RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000130558

Ensembl transcript IDs: ENST00000252854.8, ENST00000277415.15, ENST00000339720.10, ENST00000371793.8, ENST00000371796.7, ENST00000371799.8, ENST00000371801.4, ENST00000392991.8, ENST00000483042.1, ENST00000539529.5, ENST00000539877.5, ENST00000545657.1

Found 553 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATCTTTTGGCCTGGGCATGGAGGCTTCAGGGTGCCATTAAGGCTTaGAGGGCCCTTGGGTGCGGCCATGTCCAGGACCACCCAGAATCA +
Preference number: 1 (lower is better)
Translates to: HLLAWAWRLQGAIKA*RALGCGHVQDHPES
Trigger: TGATTCTGGGTGGTCCTGGACATGGCCGCACCCAAGGGCCCTCCAAGCCTTAATGGCACCCTGAAGCCTCCATGCCCAGGCCAAAAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371799.8
3UTR CCA 90 bp GGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTCCGACGTCTGTaGCCCGCCGGCTCGAAAGGGAGAAACACGGAGGTAATGCCATCC +
Preference number: 1 (lower is better)
Translates to: GCSSSCKYGSFFRRL*PAGSKGRNTEVMPS
Trigger: GGATGGCATTACCTCCGTGTTTCTCCCTTTCGAGCCGGCGGGCCACAGACGTCGGAAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR GCA 90 bp TTGGGTGCGGCCATGTCCAGGACCACCCAGAATCAGCCATCTCTTTaGCAAGGTGTCTCAATAAGACACAGGCATAGCCCTTTGTGGGGC +
Preference number: 1 (lower is better)
Translates to: LGAAMSRTTQNQPSL*QGVSIRHRHSPLWG
Trigger: GCCCCACAAAGGGCTATGCCTGTGTCTTATTGAGACACCTTGGCAAAGAGATGGCTGATTCTGGGTGGTCCTGGACATGGCCGCACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371799.8
3UTR GCA 90 bp AGCACGGTTAATCTAAGAGACAGCAACACAGTCAAGAAACGGCACTaGAATGGGATGCGAGTTACACTAGCCTACGGCCGGGTGCAGCCC +
Preference number: 1 (lower is better)
Translates to: STVNLRDSNTVKKRH*NGMRVTLAYGRVQP
Trigger: GGGCTGCACCCGGCCGTAGGCTAGTGTAACTCGCATCCCATTGCAGTGCCGTTTCTTGACTGTGTTGCTGTCTCTTAGATTAACCGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR TCA 90 bp GACCTTTCTCTATTGATACATTGTTCAGGGTACGACAAGCCCGTTTaGAATGCCCACGATCCCCACACCAGCACGCCACAGGGCTCCTCA +
Preference number: 1 (lower is better)
Translates to: DLSLLIHCSGYDKPV*NAHDPHTSTPQGSS
Trigger: TGAGGAGCCCTGTGGCGTGCTGGTGTGGGGATCGTGGGCATTTCAAACGGGCTTGTCGTACCCTGAACAATGTATCAATAGAGAAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371801.4
3UTR GCA 90 bp TTCTCTATTGATACATTGTTCAGGGTACGACAAGCCCGTTTGAAATaGCCACGATCCCCACACCAGCACGCCACAGGGCTCCTCACTCAC +
Preference number: 1 (lower is better)
Translates to: FSIDTLFRVRQARLK*PRSPHQHATGLLTH
Trigger: GTGAGTGAGGAGCCCTGTGGCGTGCTGGTGTGGGGATCGTGGGCATTTCAAACGGGCTTGTCGTACCCTGAACAATGTATCAATAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371801.4
3UTR GCA 90 bp GACGCCACATTCCTCGGAGCTGACCACGATCTAAGGAAATGTTCATaGCATCCTAACAGTGGGTTTTTCCCCGGTGAGAACTGGCCAACA +
Preference number: 1 (lower is better)
Translates to: DATFLGADHDLRKCS*HPNSGFFPGENWPT
Trigger: TGTTGGCCAGTTCTCACCGGGGAAAAACCCACTGTTAGGATGGCATGAACATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGTGGCGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR CCA 90 bp GAACGTTGCACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTaGGCACAGCAACTTCACTCTACACACTCTGACCATCGCTTCAGT +
Preference number: 1 (lower is better)
Translates to: ERCTMYLRGTRVQTM*AQQLHSTHSDHRFS
Trigger: ACTGAAGCGATGGTCAGAGTGTGTAGAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTGCAACGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR GCA 90 bp CTGAACATACGAAGTTACCACCTCAAGGGAATAACAGAAGAACGTTaGACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCA +
Preference number: 1 (lower is better)
Translates to: LNIRSYHLKGITEER*TMYLRGTRVQTMWA
Trigger: TGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTGCAACGTTCTTCTGTTATTCCCTTGAGGTGGTAACTTCGTATGTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR CCA 90 bp GATGATTTTTCAAGATCGGTATTGTTAGTGTTATTGGTATCTTTTTaGCAGCAGTTTCACAGGAGTCCCTTTGTGGTGAGGACGTGGGCC +
Preference number: 1 (lower is better)
Translates to: DDFSRSVLLVLLVSF*QQFHRSPFVVRTWA
Trigger: GGCCCACGTCCTCACCACAAAGGGACTCCTGTGAAACTGCTGCCAAAAAGATACCAATAACACTAACAATACCGATCTTGAAAAATCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR CAA 90 bp CCTGGGCATGGAGGCTTCAGGGTGCCATTAAGGCTTGGAGGGCCCTaGGGTGCGGCCATGTCCAGGACCACCCAGAATCAGCCATCTCTT +
Preference number: 2 (lower is better)
Translates to: PGHGGFRVPLRLGGP*GAAMSRTTQNQPSL
Trigger: AAGAGATGGCTGATTCTGGGTGGTCCTGGACATGGCCGCACCCAAGGGCCCTCCAAGCCTTAATGGCACCCTGAAGCCTCCATGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371799.8
3UTR-3UTR TCA 90 bp CCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTGGAGTCCCTTTGTGGTaGGGACGTGGGCCCTTGGCT +
Preference number: 2 (lower is better)
Translates to: PVPSETRVSPGEPFLSAVGVPLW*GRGPLA
Trigger: AGCCAAGGGCCCACGTCCTCACCACAAAGGGACTCC...AACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTCTGGTTTCCGATGGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CCA 90 bp CCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTTTCTTCCGACGTCTGTaGCCCGCCGGCTCGAAAGGG +
Preference number: 2 (lower is better)
Translates to: PVPSETRVSPGEPFLSAVFFRRL*PAGSKG
Trigger: CCCTTTCGAGCCGGCGGGCCACAGACGTCGGAAGAA...AACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTCTGGTTTCCGATGGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CCA 90 bp GTAGTGGTACATGTTGTTGTAACCGGCATAGTCCAGGCTGCGGGTCTTGAGGATGTGCCCGACCAGGGGTaGGGGAGACGGTGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: VVVHVVVTGIVQAAGLEDVPDQG*GRRWEV
Trigger: CACCTCCCACCGTCTCCCCCACCCCTGGTCGGGCAC...ATCCTCAAGACCCGCAGCCTGGACTATGCCGGTTACAACAACATGTACCACTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545657.1
3UTR-3UTR CCA 90 bp ACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAAAACCGGGGCGCCGTaGGCTGCAGTTCCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: TVARMTFLSHRKPEFPQAKTGAP*AAVPAA
Trigger: TGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTT...CGCCTGGGGAAACTCTGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR TCA 90 bp CTGGACGCCACATTCCTCGGAGCTGACCACGATCTAAGGAAATGTTCATGCCATGGAGTCCCTTTGTGGTaGGGACGTGGGCCCTTGGCT +
Preference number: 2 (lower is better)
Translates to: LDATFLGADHDLRKCSCHGVPLW*GRGPLA
Trigger: AGCCAAGGGCCCACGTCCTCACCACAAAGGGACTCC...ATGGCATGAACATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGTGGCGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR TCA 90 bp GCGCTTGGGGTAGCTCGTGTTCCAGGTCTGCAGGGTCTGCAGGGACACGGGGTCAATTGTCCGTGTTCATaGAGTCAACCATGGACTTGT +
Preference number: 2 (lower is better)
Translates to: ALGVARVPGLQGLQGHGVNCPCS*SQPWTC
Trigger: ACAAGTCCATGGTTGACTTCATGAACACGGACAATT...GACCCCGTGTCCCTGCAGACCCTGCAGACCTGGAACACGAGCTACCCCAAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545657.1
3UTR-3UTR CCA 90 bp CTGGACGCCACATTCCTCGGAGCTGACCACGATCTAAGGAAATGTTCATGCCATTTCTTCCGACGTCTGTaGCCCGCCGGCTCGAAAGGG +
Preference number: 2 (lower is better)
Translates to: LDATFLGADHDLRKCSCHFFRRL*PAGSKG
Trigger: CCCTTTCGAGCCGGCGGGCCACAGACGTCGGAAGAA...ATGGCATGAACATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGTGGCGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CCA 90 bp CCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTGGTCCAGGAGCTATGTaGAGCCTCAGCACGGTTAAT +
Preference number: 2 (lower is better)
Translates to: PVPSETRVSPGEPFLSAVGPGAM*SLSTVN
Trigger: ATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACC...AACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTCTGGTTTCCGATGGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CCA 90 bp GTCCAGGCTGCGGGTCTTGAGGATGGTCTCTGTCTTCAGGTCAAACCTGATGATGGGTGGGGGAGACGGTaGGAGGTGAAATTGTCCGTG +
Preference number: 2 (lower is better)
Translates to: VQAAGLEDGLCLQVKPDDGWGRR*EVKLSV
Trigger: CACGGACAATTTCACCTCCCACCGTCTCCCCCACCC...ATCATCAGGTTTGACCTGAAGACAGAGACCATCCTCAAGACCCGCAGCCTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545657.1
3UTR-3UTR CCA 90 bp CCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTGAAACGGCACTGCAATaGGATGCGAGTTACACTAGC +
Preference number: 2 (lower is better)
Translates to: PVPSETRVSPGEPFLSAVETALQ*DASYTS
Trigger: GCTAGTGTAACTCGCATCCCATTGCAGTGCCGTTTC...AACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTCTGGTTTCCGATGGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR GCA 90 bp CCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTCTGGCCAACAGTCATTaGCTCGCCTCTTTAGTATGT +
Preference number: 2 (lower is better)
Translates to: PVPSETRVSPGEPFLSAVLANSH*LASLVC
Trigger: ACATACTAAAGAGGCGAGGCAATGACTGTTGGCCAG...AACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTCTGGTTTCCGATGGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CCA 90 bp ATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCTAAAACCGGGGCGCCGTaGGCTGCAGTTCCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: MYLRGTRVQTMWAQQLHSKTGAP*AAVPAA
Trigger: TGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTT...AGAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CCA 90 bp ACGTACTTTCCGCATACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCATTTGTGGTGAGGACGTaGGCCCTTGGCTTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: TYFPHTVARMTFLSHRKPFVVRT*ALGFQE
Trigger: CTCCTGGAAGCCAAGGGCCCACGTCCTCACCACAAA...TGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGTATGCGGAAAGTACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CCA 90 bp CCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTCGAGTTCAAACAATGTaGGCACAGCAACTTCACTCT +
Preference number: 2 (lower is better)
Translates to: PVPSETRVSPGEPFLSAVRVQTM*AQQLHS
Trigger: AGAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCG...AACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTCTGGTTTCCGATGGGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR GCA 90 bp AGTTACCACCTCAAGGGAATAACAGAAGAACGTTGCACAATGTATCTACGGGGTCGGGGCGCCGTGGGCTaGAGTTCCAGCTGCAAATAC +
Preference number: 2 (lower is better)
Translates to: SYHLKGITEERCTMYLRGRGAVG*SSSCKY
Trigger: GTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCG...ACCCCGTAGATACATTGTGCAACGTTCTTCTGTTATTCCCTTGAGGTGGTAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CCA 90 bp TATGTACTAGACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTAATCTATTTGTGGTGAGGACGTaGGCCCTTGGCTTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: YVLDTGPGAMWSLSTVNLFVVRT*ALGFQE
Trigger: CTCCTGGAAGCCAAGGGCCCACGTCCTCACCACAAA...TAGATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTCTAGTACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CCA 90 bp GCACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCTTCCCCGGTGAGAACTaGCCAACAGTCATTGCCTCG +
Preference number: 2 (lower is better)
Translates to: AQCIYGVREFKQCGHSNFFPGEN*PTVIAS
Trigger: CGAGGCAATGACTGTTGGCCAGTTCTCACCGGGGAA...GAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CCA 90 bp TGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCTAGGCTCTCAAAGAGCCTaGACGCCACATTCCTCGGAG +
Preference number: 2 (lower is better)
Translates to: CIYGVREFKQCGHSNFTLGSQRA*TPHSSE
Trigger: CTCCGAGGAATGTGGCGTCCAGGCTCTTTGAGAGCC...TAGAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR CAA 90 bp ATCCTAACAGTGGGTTTTTCCCCGGTGAGAACTGGCCAACAGTCATaGCCTCGCCTCTTTAGTATGTTGTTTGACCAGAGAGGGACAGGG +
Preference number: 2 (lower is better)
Translates to: ILTVGFSPVRTGQQS*PRLFSMLFDQRGTG
Trigger: CCCTGTCCCTCTCTGGTCAAACAACATACTAAAGAGGCGAGGCAATGACTGTTGGCCAGTTCTCACCGGGGAAAAACCCACTGTTAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR GCA 90 bp CTGGACGCCACATTCCTCGGAGCTGACCACGATCTAAGGAAATGTTCATGCCATGGCTGCAGTTCCAGCTaGAAATACGGGAGTTTCTTC +
Preference number: 2 (lower is better)
Translates to: LDATFLGADHDLRKCSCHGCSSS*KYGSFF
Trigger: GAAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCC...ATGGCATGAACATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGTGGCGTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR GCA 90 bp GACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTAATCTAAGAGACAGCGTCAAGAAACGGCACTaGAATGGGATGCGAGTTACA +
Preference number: 2 (lower is better)
Translates to: DTGPGAMWSLSTVNLRDSVKKRH*NGMRVT
Trigger: TGTAACTCGCATCCCATTGCAGTGCCGTTTCTTGAC...GCTGTCTCTTAGATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CCA 90 bp TTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTAACATTTGTGGTGAGGACGTaGGCCCTTGGCTTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: FPQASPSYLRLHDLANLTFVVRT*ALGFQE
Trigger: CTCCTGGAAGCCAAGGGCCCACGTCCTCACCACAAA...TGTTAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CCA 90 bp AAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTCCTTATTGGTATCTTTTTaGCAGCAGTTTCACAGGAGT +
Preference number: 2 (lower is better)
Translates to: KTGAPWAAVPAANTGVSSLLVSF*QQFHRS
Trigger: ACTCCTGTGAAACTGCTGCCAAAAAGATACCAATAA...GGAAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CCA 90 bp ACATTCCTCGGAGCTGACCACGATCTAAGGAAATGTTCATGCCATCCTAACAGTTTCCCCGGTGAGAACTaGCCAACAGTCATTGCCTCG +
Preference number: 2 (lower is better)
Translates to: TFLGADHDLRKCSCHPNSFPGEN*PTVIAS
Trigger: CGAGGCAATGACTGTTGGCCAGTTCTCACCGGGGAA...ACTGTTAGGATGGCATGAACATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR TCA 90 bp CACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACACATTCCTCGGAGCTaGCCACGATCTAAGGAAATG +
Preference number: 2 (lower is better)
Translates to: HNVSTGYASSNNVGTATSHIPRS*PRSKEM
Trigger: CATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGTG...TGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR GCA 90 bp ACGTACTTTCCGCATACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAGTCAAGAAACGGCACTaGAATGGGATGCGAGTTACA +
Preference number: 2 (lower is better)
Translates to: TYFPHTVARMTFLSHRKPVKKRH*NGMRVT
Trigger: TGTAACTCGCATCCCATTGCAGTGCCGTTTCTTGAC...TGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGTATGCGGAAAGTACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR GCA 90 bp GCACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCGTCAAGAAACGGCACTaGAATGGGATGCGAGTTACA +
Preference number: 2 (lower is better)
Translates to: AQCIYGVREFKQCGHSNFVKKRH*NGMRVT
Trigger: TGTAACTCGCATCCCATTGCAGTGCCGTTTCTTGAC...GAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR GCA 90 bp ACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGATAACAGAAGAACGTTaGACAATGTATCTACGGGGT +
Preference number: 2 (lower is better)
Translates to: TVARMTFLSHRKPEFPQAITEER*TMYLRG
Trigger: ACCCCGTAGATACATTGTGCAACGTTCTTCTGTTAT...CGCCTGGGGAAACTCTGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR GCA 90 bp GCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTGTATTCAAGGTTCCTTAGTTACATGGGAGTGGACTaGTTCTTCAGTCACTGCAGC +
Preference number: 2 (lower is better)
Translates to: AATVACKGGSWLYSRFLSYMGVD*FFSHCS
Trigger: GCTGCAGTGACTGAAGAAGCAGTCCACTCCCATGTA...ACTAAGGAACCTTGAATACAACCAGGATCCTCCTTTGCATGCGACTGTAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
3UTR-3UTR GCA 90 bp GAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTAGGCTGCAGTTCCAGCTaGAAATACGGGAGTTTCTTC +
Preference number: 2 (lower is better)
Translates to: EFPQASPSYLRLHDLANLGCSSS*KYGSFF
Trigger: GAAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCC...TAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CCA 90 bp TTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTAACAGGTCCAGGAGCTATGTaGAGCCTCAGCACGGTTAAT +
Preference number: 2 (lower is better)
Translates to: FPQASPSYLRLHDLANLTGPGAM*SLSTVN
Trigger: ATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACC...TGTTAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR TCA 90 bp CACTTATTAATCCAAACTACGGCATTGCATTTACAACAATCATCGCATAAACTGGGAGTCCCTTTGTGGTaGGGACGTGGGCCCTTGGCT +
Preference number: 2 (lower is better)
Translates to: HLLIQTTALHLQQSSHKLGVPLW*GRGPLA
Trigger: AGCCAAGGGCCCACGTCCTCACCACAAAGGGACTCC...CAGTTTATGCGATGATTGTTGTAAATGCAATGCCGTAGTTTGGATTAATAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CCA 90 bp TTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTAACAGAAACGGCACTGCAATaGGATGCGAGTTACACTAGC +
Preference number: 2 (lower is better)
Translates to: FPQASPSYLRLHDLANLTETALQ*DASYTS
Trigger: GCTAGTGTAACTCGCATCCCATTGCAGTGCCGTTTC...TGTTAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CCA 90 bp AGTTACCACCTCAAGGGAATAACAGAAGAACGTTGCACAATGTATCTACGGGGTGAAACGGCACTGCAATaGGATGCGAGTTACACTAGC +
Preference number: 2 (lower is better)
Translates to: SYHLKGITEERCTMYLRGETALQ*DASYTS
Trigger: GCTAGTGTAACTCGCATCCCATTGCAGTGCCGTTTC...ACCCCGTAGATACATTGTGCAACGTTCTTCTGTTATTCCCTTGAGGTGGTAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR CAA 90 bp ACTGAACATACGAAGTTACCACCTCAAGGGAATAACAGAAGAACGTaGCACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGC +
Preference number: 2 (lower is better)
Translates to: TEHTKLPPQGNNRRT*HNVSTGYASSNNVG
Trigger: GCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTGCAACGTTCTTCTGTTATTCCCTTGAGGTGGTAACTTCGTATGTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR GCA 90 bp AGTTACCACCTCAAGGGAATAACAGAAGAACGTTGCACAATGTATCTACGGGGTCTGGCCAACAGTCATTaGCTCGCCTCTTTAGTATGT +
Preference number: 2 (lower is better)
Translates to: SYHLKGITEERCTMYLRGLANSH*LASLVC
Trigger: ACATACTAAAGAGGCGAGGCAATGACTGTTGGCCAG...ACCCCGTAGATACATTGTGCAACGTTCTTCTGTTATTCCCTTGAGGTGGTAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CCA 90 bp ACGTACTTTCCGCATACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCATTATTGGTATCTTTTTaGCAGCAGTTTCACAGGAGT +
Preference number: 2 (lower is better)
Translates to: TYFPHTVARMTFLSHRKPLLVSF*QQFHRS
Trigger: ACTCCTGTGAAACTGCTGCCAAAAAGATACCAATAA...TGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGTATGCGGAAAGTACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR CAA 90 bp ATCCGCACTGCTGATGATTTTTCAAGATCGGTATTGTTAGTGTTATaGGTATCTTTTTGGCAGCAGTTTCACAGGAGTCCCTTTGTGGTG +
Preference number: 2 (lower is better)
Translates to: IRTADDFSRSVLLVL*VSFWQQFHRSPFVV
Trigger: CACCACAAAGGGACTCCTGTGAAACTGCTGCCAAAAAGATACCAATAACACTAACAATACCGATCTTGAAAAATCATCAGCAGTGCGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR TCA 90 bp CACTTATTAATCCAAACTACGGCATTGCATTTACAACAATCATCGCATAAACTGTGGGTTTTTCCCCGGTaGGAACTGGCCAACAGTCAT +
Preference number: 2 (lower is better)
Translates to: HLLIQTTALHLQQSSHKLWVFPR*ELANSH
Trigger: ATGACTGTTGGCCAGTTCTCACCGGGGAAAAACCCA...CAGTTTATGCGATGATTGTTGTAAATGCAATGCCGTAGTTTGGATTAATAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR GCA 90 bp TTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTAACACTAAGGAAATGTTCATaGCATCCTAACAGTGGGTTT +
Preference number: 2 (lower is better)
Translates to: FPQASPSYLRLHDLANLTLRKCS*HPNSGF
Trigger: AAACCCACTGTTAGGATGGCATGAACATTTCCTTAG...TGTTAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR GCA 90 bp GGAAAGGTCTTTATTGTCAGTTTAGAATGCAACATCTTAAGGTTACATGCTTTGGCAGCTACAGTCGCATaGAAAGGAGGATCCTGGTTG +
Preference number: 2 (lower is better)
Translates to: GKVFIVSLECNILRLHALAATVA*KGGSWL
Trigger: CAACCAGGATCCTCCTTTGCATGCGACTGTAGCTGC...CAAAGCATGTAACCTTAAGATGTTGCATTCTAAACTGACAATAAAGACCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277415.15
3UTR-3UTR CCA 90 bp TTCAAACTATTCATGAAATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTTCTTTCATGGTTACATaGGAGTGGACTGCTTCTTCA +
Preference number: 2 (lower is better)
Translates to: FKLFMKCSYSRMQRRILVSFMVT*EWTASS
Trigger: TGAAGAAGCAGTCCACTCCCATGTAACCATGAAAGA...AACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATTTCATGAATAGTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
3UTR CAA 90 bp CTCGATGTCAGAATCCGCACTGCTGATGATTTTTCAAGATCGGTATaGTTAGTGTTATTGGTATCTTTTTGGCAGCAGTTTCACAGGAGT +
Preference number: 2 (lower is better)
Translates to: LDVRIRTADDFSRSV*LVLLVSFWQQFHRS
Trigger: ACTCCTGTGAAACTGCTGCCAAAAAGATACCAATAACACTAACAATACCGATCTTGAAAAATCATCAGCAGTGCGGATTCTGACATCGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CCA 90 bp TTTGGGAAAGGTCTTTATTGTCAGTTTAGAATGCAACATCTTAAGGTTACATGCTCTGGCTCTCTTTCATaGTTACATGGGAGTGGACTG +
Preference number: 2 (lower is better)
Translates to: FGKGLYCQFRMQHLKVTCSGSLS*LHGSGL
Trigger: CAGTCCACTCCCATGTAACCATGAAAGAGAGCCAGA...GCATGTAACCTTAAGATGTTGCATTCTAAACTGACAATAAAGACCTTTCCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277415.15
3UTR-3UTR CCA 90 bp TTGGGAAAGGTCTTTATTGTCAGTTTAGAATGCAACATCTTAAGGTTACATGCTATGGTTACATGGGAGTaGACTGCTTCTTCAGTCACT +
Preference number: 2 (lower is better)
Translates to: LGKVFIVSLECNILRLHAMVTWE*TASSVT
Trigger: AGTGACTGAAGAAGCAGTCCACTCCCATGTAACCAT...AGCATGTAACCTTAAGATGTTGCATTCTAAACTGACAATAAAGACCTTTCCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277415.15
3UTR GCA 72 bp GAGGAAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTaGAAATACGGGAGTTTCTTCCGACGTCTGTGGCCC +
Preference number: 3 (lower is better)
Translates to: EENRGAVGCSSS*KYGSFFRRLWP
Trigger: GGGCCACAGACGTCGGAAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CAA 90 bp GCCATTAAGGCTTGGAGGGCCCTTGGGTGCGGCCATGTCCAGGACCACCCAGAACACAGGCATAGCCCTTaGTGGGGCAGCTTGCCACTA +
Preference number: 3 (lower is better)
Translates to: AIKAWRALGCGHVQDHPEHRHSP*WGSLPL
Trigger: TAGTGGCAAGCTGCCCCACAAAGGGCTATGCCTGTG...TTCTGGGTGGTCCTGGACATGGCCGCACCCAAGGGCCCTCCAAGCCTTAATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371799.8
3UTR-3UTR CAA 90 bp GCGCTTGGGGTAGCTCGTGTTCCAGGTCTGCAGGGTCTGCAGGGACACGGGGTCCGGTGGGAGGTGAAATaGTCCGTGTTCATGAAGTCA +
Preference number: 3 (lower is better)
Translates to: ALGVARVPGLQGLQGHGVRWEVK*SVFMKS
Trigger: TGACTTCATGAACACGGACAATTTCACCTCCCACCG...GACCCCGTGTCCCTGCAGACCCTGCAGACCTGGAACACGAGCTACCCCAAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545657.1
3UTR CCA 72 bp TCCAGCTGCAAATACGGGAGTTTCTTCCGACGTCTGTaGCCCGCCGGCTCGAAAGGGAGAAACACGGAGGTA +
Preference number: 3 (lower is better)
Translates to: SSCKYGSFFRRL*PAGSKGRNTEV
Trigger: TACCTCCGTGTTTCTCCCTTTCGAGCCGGCGGGCCACAGACGTCGGAAGAAACTCCCGTATTTGCAGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR GCA 72 bp GATACATTGTTCAGGGTACGACAAGCCCGTTTGAAATaGCCACGATCCCCACACCAGCACGCCACAGGGCTC +
Preference number: 3 (lower is better)
Translates to: DTLFRVRQARLK*PRSPHQHATGL
Trigger: GAGCCCTGTGGCGTGCTGGTGTGGGGATCGTGGGCATTTCAAACGGGCTTGTCGTACCCTGAACAATGTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371801.4
3UTR TCA 72 bp CTATTGATACATTGTTCAGGGTACGACAAGCCCGTTTaGAATGCCCACGATCCCCACACCAGCACGCCACAG +
Preference number: 3 (lower is better)
Translates to: LLIHCSGYDKPV*NAHDPHTSTPQ
Trigger: CTGTGGCGTGCTGGTGTGGGGATCGTGGGCATTTCAAACGGGCTTGTCGTACCCTGAACAATGTATCAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371801.4
3UTR GCA 72 bp GCCATGTCCAGGACCACCCAGAATCAGCCATCTCTTTaGCAAGGTGTCTCAATAAGACACAGGCATAGCCCT +
Preference number: 3 (lower is better)
Translates to: AMSRTTQNQPSL*QGVSIRHRHSP
Trigger: AGGGCTATGCCTGTGTCTTATTGAGACACCTTGGCAAAGAGATGGCTGATTCTGGGTGGTCCTGGACATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371799.8
3UTR GCA 72 bp AATCTAAGAGACAGCAACACAGTCAAGAAACGGCACTaGAATGGGATGCGAGTTACACTAGCCTACGGCCGG +
Preference number: 3 (lower is better)
Translates to: NLRDSNTVKKRH*NGMRVTLAYGR
Trigger: CCGGCCGTAGGCTAGTGTAACTCGCATCCCATTGCAGTGCCGTTTCTTGACTGTGTTGCTGTCTCTTAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CAA 90 bp CCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTGTATTGTTAGTGTTATaGGTATCTTTTTGGCAGCAG +
Preference number: 3 (lower is better)
Translates to: PVPSETRVSPGEPFLSAVVLLVL*VSFWQQ
Trigger: CTGCTGCCAAAAAGATACCAATAACACTAACAATAC...AACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTCTGGTTTCCGATGGGACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CAA 90 bp CTGGACGCCACATTCCTCGGAGCTGACCACGATCTAAGGAAATGTTCATGCCATTCTTTAGTATGTTGTTaGACCAGAGAGGGACAGGGC +
Preference number: 3 (lower is better)
Translates to: LDATFLGADHDLRKCSCHSLVCC*TREGQG
Trigger: GCCCTGTCCCTCTCTGGTCAAACAACATACTAAAGA...ATGGCATGAACATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGTGGCGTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR GCA 72 bp TTCCTCGGAGCTGACCACGATCTAAGGAAATGTTCATaGCATCCTAACAGTGGGTTTTTCCCCGGTGAGAAC +
