTCAAGTGGGCAGGAACTAA...CAGCAGTATCCCTTTGCCATAGAGATGCAAGGCTGGATTAGATTCAAGCACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CAA 90 bp ATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTACCAGTTAAGTGGGAGTaGGTGACATACAGTGTCCCA +
Preference number: 5 (lower is better)
Translates to: MHLVQETIWVAFSGVNRVPVKWE*VTYSVP
Trigger: TGGGACACTGTATGTCACCAACTCCCACTTAACTGG...TACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGCGAAGTTGCCTGCTTTaGGCATCCCGGGAACACAGG +
Preference number: 5 (lower is better)
Translates to: KMLARDLKMTVQHRIRELRSCLL*ASREHR
Trigger: CCTGTGTTCCCGGGATGCCAAAAGCAGGCAACTTCG...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CAA 90 bp ATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAAACTTAGCATCTGTTTaGTACTGTTCCAGCACGGGG +
Preference number: 5 (lower is better)
Translates to: MHLVQETIWVAFSGVNRVNLASV*YCSSTG
Trigger: CCCCGTGCTGGAACAGTACAAAACAGATGCTAAGTT...TACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp TTTTGTACCAGAACTATTCTAGGTGCTGAGAATACAAAGGTGAACAGGGAGGCACTGCTGAGTCTTAGGTaGTTTCGGCCAAAACTTAGG +
Preference number: 5 (lower is better)
Translates to: FCTRTILGAENTKVNREALLSLR*FRPKLR
Trigger: CCTAAGTTTTGGCCGAAACAACCTAAGACTCAGCAG...TGCCTCCCTGTTCACCTTTGTATTCTCAGCACCTAGAATAGTTCTGGTACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS TCA 90 bp CCTTTAACCAAATCGGTCTGTGTGCGTCGTGCAAGCATGCCATGTTaGTTCATGTCTTTTTATGTCGCTCATTTCATTTTTCCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: PLTKSVCVRRASMPC*FMSFYVAHFIFPAW
Trigger: CCAAGCAGGAAAAATGAAATGAGCGACATAAAAAGACATGAATCAACATGGCATGCTTGCACGACGCACACAGACCGATTTGGTTAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000468901.1
CDS-3UTR CAA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGCGGGTTCCAGATGTCTaGACTGTAACTGGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: KMLARDLKMTVQHRIRELRVPDV*TVTGPV
Trigger: CACAGGCCCAGTTACAGTCAAGACATCTGGAACCCG...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CAA 90 bp CCAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTCACTTGAAAGGAAGGTaGTATGTCCTTGATTCAGCC +
Preference number: 5 (lower is better)
Translates to: PALHHLQGILVKLADDNIHLKGR*YVLDSA
Trigger: GGCTGAATCAAGGACATACAACCTTCCTTTCAAGTG...AATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CAA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGATACTCCAGGCTTCGTaGGGCAAGCACTCTCCCCAT +
Preference number: 5 (lower is better)
Translates to: KMLARDLKMTVQHRIRELILQAS*GKHSPH
Trigger: ATGGGGAGAGTGCTTGCCCAACGAAGCCTGGAGTAT...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CAA 90 bp TTCGGCCAAAACTTAGGACAGAATTTGTACCGGAGGTTAAAAGCTTCTGGCTCTTGGCTGATGACAATATaGCCTGCATTCTGGTTAGTT +
Preference number: 5 (lower is better)
Translates to: FGQNLGQNLYRRLKASGSWLMTI*PAFWLV
Trigger: AACTAACCAGAATGCAGGCAATATTGTCATCAGCCA...AGAGCCAGAAGCTTTTAACCTCCGGTACAAATTCTGTCCTAAGTTTTGGCCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CAA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGCCTTTCCCTCGTCAGTaGCACTTTCTGCCTGCCAGT +
Preference number: 5 (lower is better)
Translates to: KMLARDLKMTVQHRIRELPFPRQ*HFLPAS
Trigger: ACTGGCAGGCAGAAAGTGCAACTGACGAGGGAAAGG...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGAGGAGGTTGAGAAGGTaGGACGTCGCCTGCATTCTG +
Preference number: 5 (lower is better)
Translates to: KMLARDLKMTVQHRIRELRRLRR*DVACIL