Preference number: 3 (lower is better)
Translates to: FLGADHDLRKCS*HPNSGFFPGEN
Trigger: GTTCTCACCGGGGAAAAACCCACTGTTAGGATGGCATGAACATTTCCTTAGATCGTGGTCAGCTCCGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CAA 90 bp ACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGATCCAAACTACGGCATaGCATTTACAACAATCATCG +
Preference number: 3 (lower is better)
Translates to: TVARMTFLSHRKPEFPQAIQTTA*HLQQSS
Trigger: CGATGATTGTTGTAAATGCAATGCCGTAGTTTGGAT...CGCCTGGGGAAACTCTGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR CCA 72 bp CTTCAGTATGTACTAGACACAGGTCCAGGAGCTATGTaGAGCCTCAGCACGGTTAATCTAAGAGACAGCAAC +
Preference number: 3 (lower is better)
Translates to: LQYVLDTGPGAM*SLSTVNLRDSN
Trigger: GTTGCTGTCTCTTAGATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTCTAGTACATACTGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CAA 90 bp AATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCTCTTTAGTATGTTGTTaGACCAGAGAGGGACAGGGC +
Preference number: 3 (lower is better)
Translates to: NVSTGYASSNNVGTATSLSLVCC*TREGQG
Trigger: GCCCTGTCCCTCTCTGGTCAAACAACATACTAAAGA...GAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CAA 90 bp GAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTAACTGGCCAACAGTCATaGCCTCGCCTCTTTAGTATG +
Preference number: 3 (lower is better)
Translates to: EFPQASPSYLRLHDLANLTGQQS*PRLFSM
Trigger: CATACTAAAGAGGCGAGGCAATGACTGTTGGCCAGT...TAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CAA 90 bp AGTTACCACCTCAAGGGAATAACAGAAGAACGTTGCACAATGTATCTACGGGGTACTGGCCAACAGTCATaGCCTCGCCTCTTTAGTATG +
Preference number: 3 (lower is better)
Translates to: SYHLKGITEERCTMYLRGTGQQS*PRLFSM
Trigger: CATACTAAAGAGGCGAGGCAATGACTGTTGGCCAGT...ACCCCGTAGATACATTGTGCAACGTTCTTCTGTTATTCCCTTGAGGTGGTAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR CCA 72 bp ACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTaGGCACAGCAACTTCACTCTACACACTCTGACCAT +
Preference number: 3 (lower is better)
Translates to: TMYLRGTRVQTM*AQQLHSTHSDH
Trigger: ATGGTCAGAGTGTGTAGAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR CCA 72 bp AATGCATGGTGCAAAAAGCTCTCTGGCTCTCTTTCATaGTTACATGGGAGTGGACTGCTTCTTCAGTCACTG +
Preference number: 3 (lower is better)
Translates to: NAWCKKLSGSLS*LHGSGLLLQSL
Trigger: CAGTGACTGAAGAAGCAGTCCACTCCCATGTAACCATGAAAGAGAGCCAGAGAGCTTTTTGCACCATGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
3UTR-3UTR CAA 90 bp ACGTACTTTCCGCATACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAATCCAAACTACGGCATaGCATTTACAACAATCATCG +
Preference number: 3 (lower is better)
Translates to: TYFPHTVARMTFLSHRKPIQTTA*HLQQSS
Trigger: CGATGATTGTTGTAAATGCAATGCCGTAGTTTGGAT...TGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGTATGCGGAAAGTACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CAA 90 bp GACCACGATCTAAGGAAATGTTCATGCCATCCTAACAGTGGGTTTTTCCCCGGTGTATTGTTAGTGTTATaGGTATCTTTTTGGCAGCAG +
Preference number: 3 (lower is better)
Translates to: DHDLRKCSCHPNSGFFPGVLLVL*VSFWQQ
Trigger: CTGCTGCCAAAAAGATACCAATAACACTAACAATAC...ACCGGGGAAAAACCCACTGTTAGGATGGCATGAACATTTCCTTAGATCGTGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR-3UTR CAA 90 bp ACATTCCTCGGAGCTGACCACGATCTAAGGAAATGTTCATGCCATCCTAACAGTGTATTGTTAGTGTTATaGGTATCTTTTTGGCAGCAG +
Preference number: 3 (lower is better)
Translates to: TFLGADHDLRKCSCHPNSVLLVL*VSFWQQ
Trigger: CTGCTGCCAAAAAGATACCAATAACACTAACAATAC...ACTGTTAGGATGGCATGAACATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GCCCACGATCCCCACACCAGCACGCCACAGGGCTCCTCACTCACCTCCTGCCGGGGCCGGCACGCTGGCTaGCCTTCCAGGTCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: AHDPHTSTPQGSSLTSCRGRHAG*PSRSQR
Trigger: CCGCTGAGACCTGGAAGGGCAGCCAGCGTGCCGGCC...CCGGCAGGAGGTGAGTGAGGAGCCCTGTGGCGTGCTGGTGTGGGGATCGTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS-3UTR CCA 90 bp ATGCCCACGATCCCCACACCAGCACGCCACAGGGCTCCTCACTCACCTCCTGCCAGCTGGCCGGCACGCTaGCTGCCCTTCCAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: MPTIPTPARHRAPHSPPASWPAR*LPFQVS
Trigger: TGAGACCTGGAAGGGCAGCCAGCGTGCCGGCCAGCT...GGCAGGAGGTGAGTGAGGAGCCCTGTGGCGTGCTGGTGTGGGGATCGTGGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS-3UTR CCA 90 bp AGCTGCAAATACGGGAGTTTCTTCCGACGTCTGTGGCCCGCCGGCTCGAAAGGGGGGCGCCAGGGAAGGTaGCCAGGTGGCCTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SCKYGSFFRRLWPAGSKGGRQGR*PGGLCP
Trigger: CGGGCAGAGGCCACCTGGCCACCTTCCCTGGCGCCC...CCCTTTCGAGCCGGCGGGCCACAGACGTCGGAAGAAACTCCCGTATTTGCAGCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000371793.8
CDS-3UTR GCA 90 bp TGGCAGCAGTTTCACAGGAGTCCCTTTGTGGTGAGGACGTGGGCCCTTGGCTTCCCTGCCTTGCCCGGCTaGGTCCCTCCGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: WQQFHRSPFVVRTWALGFPALPG*VPPGSS
Trigger: GGAGGAGCCCGGAGGGACGCAGCCGGGCAAGGCAGG...GAAGCCAAGGGCCCACGTCCTCACCACAAAGGGACTCCTGTGAAACTGCTGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371793.8
CDS-3UTR GCA 90 bp AGCATCTTTTGGCCTGGGCATGGAGGCTTCAGGGTGCCATTAAGGCTTGGAGGGGCGCGCGGGCTCTGCTaGGCGAAGCCTCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SIFWPGHGGFRVPLRLGGARGLC*AKPPLC
Trigger: GCAGAGCGGAGGCTTCGCGCAGCAGAGCCCGCGCGC...CCCTCCAAGCCTTAATGGCACCCTGAAGCCTCCATGCCCAGGCCAAAAGATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR GCA 90 bp GGGGTAGCTCGTGTTCCAGGTCTGCAGGGTCTGCAGGGACACGGGGTCCAGCCTCTCGTGTTCCAGGTCTaGAGGGTCTGCAGGGACACG +
Preference number: 4 (lower is better)
Translates to: GVARVPGLQGLQGHGVQPLVFQV*RVCRDT
Trigger: CGTGTCCCTGCAGACCCTGCAGACCTGGAACACGAG...AGGCTGGACCCCGTGTCCCTGCAGACCCTGCAGACCTGGAACACGAGCTACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR CCA 90 bp CTGCAATGGGATGCGAGTTACACTAGCCTACGGCCGGGTGCAGCCCATGGCTCTAGCTCTCCTCAGGGTTaGTGGGCAGCACCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: LQWDASYTSLRPGAAHGSSSPQG*WAAPGG
Trigger: GCCGCCGGGTGCTGCCCACCAACCCTGAGGAGAGCT...AGAGCCATGGGCTGCACCCGGCCGTAGGCTAGTGTAACTCGCATCCCATTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371796.7
CDS-3UTR CCA 90 bp AAATGCCCACGATCCCCACACCAGCACGCCACAGGGCTCCTCACTCACCTCCTGAGCAATGCACACAGCTaGCCGGCACGCTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KCPRSPHQHATGLLTHLLSNAHS*PARWLP
Trigger: GGGCAGCCAGCGTGCCGGCCAGCTGTGTGCATTGCT...CAGGAGGTGAGTGAGGAGCCCTGTGGCGTGCTGGTGTGGGGATCGTGGGCATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS-3UTR TCA 90 bp CACAGGAGTCCCTTTGTGGTGAGGACGTGGGCCCTTGGCTTCCAGGAGGAGGGACAGTCACGGGGTCACTaGTGCCCGTCAACTTCCCGC +
Preference number: 4 (lower is better)
Translates to: HRSPFVVRTWALGFQEEGQSRGH*CPSTSR
Trigger: GCGGGAAGTTGACGGGCATCAGTGACCCCGTGACTG...TCCCTCCTCCTGGAAGCCAAGGGCCCACGTCCTCACCACAAAGGGACTCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp CGATCCCCACACCAGCACGCCACAGGGCTCCTCACTCACCTCCTGCCGGGCATGCAGCGGAGTCTTGAGTaGGTTCAGTGCCCATCAGGA +
Preference number: 4 (lower is better)
Translates to: RSPHQHATGLLTHLLPGMQRSLE*VQCPSG
Trigger: TCCTGATGGGCACTGAACTCACTCAAGACTCCGCTG...CATGCCCGGCAGGAGGTGAGTGAGGAGCCCTGTGGCGTGCTGGTGTGGGGATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS-3UTR GCA 90 bp ACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGGCGCGCGGGCTCTGCTaGGCGAAGCCTCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TVARMTFLSHRKPEFPQAARGLC*AKPPLC
Trigger: GCAGAGCGGAGGCTTCGCGCAGCAGAGCCCGCGCGC...CGCCTGGGGAAACTCTGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252854.8
CDS-3UTR GCA 90 bp CTGCAATGGGATGCGAGTTACACTAGCCTACGGCCGGGTGCAGCCCATGGCTCTCAGGTCTGCAGGGTCTaGAGGGACACGGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LQWDASYTSLRPGAAHGSQVCRV*RDTGSS
Trigger: GCTGGACCCCGTGTCCCTGCAGACCCTGCAGACCTG...AGAGCCATGGGCTGCACCCGGCCGTAGGCTAGTGTAACTCGCATCCCATTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp CACAGGAGTCCCTTTGTGGTGAGGACGTGGGCCCTTGGCTTCCAGGAGGAGGGAGCCGGGTGCAGCCCATaGCTCTCAAAGAGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: HRSPFVVRTWALGFQEEGAGCSP*LSKSLD
Trigger: GTCCAGGCTCTTTGAGAGCCATGGGCTGCACCCGGC...TCCCTCCTCCTGGAAGCCAAGGGCCCACGTCCTCACCACAAAGGGACTCCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp GGAGGGCCCTTGGGTGCGGCCATGTCCAGGACCACCCAGAATCAGCCATCTCTTGGTGCCATTAAGGCTTaGAGGGCCCTTGGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: GGPLGAAMSRTTQNQPSLGAIKA*RALGCG
Trigger: GCCGCACCCAAGGGCCCTCCAAGCCTTAATGGCACC...AAGAGATGGCTGATTCTGGGTGGTCCTGGACATGGCCGCACCCAAGGGCCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CCA 90 bp TTGAAATGCCCACGATCCCCACACCAGCACGCCACAGGGCTCCTCACTCACCTCCCCACCGCCTGTTTCTaGAGCCCCCAAGGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: LKCPRSPHQHATGLLTHLPTACF*SPQGQR
Trigger: ACGCTGCCCTTGGGGGCTCCAGAAACAGGCGGTGGG...GAGGTGAGTGAGGAGCCCTGTGGCGTGCTGGTGTGGGGATCGTGGGCATTTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS-3UTR TCA 90 bp GAAATGCCCACGATCCCCACACCAGCACGCCACAGGGCTCCTCACTCACCTCCTGGGGCAGCGGAGTCTTaGGTGAGTTCAGTGCCCATC +
Preference number: 4 (lower is better)
Translates to: EMPTIPTPARHRAPHSPPGAAES*VSSVPI
Trigger: GATGGGCACTGAACTCACTCAAGACTCCGCTGCCCC...AGGAGGTGAGTGAGGAGCCCTGTGGCGTGCTGGTGTGGGGATCGTGGGCATTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS-3UTR GCA 90 bp ACCAGCACGCCACAGGGCTCCTCACTCACCTCCTGCCGGGCATGTGGCCACAGCAAGACCCCCTCGTGCTaGCCTTTGAACTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TSTPQGSSLTSCRACGHSKTPSC*PLNFSA
Trigger: TGCTGAGAAGTTCAAAGGGCAGCACGAGGGGGTCTT...GCTGTGGCCACATGCCCGGCAGGAGGTGAGTGAGGAGCCCTGTGGCGTGCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS-3UTR GCA 90 bp GTACGACAAGCCCGTTTGAAATGCCCACGATCCCCACACCAGCACGCCACAGGGTCCTCACTCACCTCCTaGCGGGCATGTGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: VRQARLKCPRSPHQHATGSSLTS*RACGHS
Trigger: GCTGTGGCCACATGCCCGGCAGGAGGTGAGTGAGGA...CCCTGTGGCGTGCTGGTGTGGGGATCGTGGGCATTTCAAACGGGCTTGTCGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS-3UTR CCA 90 bp CCCTTGGGTGCGGCCATGTCCAGGACCACCCAGAATCAGCCATCTCTTTGCCAATCGTGTCCCCACGCCTaGATTCAGCACCCGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PLGAAMSRTTQNQPSLCQSCPHA*IQHPER
Trigger: CCGCTCCGGGTGCTGAATCCAGGCGTGGGGACACGA...TTGGCAAAGAGATGGCTGATTCTGGGTGGTCCTGGACATGGCCGCACCCAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CCA 90 bp TGCCTCGCCTCTTTAGTATGTTGTTTGACCAGAGAGGGACAGGGCGGGGAGGAAGTGCCCGACCAGGGGTaGGGGAGACGGTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: CLASLVCCLTREGQGGEEVPDQG*GRRWEV
Trigger: CACCTCCCACCGTCTCCCCCACCCCTGGTCGGGCAC...TTCCTCCCCGCCCTGTCCCTCTCTGGTCAAACAACATACTAAAGAGGCGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp TGGAGGGCCCTTGGGTGCGGCCATGTCCAGGACCACCCAGAATCAGCCATCTCTGACTGGCTGATCGTCTaGGCAGCACCAGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: WRALGCGHVQDHPESAISDWLIV*AAPGEG
Trigger: CCCTTCTCCTGGTGCTGCCCAGACGATCAGCCAGTC...AGAGATGGCTGATTCTGGGTGGTCCTGGACATGGCCGCACCCAAGGGCCCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CCA 90 bp CTTCAGGGTGCCATTAAGGCTTGGAGGGCCCTTGGGTGCGGCCATGTCCAGGACCTCTCCAGGAGGGACTaGCTGATCGTCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LQGAIKAWRALGCGHVQDLSRRD*LIVWAA
Trigger: TGCTGCCCAGACGATCAGCCAGTCCCTCCTGGAGAG...GTCCTGGACATGGCCGCACCCAAGGGCCCTCCAAGCCTTAATGGCACCCTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CCA 90 bp GGGTGCGGCCATGTCCAGGACCACCCAGAATCAGCCATCTCTTTGCCAAGGTGTGGCTTGGAGGGCCCTTaGGTGCGGCCATGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GCGHVQDHPESAISLPRCGLEGP*VRPCPG
Trigger: TCCTGGACATGGCCGCACCCAAGGGCCCTCCAAGCC...ACACCTTGGCAAAGAGATGGCTGATTCTGGGTGGTCCTGGACATGGCCGCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CCA 90 bp CGATCCCCACACCAGCACGCCACAGGGCTCCTCACTCACCTCCTGCCGGGCATGACCTCTGAAAATGCCTaGGGTCTTGGCTATCCGGCT +
Preference number: 4 (lower is better)
Translates to: RSPHQHATGLLTHLLPGMTSENA*GLGYPA
Trigger: AGCCGGATAGCCAAGACCCCAGGCATTTTCAGAGGT...CATGCCCGGCAGGAGGTGAGTGAGGAGCCCTGTGGCGTGCTGGTGTGGGGATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371801.4
3UTR CAA 72 bp GGAGGCTTCAGGGTGCCATTAAGGCTTGGAGGGCCCTaGGGTGCGGCCATGTCCAGGACCACCCAGAATCAG +
Preference number: 4 (lower is better)
Translates to: GGFRVPLRLGGP*GAAMSRTTQNQ
Trigger: CTGATTCTGGGTGGTCCTGGACATGGCCGCACCCAAGGGCCCTCCAAGCCTTAATGGCACCCTGAAGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR TCA 90 bp AGTTCCAGCTGCAAATACGGGAGTTTCTTCCGACGTCTGTGGCCCGCCGGCTCGACTCGTCGGAGCGGATaGCGTGGAAGAGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: SSSCKYGSFFRRLWPAGSTRRSG*RGRGSR
Trigger: ACGTGACCCTCTTCCACGTCATCCGCTCCGACGAGT...CGAGCCGGCGGGCCACAGACGTCGGAAGAAACTCCCGTATTTGCAGCTGGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp CTGCAATGGGATGCGAGTTACACTAGCCTACGGCCGGGTGCAGCCCATGGCTCTCTCGTGTTCCAGGTCTaGAGGGTCTGCAGGGACACG +
Preference number: 4 (lower is better)
Translates to: LQWDASYTSLRPGAAHGSLVFQV*RVCRDT
Trigger: CGTGTCCCTGCAGACCCTGCAGACCTGGAACACGAG...AGAGCCATGGGCTGCACCCGGCCGTAGGCTAGTGTAACTCGCATCCCATTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp AAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTCCGAGACGGCGCCGTCCTaGCTACTGGAGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: KTGAPWAAVPAANTGVSSETAPS*LLEPFS
Trigger: GGAAAAGGGCTCCAGTAGGCAGGACGGCGCCGTCTC...GGAAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371796.7
CDS-3UTR CCA 90 bp TGGCAGCAGTTTCACAGGAGTCCCTTTGTGGTGAGGACGTGGGCCCTTGGCTTCCTGCCCTCGCTGTCCTaGGCAGAGCTGTACACCTGC +
Preference number: 4 (lower is better)
Translates to: WQQFHRSPFVVRTWALGFLPSLS*AELYTC
Trigger: GCAGGTGTACAGCTCTGCCCAGGACAGCGAGGGCAG...GAAGCCAAGGGCCCACGTCCTCACCACAAAGGGACTCCTGTGAAACTGCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp GACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTAATCTAAGAGACAGCGTGCCCGACCAGGGGTaGGGGAGACGGTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: DTGPGAMWSLSTVNLRDSVPDQG*GRRWEV
Trigger: CACCTCCCACCGTCTCCCCCACCCCTGGTCGGGCAC...GCTGTCTCTTAGATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp GTCCAGGCTGCGGGTCTTGAGGATGGTCTCTGTCTTCAGGTCAAACCTGATGATGTGCCCGACCAGGGGTaGGGGAGACGGTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VQAAGLEDGLCLQVKPDDVPDQG*GRRWEV
Trigger: CACCTCCCACCGTCTCCCCCACCCCTGGTCGGGCAC...ATCATCAGGTTTGACCTGAAGACAGAGACCATCCTCAAGACCCGCAGCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR CCA 90 bp GGAAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTTTCTTCCGACGTCTGTaGCCCGCCGGCTCGAAAGGG +
Preference number: 4 (lower is better)
Translates to: GKPGRRGLQFQLQIREFLFFRRL*PAGSKG
Trigger: CCCTTTCGAGCCGGCGGGCCACAGACGTCGGAAGAA...AAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp GGGCATGGAGGCTTCAGGGTGCCATTAAGGCTTGGAGGGCCCTTGGGTGCGGCCTGCTGGATTGGGATTTaGACTGCACATCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GHGGFRVPLRLGGPLGAACWIGI*TAHPGQ
Trigger: CTGCCCAGGATGTGCAGTCCAAATCCCAATCCAGCA...GGCCGCACCCAAGGGCCCTCCAAGCCTTAATGGCACCCTGAAGCCTCCATGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR TCA 90 bp AGCTGCAAATACGGGAGTTTCTTCCGACGTCTGTGGCCCGCCGGCTCGAAAGGGGACCTTGGTACCCCCTaGGTAGCCGTTGGTGACGTA +
Preference number: 4 (lower is better)
Translates to: SCKYGSFFRRLWPAGSKGDLGTP*VAVGDV
Trigger: TACGTCACCAACGGCTACTCAGGGGGTACCAAGGTC...CCCTTTCGAGCCGGCGGGCCACAGACGTCGGAAGAAACTCCCGTATTTGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp TGGCAGCAGTTTCACAGGAGTCCCTTTGTGGTGAGGACGTGGGCCCTTGGCTTCGTGGAGCGACCACTGTaGAGATACACCTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: WQQFHRSPFVVRTWALGFVERPL*RYTCPR
Trigger: GCGAGGGCAGGTGTATCTGCACAGTGGTCGCTCCAC...GAAGCCAAGGGCCCACGTCCTCACCACAAAGGGACTCCTGTGAAACTGCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp CCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTCTCGTGTTCCAGGTCTaGAGGGTCTGCAGGGACACG +
Preference number: 4 (lower is better)
Translates to: PVPSETRVSPGEPFLSAVLVFQV*RVCRDT
Trigger: CGTGTCCCTGCAGACCCTGCAGACCTGGAACACGAG...AACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTCTGGTTTCCGATGGGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp ACGTACTTTCCGCATACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCATGGGCAGCACGCCGGTaGTGCGGTCCAGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: TYFPHTVARMTFLSHRKPWAARR*CGPASR
Trigger: GCGGGACGCTGGACCGCAGCACCGGCGTGCTGCCCA...TGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGTATGCGGAAAGTACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371793.8
CDS-3UTR CCA 90 bp TGGCAGCAGTTTCACAGGAGTCCCTTTGTGGTGAGGACGTGGGCCCTTGGCTTCACAGGGCCCGGTCCTTaGGGTTGTAGTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: WQQFHRSPFVVRTWALGFTGPGP*GCSPAW
Trigger: CCATGCTGGACTACAACCCCAAGGACCGGGCCCTGT...GAAGCCAAGGGCCCACGTCCTCACCACAAAGGGACTCCTGTGAAACTGCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp AGTTCCAGCTGCAAATACGGGAGTTTCTTCCGACGTCTGTGGCCCGCCGGCTCGTTTGTGGTGAGGACGTaGGCCCTTGGCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SSSCKYGSFFRRLWPAGSFVVRT*ALGFQE
Trigger: CTCCTGGAAGCCAAGGGCCCACGTCCTCACCACAAA...CGAGCCGGCGGGCCACAGACGTCGGAAGAAACTCCCGTATTTGCAGCTGGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp CTGCAATGGGATGCGAGTTACACTAGCCTACGGCCGGGTGCAGCCCATGGCTCTTTTGTGGTGAGGACGTaGGCCCTTGGCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LQWDASYTSLRPGAAHGSFVVRT*ALGFQE
Trigger: CTCCTGGAAGCCAAGGGCCCACGTCCTCACCACAAA...AGAGCCATGGGCTGCACCCGGCCGTAGGCTAGTGTAACTCGCATCCCATTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp AGCTGCAAATACGGGAGTTTCTTCCGACGTCTGTGGCCCGCCGGCTCGAAAGGGGGCTCTCAAAGAGCCTaGACGCCACATTCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: SCKYGSFFRRLWPAGSKGGSQRA*TPHSSE
Trigger: CTCCGAGGAATGTGGCGTCCAGGCTCTTTGAGAGCC...CCCTTTCGAGCCGGCGGGCCACAGACGTCGGAAGAAACTCCCGTATTTGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp AGTTCCAGCTGCAAATACGGGAGTTTCTTCCGACGTCTGTGGCCCGCCGGCTCGGGCTCTCAAAGAGCCTaGACGCCACATTCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: SSSCKYGSFFRRLWPAGSGSQRA*TPHSSE
Trigger: CTCCGAGGAATGTGGCGTCCAGGCTCTTTGAGAGCC...CGAGCCGGCGGGCCACAGACGTCGGAAGAAACTCCCGTATTTGCAGCTGGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp ACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGCAGTCACGGGGTCACTaGTGCCCGTCAACTTCCCGC +
Preference number: 4 (lower is better)
Translates to: TVARMTFLSHRKPEFPQAQSRGH*CPSTSR
Trigger: GCGGGAAGTTGACGGGCATCAGTGACCCCGTGACTG...CGCCTGGGGAAACTCTGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp CCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTGACCTTGGTACCCCCTaGGTAGCCGTTGGTGACGTA +
Preference number: 4 (lower is better)
Translates to: PVPSETRVSPGEPFLSAVDLGTP*VAVGDV
Trigger: TACGTCACCAACGGCTACTCAGGGGGTACCAAGGTC...AACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTCTGGTTTCCGATGGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp TTTGAAATGCCCACGATCCCCACACCAGCACGCCACAGGGCTCCTCACTCACCTCCTCGTGCTGCCCTTTaGACTTCTCAGCAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: FEMPTIPTPARHRAPHSPPRAAL*TSQQGV
Trigger: GACTCCCTGCTGAGAAGTTCAAAGGGCAGCACGAGG...AGGTGAGTGAGGAGCCCTGTGGCGTGCTGGTGTGGGGATCGTGGGCATTTCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS-3UTR GCA 90 bp AGCTGCAAATACGGGAGTTTCTTCCGACGTCTGTGGCCCGCCGGCTCGAAAGGGCGTGAACACATGGTCTaGTGTGGAGCGACCACTGTG +
Preference number: 4 (lower is better)
Translates to: SCKYGSFFRRLWPAGSKGREHMV*CGATTV
Trigger: CACAGTGGTCGCTCCACAGCAGACCATGTGTTCACG...CCCTTTCGAGCCGGCGGGCCACAGACGTCGGAAGAAACTCCCGTATTTGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp CATGTTGTTGTAACCGGCATAGTCCAGGCTGCGGGTCTTGAGGATGGTCTCTGTCAGGTCTGCAGGGTCTaGAGGGACACGGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: HVVVTGIVQAAGLEDGLCQVCRV*RDTGSS
Trigger: GCTGGACCCCGTGTCCCTGCAGACCCTGCAGACCTG...ACAGAGACCATCCTCAAGACCCGCAGCCTGGACTATGCCGGTTACAACAACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR GCA 90 bp TGCCTCGCCTCTTTAGTATGTTGTTTGACCAGAGAGGGACAGGGCGGGGAGGAACTTTGGGGCAAAGGTTaGCGGCAGAGAGACGGCGCC +
Preference number: 4 (lower is better)
Translates to: CLASLVCCLTREGQGGEELWGKG*RQRDGA
Trigger: GGCGCCGTCTCTCTGCCGGCAACCTTTGCCCCAAAG...TTCCTCCCCGCCCTGTCCCTCTCTGGTCAAACAACATACTAAAGAGGCGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371796.7
CDS-3UTR GCA 90 bp GCCATTAAGGCTTGGAGGGCCCTTGGGTGCGGCCATGTCCAGGACCACCCAGAAGATTGGGATTTGGACTaGACATCCTGGGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: AIKAWRALGCGHVQDHPEDWDLD*TSWAEP
Trigger: TGGCTCTGCCCAGGATGTGCAGTCCAAATCCCAATC...TTCTGGGTGGTCCTGGACATGGCCGCACCCAAGGGCCCTCCAAGCCTTAATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR GCA 90 bp CATGGAGGCTTCAGGGTGCCATTAAGGCTTGGAGGGCCCTTGGGTGCGGCCATGTGGTTGGCTCTTCTCTaGAGGTATCTGCTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: HGGFRVPLRLGGPLGAAMWLALL*RYLLPC
Trigger: ACAGGGGAGCAGATACCTGCAGAGAAGAGCCAACCA...CATGGCCGCACCCAAGGGCCCTCCAAGCCTTAATGGCACCCTGAAGCCTCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CCA 90 bp GGAAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTGGCTCTCAAAGAGCCTaGACGCCACATTCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: GKPGRRGLQFQLQIREFLGSQRA*TPHSSE
Trigger: CTCCGAGGAATGTGGCGTCCAGGCTCTTTGAGAGCC...AAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp TGCGGCCATGTCCAGGACCACCCAGAATCAGCCATCTCTTTGCCAAGGTGTCTCGCCAGGGAGCCAGCGTaGGCTTCCAGGCAAAACAAG +
Preference number: 4 (lower is better)
Translates to: CGHVQDHPESAISLPRCLAREPA*ASRQNK
Trigger: CTTGTTTTGCCTGGAAGCCCACGCTGGCTCCCTGGC...GAGACACCTTGGCAAAGAGATGGCTGATTCTGGGTGGTCCTGGACATGGCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CCA 90 bp CATGGAGGCTTCAGGGTGCCATTAAGGCTTGGAGGGCCCTTGGGTGCGGCCATGACCCCACTGCTGGATTaGGATTTGGACTGCACATCC +
Preference number: 4 (lower is better)
Translates to: HGGFRVPLRLGGPLGAAMTPLLD*DLDCTS
Trigger: GGATGTGCAGTCCAAATCCCAATCCAGCAGTGGGGT...CATGGCCGCACCCAAGGGCCCTCCAAGCCTTAATGGCACCCTGAAGCCTCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CCA 90 bp CTTCAGGGTGCCATTAAGGCTTGGAGGGCCCTTGGGTGCGGCCATGTCCAGGACAGGCATAGCCCTTTGTaGGGCAGCTTGCCACTAATC +
Preference number: 4 (lower is better)
Translates to: LQGAIKAWRALGCGHVQDRHSPL*GSLPLI
Trigger: GATTAGTGGCAAGCTGCCCCACAAAGGGCTATGCCT...GTCCTGGACATGGCCGCACCCAAGGGCCCTCCAAGCCTTAATGGCACCCTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CCA 90 bp GCAAAAAGCTCTCTGGCTCTCTTTCATGGTTACATGGGAGTGGACTGCTTCTTCGGGCGCCAGGGAAGGTaGCCAGGTGGCCTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: AKSSLALFHGYMGVDCFFGRQGR*PGGLCP
Trigger: CGGGCAGAGGCCACCTGGCCACCTTCCCTGGCGCCC...GAAGAAGCAGTCCACTCCCATGTAACCATGAAAGAGAGCCAGAGAGCTTTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392991.8
CDS-3UTR TCA 90 bp GACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTAATCTAAGAGACAGCGGAGTCCCTTTGTGGTaGGGACGTGGGCCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: DTGPGAMWSLSTVNLRDSGVPLW*GRGPLA
Trigger: AGCCAAGGGCCCACGTCCTCACCACAAAGGGACTCC...GCTGTCTCTTAGATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp CATGAAATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTGTATTCAAGGTGCGCGCGGGCTCTGCTaGGCGAAGCCTCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: HEMQLQSHAKEDPGCIQGARGLC*AKPPLC
Trigger: GCAGAGCGGAGGCTTCGCGCAGCAGAGCCCGCGCGC...ACCTTGAATACAACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATTTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277415.15
CDS-3UTR GCA 90 bp CTGCAATGGGATGCGAGTTACACTAGCCTACGGCCGGGTGCAGCCCATGGCTCTACCTTCTCCAGTAGCTaGCTCAGCTGTTTTGTGCGG +
Preference number: 4 (lower is better)
Translates to: LQWDASYTSLRPGAAHGSTFSSS*LSCFVR
Trigger: CCGCACAAAACAGCTGAGGCAGCTACTGGAGAAGGT...AGAGCCATGGGCTGCACCCGGCCGTAGGCTAGTGTAACTCGCATCCCATTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp TTGGGTGCGGCCATGTCCAGGACCACCCAGAATCAGCCATCTCTTTGCCAAGGTGCGAAGCCTCCGCTCTaGATATTTATCGCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LGAAMSRTTQNQPSLCQGAKPPL*IFIASR
Trigger: CCGGGACGCGATAAATATGCAGAGCGGAGGCTTCGC...ACCTTGGCAAAGAGATGGCTGATTCTGGGTGGTCCTGGACATGGCCGCACCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR GCA 90 bp CAGGGTACGACAAGCCCGTTTGAAATGCCCACGATCCCCACACCAGCACGCCACATATTAAGCCAGCAATaGACACAGCTGGCCGGCACG +
Preference number: 4 (lower is better)
Translates to: QGTTSPFEMPTIPTPARHILSQQ*TQLAGT
Trigger: CGTGCCGGCCAGCTGTGTGCATTGCTGGCTTAATAT...GTGGCGTGCTGGTGTGGGGATCGTGGGCATTTCAAACGGGCTTGTCGTACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS-3UTR GCA 90 bp AGGGTACGACAAGCCCGTTTGAAATGCCCACGATCCCCACACCAGCACGCCACACAAGCCCGTTTGAAATaGCCACGATCCCCACACCAG +
Preference number: 4 (lower is better)
Translates to: RVRQARLKCPRSPHQHATQARLK*PRSPHQ
Trigger: CTGGTGTGGGGATCGTGGGCATTTCAAACGGGCTTG...TGTGGCGTGCTGGTGTGGGGATCGTGGGCATTTCAAACGGGCTTGTCGTACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS-3UTR GCA 90 bp AAGCTCTCTGGCTCTCTTTCATGGTTACATGGGAGTGGACTGCTTCTTCAGTCACATCGCGCCTCGAGCTaGCTCCAGCGCCCGCTCCGA +
Preference number: 4 (lower is better)
Translates to: KLSGSLSWLHGSGLLLQSHRASS*LQRPLR
Trigger: TCGGAGCGGGCGCTGGAGGCAGCTCGAGGCGCGATG...TGACTGAAGAAGCAGTCCACTCCCATGTAACCATGAAAGAGAGCCAGAGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392991.8
CDS-3UTR CCA 90 bp AAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTCCCATCCCGTGAACACATaGTCTGCTGTGGAGCGACCA +
Preference number: 4 (lower is better)
Translates to: KTGAPWAAVPAANTGVSSHPVNT*SAVERP
Trigger: TGGTCGCTCCACAGCAGACCATGTGTTCACGGGATG...GGAAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp TGCCTCGCCTCTTTAGTATGTTGTTTGACCAGAGAGGGACAGGGCGGGGAGGAAGGGTGGGGGAGACGGTaGGAGGTGAAATTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: CLASLVCCLTREGQGGEEGWGRR*EVKLSV
Trigger: CACGGACAATTTCACCTCCCACCGTCTCCCCCACCC...TTCCTCCCCGCCCTGTCCCTCTCTGGTCAAACAACATACTAAAGAGGCGAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp TGCCTCGCCTCTTTAGTATGTTGTTTGACCAGAGAGGGACAGGGCGGGGAGGAAACAGGGCCCGGTCCTTaGGGTTGTAGTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: CLASLVCCLTREGQGGEETGPGP*GCSPAW
Trigger: CCATGCTGGACTACAACCCCAAGGACCGGGCCCTGT...TTCCTCCCCGCCCTGTCCCTCTCTGGTCAAACAACATACTAAAGAGGCGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp CACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCATCTCCTCAGGGTTGGTaGGCAGCACCCGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: HNVSTGYASSNNVGTATSSPQGW*AAPGGG
Trigger: GCCGCCGCCGGGTGCTGCCCACCAACCCTGAGGAGA...TGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371796.7
CDS-3UTR CCA 90 bp TGGGTGCGGCCATGTCCAGGACCACCCAGAATCAGCCATCTCTTTGCCAAGGTGCTTTTGGCCTGGGCATaGAGGCTTCAGGGTGCCATT +
Preference number: 4 (lower is better)
Translates to: WVRPCPGPPRISHLFAKVLLAWA*RLQGAI
Trigger: AATGGCACCCTGAAGCCTCCATGCCCAGGCCAAAAG...CACCTTGGCAAAGAGATGGCTGATTCTGGGTGGTCCTGGACATGGCCGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR TCA 90 bp AGCTGCAAATACGGGAGTTTCTTCCGACGTCTGTGGCCCGCCGGCTCGAAAGGGTCTCCTCCACCTGTTTaGACTTGGACTCCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: SCKYGSFFRRLWPAGSKGSPPPV*TWTPVL
Trigger: AAGGACTGGAGTCCAAGTTCAAACAGGTGGAGGAGA...CCCTTTCGAGCCGGCGGGCCACAGACGTCGGAAGAAACTCCCGTATTTGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp GGAAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTTGGGTTTTTCCCCGGTaGGAACTGGCCAACAGTCAT +
Preference number: 4 (lower is better)
Translates to: GKPGRRGLQFQLQIREFLWVFPR*ELANSH
Trigger: ATGACTGTTGGCCAGTTCTCACCGGGGAAAAACCCA...AAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp AGTTCCAGCTGCAAATACGGGAGTTTCTTCCGACGTCTGTGGCCCGCCGGCTCGATACTGTTGCCCGTATaGCTTTCCTGTCCCATCGGA +
Preference number: 4 (lower is better)
Translates to: SSSCKYGSFFRRLWPAGSILLPV*LSCPIG
Trigger: TCCGATGGGACAGGAAAGTCATACGGGCAACAGTAT...CGAGCCGGCGGGCCACAGACGTCGGAAGAAACTCCCGTATTTGCAGCTGGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp CTGCAATGGGATGCGAGTTACACTAGCCTACGGCCGGGTGCAGCCCATGGCTCTCCGCAAGCTAGTTTTTaGATGCATGCACGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: LQWDASYTSLRPGAAHGSPQASF*MHARSL
Trigger: AAGGCTCCGTGCATGCATGCAAAAACTAGCTTGCGG...AGAGCCATGGGCTGCACCCGGCCGTAGGCTAGTGTAACTCGCATCCCATTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp AGCTGCAAATACGGGAGTTTCTTCCGACGTCTGTGGCCCGCCGGCTCGAAAGGGGGCATTGGTCTGGTATaGATAGTGGACCTTGGTACC +
Preference number: 4 (lower is better)
Translates to: SCKYGSFFRRLWPAGSKGGIGLV*IVDLGT
Trigger: GGTACCAAGGTCCACTATGCATACCAGACCAATGCC...CCCTTTCGAGCCGGCGGGCCACAGACGTCGGAAGAAACTCCCGTATTTGCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp AGCTGCAAATACGGGAGTTTCTTCCGACGTCTGTGGCCCGCCGGCTCGAAAGGGGGCTGCAGTTCCAGCTaGAAATACGGGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SCKYGSFFRRLWPAGSKGGCSSS*KYGSFF
Trigger: GAAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCC...CCCTTTCGAGCCGGCGGGCCACAGACGTCGGAAGAAACTCCCGTATTTGCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp CACAGGAGTCCCTTTGTGGTGAGGACGTGGGCCCTTGGCTTCCAGGAGGAGGGACTTTCCGCATACTGTTaGCCGTATGACTTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: HRSPFVVRTWALGFQEEGLSAYC*PYDFPV
Trigger: GACAGGAAAGTCATACGGGCAACAGTATGCGGAAAG...TCCCTCCTCCTGGAAGCCAAGGGCCCACGTCCTCACCACAAAGGGACTCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp AAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTCCACACATGGTCTGCTGTaGAGCGACCACTGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: KTGAPWAAVPAANTGVSSTHGLL*SDHCAD
Trigger: ATCTGCACAGTGGTCGCTCCACAGCAGACCATGTGT...GGAAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp ATGCCATCCCTCGATGTCAGAATCCGCACTGCTGATGATTTTTCAAGATCGGTAGTGCCCGACCAGGGGTaGGGGAGACGGTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: MPSLDVRIRTADDFSRSVVPDQG*GRRWEV
Trigger: CACCTCCCACCGTCTCCCCCACCCCTGGTCGGGCAC...TACCGATCTTGAAAAATCATCAGCAGTGCGGATTCTGACATCGAGGGATGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp ACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGATGTTGCCAGCGTTCTaGTTGGTGGCGTACACGGCC +
Preference number: 4 (lower is better)
Translates to: TVARMTFLSHRKPEFPQAMLPAF*LVAYTA
Trigger: GGCCGTGTACGCCACCAACCAGAACGCTGGCAACAT...CGCCTGGGGAAACTCTGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp GGAAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTATGCATAGTGGACCTTaGTACCCCCTGAGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: GKPGRRGLQFQLQIREFLMHSGP*YPLSSR
Trigger: ACGGCTACTCAGGGGGTACCAAGGTCCACTATGCAT...AAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp AAGAGCCTGGACGCCACATTCCTCGGAGCTGACCACGATCTAAGGAAATGTTCAGCCGGGTGCAGCCCATaGCTCTCAAAGAGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: KSLDATFLGADHDLRKCSAGCSP*LSKSLD
Trigger: GTCCAGGCTCTTTGAGAGCCATGGGCTGCACCCGGC...TGAACATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGTGGCGTCCAGGCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp CTGGACGCCACATTCCTCGGAGCTGACCACGATCTAAGGAAATGTTCATGCCATGCAGAGGGTCCGCTTTaGGGCAAAGGTTGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: LDATFLGADHDLRKCSCHAEGPL*GKGCRQ
Trigger: CTGCCGGCAACCTTTGCCCCAAAGCGGACCCTCTGC...ATGGCATGAACATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGTGGCGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371796.7
CDS-3UTR CCA 90 bp GAAAAGCATCTTTTGGCCTGGGCATGGAGGCTTCAGGGTGCCATTAAGGCTTGGTTGGACTGCACATCCTaGGCAGAGCCAGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: EKHLLAWAWRLQGAIKAWLDCTS*AEPGSQ
Trigger: CTGGCTCCCTGGCTCTGCCCAGGATGTGCAGTCCAA...CCAAGCCTTAATGGCACCCTGAAGCCTCCATGCCCAGGCCAAAAGATGCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CCA 90 bp CCCTTGGGTGCGGCCATGTCCAGGACCACCCAGAATCAGCCATCTCTTTGCCAAAAGCATCTTTTGGCCTaGGCATGGAGGCTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: PLGAAMSRTTQNQPSLCQKHLLA*AWRLQG
Trigger: ACCCTGAAGCCTCCATGCCCAGGCCAAAAGATGCTT...TTGGCAAAGAGATGGCTGATTCTGGGTGGTCCTGGACATGGCCGCACCCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR TCA 90 bp CCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTTCTCCTCCACCTGTTTaGACTTGGACTCCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: PVPSETRVSPGEPFLSAVSPPPV*TWTPVL
Trigger: AAGGACTGGAGTCCAAGTTCAAACAGGTGGAGGAGA...AACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTCTGGTTTCCGATGGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp GCACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCCAGTCACGGGGTCACTaGTGCCCGTCAACTTCCCGC +
Preference number: 4 (lower is better)
Translates to: AQCIYGVREFKQCGHSNFQSRGH*CPSTSR
Trigger: GCGGGAAGTTGACGGGCATCAGTGACCCCGTGACTG...GAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp CTCGTGTTCCAGGTCTGCAGGGTCTGCAGGGACACGGGGTCCAGCCTACTGACCAATTGTCCGTGTTCATaGAGTCAACCATGGACTTGT +
Preference number: 4 (lower is better)
Translates to: LVFQVCRVCRDTGSSLLTNCPCS*SQPWTC
Trigger: ACAAGTCCATGGTTGACTTCATGAACACGGACAATT...GGTCAGTAGGCTGGACCCCGTGTCCCTGCAGACCCTGCAGACCTGGAACACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR TCA 90 bp CCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTCACATTCCTCGGAGCTaGCCACGATCTAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: PVPSETRVSPGEPFLSAVHIPRS*PRSKEM
Trigger: CATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGTG...AACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTCTGGTTTCCGATGGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp TGCCTCGCCTCTTTAGTATGTTGTTTGACCAGAGAGGGACAGGGCGGGGAGGAAGCCTCAGCTGTTTTGTaGGGGCATCCCGTGAACACA +
Preference number: 4 (lower is better)
Translates to: CLASLVCCLTREGQGGEEASAVL*GHPVNT
Trigger: TGTGTTCACGGGATGCCCGCACAAAACAGCTGAGGC...TTCCTCCCCGCCCTGTCCCTCTCTGGTCAAACAACATACTAAAGAGGCGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp AAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTCCGCGCCAATTTCCTCTTaGAGCTCGTTAAGCACTGAC +
Preference number: 4 (lower is better)
Translates to: KTGAPWAAVPAANTGVSSAPISS*SSLSTD
Trigger: GTCAGTGCTTAACGAGCTGCAAGAGGAAATTGGCGC...GGAAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp AAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTCCGGCATTGGTCTGGTATaGATAGTGGACCTTGGTACC +
Preference number: 4 (lower is better)
Translates to: KTGAPWAAVPAANTGVSSGIGLV*IVDLGT
Trigger: GGTACCAAGGTCCACTATGCATACCAGACCAATGCC...GGAAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp AGTTCCAGCTGCAAATACGGGAGTTTCTTCCGACGTCTGTGGCCCGCCGGCTCGCTGGCCAACAGTCATTaGCTCGCCTCTTTAGTATGT +
Preference number: 4 (lower is better)
Translates to: SSSCKYGSFFRRLWPAGSLANSH*LASLVC
Trigger: ACATACTAAAGAGGCGAGGCAATGACTGTTGGCCAG...CGAGCCGGCGGGCCACAGACGTCGGAAGAAACTCCCGTATTTGCAGCTGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GCCATTAAGGCTTGGAGGGCCCTTGGGTGCGGCCATGTCCAGGACCACCCAGAAGTGCACATGAATGAATaGATCTGTCCAGCAACAGTG +
Preference number: 4 (lower is better)
Translates to: AIKAWRALGCGHVQDHPEVHMNE*ICPATV
Trigger: CACTGTTGCTGGACAGATGCATTCATTCATGTGCAC...TTCTGGGTGGTCCTGGACATGGCCGCACCCAAGGGCCCTCCAAGCCTTAATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR GCA 90 bp TTCAAACTATTCATGAAATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTTGGGCAGCACGCCGGTaGTGCGGTCCAGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: FKLFMKCSYSRMQRRILVWAARR*CGPASR
Trigger: GCGGGACGCTGGACCGCAGCACCGGCGTGCTGCCCA...AACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATTTCATGAATAGTTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392991.8
CDS-3UTR CCA 90 bp AATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCTCGTGTCCCCACGCCTaGATTCAGCACCCGGAGCGG +
Preference number: 4 (lower is better)
Translates to: NVSTGYASSNNVGTATSLSCPHA*IQHPER
Trigger: CCGCTCCGGGTGCTGAATCCAGGCGTGGGGACACGA...GAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252854.8
CDS-3UTR CCA 90 bp GCACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCCTGCCCTCGCTGTCCTaGGCAGAGCTGTACACCTGC +
Preference number: 4 (lower is better)
Translates to: AQCIYGVREFKQCGHSNFLPSLS*AELYTC
Trigger: GCAGGTGTACAGCTCTGCCCAGGACAGCGAGGGCAG...GAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp TGGCAGCAGTTTCACAGGAGTCCCTTTGTGGTGAGGACGTGGGCCCTTGGCTTCGAAACGGCACTGCAATaGGATGCGAGTTACACTAGC +
Preference number: 4 (lower is better)
Translates to: WQQFHRSPFVVRTWALGFETALQ*DASYTS
Trigger: GCTAGTGTAACTCGCATCCCATTGCAGTGCCGTTTC...GAAGCCAAGGGCCCACGTCCTCACCACAAAGGGACTCCTGTGAAACTGCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp CCCTTGGGTGCGGCCATGTCCAGGACCACCCAGAATCAGCCATCTCTTTGCCAAAGGAAAAGCATCTTTTaGCCTGGGCATGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: PLGAAMSRTTQNQPSLCQRKSIF*PGHGGF
Trigger: GAAGCCTCCATGCCCAGGCCAAAAGATGCTTTTCCT...TTGGCAAAGAGATGGCTGATTCTGGGTGGTCCTGGACATGGCCGCACCCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CCA 90 bp TGCATGGTGCAAAAAGCTCTCTGGCTCTCTTTCATGGTTACATGGGAGTGGACTTCTCCTCAGGGTTGGTaGGCAGCACGCCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: CMVQKALWLSFMVTWEWTSPQGW*AARRCC
Trigger: GCAGCACCGGCGTGCTGCCCACCAACCCTGAGGAGA...AGTCCACTCCCATGTAACCATGAAAGAGAGCCAGAGAGCTTTTTGCACCATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392991.8
CDS-3UTR TCA 90 bp ACGTACTTTCCGCATACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCATGTGCGGGCATCCCGTaGACACATGGTCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TYFPHTVARMTFLSHRKPCAGIP*THGLLW
Trigger: CCACAGCAGACCATGTGTTCACGGGATGCCCGCACA...TGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGTATGCGGAAAGTACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp CACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCAGGAGTCCCTTTGTGGTaGGGACGTGGGCCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: HNVSTGYASSNNVGTATSGVPLW*GRGPLA
Trigger: AGCCAAGGGCCCACGTCCTCACCACAAAGGGACTCC...TGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp AGAAACACGGAGGTAATGCCATCCCTCGATGTCAGAATCCGCACTGCTGATGATGTGGAGCGACCACTGTaGAGATACACCTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: RNTEVMPSLDVRIRTADDVERPL*RYTCPR
Trigger: GCGAGGGCAGGTGTATCTGCACAGTGGTCGCTCCAC...ATCATCAGCAGTGCGGATTCTGACATCGAGGGATGGCATTACCTCCGTGTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTACAGGTCTGCAGGGTCTaGAGGGACACGGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: EFPQASPSYLRLHDLANLQVCRV*RDTGSS
Trigger: GCTGGACCCCGTGTCCCTGCAGACCCTGCAGACCTG...TAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp ACATTCCTCGGAGCTGACCACGATCTAAGGAAATGTTCATGCCATCCTAACAGTCAGGTCTGCAGGGTCTaGAGGGACACGGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: TFLGADHDLRKCSCHPNSQVCRV*RDTGSS
Trigger: GCTGGACCCCGTGTCCCTGCAGACCCTGCAGACCTG...ACTGTTAGGATGGCATGAACATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GACCACGATCTAAGGAAATGTTCATGCCATCCTAACAGTGGGTTTTTCCCCGGTCGGGGCGCCGTGGGCTaGAGTTCCAGCTGCAAATAC +
Preference number: 4 (lower is better)
Translates to: DHDLRKCSCHPNSGFFPGRGAVG*SSSCKY
Trigger: GTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCG...ACCGGGGAAAAACCCACTGTTAGGATGGCATGAACATTTCCTTAGATCGTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp TGGCAGCAGTTTCACAGGAGTCCCTTTGTGGTGAGGACGTGGGCCCTTGGCTTCGTCAAGAAACGGCACTaGAATGGGATGCGAGTTACA +
Preference number: 4 (lower is better)
Translates to: WQQFHRSPFVVRTWALGFVKKRH*NGMRVT
Trigger: TGTAACTCGCATCCCATTGCAGTGCCGTTTCTTGAC...GAAGCCAAGGGCCCACGTCCTCACCACAAAGGGACTCCTGTGAAACTGCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GGAAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTCTTTCCGCATACTGTTaGCCGTATGACTTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: GKPGRRGLQFQLQIREFLLSAYC*PYDFPV
Trigger: GACAGGAAAGTCATACGGGCAACAGTATGCGGAAAG...AAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GCGGCCATGTCCAGGACCACCCAGAATCAGCCATCTCTTTGCCAAGGTGTCTCATTCTCTGCAGGTATCTaGTCCCCTGTGTGTGCATGT +
Preference number: 4 (lower is better)
Translates to: AAMSRTTQNQPSLCQGVSFSAGI*SPVCAC
Trigger: ACATGCACACACAGGGGAGCAGATACCTGCAGAGAA...TGAGACACCTTGGCAAAGAGATGGCTGATTCTGGGTGGTCCTGGACATGGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CCA 90 bp AAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTCCCATAGGTGGAGGCATTaGTCTGGTATGCATAGTGGA +
Preference number: 4 (lower is better)
Translates to: KTGAPWAAVPAANTGVSSHRWRH*SGMHSG
Trigger: TCCACTATGCATACCAGACCAATGCCTCCACCTATG...GGAAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp TGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCTATTCTTCCGACGTCTGTaGCCCGCCGGCTCGAAAGGG +
Preference number: 4 (lower is better)
Translates to: CIYGVREFKQCGHSNFTLFFRRL*PAGSKG
Trigger: CCCTTTCGAGCCGGCGGGCCACAGACGTCGGAAGAA...TAGAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp CACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCAAAAACCGGGGCGCCGTaGGCTGCAGTTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: HNVSTGYASSNNVGTATSKTGAP*AAVPAA
Trigger: TGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTT...TGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp GCTTCAGTATGTACTAGACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTTCCCCGGTGAGAACTaGCCAACAGTCATTGCCTCG +
Preference number: 4 (lower is better)
Translates to: ASVCTRHRSRSYVEPQHGFPGEN*PTVIAS
Trigger: CGAGGCAATGACTGTTGGCCAGTTCTCACCGGGGAA...ACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTCTAGTACATACTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp TGCCTCGCCTCTTTAGTATGTTGTTTGACCAGAGAGGGACAGGGCGGGGAGGAAGGTCCAGGAGCTATGTaGAGCCTCAGCACGGTTAAT +
Preference number: 4 (lower is better)
Translates to: CLASLVCCLTREGQGGEEGPGAM*SLSTVN
Trigger: ATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACC...TTCCTCCCCGCCCTGTCCCTCTCTGGTCAAACAACATACTAAAGAGGCGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp CTGGACGCCACATTCCTCGGAGCTGACCACGATCTAAGGAAATGTTCATGCCATTTGGTGGGCAGCACTTaGGTGAGTTCAGTGCCCATC +
Preference number: 4 (lower is better)
Translates to: LDATFLGADHDLRKCSCHLVGST*VSSVPI
Trigger: GATGGGCACTGAACTCACTCAAGTGCTGCCCACCAA...ATGGCATGAACATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGTGGCGTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252854.8
CDS-3UTR TCA 90 bp GCTTCAGTATGTACTAGACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTCAGCTCGTTAAGCACTaGCGTCAGATTCTGGACCTC +
Preference number: 4 (lower is better)
Translates to: ASVCTRHRSRSYVEPQHGQLVKH*RQILDL
Trigger: GAGGTCCAGAATCTGACGTCAGTGCTTAACGAGCTG...ACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTCTAGTACATACTGAAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp CATGTTGTTGTAACCGGCATAGTCCAGGCTGCGGGTCTTGAGGATGGTCTCTGTCAGCTCGTTAAGCACTaGCGTCAGATTCTGGACCTC +
Preference number: 4 (lower is better)
Translates to: HVVVTGIVQAAGLEDGLCQLVKH*RQILDL
Trigger: GAGGTCCAGAATCTGACGTCAGTGCTTAACGAGCTG...ACAGAGACCATCCTCAAGACCCGCAGCCTGGACTATGCCGGTTACAACAACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR TCA 90 bp TGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCTACTGAGTAGCCGTTGGTaGCGTACAGCGTGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: CIYGVREFKQCGHSNFTLLSSRW*RTACRR
Trigger: TCTGCGGCACGCTGTACGTCACCAACGGCTACTCAG...TAGAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp ATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCTACTCGTCGGAGCGGATaGCGTGGAAGAGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: MYLRGTRVQTMWAQQLHSTRRSG*RGRGSR
Trigger: ACGTGACCCTCTTCCACGTCATCCGCTCCGACGAGT...AGAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp AAATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTGTATTCAAGGTTCCTAGAGCTTGGTGGTGTTaGGGCCCACCAGCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: KCSYSRMQRRILVVFKVPRAWWC*GPPARA
Trigger: TGCCCTCGCTGGTGGGCCTCAACACCACCAAGCTCT...AGGAACCTTGAATACAACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392991.8
CDS-3UTR GCA 90 bp GGAAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTTTTATCGCCTTAAACTaGCTGGCCAGGTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: GKPGRRGLQFQLQIREFLFIALN*LARCCL
Trigger: TAAGCAACACCTGGCCAGGCAGTTTAAGGCGATAAA...AAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp CACAGGAGTCCCTTTGTGGTGAGGACGTGGGCCCTTGGCTTCCAGGAGGAGGGAACCTCCTCTTTAAACTaGAATACCAATTTGGCATCG +
Preference number: 4 (lower is better)
Translates to: HRSPFVVRTWALGFQEEGTSSLN*NTNLAS
Trigger: CGATGCCAAATTGGTATTGCAGTTTAAAGAGGAGGT...TCCCTCCTCCTGGAAGCCAAGGGCCCACGTCCTCACCACAAAGGGACTCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp ACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGGCGCCAATTTCCTCTTaGAGCTCGTTAAGCACTGAC +
Preference number: 4 (lower is better)
Translates to: TVARMTFLSHRKPEFPQAAPISS*SSLSTD
Trigger: GTCAGTGCTTAACGAGCTGCAAGAGGAAATTGGCGC...CGCCTGGGGAAACTCTGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp ACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGCCGCAAGCTAGTTTTTaGATGCATGCACGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: TVARMTFLSHRKPEFPQAPQASF*MHARSL
Trigger: AAGGCTCCGTGCATGCATGCAAAAACTAGCTTGCGG...CGCCTGGGGAAACTCTGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp ATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCTCTCGTGTTCCAGGTCTaGAGGGTCTGCAGGGACACG +
Preference number: 4 (lower is better)
Translates to: MYLRGTRVQTMWAQQLHSLVFQV*RVCRDT
Trigger: CGTGTCCCTGCAGACCCTGCAGACCTGGAACACGAG...AGAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTACGGGGCGCCGTGGGCTaGAGTTCCAGCTGCAAATAC +
Preference number: 4 (lower is better)
Translates to: EFPQASPSYLRLHDLANLRGAVG*SSSCKY
Trigger: GTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCG...TAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GGATCCTGGTTGTATTCAAGGTTCCTTAGTGAAATGGTGCTAAGTATTGGAAAACCTGCCTTGCCCGGCTaGGTCCCTCCGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GSWLYSRFLSEMVLSIGKPALPG*VPPGSS
Trigger: GGAGGAGCCCGGAGGGACGCAGCCGGGCAAGGCAGG...TTTTCCAATACTTAGCACCATTTCACTAAGGAACCTTGAATACAACCAGGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392991.8
CDS-3UTR GCA 90 bp CCAGGGGTGGGGGAGACGGTGGGAGGTGAAATTGTCCGTGTTCATGAAGTCAACACCACACCTAGTTTTTaGATGCATGCACGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: PGVGETVGGEIVRVHEVNTTPSF*MHARSL
Trigger: AAGGCTCCGTGCATGCATGCAAAAACTAGGTGTGGT...GTTGACTTCATGAACACGGACAATTTCACCTCCCACCGTCTCCCCCACCCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR CCA 90 bp AAATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTGTATTCAAGGTTCCTCTGCCCTCGCTGTCCTaGGCAGAGCTGTACACCTGC +
Preference number: 4 (lower is better)
Translates to: KCSYSRMQRRILVVFKVPLPSLS*AELYTC
Trigger: GCAGGTGTACAGCTCTGCCCAGGACAGCGAGGGCAG...AGGAACCTTGAATACAACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CCA 90 bp ATGCCATCCCTCGATGTCAGAATCCGCACTGCTGATGATTTTTCAAGATCGGTACTGCCCTCGCTGTCCTaGGCAGAGCTGTACACCTGC +
Preference number: 4 (lower is better)
Translates to: MPSLDVRIRTADDFSRSVLPSLS*AELYTC
Trigger: GCAGGTGTACAGCTCTGCCCAGGACAGCGAGGGCAG...TACCGATCTTGAAAAATCATCAGCAGTGCGGATTCTGACATCGAGGGATGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp CTGGCTCTCTTTCATGGTTACATGGGAGTGGACTGCTTCTTCAGTCACTGCAGCCATCCCGTGAACACATaGTCTGCTGTGGAGCGACCA +
Preference number: 4 (lower is better)
Translates to: LALFHGYMGVDCFFSHCSHPVNT*SAVERP
Trigger: TGGTCGCTCCACAGCAGACCATGTGTTCACGGGATG...GCTGCAGTGACTGAAGAAGCAGTCCACTCCCATGTAACCATGAAAGAGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CCA 90 bp ACGTACTTTCCGCATACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAATGTTGCCAGCGTTCTaGTTGGTGGCGTACACGGCC +
Preference number: 4 (lower is better)
Translates to: TYFPHTVARMTFLSHRKPMLPAF*LVAYTA
Trigger: GGCCGTGTACGCCACCAACCAGAACGCTGGCAACAT...TGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGTATGCGGAAAGTACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp AATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCACAGGGCCCGGTCCTTaGGGTTGTAGTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: NVSTGYASSNNVGTATSLTGPGP*GCSPAW