Trigger: CAGAATGCAGGCGACGTCCAACCTTCTCAACCTCCT...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp GTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAACTCAGTTGCAATCTGCCGAAATTTaGCCTTCAGCCCTTTCATTT +
Preference number: 5 (lower is better)
Translates to: VQETIWVAFSGVNRVTQLQSAEI*PSALSF
Trigger: AAATGAAAGGGCTGAAGGCAAAATTTCGGCAGATTG...CAACTGAGTTACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp ATGGTGCTTGAATCTAATCCAGCCTTGCATCTCTATGGCAAAGGGATACTGCTGATGTACCAGACTCTGTaGTTTTTCTCAGATGCTAAA +
Preference number: 5 (lower is better)
Translates to: MVLESNPALHLYGKGILLMYQTL*FFSDAK
Trigger: TTTAGCATCTGAGAAAAACAACAGAGTCTGGTACAT...CAGCAGTATCCCTTTGCCATAGAGATGCAAGGCTGGATTAGATTCAAGCACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CAA 90 bp ATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTATATTTTGCACAAATCTaGCCAATAACTCCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: MHLVQETIWVAFSGVNRVYFAQI*PITPQG
Trigger: GCCCTGAGGAGTTATTGGCAAGATTTGTGCAAAATA...TACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGCCGGGAACACAGGTTTaGTTCTGGAGCAACAACTGT +
Preference number: 5 (lower is better)
Translates to: KMLARDLKMTVQHRIRELPGTQV*FWSNNC
Trigger: ACAGTTGTTGCTCCAGAACAAAACCTGTGTTCCCGG...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CAA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGTGCAGTCACGAAGTCTaGTTTCCAAGCTCAGCACTC +
Preference number: 5 (lower is better)
Translates to: KMLARDLKMTVQHRIRELCSHEV*FPSSAL
Trigger: GAGTGCTGAGCTTGGAAACAAGACTTCGTGACTGCA...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CAA 90 bp AATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGTTAGTTCCTGCCCACTaGAAAGGAAGGTTGTATGTC +
Preference number: 5 (lower is better)
Translates to: NIWNPDAPCARNYMGCIQLVPAH*KGRLYV
Trigger: GACATACAACCTTCCTTTCAAGTGGGCAGGAACTAA...CTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGCCAGTTAAGTGGGAGTaGGTGACATACAGTGTCCCA +
Preference number: 5 (lower is better)
Translates to: KMLARDLKMTVQHRIRELPVKWE*VTYSVP
Trigger: TGGGACACTGTATGTCACCAACTCCCACTTAACTGG...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CAA 90 bp CCAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTAGACTGAAGCATGATTaGTACAAAGCAAGAAGACAC +
Preference number: 5 (lower is better)
Translates to: PALHHLQGILVKLADDNIRLKHD*YKARRH
Trigger: GTGTCTTCTTGCTTTGTACAAATCATGCTTCAGTCT...AATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CAA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGAACTTAGCATCTGTTTaGTACTGTTCCAGCACGGGG +
Preference number: 5 (lower is better)
Translates to: KMLARDLKMTVQHRIRELNLASV*YCSSTG
Trigger: CCCCGTGCTGGAACAGTACAAAACAGATGCTAAGTT...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CAA 90 bp AGGTTGTTTCGGCCAAAACTTAGGACAGAATTTGTACCGGAGGTTAAAAGCTTCTTCCTTATTTCCTCCTaGAACTGGGTGATTAACTTA +
Preference number: 5 (lower is better)
Translates to: RLFRPKLRTEFVPEVKSFFLISS*NWVINL
Trigger: TAAGTTAATCACCCAGTTCAAGGAGGAAATAAGGAA...GAAGCTTTTAACCTCCGGTACAAATTCTGTCCTAAGTTTTGGCCGAAACAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CAA 90 bp ATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAATGTACCAGACTCTGTaGTTTTTCTCAGATGCTAAA +
Preference number: 5 (lower is better)
Translates to: MHLVQETIWVAFSGVNRVMYQTL*FFSDAK
Trigger: TTTAGCATCTGAGAAAAACAACAGAGTCTGGTACAT...TACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp AGTCAACTCAAATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATCACTTGAAAGGAAGGTaGTATGTCCTTGATTCAGCC +
Preference number: 5 (lower is better)