Trigger: CCATGCTGGACTACAACCCCAAGGACCGGGCCCTGT...GAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp AGAAACACGGAGGTAATGCCATCCCTCGATGTCAGAATCCGCACTGCTGATGATTTTGTGGTGAGGACGTaGGCCCTTGGCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RNTEVMPSLDVRIRTADDFVVRT*ALGFQE
Trigger: CTCCTGGAAGCCAAGGGCCCACGTCCTCACCACAAA...ATCATCAGCAGTGCGGATTCTGACATCGAGGGATGGCATTACCTCCGTGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp GACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTAATCTAAGAGACAGCGGTCCAGGAGCTATGTaGAGCCTCAGCACGGTTAAT +
Preference number: 4 (lower is better)
Translates to: DTGPGAMWSLSTVNLRDSGPGAM*SLSTVN
Trigger: ATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACC...GCTGTCTCTTAGATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp GCTTCAGTATGTACTAGACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTCTCCTCCACCTGTTTaGACTTGGACTCCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: ASVCTRHRSRSYVEPQHGSPPPV*TWTPVL
Trigger: AAGGACTGGAGTCCAAGTTCAAACAGGTGGAGGAGA...ACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTCTAGTACATACTGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp ACATTCCTCGGAGCTGACCACGATCTAAGGAAATGTTCATGCCATCCTAACAGTCTGAGTAGCCGTTGGTaGCGTACAGCGTGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: TFLGADHDLRKCSCHPNSLSSRW*RTACRR
Trigger: TCTGCGGCACGCTGTACGTCACCAACGGCTACTCAG...ACTGTTAGGATGGCATGAACATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp TGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCTAGACCTTGGTACCCCCTaGGTAGCCGTTGGTGACGTA +
Preference number: 4 (lower is better)
Translates to: CIYGVREFKQCGHSNFTLDLGTP*VAVGDV
Trigger: TACGTCACCAACGGCTACTCAGGGGGTACCAAGGTC...TAGAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp AAGAGCCTGGACGCCACATTCCTCGGAGCTGACCACGATCTAAGGAAATGTTCATGGGTTTTTCCCCGGTaGGAACTGGCCAACAGTCAT +
Preference number: 4 (lower is better)
Translates to: KSLDATFLGADHDLRKCSWVFPR*ELANSH
Trigger: ATGACTGTTGGCCAGTTCTCACCGGGGAAAAACCCA...TGAACATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGTGGCGTCCAGGCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp GGGTGCGGCCATGTCCAGGACCACCCAGAATCAGCCATCTCTTTGCCAAGGTGTCTCTTTTATTTTGAGTaGGTTCAGTGCCCATCAGGA +
Preference number: 4 (lower is better)
Translates to: GCGHVQDHPESAISLPRCLFYFE*VQCPSG
Trigger: TCCTGATGGGCACTGAACTCACTCAAAATAAAAGAG...ACACCTTGGCAAAGAGATGGCTGATTCTGGGTGGTCCTGGACATGGCCGCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR TCA 90 bp CATCCCTCGATGTCAGAATCCGCACTGCTGATGATTTTTCAAGATCGGTATTGTAGAGCTTGGTGGTGTTaGGGCCCACCAGCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: HPSMSESALLMIFQDRYCRAWWC*GPPARA
Trigger: TGCCCTCGCTGGTGGGCCTCAACACCACCAAGCTCT...ACAATACCGATCTTGAAAAATCATCAGCAGTGCGGATTCTGACATCGAGGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371793.8
CDS-3UTR GCA 90 bp CATCCCTCGATGTCAGAATCCGCACTGCTGATGATTTTTCAAGATCGGTATTGTGGGTGCATGTCTCGCTaGCACCTCCAACGACCTGGC +
Preference number: 4 (lower is better)
Translates to: HPSMSESALLMIFQDRYCGCMSR*HLQRPG
Trigger: GCCAGGTCGTTGGAGGTGGCAGCGAGACATGCACCC...ACAATACCGATCTTGAAAAATCATCAGCAGTGCGGATTCTGACATCGAGGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252854.8
CDS-3UTR GCA 90 bp ACATTCCTCGGAGCTGACCACGATCTAAGGAAATGTTCATGCCATCCTAACAGTGTGGAGCGACCACTGTaGAGATACACCTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: TFLGADHDLRKCSCHPNSVERPL*RYTCPR
Trigger: GCGAGGGCAGGTGTATCTGCACAGTGGTCGCTCCAC...ACTGTTAGGATGGCATGAACATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp CATGAAATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTGTATTCAAGGTGTGGAGCGACCACTGTaGAGATACACCTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: HEMQLQSHAKEDPGCIQGVERPL*RYTCPR
Trigger: GCGAGGGCAGGTGTATCTGCACAGTGGTCGCTCCAC...ACCTTGAATACAACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATTTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR GCA 90 bp CTGCAATGGGATGCGAGTTACACTAGCCTACGGCCGGGTGCAGCCCATGGCTCTACCTCCTCTTTAAACTaGAATACCAATTTGGCATCG +
Preference number: 4 (lower is better)
Translates to: LQWDASYTSLRPGAAHGSTSSLN*NTNLAS
Trigger: CGATGCCAAATTGGTATTGCAGTTTAAAGAGGAGGT...AGAGCCATGGGCTGCACCCGGCCGTAGGCTAGTGTAACTCGCATCCCATTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp AAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTCCCAAGATTGGACACTCTaGTCTGAAGTTCATCGTAGT +
Preference number: 4 (lower is better)
Translates to: KTGAPWAAVPAANTGVSSQDWTL*SEVHRS
Trigger: ACTACGATGAACTTCAGAGCAGAGTGTCCAATCTTG...GGAAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GCTTCAGTATGTACTAGACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTGGCTGCAGTTCCAGCTaGAAATACGGGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: ASVCTRHRSRSYVEPQHGGCSSS*KYGSFF
Trigger: GAAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCC...ACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTCTAGTACATACTGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp TTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTAACACGGGGCGCCGTGGGCTaGAGTTCCAGCTGCAAATAC +
Preference number: 4 (lower is better)
Translates to: FPQASPSYLRLHDLANLTRGAVG*SSSCKY
Trigger: GTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCG...TGTTAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp ACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGCTGGCCAACAGTCATTaGCTCGCCTCTTTAGTATGT +
Preference number: 4 (lower is better)
Translates to: TVARMTFLSHRKPEFPQALANSH*LASLVC
Trigger: ACATACTAAAGAGGCGAGGCAATGACTGTTGGCCAG...CGCCTGGGGAAACTCTGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp ACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGGTCAAGAAACGGCACTaGAATGGGATGCGAGTTACA +
Preference number: 4 (lower is better)
Translates to: TVARMTFLSHRKPEFPQAVKKRH*NGMRVT
Trigger: TGTAACTCGCATCCCATTGCAGTGCCGTTTCTTGAC...CGCCTGGGGAAACTCTGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp CCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTGCCTTTCTTCAAGATTaGACACTCTGCTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: PVPSETRVSPGEPFLSAVAFLQD*TLCSEV
Trigger: AACTTCAGAGCAGAGTGTCCAATCTTGAAGAAAGGC...AACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTCTGGTTTCCGATGGGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp TGGCAGCAGTTTCACAGGAGTCCCTTTGTGGTGAGGACGTGGGCCCTTGGCTTCTCCAGCATGGAGATGTaGGAGTATTTGTTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: WQQFHRSPFVVRTWALGFSSMEM*EYLFWN
Trigger: ATTCCAGAACAAATACTCCCACATCTCCATGCTGGA...GAAGCCAAGGGCCCACGTCCTCACCACAAAGGGACTCCTGTGAAACTGCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp AGTTACCACCTCAAGGGAATAACAGAAGAACGTTGCACAATGTATCTACGGGGTAAAACCGGGGCGCCGTaGGCTGCAGTTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SYHLKGITEERCTMYLRGKTGAP*AAVPAA
Trigger: TGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTT...ACCCCGTAGATACATTGTGCAACGTTCTTCTGTTATTCCCTTGAGGTGGTAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp AGTTACCACCTCAAGGGAATAACAGAAGAACGTTGCACAATGTATCTACGGGGTGCCGGGTGCAGCCCATaGCTCTCAAAGAGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: SYHLKGITEERCTMYLRGAGCSP*LSKSLD
Trigger: GTCCAGGCTCTTTGAGAGCCATGGGCTGCACCCGGC...ACCCCGTAGATACATTGTGCAACGTTCTTCTGTTATTCCCTTGAGGTGGTAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp CTGGACGCCACATTCCTCGGAGCTGACCACGATCTAAGGAAATGTTCATGCCATGGTCCAGGAGCTATGTaGAGCCTCAGCACGGTTAAT +
Preference number: 4 (lower is better)
Translates to: LDATFLGADHDLRKCSCHGPGAM*SLSTVN
Trigger: ATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACC...ATGGCATGAACATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGTGGCGTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp TTCAAACTATTCATGAAATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTAGCTCTCCTCAGGGTTaGTGGGCAGCACGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: FKLFMKCSYSRMQRRILVSSPQG*WAARRC
Trigger: GCACCGGCGTGCTGCCCACCAACCCTGAGGAGAGCT...AACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATTTCATGAATAGTTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392991.8
CDS-3UTR TCA 90 bp GAAATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTGTATTCAAGGTTCCTGGGCAGCACTTGAGTaGGTTCAGTGCCCATCAGGA +
Preference number: 4 (lower is better)
Translates to: EMQLQSHAKEDPGCIQGSWAALE*VQCPSG
Trigger: TCCTGATGGGCACTGAACTCACTCAAGTGCTGCCCA...GGAACCTTGAATACAACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277415.15
CDS-3UTR TCA 90 bp GCACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCCAGCTCGTTAAGCACTaGCGTCAGATTCTGGACCTC +
Preference number: 4 (lower is better)
Translates to: AQCIYGVREFKQCGHSNFQLVKH*RQILDL
Trigger: GAGGTCCAGAATCTGACGTCAGTGCTTAACGAGCTG...GAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp CATCCCTCGATGTCAGAATCCGCACTGCTGATGATTTTTCAAGATCGGTATTGTCTGAGTAGCCGTTGGTaGCGTACAGCGTGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: HPSMSESALLMIFQDRYCLSSRW*RTACRR
Trigger: TCTGCGGCACGCTGTACGTCACCAACGGCTACTCAG...ACAATACCGATCTTGAAAAATCATCAGCAGTGCGGATTCTGACATCGAGGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp CATCCCTCGATGTCAGAATCCGCACTGCTGATGATTTTTCAAGATCGGTATTGTACTCGTCGGAGCGGATaGCGTGGAAGAGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: HPSMSESALLMIFQDRYCTRRSG*RGRGSR
Trigger: ACGTGACCCTCTTCCACGTCATCCGCTCCGACGAGT...ACAATACCGATCTTGAAAAATCATCAGCAGTGCGGATTCTGACATCGAGGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp CTGGACGCCACATTCCTCGGAGCTGACCACGATCTAAGGAAATGTTCATGCCATCACATTCCTCGGAGCTaGCCACGATCTAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: LDATFLGADHDLRKCSCHHIPRS*PRSKEM
Trigger: CATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGTG...ATGGCATGAACATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGTGGCGTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp ATTGATACATTGTTCAGGGTACGACAAGCCCGTTTGAAATGCCCACGATCCCCATACGACAAGCCCGTTTaGAATGCCCACGATCCCCAC +
Preference number: 4 (lower is better)
Translates to: IDTLFRVRQARLKCPRSPYDKPV*NAHDPH
Trigger: GTGGGGATCGTGGGCATTTCAAACGGGCTTGTCGTA...TGGGGATCGTGGGCATTTCAAACGGGCTTGTCGTACCCTGAACAATGTATCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS-3UTR GCA 90 bp AAGCTCTCTGGCTCTCTTTCATGGTTACATGGGAGTGGACTGCTTCTTCAGTCACGTGAACACATGGTCTaGTGTGGAGCGACCACTGTG +
Preference number: 4 (lower is better)
Translates to: KLSGSLSWLHGSGLLLQSREHMV*CGATTV
Trigger: CACAGTGGTCGCTCCACAGCAGACCATGTGTTCACG...TGACTGAAGAAGCAGTCCACTCCCATGTAACCATGAAAGAGAGCCAGAGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR GCA 90 bp AATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCCGTGAACACATGGTCTaGTGTGGAGCGACCACTGTG +
Preference number: 4 (lower is better)
Translates to: NVSTGYASSNNVGTATSLREHMV*CGATTV
Trigger: CACAGTGGTCGCTCCACAGCAGACCATGTGTTCACG...GAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GCAAAAAGCTCTCTGGCTCTCTTTCATGGTTACATGGGAGTGGACTGCTTCTTCGCCTCAGCTGTTTTGTaGGGGCATCCCGTGAACACA +
Preference number: 4 (lower is better)
Translates to: AKSSLALFHGYMGVDCFFASAVL*GHPVNT
Trigger: TGTGTTCACGGGATGCCCGCACAAAACAGCTGAGGC...GAAGAAGCAGTCCACTCCCATGTAACCATGAAAGAGAGCCAGAGAGCTTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR GCA 90 bp ATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCTGCCTCAGCTGTTTTGTaGGGGCATCCCGTGAACACA +
Preference number: 4 (lower is better)
Translates to: MYLRGTRVQTMWAQQLHSASAVL*GHPVNT
Trigger: TGTGTTCACGGGATGCCCGCACAAAACAGCTGAGGC...AGAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GCACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACCTTCTCCAGTAGCTaGCTCAGCTGTTTTGTGCGG +
Preference number: 4 (lower is better)
Translates to: AQCIYGVREFKQCGHSNFTFSSS*LSCFVR
Trigger: CCGCACAAAACAGCTGAGGCAGCTACTGGAGAAGGT...GAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp CCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTCTAAGGAAATGTTCATaGCATCCTAACAGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: PVPSETRVSPGEPFLSAVLRKCS*HPNSGF
Trigger: AAACCCACTGTTAGGATGGCATGAACATTTCCTTAG...AACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTCTGGTTTCCGATGGGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp AAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTCCATAACAGAAGAACGTTaGACAATGTATCTACGGGGT +
Preference number: 4 (lower is better)
Translates to: KTGAPWAAVPAANTGVSSITEER*TMYLRG
Trigger: ACCCCGTAGATACATTGTGCAACGTTCTTCTGTTAT...GGAAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GGAAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTATAACAGAAGAACGTTaGACAATGTATCTACGGGGT +
Preference number: 4 (lower is better)
Translates to: GKPGRRGLQFQLQIREFLITEER*TMYLRG
Trigger: ACCCCGTAGATACATTGTGCAACGTTCTTCTGTTAT...AAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp TTCAAACTATTCATGAAATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTCTGCCCTCGCTGTCCTaGGCAGAGCTGTACACCTGC +
Preference number: 4 (lower is better)
Translates to: FKLFMKCSYSRMQRRILVLPSLS*AELYTC
Trigger: GCAGGTGTACAGCTCTGCCCAGGACAGCGAGGGCAG...AACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATTTCATGAATAGTTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CCA 90 bp TCTGGCTCTCTTTCATGGTTACATGGGAGTGGACTGCTTCTTCAGTCACTGCAGACACATGGTCTGCTGTaGAGCGACCACTGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: SGSLSWLHGSGLLLQSLQTHGLL*SDHCAD
Trigger: ATCTGCACAGTGGTCGCTCCACAGCAGACCATGTGT...CTGCAGTGACTGAAGAAGCAGTCCACTCCCATGTAACCATGAAAGAGAGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CCA 90 bp ACGTACTTTCCGCATACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAACACATGGTCTGCTGTaGAGCGACCACTGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: TYFPHTVARMTFLSHRKPTHGLL*SDHCAD
Trigger: ATCTGCACAGTGGTCGCTCCACAGCAGACCATGTGT...TGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGTATGCGGAAAGTACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp GACCACGATCTAAGGAAATGTTCATGCCATCCTAACAGTGGGTTTTTCCCCGGTCATCCCGTGAACACATaGTCTGCTGTGGAGCGACCA +
Preference number: 4 (lower is better)
Translates to: DHDLRKCSCHPNSGFFPGHPVNT*SAVERP
Trigger: TGGTCGCTCCACAGCAGACCATGTGTTCACGGGATG...ACCGGGGAAAAACCCACTGTTAGGATGGCATGAACATTTCCTTAGATCGTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp TGCCTCGCCTCTTTAGTATGTTGTTTGACCAGAGAGGGACAGGGCGGGGAGGAACGATGTATTCATAGGTaGAGGCATTGGTCTGGTATG +
Preference number: 4 (lower is better)
Translates to: CLASLVCCLTREGQGGEERCIHR*RHWSGM
Trigger: CATACCAGACCAATGCCTCCACCTATGAATACATCG...TTCCTCCCCGCCCTGTCCCTCTCTGGTCAAACAACATACTAAAGAGGCGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp CCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTTGGGAGTATTTGTTCTaGAATGGGATGTCGATGTAT +
Preference number: 4 (lower is better)
Translates to: PVPSETRVSPGEPFLSAVWEYLF*NGMSMY
Trigger: ATACATCGACATCCCATTCCAGAACAAATACTCCCA...AACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTCTGGTTTCCGATGGGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp AGTTCCAGCTGCAAATACGGGAGTTTCTTCCGACGTCTGTGGCCCGCCGGCTCGTTATTGGTATCTTTTTaGCAGCAGTTTCACAGGAGT +
Preference number: 4 (lower is better)
Translates to: SSSCKYGSFFRRLWPAGSLLVSF*QQFHRS
Trigger: ACTCCTGTGAAACTGCTGCCAAAAAGATACCAATAA...CGAGCCGGCGGGCCACAGACGTCGGAAGAAACTCCCGTATTTGCAGCTGGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp GACCACGATCTAAGGAAATGTTCATGCCATCCTAACAGTGGGTTTTTCCCCGGTTTCCCCGGTGAGAACTaGCCAACAGTCATTGCCTCG +
Preference number: 4 (lower is better)
Translates to: DHDLRKCSCHPNSGFFPGFPGEN*PTVIAS
Trigger: CGAGGCAATGACTGTTGGCCAGTTCTCACCGGGGAA...ACCGGGGAAAAACCCACTGTTAGGATGGCATGAACATTTCCTTAGATCGTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp TCCAGGACCACCCAGAATCAGCCATCTCTTTGCCAAGGTGTCTCAATAAGACACCCACTAATCAGGACCTaGTTGGCTCTTCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SRTTQNQPSLCQGVSIRHPLIRT*LALLCR
Trigger: CCTGCAGAGAAGAGCCAACCAGGTCCTGATTAGTGG...GTGTCTTATTGAGACACCTTGGCAAAGAGATGGCTGATTCTGGGTGGTCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371799.8
3UTR CAA 72 bp TCTATTGATACATTGTTCAGGGTACGACAAGCCCGTTaGAAATGCCCACGATCCCCACACCAGCACGCCACA +
Preference number: 4 (lower is better)
Translates to: SIDTLFRVRQAR*KCPRSPHQHAT
Trigger: TGTGGCGTGCTGGTGTGGGGATCGTGGGCATTTCAAACGGGCTTGTCGTACCCTGAACAATGTATCAATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS-3UTR TCA 90 bp TATGTACTAGACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTAATCTACAGCTCGTTAAGCACTaGCGTCAGATTCTGGACCTC +
Preference number: 4 (lower is better)
Translates to: YVLDTGPGAMWSLSTVNLQLVKH*RQILDL
Trigger: GAGGTCCAGAATCTGACGTCAGTGCTTAACGAGCTG...TAGATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTCTAGTACATA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp AAATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTGTATTCAAGGTTCCTGCCTCAGCTGTTTTGTaGGGGCATCCCGTGAACACA +
Preference number: 4 (lower is better)
Translates to: KCSYSRMQRRILVVFKVPASAVL*GHPVNT
Trigger: TGTGTTCACGGGATGCCCGCACAAAACAGCTGAGGC...AGGAACCTTGAATACAACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR GCA 90 bp GACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTAATCTAAGAGACAGCTTTATCGCCTTAAACTaGCTGGCCAGGTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: DTGPGAMWSLSTVNLRDSFIALN*LARCCL
Trigger: TAAGCAACACCTGGCCAGGCAGTTTAAGGCGATAAA...GCTGTCTCTTAGATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp TGCCTCGCCTCTTTAGTATGTTGTTTGACCAGAGAGGGACAGGGCGGGGAGGAAAAGCTAGTTTTTGCATaGATGCACGGAGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: CLASLVCCLTREGQGGEEKLVFA*MHGAFL
Trigger: AAGAAAGGCTCCGTGCATGCATGCAAAAACTAGCTT...TTCCTCCCCGCCCTGTCCCTCTCTGGTCAAACAACATACTAAAGAGGCGAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GTGCAAAAAGCTCTCTGGCTCTCTTTCATGGTTACATGGGAGTGGACTGCTTCTGCAGCTACAGTCGCATaGAAAGGAGGATCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: VQKALWLSFMVTWEWTASAATVA*KGGSWL
Trigger: CAACCAGGATCCTCCTTTGCATGCGACTGTAGCTGC...AGAAGCAGTCCACTCCCATGTAACCATGAAAGAGAGCCAGAGAGCTTTTTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR GCA 90 bp GATGATTTTTCAAGATCGGTATTGTTAGTGTTATTGGTATCTTTTTGGCAGCAGCATCGCGCCTCGAGCTaGCTCCAGCGCCCGCTCCGA +
Preference number: 4 (lower is better)
Translates to: DDFSRSVLLVLLVSFWQQHRASS*LQRPLR
Trigger: TCGGAGCGGGCGCTGGAGGCAGCTCGAGGCGCGATG...CTGCTGCCAAAAAGATACCAATAACACTAACAATACCGATCTTGAAAAATCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371793.8
CDS-3UTR GCA 90 bp CATGTTGTTGTAACCGGCATAGTCCAGGCTGCGGGTCTTGAGGATGGTCTCTGTCACCTAGTTTTTGCATaGATGCACGGAGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: HVVVTGIVQAAGLEDGLCHLVFA*MHGAFL
Trigger: AAGAAAGGCTCCGTGCATGCATGCAAAAACTAGGTG...ACAGAGACCATCCTCAAGACCCGCAGCCTGGACTATGCCGGTTACAACAACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR CCA 90 bp AAGCTCTCTGGCTCTCTTTCATGGTTACATGGGAGTGGACTGCTTCTTCAGTCAACACATGGTCTGCTGTaGAGCGACCACTGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: KLSGSLSWLHGSGLLLQSTHGLL*SDHCAD
Trigger: ATCTGCACAGTGGTCGCTCCACAGCAGACCATGTGT...TGACTGAAGAAGCAGTCCACTCCCATGTAACCATGAAAGAGAGCCAGAGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CCA 90 bp GTCAAACCTGATGATGATGTGGCTCTGGAACTTGTTGAAGTAGATAGAACCGTTGGGTGGGGGAGACGGTaGGAGGTGAAATTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: VKPDDDVALELVEVDRTVGWGRR*EVKLSV
Trigger: CACGGACAATTTCACCTCCCACCGTCTCCCCCACCC...AACGGTTCTATCTACTTCAACAAGTTCCAGAGCCACATCATCATCAGGTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR CCA 90 bp TATGTACTAGACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTAATCTAATGCATAGTGGACCTTaGTACCCCCTGAGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: YVLDTGPGAMWSLSTVNLMHSGP*YPLSSR
Trigger: ACGGCTACTCAGGGGGTACCAAGGTCCACTATGCAT...TAGATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTCTAGTACATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp TGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCTAATGCATAGTGGACCTTaGTACCCCCTGAGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: CIYGVREFKQCGHSNFTLMHSGP*YPLSSR
Trigger: ACGGCTACTCAGGGGGTACCAAGGTCCACTATGCAT...TAGAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp CTGCAATGGGATGCGAGTTACACTAGCCTACGGCCGGGTGCAGCCCATGGCTCTGTATTTGTTCTGGAATaGGATGTCGATGTATTCATA +
Preference number: 4 (lower is better)
Translates to: LQWDASYTSLRPGAAHGSVFVLE*DVDVFI
Trigger: TATGAATACATCGACATCCCATTCCAGAACAAATAC...AGAGCCATGGGCTGCACCCGGCCGTAGGCTAGTGTAACTCGCATCCCATTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp GAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTATTCCCCGGTGAGAACTaGCCAACAGTCATTGCCTCG +
Preference number: 4 (lower is better)
Translates to: EFPQASPSYLRLHDLANLFPGEN*PTVIAS
Trigger: CGAGGCAATGACTGTTGGCCAGTTCTCACCGGGGAA...TAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR CAA 72 bp GTGGGTTTTTCCCCGGTGAGAACTGGCCAACAGTCATaGCCTCGCCTCTTTAGTATGTTGTTTGACCAGAGA +
Preference number: 4 (lower is better)
Translates to: VGFSPVRTGQQS*PRLFSMLFDQR
Trigger: TCTCTGGTCAAACAACATACTAAAGAGGCGAGGCAATGACTGTTGGCCAGTTCTCACCGGGGAAAAACCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp AGTTACCACCTCAAGGGAATAACAGAAGAACGTTGCACAATGTATCTACGGGGTTGGGCAGCACTTGAGTaGGTTCAGTGCCCATCAGGA +
Preference number: 4 (lower is better)
Translates to: SYHLKGITEERCTMYLRGWAALE*VQCPSG
Trigger: TCCTGATGGGCACTGAACTCACTCAAGTGCTGCCCA...ACCCCGTAGATACATTGTGCAACGTTCTTCTGTTATTCCCTTGAGGTGGTAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252854.8
CDS-3UTR TCA 90 bp ACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACCACATTCCTCGGAGCTaGCCACGATCTAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: TMYLRGTRVQTMWAQQLHHIPRS*PRSKEM
Trigger: CATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGTG...GTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp GACCACGATCTAAGGAAATGTTCATGCCATCCTAACAGTGGGTTTTTCCCCGGTATACTGTTGCCCGTATaGCTTTCCTGTCCCATCGGA +
Preference number: 4 (lower is better)
Translates to: DHDLRKCSCHPNSGFFPGILLPV*LSCPIG
Trigger: TCCGATGGGACAGGAAAGTCATACGGGCAACAGTAT...ACCGGGGAAAAACCCACTGTTAGGATGGCATGAACATTTCCTTAGATCGTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp ACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACATACTGTTGCCCGTATaGCTTTCCTGTCCCATCGGA +
Preference number: 4 (lower is better)
Translates to: TMYLRGTRVQTMWAQQLHILLPV*LSCPIG
Trigger: TCCGATGGGACAGGAAAGTCATACGGGCAACAGTAT...GTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp CATCCCTCGATGTCAGAATCCGCACTGCTGATGATTTTTCAAGATCGGTATTGTCGTGAACACATGGTCTaGTGTGGAGCGACCACTGTG +
Preference number: 4 (lower is better)
Translates to: HPSMSESALLMIFQDRYCREHMV*CGATTV
Trigger: CACAGTGGTCGCTCCACAGCAGACCATGTGTTCACG...ACAATACCGATCTTGAAAAATCATCAGCAGTGCGGATTCTGACATCGAGGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp AAATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTGTATTCAAGGTTCCTACCTTCTCCAGTAGCTaGCTCAGCTGTTTTGTGCGG +
Preference number: 4 (lower is better)
Translates to: KCSYSRMQRRILVVFKVPTFSSS*LSCFVR
Trigger: CCGCACAAAACAGCTGAGGCAGCTACTGGAGAAGGT...AGGAACCTTGAATACAACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR GCA 90 bp GTAGTGGTACATGTTGTTGTAACCGGCATAGTCCAGGCTGCGGGTCTTGAGGATTTTATCGCCTTAAACTaGCTGGCCAGGTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: VVVHVVVTGIVQAAGLEDFIALN*LARCCL
Trigger: TAAGCAACACCTGGCCAGGCAGTTTAAGGCGATAAA...ATCCTCAAGACCCGCAGCCTGGACTATGCCGGTTACAACAACATGTACCACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR GCA 90 bp AATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCGGCTGCAGTTCCAGCTaGAAATACGGGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: NVSTGYASSNNVGTATSLGCSSS*KYGSFF
Trigger: GAAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCC...GAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp ACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGCTAAGGAAATGTTCATaGCATCCTAACAGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: TVARMTFLSHRKPEFPQALRKCS*HPNSGF