Translates to: SQLKSNIWNPDAPCARNYHLKGR*YVLDSA
Trigger: GGCTGAATCAAGGACATACAACCTTCCTTTCAAGTG...ATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGATTTGAGTTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp AATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGTGGCTGATGACAATATaGCCTGCATTCTGGTTAGTT +
Preference number: 5 (lower is better)
Translates to: NIWNPDAPCARNYMGCIQWLMTI*PAFWLV
Trigger: AACTAACCAGAATGCAGGCAATATTGTCATCAGCCA...CTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGCACCTCCAAGGTATCTaGGTTAAGTTGGCTGATGAC +
Preference number: 5 (lower is better)
Translates to: KMLARDLKMTVQHRIRELHLQGI*VKLADD
Trigger: GTCATCAGCCAACTTAACCAAGATACCTTGGAGGTG...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CAA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGAGAGAGCTCGATCTCTaGCATTGTAGTCAAGCATGG +
Preference number: 5 (lower is better)
Translates to: KMLARDLKMTVQHRIRELRELDL*HCSQAW
Trigger: CCATGCTTGACTACAATGCAAGAGATCGAGCTCTCT...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CAA 90 bp GTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAACTCAGTTGAACAGAGTAACTCAGTaGTATGAAATCAGTTGTTGC +
Preference number: 5 (lower is better)
Translates to: VQETIWVAFSGVNRVTQLNRVTQ*YEISCC
Trigger: GCAACAACTGATTTCATACAACTGAGTTACTCTGTT...CAACTGAGTTACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp AGTCAACTCAAATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATGAATCCAGATGCACCTaGTGCAAGAAACTATATGGG +
Preference number: 5 (lower is better)
Translates to: SQLKSNIWNPDAPCARNYESRCT*CKKLYG
Trigger: CCCATATAGTTTCTTGCACAAGGTGCATCTGGATTC...ATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGATTTGAGTTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp GTGCAAGAAACTATATGGGTTGCATTCAGTGGAGTGAACAGAGTAACTCAGTTGTTGACAGTGAGATATTaGAGGATGATGCTTTACTTG +
Preference number: 5 (lower is better)
Translates to: VQETIWVAFSGVNRVTQLLTVRY*RMMLYL
Trigger: CAAGTAAAGCATCATCCTCAAATATCTCACTGTCAA...CAACTGAGTTACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp CAGCTCTTCATCACCTCCAAGGTATCTTGGTTAAGTTGGCTGATGACAATATTGCTTCCCAAAATACTATaGCTTATGCTTCTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: QLFITSKVSWLSWLMTILLPKIL*LMLLLS
Trigger: AGAAAGGAGAAGCATAAGCAATAGTATTTTGGGAAG...CAATATTGTCATCAGCCAACTTAACCAAGATACCTTGGAGGTGATGAAGAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536598.1
CDS-3UTR CAA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGCACTTGAAAGGAAGGTaGTATGTCCTTGATTCAGCC +
Preference number: 5 (lower is better)
Translates to: KMLARDLKMTVQHRIRELHLKGR*YVLDSA
Trigger: GGCTGAATCAAGGACATACAACCTTCCTTTCAAGTG...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CAA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGTTAGTTCCTGCCCACTaGAAAGGAAGGTTGTATGTC +
Preference number: 5 (lower is better)
Translates to: KMLARDLKMTVQHRIRELLVPAH*KGRLYV
Trigger: GACATACAACCTTCCTTTCAAGTGGGCAGGAACTAA...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CAA 90 bp ATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATGGATATGTGAAAGTATaGGTTATGGAAGGGAATGTC +
Preference number: 5 (lower is better)
Translates to: IQYLESRCTLCKKLYGLHGYVKV*VMEGNV
Trigger: GACATTCCCTTCCATAACCAATACTTTCACATATCC...ATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp AGTCAACTCAAATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATGAAAACATGTCACATTaGCCTATGTGTCATCCTCTG +
Preference number: 5 (lower is better)
Translates to: SQLKSNIWNPDAPCARNYENMSH*PMCHPL
Trigger: CAGAGGATGACACATAGGCAAATGTGACATGTTTTC...ATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGATTTGAGTTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp AATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGACTCAAATCCAATATTaGGAATCCAGATGCACCTTG +
Preference number: 5 (lower is better)
Translates to: NIWNPDAPCARNYMGCIQTQIQY*ESRCTL
Trigger: CAAGGTGCATCTGGATTCCAAATATTGGATTTGAGT...CTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGCAATCTGCCGAAATTTaGCCTTCAGCCCTTTCATTT +
Preference number: 5 (lower is better)
Translates to: KMLARDLKMTVQHRIRELQSAEI*PSALSF
Trigger: AAATGAAAGGGCTGAAGGCAAAATTTCGGCAGATTG...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CAA 90 bp AATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATATGGGTTGCATTCAGGTGATTTTCATCAGTTaGCCACATGTTAGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: NIWNPDAPCARNYMGCIQVIFIS*PHVSFF
Trigger: GAAAAAGCTAACATGTGGCAAACTGATGAAAATCAC...CTGAATGCAACCCATATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGTGGCTGATGACAATATaGCCTGCATTCTGGTTAGTT +
Preference number: 5 (lower is better)
Translates to: KMLARDLKMTVQHRIRELWLMTI*PAFWLV
Trigger: AACTAACCAGAATGCAGGCAATATTGTCATCAGCCA...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CAA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGGAAAACATGTCACATTaGCCTATGTGTCATCCTCTG +
Preference number: 5 (lower is better)
Translates to: KMLARDLKMTVQHRIRELENMSH*PMCHPL
Trigger: CAGAGGATGACACATAGGCAAATGTGACATGTTTTC...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CAA 90 bp AGTCAACTCAAATCCAATATTTGGAATCCAGATGCACCTTGTGCAAGAAACTATTTCCTTATTTCCTCCTaGAACTGGGTGATTAACTTA +
Preference number: 5 (lower is better)
Translates to: SQLKSNIWNPDAPCARNYFLISS*NWVINL
Trigger: TAAGTTAATCACCCAGTTCAAGGAGGAAATAAGGAA...ATAGTTTCTTGCACAAGGTGCATCTGGATTCCAAATATTGGATTTGAGTTGACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS-3UTR CAA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGGGATATGTGAAAGTATaGGTTATGGAAGGGAATGTC +
Preference number: 5 (lower is better)
Translates to: KMLARDLKMTVQHRIRELGYVKV*VMEGNV
Trigger: GACATTCCCTTCCATAACCAATACTTTCACATATCC...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CAA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGTTCCTTATTTCCTCCTaGAACTGGGTGATTAACTTA +
Preference number: 5 (lower is better)
Translates to: KMLARDLKMTVQHRIRELFLISS*NWVINL
Trigger: TAAGTTAATCACCCAGTTCAAGGAGGAAATAAGGAA...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS-3UTR CAA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGGTGATTTTCATCAGTTaGCCACATGTTAGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: KMLARDLKMTVQHRIRELVIFIS*PHVSFF
Trigger: GAAAAAGCTAACATGTGGCAAACTGATGAAAATCAC...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000338858.9
ENST00000370103.9
CDS-3UTR CAA 90 bp AAAATGTTAGCAAGAGATTTAAAAATGACTGTACAGCACCGCATCAGAGAATTGATGTACCAGACTCTGTaGTTTTTCTCAGATGCTAAA +
Preference number: 5 (lower is better)
Translates to: KMLARDLKMTVQHRIRELMYQTL*FFSDAK
Trigger: TTTAGCATCTGAGAAAAACAACAGAGTCTGGTACAT...CAATTCTCTGATGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000536598.1
CDS CCA 72 bp CCTGCTTTTGGCATCCCGGGAACACAGGTTTTGTTCTaGAGCAACAACTGTGCAAATGCACCGCCCATCAGG +
Preference number: 6 (lower is better)
Translates to: PAFGIPGTQVLF*SNNCANAPPIR