Trigger: AAACCCACTGTTAGGATGGCATGAACATTTCCTTAG...CGCCTGGGGAAACTCTGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp CATGAAATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTGTATTCAAGGTGCAGCTACAGTCGCATaGAAAGGAGGATCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: HEMQLQSHAKEDPGCIQGAATVA*KGGSWL
Trigger: CAACCAGGATCCTCCTTTGCATGCGACTGTAGCTGC...ACCTTGAATACAACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CCA 90 bp GAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTAACACATGGTCTGCTGTaGAGCGACCACTGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: EFPQASPSYLRLHDLANLTHGLL*SDHCAD
Trigger: ATCTGCACAGTGGTCGCTCCACAGCAGACCATGTGT...TAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp GACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTAATCTAAGAGACAGCACTGCAATACCAATTTaGCATCGGCCTTGTACTCTT +
Preference number: 4 (lower is better)
Translates to: DTGPGAMWSLSTVNLRDSTAIPI*HRPCTL
Trigger: AAGAGTACAAGGCCGATGCCAAATTGGTATTGCAGT...GCTGTCTCTTAGATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp GTCCAGGCTGCGGGTCTTGAGGATGGTCTCTGTCTTCAGGTCAAACCTGATGATACTGCAATACCAATTTaGCATCGGCCTTGTACTCTT +
Preference number: 4 (lower is better)
Translates to: VQAAGLEDGLCLQVKPDDTAIPI*HRPCTL
Trigger: AAGAGTACAAGGCCGATGCCAAATTGGTATTGCAGT...ATCATCAGGTTTGACCTGAAGACAGAGACCATCCTCAAGACCCGCAGCCTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR CCA 90 bp CCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTGTATTTGTTCTGGAATaGGATGTCGATGTATTCATA +
Preference number: 4 (lower is better)
Translates to: PVPSETRVSPGEPFLSAVVFVLE*DVDVFI
Trigger: TATGAATACATCGACATCCCATTCCAGAACAAATAC...AACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTCTGGTTTCCGATGGGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp TATGTACTAGACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTAATCTAGAAACGGCACTGCAATaGGATGCGAGTTACACTAGC +
Preference number: 4 (lower is better)
Translates to: YVLDTGPGAMWSLSTVNLETALQ*DASYTS
Trigger: GCTAGTGTAACTCGCATCCCATTGCAGTGCCGTTTC...TAGATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTCTAGTACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp AATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCGAAACGGCACTGCAATaGGATGCGAGTTACACTAGC +
Preference number: 4 (lower is better)
Translates to: NVSTGYASSNNVGTATSLETALQ*DASYTS
Trigger: GCTAGTGTAACTCGCATCCCATTGCAGTGCCGTTTC...GAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp GTCGCATGCAAAGGAGGATCCTGGTTGTATTCAAGGTTCCTTAGTGAAATGGTGTCTCCTCCACCTGTTTaGACTTGGACTCCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: VACKGGSWLYSRFLSEMVSPPPV*TWTPVL
Trigger: AAGGACTGGAGTCCAAGTTCAAACAGGTGGAGGAGA...CACCATTTCACTAAGGAACCTTGAATACAACCAGGATCCTCCTTTGCATGCGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR TCA 90 bp GACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTAATCTAAGAGACAGCAATCATCGCATAAACTaGACATACGAAGTTACCACC +
Preference number: 4 (lower is better)
Translates to: DTGPGAMWSLSTVNLRDSNHRIN*TYEVTT
Trigger: GGTGGTAACTTCGTATGTTCAGTTTATGCGATGATT...GCTGTCTCTTAGATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp GCTTCAGTATGTACTAGACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTAATCATCGCATAAACTaGACATACGAAGTTACCACC +
Preference number: 4 (lower is better)
Translates to: ASVCTRHRSRSYVEPQHGNHRIN*TYEVTT
Trigger: GGTGGTAACTTCGTATGTTCAGTTTATGCGATGATT...ACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTCTAGTACATACTGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp CTGGCTCTCTTTCATGGTTACATGGGAGTGGACTGCTTCTTCAGTCACTGCAGCGGTTCAAACTATTCATaGAATGCAGCTACAGTCGCA +
Preference number: 4 (lower is better)
Translates to: LALFHGYMGVDCFFSHCSGSNYS*NAATVA
Trigger: TGCGACTGTAGCTGCATTTCATGAATAGTTTGAACC...GCTGCAGTGACTGAAGAAGCAGTCCACTCCCATGTAACCATGAAAGAGAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR GCA 90 bp CAGTTTAGAATGCAACATCTTAAGGTTACATGCTTTGAGTCACATACACGAAGTGGGTGCATGTCTCGCTaGCACCTCCAACGACCTGGC +
Preference number: 4 (lower is better)
Translates to: QFRMQHLKVTCFESHTRSGCMSR*HLQRPG
Trigger: GCCAGGTCGTTGGAGGTGGCAGCGAGACATGCACCC...ACTTCGTGTATGTGACTCAAAGCATGTAACCTTAAGATGTTGCATTCTAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277415.15
CDS-3UTR GCA 90 bp TTCAAACTATTCATGAAATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTCGTGAACACATGGTCTaGTGTGGAGCGACCACTGTG +
Preference number: 4 (lower is better)
Translates to: FKLFMKCSYSRMQRRILVREHMV*CGATTV
Trigger: CACAGTGGTCGCTCCACAGCAGACCATGTGTTCACG...AACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATTTCATGAATAGTTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR GCA 90 bp TTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTAACAACCTTCTCCAGTAGCTaGCTCAGCTGTTTTGTGCGG +
Preference number: 4 (lower is better)
Translates to: FPQASPSYLRLHDLANLTTFSSS*LSCFVR
Trigger: CCGCACAAAACAGCTGAGGCAGCTACTGGAGAAGGT...TGTTAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTAGCGCCAATTTCCTCTTaGAGCTCGTTAAGCACTGAC +
Preference number: 4 (lower is better)
Translates to: EFPQASPSYLRLHDLANLAPISS*SSLSTD
Trigger: GTCAGTGCTTAACGAGCTGCAAGAGGAAATTGGCGC...TAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp CTGGACGCCACATTCCTCGGAGCTGACCACGATCTAAGGAAATGTTCATGCCATCAAGATTGGACACTCTaGTCTGAAGTTCATCGTAGT +
Preference number: 4 (lower is better)
Translates to: LDATFLGADHDLRKCSCHQDWTL*SEVHRS
Trigger: ACTACGATGAACTTCAGAGCAGAGTGTCCAATCTTG...ATGGCATGAACATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGTGGCGTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GCGGGTCTTGAGGATGGTCTCTGTCTTCAGGTCAAACCTGATGATGATGTGGCTCAAGATTGGACACTCTaGTCTGAAGTTCATCGTAGT +
Preference number: 4 (lower is better)
Translates to: AGLEDGLCLQVKPDDDVAQDWTL*SEVHRS
Trigger: ACTACGATGAACTTCAGAGCAGAGTGTCCAATCTTG...AGCCACATCATCATCAGGTTTGACCTGAAGACAGAGACCATCCTCAAGACCCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR GCA 90 bp TATGTACTAGACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTAATCTAGTCAAGAAACGGCACTaGAATGGGATGCGAGTTACA +
Preference number: 4 (lower is better)
Translates to: YVLDTGPGAMWSLSTVNLVKKRH*NGMRVT
Trigger: TGTAACTCGCATCCCATTGCAGTGCCGTTTCTTGAC...TAGATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTCTAGTACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp CTCTTTCATGGTTACATGGGAGTGGACTGCTTCTTCAGTCACTGCAGCATTGAATACATGGGAGTGGACTaGTTCTTCAGTCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: LFHGYMGVDCFFSHCSIEYMGVD*FFSHCS
Trigger: GCTGCAGTGACTGAAGAAGCAGTCCACTCCCATGTA...TTCAATGCTGCAGTGACTGAAGAAGCAGTCCACTCCCATGTAACCATGAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR GCA 90 bp CATGAAATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTGTATTCAAGGTTACATGGGAGTGGACTaGTTCTTCAGTCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: HEMQLQSHAKEDPGCIQGYMGVD*FFSHCS
Trigger: GCTGCAGTGACTGAAGAAGCAGTCCACTCCCATGTA...ACCTTGAATACAACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATTTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CCA 90 bp AATAATAGTAAAAATGCATGGTGCAAAAAGCTCTCTGGCTCTCTTTCATGGTTATCGTGTCCCCACGCCTaGATTCAGCACCCGGAGCGG +
Preference number: 4 (lower is better)
Translates to: NNSKNAWCKKLSGSLSWLSCPHA*IQHPER
Trigger: CCGCTCCGGGTGCTGAATCCAGGCGTGGGGACACGA...TAACCATGAAAGAGAGCCAGAGAGCTTTTTGCACCATGCATTTTTACTATTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000277415.15
CDS-3UTR CCA 90 bp GATGATTTTTCAAGATCGGTATTGTTAGTGTTATTGGTATCTTTTTGGCAGCAGCCACCTCCAACGACCTaGCATGCAGGGCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: DDFSRSVLLVLLVSFWQQPPPTT*HAGPWV
Trigger: CACCCAGGGCCCTGCATGCCAGGTCGTTGGAGGTGG...CTGCTGCCAAAAAGATACCAATAACACTAACAATACCGATCTTGAAAAATCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252854.8
CDS-3UTR CCA 90 bp TTTGGGAAAGGTCTTTATTGTCAGTTTAGAATGCAACATCTTAAGGTTACATGCCCACCTCCAACGACCTaGCATGCAGGGCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FGKGLYCQFRMQHLKVTCPPPTT*HAGPWV
Trigger: CACCCAGGGCCCTGCATGCCAGGTCGTTGGAGGTGG...GCATGTAACCTTAAGATGTTGCATTCTAAACTGACAATAAAGACCTTTCCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277415.15
CDS-3UTR CCA 90 bp AAACCTGATGATGATGTGGCTCTGGAACTTGTTGAAGTAGATAGAACCGTTGTAATGTTGCCAGCGTTCTaGTTGGTGGCGTACACGGCC +
Preference number: 4 (lower is better)
Translates to: KPDDDVALELVEVDRTVVMLPAF*LVAYTA
Trigger: GGCCGTGTACGCCACCAACCAGAACGCTGGCAACAT...TACAACGGTTCTATCTACTTCAACAAGTTCCAGAGCCACATCATCATCAGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR CCA 90 bp ACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACCATAGGTGGAGGCATTaGTCTGGTATGCATAGTGGA +
Preference number: 4 (lower is better)
Translates to: TMYLRGTRVQTMWAQQLHHRWRH*SGMHSG
Trigger: TCCACTATGCATACCAGACCAATGCCTCCACCTATG...GTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp TATGTACTAGACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTAATCTACATAGGTGGAGGCATTaGTCTGGTATGCATAGTGGA +
Preference number: 4 (lower is better)
Translates to: YVLDTGPGAMWSLSTVNLHRWRH*SGMHSG
Trigger: TCCACTATGCATACCAGACCAATGCCTCCACCTATG...TAGATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTCTAGTACATA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp AAGCTCTCTGGCTCTCTTTCATGGTTACATGGGAGTGGACTGCTTCTTCAGTCATCTGGCTCTCTTTCATaGTTACATGGGAGTGGACTG +
Preference number: 4 (lower is better)
Translates to: KLSGSLSWLHGSGLLLQSSGSLS*LHGSGL
Trigger: CAGTCCACTCCCATGTAACCATGAAAGAGAGCCAGA...TGACTGAAGAAGCAGTCCACTCCCATGTAACCATGAAAGAGAGCCAGAGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CCA 90 bp GATGATTTTTCAAGATCGGTATTGTTAGTGTTATTGGTATCTTTTTGGCAGCAGTCTCCTCAGGGTTGGTaGGCAGCACGCCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: DDFSRSVLLVLLVSFWQQSPQGW*AARRCC
Trigger: GCAGCACCGGCGTGCTGCCCACCAACCCTGAGGAGA...CTGCTGCCAAAAAGATACCAATAACACTAACAATACCGATCTTGAAAAATCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371793.8
CDS-3UTR CCA 90 bp GATGATTTTTCAAGATCGGTATTGTTAGTGTTATTGGTATCTTTTTGGCAGCAGAGCTCTCCTCAGGGTTaGTGGGCAGCACGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: DDFSRSVLLVLLVSFWQQSSPQG*WAARRC
Trigger: GCACCGGCGTGCTGCCCACCAACCCTGAGGAGAGCT...CTGCTGCCAAAAAGATACCAATAACACTAACAATACCGATCTTGAAAAATCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371793.8
CDS-3UTR TCA 90 bp ACGTACTTTCCGCATACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAAATTGTCCGTGTTCATaGAGTCAACCATGGACTTGT +
Preference number: 4 (lower is better)
Translates to: TYFPHTVARMTFLSHRKPNCPCS*SQPWTC
Trigger: ACAAGTCCATGGTTGACTTCATGAACACGGACAATT...TGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGTATGCGGAAAGTACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp TCTGGCTCTCTTTCATGGTTACATGGGAGTGGACTGCTTCTTCAGTCACTGCAGGGTTCAAACTATTCATaGAATGCAGCTACAGTCGCA +
Preference number: 4 (lower is better)
Translates to: SGSLSWLHGSGLLLQSLQGSNYS*NAATVA
Trigger: TGCGACTGTAGCTGCATTTCATGAATAGTTTGAACC...CTGCAGTGACTGAAGAAGCAGTCCACTCCCATGTAACCATGAAAGAGAGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR GCA 90 bp GTAGTGGTACATGTTGTTGTAACCGGCATAGTCCAGGCTGCGGGTCTTGAGGATACCTCCTCTTTAAACTaGAATACCAATTTGGCATCG +
Preference number: 4 (lower is better)
Translates to: VVVHVVVTGIVQAAGLEDTSSLN*NTNLAS
Trigger: CGATGCCAAATTGGTATTGCAGTTTAAAGAGGAGGT...ATCCTCAAGACCCGCAGCCTGGACTATGCCGGTTACAACAACATGTACCACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR GCA 90 bp TTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTAACACCGCAAGCTAGTTTTTaGATGCATGCACGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: FPQASPSYLRLHDLANLTPQASF*MHARSL
Trigger: AAGGCTCCGTGCATGCATGCAAAAACTAGCTTGCGG...TGTTAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTACTTTCCGCATACTGTTaGCCGTATGACTTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: EFPQASPSYLRLHDLANLLSAYC*PYDFPV
Trigger: GACAGGAAAGTCATACGGGCAACAGTATGCGGAAAG...TAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp GCACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTGCAATACCAATTTaGCATCGGCCTTGTACTCTT +
Preference number: 4 (lower is better)
Translates to: AQCIYGVREFKQCGHSNFTAIPI*HRPCTL
Trigger: AAGAGTACAAGGCCGATGCCAAATTGGTATTGCAGT...GAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp CACTTATTAATCCAAACTACGGCATTGCATTTACAACAATCATCGCATAAACTGTTCTTCCGACGTCTGTaGCCCGCCGGCTCGAAAGGG +
Preference number: 4 (lower is better)
Translates to: HLLIQTTALHLQQSSHKLFFRRL*PAGSKG
Trigger: CCCTTTCGAGCCGGCGGGCCACAGACGTCGGAAGAA...CAGTTTATGCGATGATTGTTGTAAATGCAATGCCGTAGTTTGGATTAATAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp TGCCTCGCCTCTTTAGTATGTTGTTTGACCAGAGAGGGACAGGGCGGGGAGGAATGTTCCTTAGATAACTaGATAGTACAAAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: CLASLVCCLTREGQGGEECSLDN*IVQSLP
Trigger: AGGCAAACTTTGTACTATCCAGTTATCTAAGGAACA...TTCCTCCCCGCCCTGTCCCTCTCTGGTCAAACAACATACTAAAGAGGCGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp TTCAAACTATTCATGAAATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTTCTCCTCCACCTGTTTaGACTTGGACTCCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: FKLFMKCSYSRMQRRILVSPPPV*TWTPVL
Trigger: AAGGACTGGAGTCCAAGTTCAAACAGGTGGAGGAGA...AACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATTTCATGAATAGTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR TCA 90 bp CACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCAAATTGTCCGTGTTCATaGAGTCAACCATGGACTTGT +
Preference number: 4 (lower is better)
Translates to: HNVSTGYASSNNVGTATSNCPCS*SQPWTC
Trigger: ACAAGTCCATGGTTGACTTCATGAACACGGACAATT...TGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp AATAATAGTAAAAATGCATGGTGCAAAAAGCTCTCTGGCTCTCTTTCATGGTTAGTGGAGCGACCACTGTaGAGATACACCTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: NNSKNAWCKKLSGSLSWLVERPL*RYTCPR
Trigger: GCGAGGGCAGGTGTATCTGCACAGTGGTCGCTCCAC...TAACCATGAAAGAGAGCCAGAGAGCTTTTTGCACCATGCATTTTTACTATTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR GCA 90 bp ATGCCATCCCTCGATGTCAGAATCCGCACTGCTGATGATTTTTCAAGATCGGTATTTATCGCCTTAAACTaGCTGGCCAGGTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: MPSLDVRIRTADDFSRSVFIALN*LARCCL
Trigger: TAAGCAACACCTGGCCAGGCAGTTTAAGGCGATAAA...TACCGATCTTGAAAAATCATCAGCAGTGCGGATTCTGACATCGAGGGATGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GCACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACCTCCTCTTTAAACTaGAATACCAATTTGGCATCG +
Preference number: 4 (lower is better)
Translates to: AQCIYGVREFKQCGHSNFTSSLN*NTNLAS
Trigger: CGATGCCAAATTGGTATTGCAGTTTAAAGAGGAGGT...GAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GTCAAACCTGATGATGATGTGGCTCTGGAACTTGTTGAAGTAGATAGAACCGTTGCGCCAATTTCCTCTTaGAGCTCGTTAAGCACTGAC +
Preference number: 4 (lower is better)
Translates to: VKPDDDVALELVEVDRTVAPISS*SSLSTD
Trigger: GTCAGTGCTTAACGAGCTGCAAGAGGAAATTGGCGC...AACGGTTCTATCTACTTCAACAAGTTCCAGAGCCACATCATCATCAGGTTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR GCA 90 bp AATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCAAGCTAGTTTTTGCATaGATGCACGGAGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: NVSTGYASSNNVGTATSLKLVFA*MHGAFL
Trigger: AAGAAAGGCTCCGTGCATGCATGCAAAAACTAGCTT...GAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GACCACGATCTAAGGAAATGTTCATGCCATCCTAACAGTGGGTTTTTCCCCGGTAAGCTAGTTTTTGCATaGATGCACGGAGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: DHDLRKCSCHPNSGFFPGKLVFA*MHGAFL
Trigger: AAGAAAGGCTCCGTGCATGCATGCAAAAACTAGCTT...ACCGGGGAAAAACCCACTGTTAGGATGGCATGAACATTTCCTTAGATCGTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp ATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCTACTGCAATACCAATTTaGCATCGGCCTTGTACTCTT +
Preference number: 4 (lower is better)
Translates to: MYLRGTRVQTMWAQQLHSTAIPI*HRPCTL
Trigger: AAGAGTACAAGGCCGATGCCAAATTGGTATTGCAGT...AGAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp GAGACGGTGGGAGGTGAAATTGTCCGTGTTCATGAAGTCAACCATGGACTTGTAGCCTTTCTTCAAGATTaGACACTCTGCTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: ETVGGEIVRVHEVNHGLVAFLQD*TLCSEV
Trigger: AACTTCAGAGCAGAGTGTCCAATCTTGAAGAAAGGC...TACAAGTCCATGGTTGACTTCATGAACACGGACAATTTCACCTCCCACCGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR CCA 90 bp CACTTATTAATCCAAACTACGGCATTGCATTTACAACAATCATCGCATAAACTGGGGTGGGGGAGACGGTaGGAGGTGAAATTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: HLLIQTTALHLQQSSHKLGWGRR*EVKLSV
Trigger: CACGGACAATTTCACCTCCCACCGTCTCCCCCACCC...CAGTTTATGCGATGATTGTTGTAAATGCAATGCCGTAGTTTGGATTAATAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp GAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTACGATGTATTCATAGGTaGAGGCATTGGTCTGGTATG +
Preference number: 4 (lower is better)
Translates to: EFPQASPSYLRLHDLANLRCIHR*RHWSGM
Trigger: CATACCAGACCAATGCCTCCACCTATGAATACATCG...TAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp ATGCCATCCCTCGATGTCAGAATCCGCACTGCTGATGATTTTTCAAGATCGGTACGATGTATTCATAGGTaGAGGCATTGGTCTGGTATG +
Preference number: 4 (lower is better)
Translates to: MPSLDVRIRTADDFSRSVRCIHR*RHWSGM
Trigger: CATACCAGACCAATGCCTCCACCTATGAATACATCG...TACCGATCTTGAAAAATCATCAGCAGTGCGGATTCTGACATCGAGGGATGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp CACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCATCCAGCATGGAGATGTaGGAGTATTTGTTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: HNVSTGYASSNNVGTATSSSMEM*EYLFWN
Trigger: ATTCCAGAACAAATACTCCCACATCTCCATGCTGGA...TGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp TGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCTATCCAGCATGGAGATGTaGGAGTATTTGTTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: CIYGVREFKQCGHSNFTLSSMEM*EYLFWN
Trigger: ATTCCAGAACAAATACTCCCACATCTCCATGCTGGA...TAGAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp GTCGCATGCAAAGGAGGATCCTGGTTGTATTCAAGGTTCCTTAGTGAAATGGTGATGGTTACATGGGAGTaGACTGCTTCTTCAGTCACT +
Preference number: 4 (lower is better)
Translates to: VACKGGSWLYSRFLSEMVMVTWE*TASSVT
Trigger: AGTGACTGAAGAAGCAGTCCACTCCCATGTAACCAT...CACCATTTCACTAAGGAACCTTGAATACAACCAGGATCCTCCTTTGCATGCGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
3UTR CAA 72 bp ACGAAGTTACCACCTCAAGGGAATAACAGAAGAACGTaGCACAATGTATCTACGGGGTACGCGAGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: TKLPPQGNNRRT*HNVSTGYASSN
Trigger: GTTTGAACTCGCGTACCCCGTAGATACATTGTGCAACGTTCTTCTGTTATTCCCTTGAGGTGGTAACTTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp GAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTAAATTGTCCGTGTTCATaGAGTCAACCATGGACTTGT +
Preference number: 4 (lower is better)
Translates to: EFPQASPSYLRLHDLANLNCPCS*SQPWTC
Trigger: ACAAGTCCATGGTTGACTTCATGAACACGGACAATT...TAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp AATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCAATCATCGCATAAACTaGACATACGAAGTTACCACC +
Preference number: 4 (lower is better)
Translates to: NVSTGYASSNNVGTATSLNHRIN*TYEVTT
Trigger: GGTGGTAACTTCGTATGTTCAGTTTATGCGATGATT...GAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp AATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCATAACAGAAGAACGTTaGACAATGTATCTACGGGGT +
Preference number: 4 (lower is better)
Translates to: NVSTGYASSNNVGTATSLITEER*TMYLRG
Trigger: ACCCCGTAGATACATTGTGCAACGTTCTTCTGTTAT...GAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GGAAAGGTCTTTATTGTCAGTTTAGAATGCAACATCTTAAGGTTACATGCTTTGGCGAAGCCTCCGCTCTaGATATTTATCGCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GKVFIVSLECNILRLHALAKPPL*IFIASR
Trigger: CCGGGACGCGATAAATATGCAGAGCGGAGGCTTCGC...CAAAGCATGTAACCTTAAGATGTTGCATTCTAAACTGACAATAAAGACCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277415.15
CDS-3UTR CCA 90 bp ATGCCATCCCTCGATGTCAGAATCCGCACTGCTGATGATTTTTCAAGATCGGTAGCCTTTCTTCAAGATTaGACACTCTGCTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: MPSLDVRIRTADDFSRSVAFLQD*TLCSEV
Trigger: AACTTCAGAGCAGAGTGTCCAATCTTGAAGAAAGGC...TACCGATCTTGAAAAATCATCAGCAGTGCGGATTCTGACATCGAGGGATGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp CACTTATTAATCCAAACTACGGCATTGCATTTACAACAATCATCGCATAAACTGATGTTGCCAGCGTTCTaGTTGGTGGCGTACACGGCC +
Preference number: 4 (lower is better)
Translates to: HLLIQTTALHLQQSSHKLMLPAF*LVAYTA
Trigger: GGCCGTGTACGCCACCAACCAGAACGCTGGCAACAT...CAGTTTATGCGATGATTGTTGTAAATGCAATGCCGTAGTTTGGATTAATAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp ACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTGGGAGTATTTGTTCTaGAATGGGATGTCGATGTAT +
Preference number: 4 (lower is better)
Translates to: TMYLRGTRVQTMWAQQLHWEYLF*NGMSMY
Trigger: ATACATCGACATCCCATTCCAGAACAAATACTCCCA...GTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp AGTTACCACCTCAAGGGAATAACAGAAGAACGTTGCACAATGTATCTACGGGGTCGAGTTCAAACAATGTaGGCACAGCAACTTCACTCT +
Preference number: 4 (lower is better)
Translates to: SYHLKGITEERCTMYLRGRVQTM*AQQLHS
Trigger: AGAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCG...ACCCCGTAGATACATTGTGCAACGTTCTTCTGTTATTCCCTTGAGGTGGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp AAGAGCCTGGACGCCACATTCCTCGGAGCTGACCACGATCTAAGGAAATGTTCATGTTCCTTAGATAACTaGATAGTACAAAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: KSLDATFLGADHDLRKCSCSLDN*IVQSLP
Trigger: AGGCAAACTTTGTACTATCCAGTTATCTAAGGAACA...TGAACATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGTGGCGTCCAGGCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp CATGAAATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTGTATTCAAGGTTCTTTCATGGTTACATaGGAGTGGACTGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: HEMQLQSHAKEDPGCIQGSFMVT*EWTASS
Trigger: TGAAGAAGCAGTCCACTCCCATGTAACCATGAAAGA...ACCTTGAATACAACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CCA 90 bp CTCTTTCATGGTTACATGGGAGTGGACTGCTTCTTCAGTCACTGCAGCATTGAATGCAAAGGAGGATCCTaGTTGTATTCAAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: LFHGYMGVDCFFSHCSIECKGGS*LYSRFL
Trigger: AAGGAACCTTGAATACAACCAGGATCCTCCTTTGCA...TTCAATGCTGCAGTGACTGAAGAAGCAGTCCACTCCCATGTAACCATGAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
3UTR CAA 72 bp AATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTaGTATTCAAGGTTCCTTAGTGAAATGGTGCTAAGT +
Preference number: 4 (lower is better)
Translates to: NAATVACKGGSW*YSRFLSEMVLS
Trigger: ACTTAGCACCATTTCACTAAGGAACCTTGAATACAACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR TCA 90 bp GGAAAGGTCTTTATTGTCAGTTTAGAATGCAACATCTTAAGGTTACATGCTTTGTTGGTGGGCAGCACTTaGGTGAGTTCAGTGCCCATC +
Preference number: 4 (lower is better)
Translates to: GKVFIVSLECNILRLHALLVGST*VSSVPI
Trigger: GATGGGCACTGAACTCACTCAAGTGCTGCCCACCAA...CAAAGCATGTAACCTTAAGATGTTGCATTCTAAACTGACAATAAAGACCTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277415.15
CDS-3UTR GCA 90 bp GATGATTTTTCAAGATCGGTATTGTTAGTGTTATTGGTATCTTTTTGGCAGCAGGCCTCAGCTGTTTTGTaGGGGCATCCCGTGAACACA +
Preference number: 4 (lower is better)
Translates to: DDFSRSVLLVLLVSFWQQASAVL*GHPVNT
Trigger: TGTGTTCACGGGATGCCCGCACAAAACAGCTGAGGC...CTGCTGCCAAAAAGATACCAATAACACTAACAATACCGATCTTGAAAAATCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp AGTTACCACCTCAAGGGAATAACAGAAGAACGTTGCACAATGTATCTACGGGGTCAAGATTGGACACTCTaGTCTGAAGTTCATCGTAGT +
Preference number: 4 (lower is better)
Translates to: SYHLKGITEERCTMYLRGQDWTL*SEVHRS
Trigger: ACTACGATGAACTTCAGAGCAGAGTGTCCAATCTTG...ACCCCGTAGATACATTGTGCAACGTTCTTCTGTTATTCCCTTGAGGTGGTAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp ATGCCATCCCTCGATGTCAGAATCCGCACTGCTGATGATTTTTCAAGATCGGTACTAAGGAAATGTTCATaGCATCCTAACAGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: MPSLDVRIRTADDFSRSVLRKCS*HPNSGF
Trigger: AAACCCACTGTTAGGATGGCATGAACATTTCCTTAG...TACCGATCTTGAAAAATCATCAGCAGTGCGGATTCTGACATCGAGGGATGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp CTCTTTCATGGTTACATGGGAGTGGACTGCTTCTTCAGTCACTGCAGCATTGAAAGTAAAAATGCATGGTaGAAAAAGCTCTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LFHGYMGVDCFFSHCSIESKNAW*KKLSGS