Trigger: CCTGATGGGCGGTGCATTTGCACAGTTGTTGCTCCAGAACAAAACCTGTGTTCCCGGGATGCCAAAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000462354.5
ENST00000465523.5
ENST00000468901.1
ENST00000536598.1
CDS CAA 72 bp AAGTTGCCTGCTTTTGGCATCCCGGGAACACAGGTTTaGTTCTGGAGCAACAACTGTGCAAATGCACCGCCC +
Preference number: 6 (lower is better)
Translates to: KLPAFGIPGTQV*FWSNNCANAPP
Trigger: GGGCGGTGCATTTGCACAGTTGTTGCTCCAGAACAAAACCTGTGTTCCCGGGATGCCAAAAGCAGGCAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000462354.5
ENST00000465523.5
ENST00000468901.1
ENST00000536598.1
CDS GCA 72 bp AACACAGGTTTTGTTCTGGAGCAACAACTGTGCAAATaGACCGCCCATCAGGATCCTGAGCTGAGCTGTACA +
Preference number: 6 (lower is better)
Translates to: NTGFVLEQQLCK*TAHQDPELSCT
Trigger: TGTACAGCTCAGCTCAGGATCCTGATGGGCGGTGCATTTGCACAGTTGTTGCTCCAGAACAAAACCTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000462354.5
ENST00000465523.5
ENST00000468901.1
ENST00000536598.1
CDS GCA 72 bp CCTCTTTACTCTCTTTTATGTAGGCTCTCCACTCACTaGAGAGACCTTTCCCTCGTCAGTTGCACTTTCTGC +
Preference number: 6 (lower is better)
Translates to: PLYSLLCRLSTH*RDLSLVSCTFC
Trigger: GCAGAAAGTGCAACTGACGAGGGAAAGGTCTCTGCAGTGAGTGGAGAGCCTACATAAAAGAGAGTAAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370103.9
CDS CAA 72 bp TGCCACATGTTAGCTTTTTCATGCAGTCACGAAGTCTaGTTTCCAAGCTCAGCACTCTTTGGTGTAGTTCCT +
Preference number: 6 (lower is better)
Translates to: CHMLAFSCSHEV*FPSSALFGVVP
Trigger: AGGAACTACACCAAAGAGTGCTGAGCTTGGAAACAAGACTTCGTGACTGCATGAAAAAGCTAACATGTGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338858.9
ENST00000370103.9
CDS CAA 90 bp TCATCAGTTTGCCACATGTTAGCTTTTTCATGCAGTCACGAAGTCTaGTTTCCAAGCTCAGCACTCTTTGGTGTAGTTCCTCGTAGTCAT +
Preference number: 6 (lower is better)
Translates to: SSVCHMLAFSCSHEV*FPSSALFGVVPRSH
Trigger: ATGACTACGAGGAACTACACCAAAGAGTGCTGAGCTTGGAAACAAGACTTCGTGACTGCATGAAAAAGCTAACATGTGGCAAACTGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338858.9
ENST00000370103.9
CDS CAA 72 bp CCAGTGAGGACAGCAGACAGATTCCTTATTTCCTCCTaGAACTGGGTGATTAACTTAGCATCTGTTTTGTAC +
Preference number: 6 (lower is better)
Translates to: PVRTADRFLISS*NWVINLASVLY
Trigger: GTACAAAACAGATGCTAAGTTAATCACCCAGTTCAAGGAGGAAATAAGGAATCTGTCTGCTGTCCTCACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338858.9
ENST00000370103.9
ENST00000462354.5
ENST00000465523.5
ENST00000468901.1
ENST00000536598.1
CDS CAA 90 bp ACCTTTAACCAAATCGGTCTGTGTGCGTCGTGCAAGCATGCCATGTaGATTCATGTCTTTTTATGTCGCTCATTTCATTTTTCCTGCTTG +
Preference number: 6 (lower is better)
Translates to: TFNQIGLCASCKHAM*IHVFLCRSFHFSCL
Trigger: CAAGCAGGAAAAATGAAATGAGCGACATAAAAAGACATGAATCAACATGGCATGCTTGCACGACGCACACAGACCGATTTGGTTAAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000468901.1
CDS GCA 72 bp ACAGAAACCTTTAACCAAATCGGTCTGTGTGCGTCGTaGAAGCATGCCATGTTGATTCATGTCTTTTTATGT +
Preference number: 6 (lower is better)
Translates to: TETFNQIGLCAS*KHAMLIHVFLC
Trigger: ACATAAAAAGACATGAATCAACATGGCATGCTTGCACGACGCACACAGACCGATTTGGTTAAAGGTTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468901.1
CDS CAA 72 bp TTAAATCAATTAGCTTTTTCATGCAGTCACGAAGTCTaGTTTCCAAGCTCAGCACTCTTTGGTGTAGTTCCT +
Preference number: 6 (lower is better)
Translates to: LNQLAFSCSHEV*FPSSALFGVVP
Trigger: AGGAACTACACCAAAGAGTGCTGAGCTTGGAAACAAGACTTCGTGACTGCATGAAAAAGCTAATTGATTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462354.5
ENST00000465523.5
ENST00000536598.1