Trigger: AGAGCCAGAGAGCTTTTTGCACCATGCATTTTTACT...TTCAATGCTGCAGTGACTGAAGAAGCAGTCCACTCCCATGTAACCATGAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CCA 90 bp AGTTACCACCTCAAGGGAATAACAGAAGAACGTTGCACAATGTATCTACGGGGTGCCTTTCTTCAAGATTaGACACTCTGCTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: SYHLKGITEERCTMYLRGAFLQD*TLCSEV
Trigger: AACTTCAGAGCAGAGTGTCCAATCTTGAAGAAAGGC...ACCCCGTAGATACATTGTGCAACGTTCTTCTGTTATTCCCTTGAGGTGGTAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp TATGTACTAGACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTAATCTATTATTGGTATCTTTTTaGCAGCAGTTTCACAGGAGT +
Preference number: 4 (lower is better)
Translates to: YVLDTGPGAMWSLSTVNLLLVSF*QQFHRS
Trigger: ACTCCTGTGAAACTGCTGCCAAAAAGATACCAATAA...TAGATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTCTAGTACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR TCA 90 bp GATGATTTTTCAAGATCGGTATTGTTAGTGTTATTGGTATCTTTTTGGCAGCAGTGGGTTTTTCCCCGGTaGGAACTGGCCAACAGTCAT +
Preference number: 4 (lower is better)
Translates to: DDFSRSVLLVLLVSFWQQWVFPR*ELANSH
Trigger: ATGACTGTTGGCCAGTTCTCACCGGGGAAAAACCCA...CTGCTGCCAAAAAGATACCAATAACACTAACAATACCGATCTTGAAAAATCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp TTTGGGAAAGGTCTTTATTGTCAGTTTAGAATGCAACATCTTAAGGTTACATGCACCTTCTCCAGTAGCTaGCTCAGCTGTTTTGTGCGG +
Preference number: 4 (lower is better)
Translates to: FGKGLYCQFRMQHLKVTCTFSSS*LSCFVR
Trigger: CCGCACAAAACAGCTGAGGCAGCTACTGGAGAAGGT...GCATGTAACCTTAAGATGTTGCATTCTAAACTGACAATAAAGACCTTTCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277415.15
CDS-3UTR GCA 90 bp GTCGCATGCAAAGGAGGATCCTGGTTGTATTCAAGGTTCCTTAGTGAAATGGTGAAACTATTCATGAAATaGAGCTACAGTCGCATGCAA +
Preference number: 4 (lower is better)
Translates to: VACKGGSWLYSRFLSEMVKLFMK*SYSRMQ
Trigger: TTGCATGCGACTGTAGCTGCATTTCATGAATAGTTT...CACCATTTCACTAAGGAACCTTGAATACAACCAGGATCCTCCTTTGCATGCGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CCA 90 bp ACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACGTATTTGTTCTGGAATaGGATGTCGATGTATTCATA +
Preference number: 4 (lower is better)
Translates to: TMYLRGTRVQTMWAQQLHVFVLE*DVDVFI
Trigger: TATGAATACATCGACATCCCATTCCAGAACAAATAC...GTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp TTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTAACATGGGAGTATTTGTTCTaGAATGGGATGTCGATGTAT +
Preference number: 4 (lower is better)
Translates to: FPQASPSYLRLHDLANLTWEYLF*NGMSMY
Trigger: ATACATCGACATCCCATTCCAGAACAAATACTCCCA...TGTTAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
3UTR CAA 72 bp TTCAAGATCGGTATTGTTAGTGTTATTGGTATCTTTTaGGCAGCAGTTTCACAGGAGTCCCTTTGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: FKIGIVSVIGIF*AAVSQESLCGE
Trigger: CTCACCACAAAGGGACTCCTGTGAAACTGCTGCCAAAAAGATACCAATAACACTAACAATACCGATCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp GATGATTTTTCAAGATCGGTATTGTTAGTGTTATTGGTATCTTTTTGGCAGCAGGGCATTGGTCTGGTATaGATAGTGGACCTTGGTACC +
Preference number: 4 (lower is better)
Translates to: DDFSRSVLLVLLVSFWQQGIGLV*IVDLGT
Trigger: GGTACCAAGGTCCACTATGCATACCAGACCAATGCC...CTGCTGCCAAAAAGATACCAATAACACTAACAATACCGATCTTGAAAAATCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp GAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTATGTTCCTTAGATAACTaGATAGTACAAAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: EFPQASPSYLRLHDLANLCSLDN*IVQSLP
Trigger: AGGCAAACTTTGTACTATCCAGTTATCTAAGGAACA...TAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp GGATCCTGGTTGTATTCAAGGTTCCTTAGTGAAATGGTGCTAAGTATTGGAAAAATGGTTACATGGGAGTaGACTGCTTCTTCAGTCACT +
Preference number: 4 (lower is better)
Translates to: GSWLYSRFLSEMVLSIGKMVTWE*TASSVT
Trigger: AGTGACTGAAGAAGCAGTCCACTCCCATGTAACCAT...TTTTCCAATACTTAGCACCATTTCACTAAGGAACCTTGAATACAACCAGGATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CCA 90 bp AATAATAGTAAAAATGCATGGTGCAAAAAGCTCTCTGGCTCTCTTTCATGGTTATCTGGCTCTCTTTCATaGTTACATGGGAGTGGACTG +
Preference number: 4 (lower is better)
Translates to: NNSKNAWCKKLSGSLSWLSGSLS*LHGSGL
Trigger: CAGTCCACTCCCATGTAACCATGAAAGAGAGCCAGA...TAACCATGAAAGAGAGCCAGAGAGCTTTTTGCACCATGCATTTTTACTATTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR GCA 90 bp GGATCCTGGTTGTATTCAAGGTTCCTTAGTGAAATGGTGCTAAGTATTGGAAAAAGTAAAAATGCATGGTaGAAAAAGCTCTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: GSWLYSRFLSEMVLSIGKSKNAW*KKLSGS
Trigger: AGAGCCAGAGAGCTTTTTGCACCATGCATTTTTACT...TTTTCCAATACTTAGCACCATTTCACTAAGGAACCTTGAATACAACCAGGATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CCA 90 bp GATGATTTTTCAAGATCGGTATTGTTAGTGTTATTGGTATCTTTTTGGCAGCAGCGAGTTCAAACAATGTaGGCACAGCAACTTCACTCT +
Preference number: 4 (lower is better)
Translates to: DDFSRSVLLVLLVSFWQQRVQTM*AQQLHS
Trigger: AGAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCG...CTGCTGCCAAAAAGATACCAATAACACTAACAATACCGATCTTGAAAAATCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CCA 90 bp CAGTTTAGAATGCAACATCTTAAGGTTACATGCTTTGAGTCACATACACGAAGTTCTTTCATGGTTACATaGGAGTGGACTGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: QFRMQHLKVTCFESHTRSSFMVT*EWTASS
Trigger: TGAAGAAGCAGTCCACTCCCATGTAACCATGAAAGA...ACTTCGTGTATGTGACTCAAAGCATGTAACCTTAAGATGTTGCATTCTAAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277415.15
CDS-3UTR CCA 90 bp ATAATAGTAAAAATGCATGGTGCAAAAAGCTCTCTGGCTCTCTTTCATGGTTACTGCAAAGGAGGATCCTaGTTGTATTCAAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: IIVKMHGAKSSLALFHGYCKGGS*LYSRFL
Trigger: AAGGAACCTTGAATACAACCAGGATCCTCCTTTGCA...GTAACCATGAAAGAGAGCCAGAGAGCTTTTTGCACCATGCATTTTTACTATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR GCA 90 bp GGATCCTGGTTGTATTCAAGGTTCCTTAGTGAAATGGTGCTAAGTATTGGAAAAAAACTATTCATGAAATaGAGCTACAGTCGCATGCAA +
Preference number: 4 (lower is better)
Translates to: GSWLYSRFLSEMVLSIGKKLFMK*SYSRMQ
Trigger: TTGCATGCGACTGTAGCTGCATTTCATGAATAGTTT...TTTTCCAATACTTAGCACCATTTCACTAAGGAACCTTGAATACAACCAGGATCC
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
3UTR CAA 72 bp AGAATCCGCACTGCTGATGATTTTTCAAGATCGGTATaGTTAGTGTTATTGGTATCTTTTTGGCAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: RIRTADDFSRSV*LVLLVSFWQQF
Trigger: AAACTGCTGCCAAAAAGATACCAATAACACTAACAATACCGATCTTGAAAAATCATCAGCAGTGCGGATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR GCA 90 bp AATAATAGTAAAAATGCATGGTGCAAAAAGCTCTCTGGCTCTCTTTCATGGTTACATCTTAAGGTTACATaGTTTGAGTCACATACACGA +
Preference number: 4 (lower is better)
Translates to: NNSKNAWCKKLSGSLSWLHLKVT*FESHTR
Trigger: TCGTGTATGTGACTCAAAGCATGTAACCTTAAGATG...TAACCATGAAAGAGAGCCAGAGAGCTTTTTGCACCATGCATTTTTACTATTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000277415.15
CDS CCA 90 bp GCTCCGCTGGCTCCGGCGGCGGCGCCTGGCTCGTGTCCCCACGCCTaGATTCAGCACCCGGAGCGGGCGGCGCGCGGGCTCTGCTGCGCG +
Preference number: 5 (lower is better)
Translates to: APLAPAAAPGSCPHA*IQHPERAARGLCCA
Trigger: CGCGCAGCAGAGCCCGCGCGCCGCCCGCTCCGGGTGCTGAATCCAGGCGTGGGGACACGAGCCAGGCGCCGCCGCCGGAGCCAGCGGAGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000277415.15
ENST00000371799.8
CDS CCA 90 bp GCACCGACATCGCGCCTCGAGCTGCCTCCAGCGCCCGCTCCGAGCTaGCACCGGCTCCCGCGCCCAGGCGGCCTTCAGGCGGCGGGCACC +
Preference number: 5 (lower is better)
Translates to: APTSRLELPPAPAPS*HRLPRPGGLQAAGT
Trigger: GGTGCCCGCCGCCTGAAGGCCGCCTGGGCGCGGGAGCCGGTGCCAGCTCGGAGCGGGCGCTGGAGGCAGCTCGAGGCGCGATGTCGGTGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371793.8
ENST00000392991.8
CDS GCA 90 bp TCCGGGCCGGGTGCATGTCTCGCTGCCACCTCCAACGACCTGGCATaGAGGGCCCTGGGTGCTGGCCGGCCGGCGGCTGCGTGGACGCGG +
Preference number: 5 (lower is better)
Translates to: SGPGACLAATSNDLA*RALGAGRPAAAWTR
Trigger: CCGCGTCCACGCAGCCGCCGGCCGGCCAGCACCCAGGGCCCTGCATGCCAGGTCGTTGGAGGTGGCAGCGAGACATGCACCCGGCCCGGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000277415.15
ENST00000371799.8
CDS CCA 90 bp TCTCGCTGCCACCTCCAACGACCTGGCATGCAGGGCCCTGGGTGCTaGCCGGCCGGCGGCTGCGTGGACGCGGACGCGCTCCGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: SRCHLQRPGMQGPGC*PAGGCVDADALRLW
Trigger: CCAGAGCCGGAGCGCGTCCGCGTCCACGCAGCCGCCGGCCGGCCAGCACCCAGGGCCCTGCATGCCAGGTCGTTGGAGGTGGCAGCGAGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000277415.15
ENST00000371799.8
CDS GCA 90 bp ATGTCTCGCTGCCACCTCCAACGACCTGGCATGCAGGGCCCTGGGTaGTGGCCGGCCGGCGGCTGCGTGGACGCGGACGCGCTCCGGCTC +
Preference number: 5 (lower is better)
Translates to: MSRCHLQRPGMQGPG*WPAGGCVDADALRL
Trigger: GAGCCGGAGCGCGTCCGCGTCCACGCAGCCGCCGGCCGGCCAGCACCCAGGGCCCTGCATGCCAGGTCGTTGGAGGTGGCAGCGAGACAT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000277415.15
ENST00000371799.8
CDS GCA 90 bp CCGGAGCGGGCGGCGCGCGGGCTCTGCTGCGCGAAGCCTCCGCTCTaGATATTTATCGCGTCCCGGTTCCGGCGCGTCTGCCTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: PERAARGLCCAKPPL*IFIASRFRRVCLRA
Trigger: TGCCCGGAGGCAGACGCGCCGGAACCGGGACGCGATAAATATGCAGAGCGGAGGCTTCGCGCAGCAGAGCCCGCGCGCCGCCCGCTCCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000371799.8
CDS CCA 90 bp GAGCTTCCGGGCCGGGTGCATGTCTCGCTGCCACCTCCAACGACCTaGCATGCAGGGCCCTGGGTGCTGGCCGGCCGGCGGCTGCGTGGA +
Preference number: 5 (lower is better)
Translates to: ELPGRVHVSLPPPTT*HAGPWVLAGRRLRG
Trigger: TCCACGCAGCCGCCGGCCGGCCAGCACCCAGGGCCCTGCATGCCAGGTCGTTGGAGGTGGCAGCGAGACATGCACCCGGCCCGGAAGCTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252854.8
ENST00000277415.15
ENST00000371799.8
ENST00000371801.4
CDS GCA 90 bp GGGAGGGCGGGGGCCCCGGCCCGCGGTGATGACCCTGACCTCGACTaGCCAGAGCACACGTGCCATGTGGCGGCTTCTCCTCTTGCCCTC +
Preference number: 5 (lower is better)
Translates to: GRAGAPARGDDPDLD*PEHTCHVAASPLAL
Trigger: GAGGGCAAGAGGAGAAGCCGCCACATGGCACGTGTGCTCTGGGCAGTCGAGGTCAGGGTCATCACCGCGGGCCGGGGCCCCCGCCCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS GCA 90 bp CACGCCTGGATTCAGCACCCGGAGCGGGCGGCGCGCGGGCTCTGCTaGGCGAAGCCTCCGCTCTGCATATTTATCGCGTCCCGGTTCCGG +
Preference number: 5 (lower is better)
Translates to: HAWIQHPERAARGLC*AKPPLCIFIASRFR
Trigger: CCGGAACCGGGACGCGATAAATATGCAGAGCGGAGGCTTCGCGCAGCAGAGCCCGCGCGCCGCCCGCTCCGGGTGCTGAATCCAGGCGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000371799.8
CDS GCA 90 bp AGGAAGAGGAGGCTGAGGAGCTTCCGGGCCGGGTGCATGTCTCGCTaGCACCTCCAACGACCTGGCATGCAGGGCCCTGGGTGCTGGCCG +
Preference number: 5 (lower is better)
Translates to: RKRRLRSFRAGCMSR*HLQRPGMQGPGCWP
Trigger: CGGCCAGCACCCAGGGCCCTGCATGCCAGGTCGTTGGAGGTGGCAGCGAGACATGCACCCGGCCCGGAAGCTCCTCAGCCTCCTCTTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252854.8
ENST00000277415.15
ENST00000371799.8
ENST00000371801.4
CDS CCA 90 bp CTCACGCCGGGGCATCCCTCTCCGATCCCCGCAGAGGGTCCGCTTTaGGGCAAAGGTTGCCGGCAGAGAGACGGCGCCGTCCTGCCTACT +
Preference number: 5 (lower is better)
Translates to: LTPGHPSPIPAEGPL*GKGCRQRDGAVLPT
Trigger: AGTAGGCAGGACGGCGCCGTCTCTCTGCCGGCAACCTTTGCCCCAAAGCGGACCCTCTGCGGGGATCGGAGAGGGATGCCCCGGCGTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371796.7
CDS TCA 90 bp AGCTGCCTTCCCGCAGGAAGAGCCTGCGCGCTTCTCCCACAGGCGTaGGCCGGTTGCTTCTGCCAGTGGGAGGAGCCCAAGCTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: SCLPAGRACALLPQA*AGCFCQWEEPKLER
Trigger: GCGCTCCAGCTTGGGCTCCTCCCACTGGCAGAAGCAACCGGCTCACGCCTGTGGGAGAAGCGCGCAGGCTCTTCCTGCGGGAAGGCAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS GCA 90 bp ACAGCCCAGCCCGCGTGGGGCACAGTCAGGCCCAGTGTGAGACACTaGATCCAGGCAGGCCCTGTCCCACGATGGAGCAGCAGCACCACC +
Preference number: 5 (lower is better)
Translates to: TAQPAWGTVRPSVRH*IQAGPVPRWSSSTT
Trigger: GGTGGTGCTGCTGCTCCATCGTGGGACAGGGCCTGCCTGGATGCAGTGTCTCACACTGGGCCTGACTGTGCCCCACGCGGGCTGGGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS GCA 90 bp CCGGCCCGCGGTGATGACCCTGACCTCGACTGCCCAGAGCACACGTaGCATGTGGCGGCTTCTCCTCTTGCCCTCGGGGTCTGGGGTACT +
Preference number: 5 (lower is better)
Translates to: PARGDDPDLDCPEHT*HVAASPLALGVWGT
Trigger: AGTACCCCAGACCCCGAGGGCAAGAGGAGAAGCCGCCACATGGCACGTGTGCTCTGGGCAGTCGAGGTCAGGGTCATCACCGCGGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS GCA 90 bp GCCCGGAGGCCGGTGTGTCTGCGCAGCCACGCAGCTCTTCCAGAATaGACGAGCCTCGGCCGCCCTCTGAAGGGCCAAACGCTCCTGATT +
Preference number: 5 (lower is better)
Translates to: ARRPVCLRSHAALPE*TSLGRPLKGQTLLI
Trigger: AATCAGGAGCGTTTGGCCCTTCAGAGGGCGGCCGAGGCTCGTGCATTCTGGAAGAGCTGCGTGGCTGCGCAGACACACCGGCCTCCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS GCA 90 bp CACTGCACAGGAACAGAACTCCTCCTGCCCGGAGGCCGGTGTGTCTaGGCAGCCACGCAGCTCTTCCAGAATGCACGAGCCTCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: HCTGTELLLPGGRCV*AATQLFQNARASAA
Trigger: GGCGGCCGAGGCTCGTGCATTCTGGAAGAGCTGCGTGGCTGCGCAGACACACCGGCCTCCGGGCAGGAGGAGTTCTGTTCCTGTGCAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS GCA 90 bp CTCAGGGCGGCTTCCACACCCACTGCACAGGAACAGAACTCCTCCTaGCCGGAGGCCGGTGTGTCTGCGCAGCCACGCAGCTCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: LRAASTPTAQEQNSS*PEAGVSAQPRSSSR
Trigger: TCTGGAAGAGCTGCGTGGCTGCGCAGACACACCGGCCTCCGGGCAGGAGGAGTTCTGTTCCTGTGCAGTGGGTGTGGAAGCCGCCCTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS-3UTR CAA 90 bp GGGGTAGCTCGTGTTCCAGGTCTGCAGGGTCTGCAGGGACACGGGGTCCAGCCTTTGCCAGCGTTCTGGTaGGTGGCGTACACGGCCCAC +
Preference number: 5 (lower is better)
Translates to: GVARVPGLQGLQGHGVQPLPAFW*VAYTAH
Trigger: GTGGGCCGTGTACGCCACCAACCAGAACGCTGGCAA...AGGCTGGACCCCGTGTCCCTGCAGACCCTGCAGACCTGGAACACGAGCTACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR CAA 90 bp CGATCCCCACACCAGCACGCCACAGGGCTCCTCACTCACCTCCTGCCGGGCATGGGGGGCAGCGGAGTCTaGAGTGAGTTCAGTGCCCAT +
Preference number: 5 (lower is better)
Translates to: RSPHQHATGLLTHLLPGMGGSGV*SEFSAH
Trigger: ATGGGCACTGAACTCACTCAAGACTCCGCTGCCCCC...CATGCCCGGCAGGAGGTGAGTGAGGAGCCCTGTGGCGTGCTGGTGTGGGGATCG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS-3UTR CAA 90 bp CCCCACACCAGCACGCCACAGGGCTCCTCACTCACCTCCTGCCGGGCATGTGGCCCCTCGTGCTGCCCTTaGAACTTCTCAGCAGGGAGT +
Preference number: 5 (lower is better)
Translates to: PHTSTPQGSSLTSCRACGPSCCP*NFSAGS
Trigger: ACTCCCTGCTGAGAAGTTCAAAGGGCAGCACGAGGG...GCCACATGCCCGGCAGGAGGTGAGTGAGGAGCCCTGTGGCGTGCTGGTGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS GCA 90 bp CCTCGACTGCCCAGAGCACACGTGCCATGTGGCGGCTTCTCCTCTTaGCCTCGGGGTCTGGGGTACTGTGGAAAGCTGCTCACGCCCTTG +
Preference number: 5 (lower is better)
Translates to: PRLPRAHVPCGGFSS*PRGLGYCGKLLTPL
Trigger: CAAGGGCGTGAGCAGCTTTCCACAGTACCCCAGACCCCGAGGGCAAGAGGAGAAGCCGCCACATGGCACGTGTGCTCTGGGCAGTCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS-3UTR CAA 90 bp TGGCAGCAGTTTCACAGGAGTCCCTTTGTGGTGAGGACGTGGGCCCTTGGCTTCCCGGCCGCCGAGAGCTaGGTGGTGTTGAGGCCCACC +
Preference number: 5 (lower is better)
Translates to: WQQFHRSPFVVRTWALGFPAAES*VVLRPT
Trigger: GGTGGGCCTCAACACCACCAAGCTCTCGGCGGCCGG...GAAGCCAAGGGCCCACGTCCTCACCACAAAGGGACTCCTGTGAAACTGCTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371793.8
CDS CCA 90 bp GCTGCCCTTCCAGGTCTCAGCGGCACAATCCCCACCGCCTGTTTCTaGAGCCCCCAAGGGCAGCGTTATGCCCAAAGGGAGGATGAGCCA +
Preference number: 5 (lower is better)
Translates to: AALPGLSGTIPTACF*SPQGQRYAQREDEP
Trigger: TGGCTCATCCTCCCTTTGGGCATAACGCTGCCCTTGGGGGCTCCAGAAACAGGCGGTGGGGATTGTGCCGCTGAGACCTGGAAGGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS-3UTR CAA 90 bp CTTGGGTGCGGCCATGTCCAGGACCACCCAGAATCAGCCATCTCTTTGCCAAGGAGGCTTGGAGGGCCCTaGGGTGCGGCCATGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LGCGHVQDHPESAISLPRRLGGP*GAAMSR
Trigger: CCTGGACATGGCCGCACCCAAGGGCCCTCCAAGCCT...CCTTGGCAAAGAGATGGCTGATTCTGGGTGGTCCTGGACATGGCCGCACCCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CAA 90 bp CCACACCAGCACGCCACAGGGCTCCTCACTCACCTCCTGCCGGGCATGTGGCCAGTACGACAAGCCCGTTaGAAATGCCCACGATCCCCA +
Preference number: 5 (lower is better)
Translates to: PHQHATGLLTHLLPGMWPVRQAR*KCPRSP
Trigger: TGGGGATCGTGGGCATTTCAAACGGGCTTGTCGTAC...TGGCCACATGCCCGGCAGGAGGTGAGTGAGGAGCCCTGTGGCGTGCTGGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS TCA 90 bp GATGTGATCTCAGCAGCCCTCCCGTCTCACAGAGGACCATGGAGGTaGGGAGGGACACACCCGGGCCACCCGGTGATTTGGACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: DVISAALPSHRGPWR*GGTHPGHPVIWTEA
Trigger: AGCCTCAGTCCAAATCACCGGGTGGCCCGGGTGTGTCCCTCCTCACCTCCATGGTCCTCTGTGAGACGGGAGGGCTGCTGAGATCACATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS GCA 90 bp GGTAAGCGGGACGACATAACCCCACTGCTGGATTGGGATTTGGACTaGACATCCTGGGCAGAGCCAGGGAGCCAGCGTGGGCTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: GKRDDITPLLDWDLD*TSWAEPGSQRGLPG
Trigger: GCCTGGAAGCCCACGCTGGCTCCCTGGCTCTGCCCAGGATGTGCAGTCCAAATCCCAATCCAGCAGTGGGGTTATGTCGTCCCGCTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CAA 90 bp CCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTCGCAGAGGGTCCGCTTaGGGGCAAAGGTTGCCGGCA +
Preference number: 5 (lower is better)
Translates to: PVPSETRVSPGEPFLSAVRRGSA*GQRLPA
Trigger: TGCCGGCAACCTTTGCCCCAAAGCGGACCCTCTGCG...AACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTCTGGTTTCCGATGGGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371796.7
CDS-3UTR CAA 90 bp TGCCTCGCCTCTTTAGTATGTTGTTTGACCAGAGAGGGACAGGGCGGGGAGGAACAGCTCTCCTCAGGGTaGGTGGGCAGCACCCGGCGG +
Preference number: 5 (lower is better)
Translates to: CLASLVCCLTREGQGGEEQLSSG*VGSTRR
Trigger: CCGCCGGGTGCTGCCCACCAACCCTGAGGAGAGCTG...TTCCTCCCCGCCCTGTCCCTCTCTGGTCAAACAACATACTAAAGAGGCGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371796.7
CDS-3UTR CAA 90 bp CCTGGGCATGGAGGCTTCAGGGTGCCATTAAGGCTTGGAGGGCCCTTGGGTGCGCACAGGCATAGCCCTTaGTGGGGCAGCTTGCCACTA +
Preference number: 5 (lower is better)
Translates to: PGHGGFRVPLRLGGPLGAHRHSP*WGSLPL
Trigger: TAGTGGCAAGCTGCCCCACAAAGGGCTATGCCTGTG...CGCACCCAAGGGCCCTCCAAGCCTTAATGGCACCCTGAAGCCTCCATGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CAA 90 bp CCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTGAGAGCTTGGTGGTGTaGAGGCCCACCAGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: PVPSETRVSPGEPFLSAVESLVV*RPTSEG
Trigger: GCCCTCGCTGGTGGGCCTCAACACCACCAAGCTCTC...AACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTCTGGTTTCCGATGGGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371793.8
CDS GCA 90 bp CTGCATATTAAGCCAGCAATGCACACAGCTGGCCGGCACGCTGGCTaGCCTTCCAGGTCTCAGCGGCACAATCCCCACCGCCTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: LHIKPAMHTAGRHAG*PSRSQRHNPHRLFL
Trigger: CAGAAACAGGCGGTGGGGATTGTGCCGCTGAGACCTGGAAGGGCAGCCAGCGTGCCGGCCAGCTGTGTGCATTGCTGGCTTAATATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS CCA 90 bp AAGGGCCAAACGCTCCTGATTCTAACAGGGACCCTGGATGGGAAGTaGGTGGCTTTCCTGGGGAGGGTAGAGGAAGGGCCCCTCCACCAC +
Preference number: 5 (lower is better)
Translates to: KGQTLLILTGTLDGK*VAFLGRVEEGPLHH
Trigger: GTGGTGGAGGGGCCCTTCCTCTACCCTCCCCAGGAAAGCCACCCACTTCCCATCCAGGGTCCCTGTTAGAATCAGGAGCGTTTGGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS CCA 90 bp CCCTCTGAAGGGCCAAACGCTCCTGATTCTAACAGGGACCCTGGATaGGAAGTGGGTGGCTTTCCTGGGGAGGGTAGAGGAAGGGCCCCT +
Preference number: 5 (lower is better)
Translates to: PSEGPNAPDSNRDPG*EVGGFPGEGRGRAP
Trigger: AGGGGCCCTTCCTCTACCCTCCCCAGGAAAGCCACCCACTTCCCATCCAGGGTCCCTGTTAGAATCAGGAGCGTTTGGCCCTTCAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS-3UTR CAA 90 bp CACAGGAGTCCCTTTGTGGTGAGGACGTGGGCCCTTGGCTTCCAGGAGGAGGGACTGCCTGGCCAGGTGTaGCTTATGACTCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: HRSPFVVRTWALGFQEEGLPGQV*LMTLLH
Trigger: GTGGAGGAGAGTCATAAGCAACACCTGGCCAGGCAG...TCCCTCCTCCTGGAAGCCAAGGGCCCACGTCCTCACCACAAAGGGACTCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp CCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTCTCGAGCCGGAGGTCTaGACAGTCACGGGGTCACTG +
Preference number: 5 (lower is better)
Translates to: PVPSETRVSPGEPFLSAVLEPEV*TVTGSL
Trigger: CAGTGACCCCGTGACTGTCAAGACCTCCGGCTCGAG...AACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTCTGGTTTCCGATGGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp GGAAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTTTGCCAGCGTTCTGGTaGGTGGCGTACACGGCCCAC +
Preference number: 5 (lower is better)
Translates to: GKPGRRGLQFQLQIREFLLPAFW*VAYTAH
Trigger: GTGGGCCGTGTACGCCACCAACCAGAACGCTGGCAA...AAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS GCA 90 bp AGCTGCCTCAGCTGTTTTGTGCGGGCATCCCGTGAACACATGGTCTaGTGTGGAGCGACCACTGTGCAGATACACCTGCCCTCGCTGTCC +
Preference number: 5 (lower is better)
Translates to: SCLSCFVRASREHMV*CGATTVQIHLPSLS
Trigger: GGACAGCGAGGGCAGGTGTATCTGCACAGTGGTCGCTCCACAGCAGACCATGTGTTCACGGGATGCCCGCACAAAACAGCTGAGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252854.8
ENST00000277415.15
ENST00000339720.10
ENST00000371793.8
ENST00000371796.7
ENST00000392991.8
ENST00000539529.5
CDS CCA 90 bp CCAGTAGCTGCCTCAGCTGTTTTGTGCGGGCATCCCGTGAACACATaGTCTGCTGTGGAGCGACCACTGTGCAGATACACCTGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: PVAASAVLCGHPVNT*SAVERPLCRYTCPR
Trigger: GCGAGGGCAGGTGTATCTGCACAGTGGTCGCTCCACAGCAGACCATGTGTTCACGGGATGCCCGCACAAAACAGCTGAGGCAGCTACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252854.8
ENST00000277415.15
ENST00000339720.10
ENST00000371793.8
ENST00000371796.7
ENST00000392991.8
ENST00000539529.5
CDS CCA 90 bp AAGGGCTCTGAGGGTAAGCGGGACGACATAACCCCACTGCTGGATTaGGATTTGGACTGCACATCCTGGGCAGAGCCAGGGAGCCAGCGT +
Preference number: 5 (lower is better)
Translates to: KGSEGKRDDITPLLD*DLDCTSWAEPGSQR
Trigger: ACGCTGGCTCCCTGGCTCTGCCCAGGATGTGCAGTCCAAATCCCAATCCAGCAGTGGGGTTATGTCGTCCCGCTTACCCTCAGAGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CAA 90 bp AAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTCCGCTGCCTCAGCTGTTTaGTGCGGGCATCCCGTGAAC +
Preference number: 5 (lower is better)
Translates to: KTGAPWAAVPAANTGVSSAASAV*CGHPVN
Trigger: GTTCACGGGATGCCCGCACAAAACAGCTGAGGCAGC...GGAAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp GGGGTAGCTCGTGTTCCAGGTCTGCAGGGTCTGCAGGGACACGGGGTCCAGCCTCGGTGGGAGGTGAAATaGTCCGTGTTCATGAAGTCA +
Preference number: 5 (lower is better)
Translates to: GVARVPGLQGLQGHGVQPRWEVK*SVFMKS
Trigger: TGACTTCATGAACACGGACAATTTCACCTCCCACCG...AGGCTGGACCCCGTGTCCCTGCAGACCCTGCAGACCTGGAACACGAGCTACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR CAA 90 bp CTGCAATGGGATGCGAGTTACACTAGCCTACGGCCGGGTGCAGCCCATGGCTCTTCCAGGCTGCGGGTCTaGAGGATGGTCTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: LQWDASYTSLRPGAAHGSSRLRV*RMVSVF
Trigger: GAAGACAGAGACCATCCTCAAGACCCGCAGCCTGGA...AGAGCCATGGGCTGCACCCGGCCGTAGGCTAGTGTAACTCGCATCCCATTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp CCGTTTGAAATGCCCACGATCCCCACACCAGCACGCCACAGGGCTCCTCACTCAACTCAGGGGTGTGTGTaGGGGGTAGGACTAAGGTCC +
Preference number: 5 (lower is better)
Translates to: PFEMPTIPTPARHRAPHSTQGCV*GVGLRS
Trigger: GGACCTTAGTCCTACCCCCAACACACACCCCTGAGT...TGAGTGAGGAGCCCTGTGGCGTGCTGGTGTGGGGATCGTGGGCATTTCAAACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS TCA 90 bp CCTCCAGATGACAATAGCAGCCAAAGACCCCCTCGTGCTGCCCTTTaGACTTCTCAGCAGGGAGTCGGGGGCAGCGGAGTCTTGAGTGAG +
Preference number: 5 (lower is better)
Translates to: PPDDNSSQRPPRAAL*TSQQGVGGSGVLSE
Trigger: CTCACTCAAGACTCCGCTGCCCCCGACTCCCTGCTGAGAAGTTCAAAGGGCAGCACGAGGGGGTCTTTGGCTGCTATTGTCATCTGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS-3UTR CAA 90 bp GGAAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTCTGCCTGGCCAGGTGTaGCTTATGACTCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: GKPGRRGLQFQLQIREFLLPGQV*LMTLLH
Trigger: GTGGAGGAGAGTCATAAGCAACACCTGGCCAGGCAG...AAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp ACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGCTCGAGCCGGAGGTCTaGACAGTCACGGGGTCACTG +
Preference number: 5 (lower is better)
Translates to: TVARMTFLSHRKPEFPQALEPEV*TVTGSL
Trigger: CAGTGACCCCGTGACTGTCAAGACCTCCGGCTCGAG...CGCCTGGGGAAACTCTGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp ACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGTTGCCAGCGTTCTGGTaGGTGGCGTACACGGCCCAC +
Preference number: 5 (lower is better)
Translates to: TVARMTFLSHRKPEFPQALPAFW*VAYTAH
Trigger: GTGGGCCGTGTACGCCACCAACCAGAACGCTGGCAA...CGCCTGGGGAAACTCTGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp CATGGAGGCTTCAGGGTGCCATTAAGGCTTGGAGGGCCCTTGGGTGCGGCCATGGAGGAAAAGCATCTTTaGGCCTGGGCATGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: HGGFRVPLRLGGPLGAAMEEKHL*AWAWRL
Trigger: AAGCCTCCATGCCCAGGCCAAAAGATGCTTTTCCTC...CATGGCCGCACCCAAGGGCCCTCCAAGCCTTAATGGCACCCTGAAGCCTCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS TCA 90 bp GGTGGAGGCATTGGTCTGGTATGCATAGTGGACCTTGGTACCCCCTaGGTAGCCGTTGGTGACGTACAGCGTGCCGCAGATGATGAAGGC +
Preference number: 5 (lower is better)
Translates to: GGGIGLVCIVDLGTP*VAVGDVQRAADDEG
Trigger: GCCTTCATCATCTGCGGCACGCTGTACGTCACCAACGGCTACTCAGGGGGTACCAAGGTCCACTATGCATACCAGACCAATGCCTCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
ENST00000483042.1
CDS-3UTR CAA 90 bp AGCTGCAAATACGGGAGTTTCTTCCGACGTCTGTGGCCCGCCGGCTCGAAAGGGCTCTCCTCCACCTGTTaGAACTTGGACTCCAGTCCT +
Preference number: 5 (lower is better)
Translates to: SCKYGSFFRRLWPAGSKGLSSTC*NLDSSP
Trigger: AGGACTGGAGTCCAAGTTCAAACAGGTGGAGGAGAG...CCCTTTCGAGCCGGCGGGCCACAGACGTCGGAAGAAACTCCCGTATTTGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp CTTGGGTGCGGCCATGTCCAGGACCACCCAGAATCAGCCATCTCTTTGCCAAGGCTGCTGGATTGGGATTaGGACTGCACATCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: LGCGHVQDHPESAISLPRLLDWD*DCTSWA
Trigger: TGCCCAGGATGTGCAGTCCAAATCCCAATCCAGCAG...CCTTGGCAAAGAGATGGCTGATTCTGGGTGGTCCTGGACATGGCCGCACCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CAA 90 bp TTGGGTGCGGCCATGTCCAGGACCACCCAGAATCAGCCATCTCTTTGCCAAGGTCCTTTGTGGGGCAGCTaGCCACTAATCAGGACCTGG +
Preference number: 5 (lower is better)
Translates to: LGAAMSRTTQNQPSLCQGPLWGS*PLIRTW
Trigger: CCAGGTCCTGATTAGTGGCAAGCTGCCCCACAAAGG...ACCTTGGCAAAGAGATGGCTGATTCTGGGTGGTCCTGGACATGGCCGCACCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CAA 90 bp GTTCAGGGTACGACAAGCCCGTTTGAAATGCCCACGATCCCCACACCAGCACGCAAAATGCCTGGGGTCTaGGCTATCCGGCTCTCACTC +
Preference number: 5 (lower is better)
Translates to: VQGTTSPFEMPTIPTPARKMPGV*AIRLSL
Trigger: GAGTGAGAGCCGGATAGCCAAGACCCCAGGCATTTT...GCGTGCTGGTGTGGGGATCGTGGGCATTTCAAACGGGCTTGTCGTACCCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS-3UTR CAA 90 bp ACGTACTTTCCGCATACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCACAGCTCTCCTCAGGGTaGGTGGGCAGCACGCCGGTG +
Preference number: 5 (lower is better)
Translates to: TYFPHTVARMTFLSHRKPQLSSG*VGSTPV
Trigger: CACCGGCGTGCTGCCCACCAACCCTGAGGAGAGCTG...TGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGTATGCGGAAAGTACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371793.8
CDS CCA 90 bp CACAGGCATAGCCCTTTGTGGGGCAGCTTGCCACTAATCAGGACCTaGTTGGCTCTTCTCTGCAGGTATCTGCTCCCCTGTGTGTGCATG +
Preference number: 5 (lower is better)
Translates to: HRHSPLWGSLPLIRT*LALLCRYLLPCVCM
Trigger: CATGCACACACAGGGGAGCAGATACCTGCAGAGAAGAGCCAACCAGGTCCTGATTAGTGGCAAGCTGCCCCACAAAGGGCTATGCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CAA 90 bp GGAAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTCTCTCCTCCACCTGTTaGAACTTGGACTCCAGTCCT +
Preference number: 5 (lower is better)
Translates to: GKPGRRGLQFQLQIREFLLSSTC*NLDSSP
Trigger: AGGACTGGAGTCCAAGTTCAAACAGGTGGAGGAGAG...AAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp AGTTCCAGCTGCAAATACGGGAGTTTCTTCCGACGTCTGTGGCCCGCCGGCTCGCGGTGGGAGGTGAAATaGTCCGTGTTCATGAAGTCA +
Preference number: 5 (lower is better)
Translates to: SSSCKYGSFFRRLWPAGSRWEVK*SVFMKS
Trigger: TGACTTCATGAACACGGACAATTTCACCTCCCACCG...CGAGCCGGCGGGCCACAGACGTCGGAAGAAACTCCCGTATTTGCAGCTGGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp GTCGCATGCAAAGGAGGATCCTGGTTGTATTCAAGGTTCCTTAGTGAAATGGTGCCGGCCGCCGAGAGCTaGGTGGTGTTGAGGCCCACC +
Preference number: 5 (lower is better)
Translates to: VACKGGSWLYSRFLSEMVPAAES*VVLRPT
Trigger: GGTGGGCCTCAACACCACCAAGCTCTCGGCGGCCGG...CACCATTTCACTAAGGAACCTTGAATACAACCAGGATCCTCCTTTGCATGCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392991.8
CDS CCA 90 bp GGTGGGCAGCACGCGTGTCAGTCCCACCTGAAGCGCAGGCCTGACTaGGTCAAACACGTTAATAGGGCTTTTGCATTTACAGAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: GGQHACQSHLKRRPD*VKHVNRAFAFTEGF
Trigger: GAAGCCTTCTGTAAATGCAAAAGCCCTATTAACGTGTTTGACCCAGTCAGGCCTGCGCTTCAGGTGGGACTGACACGCGTGCTGCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339720.10
CDS-3UTR CAA 90 bp AAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTCCCGGTGGGAGGTGAAATaGTCCGTGTTCATGAAGTCA +
Preference number: 5 (lower is better)
Translates to: KTGAPWAAVPAANTGVSSRWEVK*SVFMKS
Trigger: TGACTTCATGAACACGGACAATTTCACCTCCCACCG...GGAAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp TGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCTAGCTTTGGGGCAAAGGTaGCCGGCAGAGAGACGGCGC +
Preference number: 5 (lower is better)
Translates to: CIYGVREFKQCGHSNFTLALGQR*PAERRR
Trigger: GCGCCGTCTCTCTGCCGGCAACCTTTGCCCCAAAGC...TAGAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371796.7
CDS-3UTR CAA 90 bp CATGAAATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTGTATTCAAGGTCAGCTCTCCTCAGGGTaGGTGGGCAGCACGCCGGTG +
Preference number: 5 (lower is better)
Translates to: HEMQLQSHAKEDPGCIQGQLSSG*VGSTPV
Trigger: CACCGGCGTGCTGCCCACCAACCCTGAGGAGAGCTG...ACCTTGAATACAACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATTTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392991.8
CDS TCA 90 bp CTGCTCCCCTGTGTGTGCATGTGTGTGTGTGTGTGTGCACATGAATaGATGCATCTGTCCAGCAACAGTGCACAACCACCACCCTCCACC +
Preference number: 5 (lower is better)
Translates to: LLPCVCMCVCVCAHE*MHLSSNSAQPPPST
Trigger: GGTGGAGGGTGGTGGTTGTGCACTGTTGCTGGACAGATGCATTCATTCATGTGCACACACACACACACACATGCACACACAGGGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS GCA 90 bp TTGTGGGGCAGCTTGCCACTAATCAGGACCTGGTTGGCTCTTCTCTaGAGGTATCTGCTCCCCTGTGTGTGCATGTGTGTGTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: LWGSLPLIRTWLALL*RYLLPCVCMCVCVC
Trigger: ACACACACACACACACATGCACACACAGGGGAGCAGATACCTGCAGAGAAGAGCCAACCAGGTCCTGATTAGTGGCAAGCTGCCCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CAA 90 bp AGCTGCAAATACGGGAGTTTCTTCCGACGTCTGTGGCCCGCCGGCTCGAAAGGGCAAGACCTCTATGGATaGAGACATGTTCTGCACCTT +
Preference number: 5 (lower is better)
Translates to: SCKYGSFFRRLWPAGSKGQDLYG*RHVLHL
Trigger: AAGGTGCAGAACATGTCTCAATCCATAGAGGTCTTG...CCCTTTCGAGCCGGCGGGCCACAGACGTCGGAAGAAACTCCCGTATTTGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp CTGCAATGGGATGCGAGTTACACTAGCCTACGGCCGGGTGCAGCCCATGGCTCTAACTGCAATACCAATTaGGCATCGGCCTTGTACTCT +
Preference number: 5 (lower is better)
Translates to: LQWDASYTSLRPGAAHGSNCNTN*ASALYS
Trigger: AGAGTACAAGGCCGATGCCAAATTGGTATTGCAGTT...AGAGCCATGGGCTGCACCCGGCCGTAGGCTAGTGTAACTCGCATCCCATTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp TATGTACTAGACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTAATCTACTCGAGCCGGAGGTCTaGACAGTCACGGGGTCACTG +
Preference number: 5 (lower is better)
Translates to: YVLDTGPGAMWSLSTVNLLEPEV*TVTGSL
Trigger: CAGTGACCCCGTGACTGTCAAGACCTCCGGCTCGAG...TAGATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTCTAGTACATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp GTAGTGGTACATGTTGTTGTAACCGGCATAGTCCAGGCTGCGGGTCTTGAGGATTCCAGGCTGCGGGTCTaGAGGATGGTCTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: VVVHVVVTGIVQAAGLEDSRLRV*RMVSVF
Trigger: GAAGACAGAGACCATCCTCAAGACCCGCAGCCTGGA...ATCCTCAAGACCCGCAGCCTGGACTATGCCGGTTACAACAACATGTACCACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR CAA 90 bp CCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTGAGATGTGGGAGTATTaGTTCTGGAATGGGATGTCG +
Preference number: 5 (lower is better)
Translates to: PVPSETRVSPGEPFLSAVEMWEY*FWNGMS
Trigger: CGACATCCCATTCCAGAACAAATACTCCCACATCTC...AACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTCTGGTTTCCGATGGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp TGGCAGCAGTTTCACAGGAGTCCCTTTGTGGTGAGGACGTGGGCCCTTGGCTTCTCTTTAGTATGTTGTTaGACCAGAGAGGGACAGGGC +
Preference number: 5 (lower is better)
Translates to: WQQFHRSPFVVRTWALGFSLVCC*TREGQG
Trigger: GCCCTGTCCCTCTCTGGTCAAACAACATACTAAAGA...GAAGCCAAGGGCCCACGTCCTCACCACAAAGGGACTCCTGTGAAACTGCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp TTGGGTGCGGCCATGTCCAGGACCACCCAGAATCAGCCATCTCTTTGCCAAGGTCTAATCAGGACCTGGTaGGCTCTTCTCTGCAGGTAT +
Preference number: 5 (lower is better)
Translates to: LGAAMSRTTQNQPSLCQGLIRTW*ALLCRY
Trigger: ATACCTGCAGAGAAGAGCCAACCAGGTCCTGATTAG...ACCTTGGCAAAGAGATGGCTGATTCTGGGTGGTCCTGGACATGGCCGCACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CAA 90 bp GCCCTTGGGTGCGGCCATGTCCAGGACCACCCAGAATCAGCCATCTCTTTGCCAGAATCAGCCATCTCTTaGCCAAGGTGTCTCAATAAG +
Preference number: 5 (lower is better)
Translates to: ALGCGHVQDHPESAISLPESAIS*PRCLNK
Trigger: CTTATTGAGACACCTTGGCAAAGAGATGGCTGATTC...TGGCAAAGAGATGGCTGATTCTGGGTGGTCCTGGACATGGCCGCACCCAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CAA 90 bp GTGCAAAAAGCTCTCTGGCTCTCTTTCATGGTTACATGGGAGTGGACTGCTTCTGCTGCCTCAGCTGTTTaGTGCGGGCATCCCGTGAAC +
Preference number: 5 (lower is better)
Translates to: VQKALWLSFMVTWEWTASAASAV*CGHPVN
Trigger: GTTCACGGGATGCCCGCACAAAACAGCTGAGGCAGC...AGAAGCAGTCCACTCCCATGTAACCATGAAAGAGAGCCAGAGAGCTTTTTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CAA 90 bp AATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCGCTGCCTCAGCTGTTTaGTGCGGGCATCCCGTGAAC +
Preference number: 5 (lower is better)
Translates to: NVSTGYASSNNVGTATSLAASAV*CGHPVN
Trigger: GTTCACGGGATGCCCGCACAAAACAGCTGAGGCAGC...GAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp GAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTATTGCCAGCGTTCTGGTaGGTGGCGTACACGGCCCAC +
Preference number: 5 (lower is better)
Translates to: EFPQASPSYLRLHDLANLLPAFW*VAYTAH
Trigger: GTGGGCCGTGTACGCCACCAACCAGAACGCTGGCAA...TAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp AGGGAGGAAAAGCATCTTTTGGCCTGGGCATGGAGGCTTCAGGGTGCCATTAAGAACCCCACTGCTGGATaGGGATTTGGACTGCACATC +
Preference number: 5 (lower is better)
Translates to: REEKHLLAWAWRLQGAIKNPTAG*GFGLHI
Trigger: GATGTGCAGTCCAAATCCCAATCCAGCAGTGGGGTT...CTTAATGGCACCCTGAAGCCTCCATGCCCAGGCCAAAAGATGCTTTTCCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS-3UTR CAA 90 bp ACGTACTTTCCGCATACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAGTTGGTGGGCAGCACTaGAGTGAGTTCAGTGCCCAT +
Preference number: 5 (lower is better)
Translates to: TYFPHTVARMTFLSHRKPVGGQH*SEFSAH
Trigger: ATGGGCACTGAACTCACTCAAGTGCTGCCCACCAAC...TGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGTATGCGGAAAGTACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252854.8
CDS-3UTR CAA 90 bp GTCCAGGCTGCGGGTCTTGAGGATGGTCTCTGTCTTCAGGTCAAACCTGATGATAAGTCAACCATGGACTaGTACTCACGTACGAAGCGG +
Preference number: 5 (lower is better)
Translates to: VQAAGLEDGLCLQVKPDDKSTMD*YSRTKR
Trigger: CCGCTTCGTACGTGAGTACAAGTCCATGGTTGACTT...ATCATCAGGTTTGACCTGAAGACAGAGACCATCCTCAAGACCCGCAGCCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR CAA 90 bp CACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCATCCAGGCTGCGGGTCTaGAGGATGGTCTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: HNVSTGYASSNNVGTATSSRLRV*RMVSVF
Trigger: GAAGACAGAGACCATCCTCAAGACCCGCAGCCTGGA...TGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp GGAAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTAATAACAGAAGAACGTaGCACAATGTATCTACGGGG +
Preference number: 5 (lower is better)
Translates to: GKPGRRGLQFQLQIREFLNNRRT*HNVSTG
Trigger: CCCCGTAGATACATTGTGCAACGTTCTTCTGTTATT...AAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp TTCAAACTATTCATGAAATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTGAGAGCTTGGTGGTGTaGAGGCCCACCAGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: FKLFMKCSYSRMQRRILVESLVV*RPTSEG
Trigger: GCCCTCGCTGGTGGGCCTCAACACCACCAAGCTCTC...AACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATTTCATGAATAGTTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392991.8
CDS-3UTR CAA 90 bp GTGCAAAAAGCTCTCTGGCTCTCTTTCATGGTTACATGGGAGTGGACTGCTTCTGTTGGTGGGCAGCACTaGAGTGAGTTCAGTGCCCAT +
Preference number: 5 (lower is better)
Translates to: VQKALWLSFMVTWEWTASVGGQH*SEFSAH
Trigger: ATGGGCACTGAACTCACTCAAGTGCTGCCCACCAAC...AGAAGCAGTCCACTCCCATGTAACCATGAAAGAGAGCCAGAGAGCTTTTTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000277415.15
CDS-3UTR CAA 90 bp ATGCCATCCCTCGATGTCAGAATCCGCACTGCTGATGATTTTTCAAGATCGGTATCCAGGCTGCGGGTCTaGAGGATGGTCTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: MPSLDVRIRTADDFSRSVSRLRV*RMVSVF
Trigger: GAAGACAGAGACCATCCTCAAGACCCGCAGCCTGGA...TACCGATCTTGAAAAATCATCAGCAGTGCGGATTCTGACATCGAGGGATGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp GCTTCAGTATGTACTAGACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTCTTTAGTATGTTGTTaGACCAGAGAGGGACAGGGC +
Preference number: 5 (lower is better)
Translates to: ASVCTRHRSRSYVEPQHGSLVCC*TREGQG
Trigger: GCCCTGTCCCTCTCTGGTCAAACAACATACTAAAGA...ACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTCTAGTACATACTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp GGAAAACCGGGGCGCCGTGGGCTGCAGTTCCAGCTGCAAATACGGGAGTTTCTTATCCAAACTACGGCATaGCATTTACAACAATCATCG +
Preference number: 5 (lower is better)
Translates to: GKPGRRGLQFQLQIREFLIQTTA*HLQQSS
Trigger: CGATGATTGTTGTAAATGCAATGCCGTAGTTTGGAT...AAGAAACTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCGGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp CTGGACGCCACATTCCTCGGAGCTGACCACGATCTAAGGAAATGTTCATGCCATAATTTGGCATCGGCCTaGTACTCTTCCAACACAGGT +
Preference number: 5 (lower is better)
Translates to: LDATFLGADHDLRKCSCHNLASA*YSSNTG
Trigger: ACCTGTGTTGGAAGAGTACAAGGCCGATGCCAAATT...ATGGCATGAACATTTCCTTAGATCGTGGTCAGCTCCGAGGAATGTGGCGTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp GCGGGTCTTGAGGATGGTCTCTGTCTTCAGGTCAAACCTGATGATGATGTGGCTAATTTGGCATCGGCCTaGTACTCTTCCAACACAGGT +
Preference number: 5 (lower is better)
Translates to: AGLEDGLCLQVKPDDDVANLASA*YSSNTG
Trigger: ACCTGTGTTGGAAGAGTACAAGGCCGATGCCAAATT...AGCCACATCATCATCAGGTTTGACCTGAAGACAGAGACCATCCTCAAGACCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR CAA 90 bp CATGTTGTTGTAACCGGCATAGTCCAGGCTGCGGGTCTTGAGGATGGTCTCTGTAACTGCAATACCAATTaGGCATCGGCCTTGTACTCT +
Preference number: 5 (lower is better)
Translates to: HVVVTGIVQAAGLEDGLCNCNTN*ASALYS
Trigger: AGAGTACAAGGCCGATGCCAAATTGGTATTGCAGTT...ACAGAGACCATCCTCAAGACCCGCAGCCTGGACTATGCCGGTTACAACAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545657.1
CDS-3UTR CAA 90 bp ACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAGAGTTTCCCCAGGCGAATAACAGAAGAACGTaGCACAATGTATCTACGGGG +
Preference number: 5 (lower is better)
Translates to: TVARMTFLSHRKPEFPQANNRRT*HNVSTG
Trigger: CCCCGTAGATACATTGTGCAACGTTCTTCTGTTATT...CGCCTGGGGAAACTCTGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp TTGTTCAGGGTACGACAAGCCCGTTTGAAATGCCCACGATCCCCACACCAGCACTTCTCTATTGATACATaGTTCAGGGTACGACAAGCC +
Preference number: 5 (lower is better)
Translates to: LFRVRQARLKCPRSPHQHFSIDT*FRVRQA
Trigger: GGCTTGTCGTACCCTGAACAATGTATCAATAGAGAA...GTGCTGGTGTGGGGATCGTGGGCATTTCAAACGGGCTTGTCGTACCCTGAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS CCA 90 bp GCGCCAATTTCCTCTTGCAGCTCGTTAAGCACTGACGTCAGATTCTaGACCTCCTCTTTAAACTGCAATACCAATTTGGCATCGGCCTTG +
Preference number: 5 (lower is better)
Translates to: APISSCSSLSTDVRF*TSSLNCNTNLASAL
Trigger: CAAGGCCGATGCCAAATTGGTATTGCAGTTTAAAGAGGAGGTCCAGAATCTGACGTCAGTGCTTAACGAGCTGCAAGAGGAAATTGGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
ENST00000539529.5
ENST00000539877.5
ENST00000545657.1
CDS CCA 90 bp ATTTGTTCTGGAATGGGATGTCGATGTATTCATAGGTGGAGGCATTaGTCTGGTATGCATAGTGGACCTTGGTACCCCCTGAGTAGCCGT +
Preference number: 5 (lower is better)
Translates to: ICSGMGCRCIHRWRH*SGMHSGPWYPLSSR
Trigger: ACGGCTACTCAGGGGGTACCAAGGTCCACTATGCATACCAGACCAATGCCTCCACCTATGAATACATCGACATCCCATTCCAGAACAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
ENST00000483042.1
CDS CCA 90 bp TGTGGGAGTATTTGTTCTGGAATGGGATGTCGATGTATTCATAGGTaGAGGCATTGGTCTGGTATGCATAGTGGACCTTGGTACCCCCTG +
Preference number: 5 (lower is better)
Translates to: CGSICSGMGCRCIHR*RHWSGMHSGPWYPL
Trigger: CAGGGGGTACCAAGGTCCACTATGCATACCAGACCAATGCCTCCACCTATGAATACATCGACATCCCATTCCAGAACAAATACTCCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
ENST00000483042.1
CDS-3UTR CAA 90 bp ACGTACTTTCCGCATACTGTTGCCCGTATGACTTTCCTGTCCCATCGGAAACCAAATTTGGCATCGGCCTaGTACTCTTCCAACACAGGT +
Preference number: 5 (lower is better)
Translates to: TYFPHTVARMTFLSHRKPNLASA*YSSNTG
Trigger: ACCTGTGTTGGAAGAGTACAAGGCCGATGCCAAATT...TGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGTATGCGGAAAGTACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp ACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACACTGGCCAACAGTCATaGCCTCGCCTCTTTAGTATG +
Preference number: 5 (lower is better)
Translates to: TMYLRGTRVQTMWAQQLHTGQQS*PRLFSM
Trigger: CATACTAAAGAGGCGAGGCAATGACTGTTGGCCAGT...GTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp CACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCAACTGGCCAACAGTCATaGCCTCGCCTCTTTAGTATG +
Preference number: 5 (lower is better)
Translates to: HNVSTGYASSNNVGTATSTGQQS*PRLFSM
Trigger: CATACTAAAGAGGCGAGGCAATGACTGTTGGCCAGT...TGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS TCA 90 bp ACGTTAATAGGGCTTTTGCATTTACAGAAGGCTTCTAATCGGAGATaGAAGCCACTTCCTCCGGGGCCTTCCATTAAGCTTTCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: TLIGLLHLQKASNRR*KPLPPGPSIKLSQP
Trigger: TGGCTGGGAAAGCTTAATGGAAGGCCCCGGAGGAAGTGGCTTTCATCTCCGATTAGAAGCCTTCTGTAAATGCAAAAGCCCTATTAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339720.10
CDS-3UTR CAA 90 bp AGAAACACGGAGGTAATGCCATCCCTCGATGTCAGAATCCGCACTGCTGATGATCAAGACCTCTATGGATaGAGACATGTTCTGCACCTT +
Preference number: 5 (lower is better)
Translates to: RNTEVMPSLDVRIRTADDQDLYG*RHVLHL
Trigger: AAGGTGCAGAACATGTCTCAATCCATAGAGGTCTTG...ATCATCAGCAGTGCGGATTCTGACATCGAGGGATGGCATTACCTCCGTGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp CACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCCAGTCCTTTCATTaGGTTCTCCATCTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: HNVSTGYASSNNVGTATSLQSFH*VLHLLH
Trigger: GTGGAGAAGATGGAGAACCAAATGAAAGGACTGGAG...TGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp GACCACGATCTAAGGAAATGTTCATGCCATCCTAACAGTGGGTTTTTCCCCGGTCTCCAGTCCTTTCATTaGGTTCTCCATCTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: DHDLRKCSCHPNSGFFPGLQSFH*VLHLLH
Trigger: GTGGAGAAGATGGAGAACCAAATGAAAGGACTGGAG...ACCGGGGAAAAACCCACTGTTAGGATGGCATGAACATTTCCTTAGATCGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp TGCATGGTGCAAAAAGCTCTCTGGCTCTCTTTCATGGTTACATGGGAGTGGACTCTCCAGTCCTTTCATTaGGTTCTCCATCTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: CMVQKALWLSFMVTWEWTLQSFH*VLHLLH
Trigger: GTGGAGAAGATGGAGAACCAAATGAAAGGACTGGAG...AGTCCACTCCCATGTAACCATGAAAGAGAGCCAGAGAGCTTTTTGCACCATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CAA 90 bp GCACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCAACTGCAATACCAATTaGGCATCGGCCTTGTACTCT +
Preference number: 5 (lower is better)
Translates to: AQCIYGVREFKQCGHSNFNCNTN*ASALYS
Trigger: AGAGTACAAGGCCGATGCCAAATTGGTATTGCAGTT...GAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp ATGCCATCCCTCGATGTCAGAATCCGCACTGCTGATGATTTTTCAAGATCGGTAAAGTCAACCATGGACTaGTACTCACGTACGAAGCGG +
Preference number: 5 (lower is better)
Translates to: MPSLDVRIRTADDFSRSVKSTMD*YSRTKR
Trigger: CCGCTTCGTACGTGAGTACAAGTCCATGGTTGACTT...TACCGATCTTGAAAAATCATCAGCAGTGCGGATTCTGACATCGAGGGATGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp TATGTACTAGACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTAATCTAGAGATGTGGGAGTATTaGTTCTGGAATGGGATGTCG +
Preference number: 5 (lower is better)
Translates to: YVLDTGPGAMWSLSTVNLEMWEY*FWNGMS
Trigger: CGACATCCCATTCCAGAACAAATACTCCCACATCTC...TAGATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTCTAGTACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp TATGTACTAGACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTAATCTATCTTTAGTATGTTGTTaGACCAGAGAGGGACAGGGC +
Preference number: 5 (lower is better)
Translates to: YVLDTGPGAMWSLSTVNLSLVCC*TREGQG
Trigger: GCCCTGTCCCTCTCTGGTCAAACAACATACTAAAGA...TAGATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTCTAGTACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp CACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACAAGACCTCTATGGATaGAGACATGTTCTGCACCTT +
Preference number: 5 (lower is better)
Translates to: HNVSTGYASSNNVGTATSQDLYG*RHVLHL
Trigger: AAGGTGCAGAACATGTCTCAATCCATAGAGGTCTTG...TGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp GAAATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTGTATTCAAGGTTCCCAAGACCTCTATGGATaGAGACATGTTCTGCACCTT +
Preference number: 5 (lower is better)
Translates to: EMQLQSHAKEDPGCIQGSQDLYG*RHVLHL
Trigger: AAGGTGCAGAACATGTCTCAATCCATAGAGGTCTTG...GGAACCTTGAATACAACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CAA 90 bp GTCGCATGCAAAGGAGGATCCTGGTTGTATTCAAGGTTCCTTAGTGAAATGGTGCTCCAGTCCTTTCATTaGGTTCTCCATCTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: VACKGGSWLYSRFLSEMVLQSFH*VLHLLH
Trigger: GTGGAGAAGATGGAGAACCAAATGAAAGGACTGGAG...CACCATTTCACTAAGGAACCTTGAATACAACCAGGATCCTCCTTTGCATGCGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CAA 90 bp ACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCCACCTGTTTGAACTaGGACTCCAGTCCTTTCATT +
Preference number: 5 (lower is better)
Translates to: TMYLRGTRVQTMWAQQLHSTCLN*DSSPFI
Trigger: AATGAAAGGACTGGAGTCCAAGTTCAAACAGGTGGA...GTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp AATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCTCCACCTGTTTGAACTaGGACTCCAGTCCTTTCATT +
Preference number: 5 (lower is better)
Translates to: NVSTGYASSNNVGTATSLSTCLN*DSSPFI
Trigger: AATGAAAGGACTGGAGTCCAAGTTCAAACAGGTGGA...GAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp GAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTAAATTTGGCATCGGCCTaGTACTCTTCCAACACAGGT +
Preference number: 5 (lower is better)
Translates to: EFPQASPSYLRLHDLANLNLASA*YSSNTG
Trigger: ACCTGTGTTGGAAGAGTACAAGGCCGATGCCAAATT...TAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp AGTTACCACCTCAAGGGAATAACAGAAGAACGTTGCACAATGTATCTACGGGGTAAGTCAACCATGGACTaGTACTCACGTACGAAGCGG +
Preference number: 5 (lower is better)
Translates to: SYHLKGITEERCTMYLRGKSTMD*YSRTKR
Trigger: CCGCTTCGTACGTGAGTACAAGTCCATGGTTGACTT...ACCCCGTAGATACATTGTGCAACGTTCTTCTGTTATTCCCTTGAGGTGGTAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp AGTTACCACCTCAAGGGAATAACAGAAGAACGTTGCACAATGTATCTACGGGGTCGGTGGGAGGTGAAATaGTCCGTGTTCATGAAGTCA +
Preference number: 5 (lower is better)
Translates to: SYHLKGITEERCTMYLRGRWEVK*SVFMKS
Trigger: TGACTTCATGAACACGGACAATTTCACCTCCCACCG...ACCCCGTAGATACATTGTGCAACGTTCTTCTGTTATTCCCTTGAGGTGGTAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp GAGTTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTAGAGATGTGGGAGTATTaGTTCTGGAATGGGATGTCG +
Preference number: 5 (lower is better)
Translates to: EFPQASPSYLRLHDLANLEMWEY*FWNGMS
Trigger: CGACATCCCATTCCAGAACAAATACTCCCACATCTC...TAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp GACACAGGTCCAGGAGCTATGTGGAGCCTCAGCACGGTTAATCTAAGAGACAGCGTATTGTTAGTGTTATaGGTATCTTTTTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: DTGPGAMWSLSTVNLRDSVLLVL*VSFWQQ
Trigger: CTGCTGCCAAAAAGATACCAATAACACTAACAATAC...GCTGTCTCTTAGATTAACCGTGCTGAGGCTCCACATAGCTCCTGGACCTGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp TTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTAACAACTGGCCAACAGTCATaGCCTCGCCTCTTTAGTATG +
Preference number: 5 (lower is better)
Translates to: FPQASPSYLRLHDLANLTTGQQS*PRLFSM
Trigger: CATACTAAAGAGGCGAGGCAATGACTGTTGGCCAGT...TGTTAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp TCTGGCTCTCTTTCATGGTTACATGGGAGTGGACTGCTTCTTCAGTCACTGCAGAAAGGAGGATCCTGGTaGTATTCAAGGTTCCTTAGT +
Preference number: 5 (lower is better)
Translates to: SGSLSWLHGSGLLLQSLQKGGSW*YSRFLS
Trigger: ACTAAGGAACCTTGAATACAACCAGGATCCTCCTTT...CTGCAGTGACTGAAGAAGCAGTCCACTCCCATGTAACCATGAAAGAGAGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS TCA 90 bp ATTTTCGCTTTTATCGCCTTAAACTGCCTGGCCAGGTGTTGCTTATaGCTCTCCTCCACCTGTTTGAACTTGGACTCCAGTCCTTTCATT +
Preference number: 5 (lower is better)
Translates to: IFAFIALNCLARCCL*LSSTCLNLDSSPFI
Trigger: AATGAAAGGACTGGAGTCCAAGTTCAAACAGGTGGAGGAGAGTCATAAGCAACACCTGGCCAGGCAGTTTAAGGCGATAAAAGCGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252854.8
ENST00000339720.10
ENST00000371793.8
ENST00000371796.7
ENST00000539529.5
ENST00000539877.5
CDS-3UTR CAA 90 bp ATAATAGTAAAAATGCATGGTGCAAAAAGCTCTCTGGCTCTCTTTCATGGTTACCTGCCTGGCCAGGTGTaGCTTATGACTCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: IIVKMHGAKSSLALFHGYLPGQV*LMTLLH
Trigger: GTGGAGGAGAGTCATAAGCAACACCTGGCCAGGCAG...GTAACCATGAAAGAGAGCCAGAGAGCTTTTTGCACCATGCATTTTTACTATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CAA 90 bp ATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCTAATAACAGAAGAACGTaGCACAATGTATCTACGGGG +
Preference number: 5 (lower is better)
Translates to: MYLRGTRVQTMWAQQLHSNNRRT*HNVSTG
Trigger: CCCCGTAGATACATTGTGCAACGTTCTTCTGTTATT...AGAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp TGCATGGTGCAAAAAGCTCTCTGGCTCTCTTTCATGGTTACATGGGAGTGGACTAAAGGAGGATCCTGGTaGTATTCAAGGTTCCTTAGT +
Preference number: 5 (lower is better)
Translates to: CMVQKALWLSFMVTWEWTKGGSW*YSRFLS
Trigger: ACTAAGGAACCTTGAATACAACCAGGATCCTCCTTT...AGTCCACTCCCATGTAACCATGAAAGAGAGCCAGAGAGCTTTTTGCACCATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CAA 90 bp TTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTAACATCCACCTGTTTGAACTaGGACTCCAGTCCTTTCATT +
Preference number: 5 (lower is better)
Translates to: FPQASPSYLRLHDLANLTSTCLN*DSSPFI
Trigger: AATGAAAGGACTGGAGTCCAAGTTCAAACAGGTGGA...TGTTAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp GGAAAGGTCTTTATTGTCAGTTTAGAATGCAACATCTTAAGGTTACATGCTTTGCTGCCTGGCCAGGTGTaGCTTATGACTCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: GKVFIVSLECNILRLHALLPGQV*LMTLLH
Trigger: GTGGAGGAGAGTCATAAGCAACACCTGGCCAGGCAG...CAAAGCATGTAACCTTAAGATGTTGCATTCTAAACTGACAATAAAGACCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277415.15
CDS-3UTR CAA 90 bp TTTCCCCAGGCGAGCCCTTCCTATCTGCGGTTACATGATTTAGCTAATTTAACAAACTGCAATACCAATTaGGCATCGGCCTTGTACTCT +
Preference number: 5 (lower is better)
Translates to: FPQASPSYLRLHDLANLTNCNTN*ASALYS
Trigger: AGAGTACAAGGCCGATGCCAAATTGGTATTGCAGTT...TGTTAAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGCCTGGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp AATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCACTCATCCAAACTACGGCATaGCATTTACAACAATCATCG +
Preference number: 5 (lower is better)
Translates to: NVSTGYASSNNVGTATSLIQTTA*HLQQSS
Trigger: CGATGATTGTTGTAAATGCAATGCCGTAGTTTGGAT...GAGTGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp CACAATGTATCTACGGGGTACGCGAGTTCAAACAATGTGGGCACAGCAACTTCAATCCAAACTACGGCATaGCATTTACAACAATCATCG +
Preference number: 5 (lower is better)
Translates to: HNVSTGYASSNNVGTATSIQTTA*HLQQSS
Trigger: CGATGATTGTTGTAAATGCAATGCCGTAGTTTGGAT...TGAAGTTGCTGTGCCCACATTGTTTGAACTCGCGTACCCCGTAGATACATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp TTCAAACTATTCATGAAATGCAGCTACAGTCGCATGCAAAGGAGGATCCTGGTTCAAGACCTCTATGGATaGAGACATGTTCTGCACCTT +
Preference number: 5 (lower is better)
Translates to: FKLFMKCSYSRMQRRILVQDLYG*RHVLHL
Trigger: AAGGTGCAGAACATGTCTCAATCCATAGAGGTCTTG...AACCAGGATCCTCCTTTGCATGCGACTGTAGCTGCATTTCATGAATAGTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CAA 90 bp GGAAAGGTCTTTATTGTCAGTTTAGAATGCAACATCTTAAGGTTACATGCTTTGCTCTCCTCCACCTGTTaGAACTTGGACTCCAGTCCT +
Preference number: 5 (lower is better)
Translates to: GKVFIVSLECNILRLHALLSSTC*NLDSSP
Trigger: AGGACTGGAGTCCAAGTTCAAACAGGTGGAGGAGAG...CAAAGCATGTAACCTTAAGATGTTGCATTCTAAACTGACAATAAAGACCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277415.15
CDS-3UTR CAA 90 bp AATAATAGTAAAAATGCATGGTGCAAAAAGCTCTCTGGCTCTCTTTCATGGTTACTCTCCTCCACCTGTTaGAACTTGGACTCCAGTCCT +
Preference number: 5 (lower is better)
Translates to: NNSKNAWCKKLSGSLSWLLSSTC*NLDSSP
Trigger: AGGACTGGAGTCCAAGTTCAAACAGGTGGAGGAGAG...TAACCATGAAAGAGAGCCAGAGAGCTTTTTGCACCATGCATTTTTACTATTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CAA 90 bp CACTTATTAATCCAAACTACGGCATTGCATTTACAACAATCATCGCATAAACTGAAGTCAACCATGGACTaGTACTCACGTACGAAGCGG +
Preference number: 5 (lower is better)
Translates to: HLLIQTTALHLQQSSHKLKSTMD*YSRTKR
Trigger: CCGCTTCGTACGTGAGTACAAGTCCATGGTTGACTT...CAGTTTATGCGATGATTGTTGTAAATGCAATGCCGTAGTTTGGATTAATAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp CACTTATTAATCCAAACTACGGCATTGCATTTACAACAATCATCGCATAAACTGCTCCAGTCCTTTCATTaGGTTCTCCATCTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: HLLIQTTALHLQQSSHKLLQSFH*VLHLLH
Trigger: GTGGAGAAGATGGAGAACCAAATGAAAGGACTGGAG...CAGTTTATGCGATGATTGTTGTAAATGCAATGCCGTAGTTTGGATTAATAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS-3UTR CAA 90 bp ATAATAGTAAAAATGCATGGTGCAAAAAGCTCTCTGGCTCTCTTTCATGGTTACTCCACCTGTTTGAACTaGGACTCCAGTCCTTTCATT +
Preference number: 5 (lower is better)
Translates to: IIVKMHGAKSSLALFHGYSTCLN*DSSPFI
Trigger: AATGAAAGGACTGGAGTCCAAGTTCAAACAGGTGGA...GTAACCATGAAAGAGAGCCAGAGAGCTTTTTGCACCATGCATTTTTACTATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS-3UTR CAA 90 bp AATAATAGTAAAAATGCATGGTGCAAAAAGCTCTCTGGCTCTCTTTCATGGTTATCCACCTGTTTGAACTaGGACTCCAGTCCTTTCATT +
Preference number: 5 (lower is better)
Translates to: NNSKNAWCKKLSGSLSWLSTCLN*DSSPFI
Trigger: AATGAAAGGACTGGAGTCCAAGTTCAAACAGGTGGA...TAACCATGAAAGAGAGCCAGAGAGCTTTTTGCACCATGCATTTTTACTATTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000392991.8
CDS CCA 90 bp TTTTACATCTTTACAGGCAGATCTGAATTGAGTCTAGCCTCAAGATaGAACTTTAATATTCAACAGGATTCCAGGGAGCTTAAAAGAAAA +
Preference number: 5 (lower is better)
Translates to: FYIFTGRSELSLASR*NFNIQQDSRELKRK
Trigger: TTTTCTTTTAAGCTCCCTGGAATCCTGTTGAATATTAAAGTTCCATCTTGAGGCTAGACTCAATTCAGATCTGCCTGTAAAGATGTAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539877.5
CDS-3UTR CAA 90 bp GATGATTTTTCAAGATCGGTATTGTTAGTGTTATTGGTATCTTTTTGGCAGCAGGTATTGTTAGTGTTATaGGTATCTTTTTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: DDFSRSVLLVLLVSFWQQVLLVL*VSFWQQ
Trigger: CTGCTGCCAAAAAGATACCAATAACACTAACAATAC...CTGCTGCCAAAAAGATACCAATAACACTAACAATACCGATCTTGAAAAATCATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
CDS CCA 72 bp TCGCGCCTCGAGCTGCCTCCAGCGCCCGCTCCGAGCTaGCACCGGCTCCCGCGCCCAGGCGGCCTTCAGGCG +
Preference number: 6 (lower is better)
Translates to: SRLELPPAPAPS*HRLPRPGGLQA
Trigger: CGCCTGAAGGCCGCCTGGGCGCGGGAGCCGGTGCCAGCTCGGAGCGGGCGCTGGAGGCAGCTCGAGGCGCGA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371793.8
ENST00000392991.8
CDS CCA 72 bp CACCTCCAACGACCTGGCATGCAGGGCCCTGGGTGCTaGCCGGCCGGCGGCTGCGTGGACGCGGACGCGCTC +
Preference number: 6 (lower is better)
Translates to: HLQRPGMQGPGC*PAGGCVDADAL
Trigger: GAGCGCGTCCGCGTCCACGCAGCCGCCGGCCGGCCAGCACCCAGGGCCCTGCATGCCAGGTCGTTGGAGGTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252854.8
ENST00000277415.15
ENST00000371799.8
CDS GCA 72 bp GCGGCGCGCGGGCTCTGCTGCGCGAAGCCTCCGCTCTaGATATTTATCGCGTCCCGGTTCCGGCGCGTCTGC +
Preference number: 6 (lower is better)
Translates to: AARGLCCAKPPL*IFIASRFRRVC
Trigger: GCAGACGCGCCGGAACCGGGACGCGATAAATATGCAGAGCGGAGGCTTCGCGCAGCAGAGCCCGCGCGCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277415.15
ENST00000371799.8
CDS GCA 72 bp GGGGCCCCGGCCCGCGGTGATGACCCTGACCTCGACTaGCCAGAGCACACGTGCCATGTGGCGGCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: GAPARGDDPDLD*PEHTCHVAASP
Trigger: AGGAGAAGCCGCCACATGGCACGTGTGCTCTGGGCAGTCGAGGTCAGGGTCATCACCGCGGGCCGGGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS CAA 90 bp TCCCGCAGGAAGAGCCTGCGCGCTTCTCCCACAGGCGTGAGCCGGTaGCTTCTGCCAGTGGGAGGAGCCCAAGCTGGAGCGCACCAGGGC +
Preference number: 6 (lower is better)
Translates to: SRRKSLRASPTGVSR*LLPVGGAQAGAHQG
Trigger: GCCCTGGTGCGCTCCAGCTTGGGCTCCTCCCACTGGCAGAAGCAACCGGCTCACGCCTGTGGGAGAAGCGCGCAGGCTCTTCCTGCGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS TCA 72 bp GCGGCTCCACCCCCAAGGGCATTAGAGGTCATGCCCTaGCAGCCCAGCCCGCGTGGGGCACAGTCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: AAPPPRALEVMP*QPSPRGAQSGP
Trigger: TGGGCCTGACTGTGCCCCACGCGGGCTGGGCTGTCAGGGCATGACCTCTAATGCCCTTGGGGGTGGAGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS GCA 72 bp AGGCTGAGGAGCTTCCGGGCCGGGTGCATGTCTCGCTaGCACCTCCAACGACCTGGCATGCAGGGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: RLRSFRAGCMSR*HLQRPGMQGPG
Trigger: CCCAGGGCCCTGCATGCCAGGTCGTTGGAGGTGGCAGCGAGACATGCACCCGGCCCGGAAGCTCCTCAGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252854.8
ENST00000277415.15
ENST00000371799.8
ENST00000371801.4
CDS GCA 72 bp ACACCCCCGAGGGCTCAGGGCGGCTTCCACACCCACTaGACAGGAACAGAACTCCTCCTGCCCGGAGGCCGG +
Preference number: 6 (lower is better)
Translates to: TPPRAQGGFHTH*TGTELLLPGGR
Trigger: CCGGCCTCCGGGCAGGAGGAGTTCTGTTCCTGTGCAGTGGGTGTGGAAGCCGCCCTGAGCCCTCGGGGGTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS GCA 72 bp GCCGCCCCGGAACTGACCCGGGACAAAGGCCACAGCTaGCTTCCCGCAGGAAGAGCCTGCGCGCTTCTCCCA +
Preference number: 6 (lower is better)
Translates to: AAPELTRDKGHS*LPAGRACALLP
Trigger: TGGGAGAAGCGCGCAGGCTCTTCCTGCGGGAAGGCAGCTGTGGCCTTTGTCCCGGGTCAGTTCCGGGGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS CCA 72 bp GGGCATCCCTCTCCGATCCCCGCAGAGGGTCCGCTTTaGGGCAAAGGTTGCCGGCAGAGAGACGGCGCCGTC +
Preference number: 6 (lower is better)
Translates to: GHPSPIPAEGPL*GKGCRQRDGAV
Trigger: GACGGCGCCGTCTCTCTGCCGGCAACCTTTGCCCCAAAGCGGACCCTCTGCGGGGATCGGAGAGGGATGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371796.7
CDS TCA 72 bp ACGATGGAGCAGCAGCACCACCAGCCGCCCCGGAACTaGCCCGGGACAAAGGCCACAGCTGCCTTCCCGCAG +
Preference number: 6 (lower is better)
Translates to: TMEQQHHQPPRN*PGTKATAAFPQ
Trigger: CTGCGGGAAGGCAGCTGTGGCCTTTGTCCCGGGTCAGTTCCGGGGCGGCTGGTGGTGCTGCTGCTCCATCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS GCA 72 bp CCGATCCCCGCAGAGGGTCCGCTTTGGGGCAAAGGTTaGCGGCAGAGAGACGGCGCCGTCCTGCCTACTGGA +
Preference number: 6 (lower is better)
Translates to: PIPAEGPLWGKG*RQRDGAVLPTG
Trigger: TCCAGTAGGCAGGACGGCGCCGTCTCTCTGCCGGCAACCTTTGCCCCAAAGCGGACCCTCTGCGGGGATCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371796.7
CDS CAA 72 bp TCCGATCCCCGCAGAGGGTCCGCTTTGGGGCAAAGGTaGCCGGCAGAGAGACGGCGCCGTCCTGCCTACTGG +
Preference number: 6 (lower is better)
Translates to: SDPRRGSALGQR*PAERRRRPAYW
Trigger: CCAGTAGGCAGGACGGCGCCGTCTCTCTGCCGGCAACCTTTGCCCCAAAGCGGACCCTCTGCGGGGATCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371796.7
CDS GCA 72 bp AAGCCAGCAATGCACACAGCTGGCCGGCACGCTGGCTaGCCTTCCAGGTCTCAGCGGCACAATCCCCACCGC +
Preference number: 6 (lower is better)
Translates to: KPAMHTAGRHAG*PSRSQRHNPHR
Trigger: GCGGTGGGGATTGTGCCGCTGAGACCTGGAAGGGCAGCCAGCGTGCCGGCCAGCTGTGTGCATTGCTGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371801.4
CDS GCA 72 bp CCGGTGTGTCTGCGCAGCCACGCAGCTCTTCCAGAATaGACGAGCCTCGGCCGCCCTCTGAAGGGCCAAACG +
Preference number: 6 (lower is better)
Translates to: PVCLRSHAALPE*TSLGRPLKGQT
Trigger: CGTTTGGCCCTTCAGAGGGCGGCCGAGGCTCGTGCATTCTGGAAGAGCTGCGTGGCTGCGCAGACACACCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS GCA 72 bp GCTTCCACACCCACTGCACAGGAACAGAACTCCTCCTaGCCGGAGGCCGGTGTGTCTGCGCAGCCACGCAGC +
Preference number: 6 (lower is better)
Translates to: ASTPTAQEQNSS*PEAGVSAQPRS
Trigger: GCTGCGTGGCTGCGCAGACACACCGGCCTCCGGGCAGGAGGAGTTCTGTTCCTGTGCAGTGGGTGTGGAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS CCA 72 bp GTGAGACACTGCATCCAGGCAGGCCCTGTCCCACGATaGAGCAGCAGCACCACCAGCCGCCCCGGAACTGAC +
Preference number: 6 (lower is better)
Translates to: VRHCIQAGPVPR*SSSTTSRPGTD
Trigger: GTCAGTTCCGGGGCGGCTGGTGGTGCTGCTGCTCCATCGTGGGACAGGGCCTGCCTGGATGCAGTGTCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS CAA 90 bp GCATCCCTCTCCGATCCCCGCAGAGGGTCCGCTTTGGGGCAAAGGTaGCCGGCAGAGAGACGGCGCCGTCCTGCCTACTGGAGCCCTTTT +
Preference number: 6 (lower is better)
Translates to: ASLSDPRRGSALGQR*PAERRRRPAYWSPF
Trigger: AAAAGGGCTCCAGTAGGCAGGACGGCGCCGTCTCTCTGCCGGCAACCTTTGCCCCAAAGCGGACCCTCTGCGGGGATCGGAGAGGGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371796.7
CDS GCA 72 bp GGAACAGAACTCCTCCTGCCCGGAGGCCGGTGTGTCTaGGCAGCCACGCAGCTCTTCCAGAATGCACGAGCC +
Preference number: 6 (lower is better)
Translates to: GTELLLPGGRCV*AATQLFQNARA
Trigger: GGCTCGTGCATTCTGGAAGAGCTGCGTGGCTGCGCAGACACACCGGCCTCCGGGCAGGAGGAGTTCTGTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS GCA 72 bp GGTGATGACCCTGACCTCGACTGCCCAGAGCACACGTaGCATGTGGCGGCTTCTCCTCTTGCCCTCGGGGTC +
Preference number: 6 (lower is better)
Translates to: GDDPDLDCPEHT*HVAASPLALGV
Trigger: GACCCCGAGGGCAAGAGGAGAAGCCGCCACATGGCACGTGTGCTCTGGGCAGTCGAGGTCAGGGTCATCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS GCA 72 bp CCCAGAGCACACGTGCCATGTGGCGGCTTCTCCTCTTaGCCTCGGGGTCTGGGGTACTGTGGAAAGCTGCTC +
Preference number: 6 (lower is better)
Translates to: PRAHVPCGGFSS*PRGLGYCGKLL
Trigger: GAGCAGCTTTCCACAGTACCCCAGACCCCGAGGGCAAGAGGAGAAGCCGCCACATGGCACGTGTGCTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS CCA 72 bp CACGGGGTCACTGATGCCCGTCAACTTCCCGCAAGCTaGAAAAGAGCACGCAGGTCAGGAGAGGGAGGGCGG +
Preference number: 6 (lower is better)
Translates to: HGVTDARQLPAS*KRARRSGEGGR
Trigger: CCGCCCTCCCTCTCCTGACCTGCGTGCTCTTTTCCAGCTTGCGGGAAGTTGACGGGCATCAGTGACCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS CAA 72 bp GCCCAGAGCACACGTGCCATGTGGCGGCTTCTCCTCTaGCCCTCGGGGTCTGGGGTACTGTGGAAAGCTGCT +
Preference number: 6 (lower is better)
Translates to: AQSTRAMWRLLL*PSGSGVLWKAA
Trigger: AGCAGCTTTCCACAGTACCCCAGACCCCGAGGGCAAGAGGAGAAGCCGCCACATGGCACGTGTGCTCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS CAA 90 bp ACCTCGACTGCCCAGAGCACACGTGCCATGTGGCGGCTTCTCCTCTaGCCCTCGGGGTCTGGGGTACTGTGGAAAGCTGCTCACGCCCTT +
Preference number: 6 (lower is better)
Translates to: TSTAQSTRAMWRLLL*PSGSGVLWKAAHAL
Trigger: AAGGGCGTGAGCAGCTTTCCACAGTACCCCAGACCCCGAGGGCAAGAGGAGAAGCCGCCACATGGCACGTGTGCTCTGGGCAGTCGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS CCA 72 bp CTCCTAGAGGCCATGCAGAACCTCTCCAGGAGGGACTaGCTGATCGTCTGGGCAGCACCAGGAGAAGGGCTC +
Preference number: 6 (lower is better)
Translates to: LLEAMQNLSRRD*LIVWAAPGEGL
Trigger: GAGCCCTTCTCCTGGTGCTGCCCAGACGATCAGCCAGTCCCTCCTGGAGAGGTTCTGCATGGCCTCTAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS CCA 72 bp GAGGGTAAGCGGGACGACATAACCCCACTGCTGGATTaGGATTTGGACTGCACATCCTGGGCAGAGCCAGGG +
Preference number: 6 (lower is better)
Translates to: EGKRDDITPLLD*DLDCTSWAEPG
Trigger: CCCTGGCTCTGCCCAGGATGTGCAGTCCAAATCCCAATCCAGCAGTGGGGTTATGTCGTCCCGCTTACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS CCA 72 bp GCCTCAGCTGTTTTGTGCGGGCATCCCGTGAACACATaGTCTGCTGTGGAGCGACCACTGTGCAGATACACC +
Preference number: 6 (lower is better)
Translates to: ASAVLCGHPVNT*SAVERPLCRYT
Trigger: GGTGTATCTGCACAGTGGTCGCTCCACAGCAGACCATGTGTTCACGGGATGCCCGCACAAAACAGCTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252854.8
ENST00000277415.15
ENST00000339720.10
ENST00000371793.8
ENST00000371796.7
ENST00000392991.8
ENST00000539529.5
CDS CAA 72 bp TCTGTCATCCAGGATCCGAACCTCGAGCCGGAGGTCTaGACAGTCACGGGGTCACTGATGCCCGTCAACTTC +
Preference number: 6 (lower is better)
Translates to: SVIQDPNLEPEV*TVTGSLMPVNF
Trigger: GAAGTTGACGGGCATCAGTGACCCCGTGACTGTCAAGACCTCCGGCTCGAGGTTCGGATCCTGGATGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
ENST00000483042.1
ENST00000539877.5
CDS TCA 72 bp TTCCAGGAGGAGGGAGCTACAACTCGTCGGAGCGGATaGCGTGGAAGAGGGTCACGTTGTAGAGGATCTGGT +
Preference number: 6 (lower is better)
Translates to: FQEEGATTRRSG*RGRGSRCRGSG
Trigger: ACCAGATCCTCTACAACGTGACCCTCTTCCACGTCATCCGCTCCGACGAGTTGTAGCTCCCTCCTCCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
ENST00000483042.1
CDS TCA 72 bp ATTGGTCTGGTATGCATAGTGGACCTTGGTACCCCCTaGGTAGCCGTTGGTGACGTACAGCGTGCCGCAGAT +
Preference number: 6 (lower is better)
Translates to: IGLVCIVDLGTP*VAVGDVQRAAD
Trigger: ATCTGCGGCACGCTGTACGTCACCAACGGCTACTCAGGGGGTACCAAGGTCCACTATGCATACCAGACCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
ENST00000483042.1
CDS CCA 72 bp CAAGGTGTCTCAATAAGACACAGGCATAGCCCTTTGTaGGGCAGCTTGCCACTAATCAGGACCTGGTTGGCT +
Preference number: 6 (lower is better)
Translates to: QGVSIRHRHSPL*GSLPLIRTWLA
Trigger: AGCCAACCAGGTCCTGATTAGTGGCAAGCTGCCCCACAAAGGGCTATGCCTGTGTCTTATTGAGACACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS CAA 72 bp TCAATAAGACACAGGCATAGCCCTTTGTGGGGCAGCTaGCCACTAATCAGGACCTGGTTGGCTCTTCTCTGC +
Preference number: 6 (lower is better)
Translates to: SIRHRHSPLWGS*PLIRTWLALLC
Trigger: GCAGAGAAGAGCCAACCAGGTCCTGATTAGTGGCAAGCTGCCCCACAAAGGGCTATGCCTGTGTCTTATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS CAA 72 bp TGCCAAGGTGTCTCAATAAGACACAGGCATAGCCCTTaGTGGGGCAGCTTGCCACTAATCAGGACCTGGTTG +
Preference number: 6 (lower is better)
Translates to: CQGVSIRHRHSP*WGSLPLIRTWL
Trigger: CAACCAGGTCCTGATTAGTGGCAAGCTGCCCCACAAAGGGCTATGCCTGTGTCTTATTGAGACACCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS CAA 90 bp CAAGGTGTCTCAATAAGACACAGGCATAGCCCTTTGTGGGGCAGCTaGCCACTAATCAGGACCTGGTTGGCTCTTCTCTGCAGGTATCTG +
Preference number: 6 (lower is better)
Translates to: QGVSIRHRHSPLWGS*PLIRTWLALLCRYL
Trigger: CAGATACCTGCAGAGAAGAGCCAACCAGGTCCTGATTAGTGGCAAGCTGCCCCACAAAGGGCTATGCCTGTGTCTTATTGAGACACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS CAA 90 bp CCATCTCTTTGCCAAGGTGTCTCAATAAGACACAGGCATAGCCCTTaGTGGGGCAGCTTGCCACTAATCAGGACCTGGTTGGCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: PSLCQGVSIRHRHSP*WGSLPLIRTWLALL
Trigger: GAGAAGAGCCAACCAGGTCCTGATTAGTGGCAAGCTGCCCCACAAAGGGCTATGCCTGTGTCTTATTGAGACACCTTGGCAAAGAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371799.8
CDS GCA 72 bp TGCTGGAGCAGCACCTCTAGGAGAGGGGGTCAGCTTTaGCAAGACTCAATTTTCTTCTCTTGGAGATGGGAA +
Preference number: 6 (lower is better)
Translates to: CWSSTSRRGGQL*QDSIFFSWRWE
Trigger: TTCCCATCTCCAAGAGAAGAAAATTGAGTCTTGGCAAAGCTGACCCCCTCTCCTAGAGGTGCTGCTCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483042.1
CDS CCA 72 bp GGAATGGGATGTCGATGTATTCATAGGTGGAGGCATTaGTCTGGTATGCATAGTGGACCTTGGTACCCCCTG +
Preference number: 6 (lower is better)
Translates to: GMGCRCIHRWRH*SGMHSGPWYPL
Trigger: CAGGGGGTACCAAGGTCCACTATGCATACCAGACCAATGCCTCCACCTATGAATACATCGACATCCCATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
ENST00000483042.1
CDS CAA 90 bp ATGACTCTCCTCCACCTGTTTGAACTTGGACTCCAGTCCTTTCATTaGGTTCTCCATCTTCTCCACGTACTGCAAGTCTCTCTGGGTCCG +
Preference number: 6 (lower is better)
Translates to: MTLLHLFELGLQSFH*VLHLLHVLQVSLGP
Trigger: CGGACCCAGAGAGACTTGCAGTACGTGGAGAAGATGGAGAACCAAATGAAAGGACTGGAGTCCAAGTTCAAACAGGTGGAGGAGAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252854.8
ENST00000277415.15
ENST00000339720.10
ENST00000371793.8
ENST00000371796.7
ENST00000392991.8
ENST00000539529.5
ENST00000539877.5
CDS TCA 72 bp GGGCTTTTGCATTTACAGAAGGCTTCTAATCGGAGATaGAAGCCACTTCCTCCGGGGCCTTCCATTAAGCTT +
Preference number: 6 (lower is better)
Translates to: GLLHLQKASNRR*KPLPPGPSIKL
Trigger: AAGCTTAATGGAAGGCCCCGGAGGAAGTGGCTTTCATCTCCGATTAGAAGCCTTCTGTAAATGCAAAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339720.10
CDS TCA 72 bp ATAGGCGCCAATTTCCTCTTGCAGCTCGTTAAGCACTaGCGTCAGATTCTGGACCTCCTCTTTAAACTGCAA +
Preference number: 6 (lower is better)
Translates to: IGANFLLQLVKH*RQILDLLFKLQ
Trigger: TTGCAGTTTAAAGAGGAGGTCCAGAATCTGACGTCAGTGCTTAACGAGCTGCAAGAGGAAATTGGCGCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
ENST00000539529.5
ENST00000539877.5
ENST00000545657.1
CDS CCA 72 bp TCCACCTGTTTGAACTTGGACTCCAGTCCTTTCATTTaGTTCTCCATCTTCTCCACGTACTGCAAGTCTCTC +
Preference number: 6 (lower is better)
Translates to: STCLNLDSSPFI*FSIFSTYCKSL
Trigger: GAGAGACTTGCAGTACGTGGAGAAGATGGAGAACCAAATGAAAGGACTGGAGTCCAAGTTCAAACAGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252854.8
ENST00000277415.15
ENST00000339720.10
ENST00000371793.8
ENST00000371796.7
ENST00000392991.8
ENST00000539529.5
ENST00000539877.5
CDS CCA 72 bp GCAAGTCTCTCTGGGTCCGCCTGTCCAAGACCTCTATaGATTGAGACATGTTATGTACATTCTGAGCATAGA +
Preference number: 6 (lower is better)
Translates to: ASLSGSACPRPL*IETCYVHSEHR
Trigger: TCTATGCTCAGAATGTACATAACATGTCTCAATCCATAGAGGTCTTGGACAGGCGGACCCAGAGAGACTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539877.5
CDS CAA 72 bp GTCTCTCTGGGTCCGCCTGTCCAAGACCTCTATGGATaGAGACATGTTATGTACATTCTGAGCATAGAGTCA +
Preference number: 6 (lower is better)
Translates to: VSLGPPVQDLYG*RHVMYILSIES
Trigger: TGACTCTATGCTCAGAATGTACATAACATGTCTCAATCCATAGAGGTCTTGGACAGGCGGACCCAGAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539877.5
CDS CCA 72 bp TCCTCTTGCAGCTCGTTAAGCACTGACGTCAGATTCTaGACCTCCTCTTTAAACTGCAATACCAATTTGGCA +
Preference number: 6 (lower is better)
Translates to: SSCSSLSTDVRF*TSSLNCNTNLA
Trigger: TGCCAAATTGGTATTGCAGTTTAAAGAGGAGGTCCAGAATCTGACGTCAGTGCTTAACGAGCTGCAAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
ENST00000539529.5
ENST00000539877.5
ENST00000545657.1
CDS CCA 72 bp ATTTGTTCTGGAATGGGATGTCGATGTATTCATAGGTaGAGGCATTGGTCTGGTATGCATAGTGGACCTTGG +
Preference number: 6 (lower is better)
Translates to: ICSGMGCRCIHR*RHWSGMHSGPW
Trigger: CCAAGGTCCACTATGCATACCAGACCAATGCCTCCACCTATGAATACATCGACATCCCATTCCAGAACAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
ENST00000483042.1
CDS CAA 72 bp AGATTCTGGACCTCCTCTTTAAACTGCAATACCAATTaGGCATCGGCCTTGTACTCTTCCAACACAGGTATC +
Preference number: 6 (lower is better)
Translates to: RFWTSSLNCNTN*ASALYSSNTGI
Trigger: GATACCTGTGTTGGAAGAGTACAAGGCCGATGCCAAATTGGTATTGCAGTTTAAAGAGGAGGTCCAGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
ENST00000539529.5
ENST00000539877.5
ENST00000545657.1
CDS CAA 90 bp TTCTGGACCTCCTCTTTAAACTGCAATACCAATTTGGCATCGGCCTaGTACTCTTCCAACACAGGTATCAAAGGCCTAAGTTCATCCATT +
Preference number: 6 (lower is better)
Translates to: FWTSSLNCNTNLASA*YSSNTGIKGLSSSI
Trigger: AATGGATGAACTTAGGCCTTTGATACCTGTGTTGGAAGAGTACAAGGCCGATGCCAAATTGGTATTGCAGTTTAAAGAGGAGGTCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
ENST00000539529.5
ENST00000539877.5
ENST00000545657.1
CDS CAA 72 bp TCCTCTTTAAACTGCAATACCAATTTGGCATCGGCCTaGTACTCTTCCAACACAGGTATCAAAGGCCTAAGT +
Preference number: 6 (lower is better)
Translates to: SSLNCNTNLASA*YSSNTGIKGLS
Trigger: ACTTAGGCCTTTGATACCTGTGTTGGAAGAGTACAAGGCCGATGCCAAATTGGTATTGCAGTTTAAAGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252854.8
ENST00000371793.8
ENST00000371796.7
ENST00000539529.5
ENST00000539877.5
ENST00000545657.1
CDS TCA 72 bp TCTGAGCATAGAGTCAGGAATCAATCACCCAGCAAATaGAGAATCGCTGTTTTACATCTTTACAGGCAGATC +
Preference number: 6 (lower is better)
Translates to: SEHRVRNQSPSK*RIAVLHLYRQI
Trigger: GATCTGCCTGTAAAGATGTAAAACAGCGATTCTTCATTTGCTGGGTGATTGATTCCTGACTCTATGCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539877.5
CDS CCA 72 bp TTTACAGGCAGATCTGAATTGAGTCTAGCCTCAAGATaGAACTTTAATATTCAACAGGATTCCAGGGAGCTT +
Preference number: 6 (lower is better)
Translates to: FTGRSELSLASR*NFNIQQDSREL
Trigger: AAGCTCCCTGGAATCCTGTTGAATATTAAAGTTCCATCTTGAGGCTAGACTCAATTCAGATCTGCCTGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539877.5