RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OGT (Homo sapiens)

Ensembl gene IDs: ENSG00000147162

Ensembl transcript IDs: ENST00000373701.7, ENST00000373719.8, ENST00000444774.3, ENST00000455587.3, ENST00000459760.1, ENST00000462638.1, ENST00000466181.1, ENST00000472270.1, ENST00000474633.1, ENST00000488174.5, ENST00000498566.3

Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGCGGCCGGACAATCTATATCTCCCCTCCACACTAACCATCCCATaGAAGACCAAGGGAGATCAGACCTTCCAGACCTATGCACCATCT +
Preference number: 1 (lower is better)
Translates to: KRPDNLYLPSTLTIP*KTKGDQTFQTYAPS
Trigger: AGATGGTGCATAGGTCTGGAAGGTCTGATCTCCCTTGGTCTTCCATGGGATGGTTAGTGTGGAGGGGAGATATAGATTGTCCGGCCGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR GCA 90 bp AACCATCCCATGGAAGACCAAGGGAGATCAGACCTTCCAGACCTATaGACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGTGGA +
Preference number: 1 (lower is better)
Translates to: NHPMEDQGRSDLPDL*TIWSPQNSTEIPCG
Trigger: TCCACAAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGTCTGATCTCCCTTGGTCTTCCATGGGATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR CCA 90 bp ATGGAAGACCAAGGGAGATCAGACCTTCCAGACCTATGCACCATCTaGTCGCCGCAAAATTCTACGGAGATTCCTTGTGGAAAAGCAGTT +
Preference number: 1 (lower is better)
Translates to: MEDQGRSDLPDLCTI*SPQNSTEIPCGKAV
Trigger: AACTGCTTTTCCACAAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGTCTGATCTCCCTTGGTCTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR GCA 90 bp GCCTGTTACAATAAGCAAAGCTTCAACCAGAGCGGCTACTTTTCGTaGCAGGAAAAAGTTCATCCCTATAGGAGGAATGATGTGCTATGT +
Preference number: 1 (lower is better)
Translates to: ACYNKQSFNQSGYFS*QEKVHPYRRNDVLC
Trigger: ACATAGCACATCATTCCTCCTATAGGGATGAACTTTTTCCTGGCACGAAAAGTAGCCGCTCTGGTTGAAGCTTTGCTTATTGTAACAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR GCA 90 bp CATCTTTTGTGTCTCTCCCTACCATGCAGGAAGCAAGTCTGGCTGTaGTATTCTATTACCATTATATATCACCCATCTGCAACAAGGTAC +
Preference number: 1 (lower is better)
Translates to: HLLCLSLPCRKQVWL*YSITIIYHPSATRY
Trigger: GTACCTTGTTGCAGATGGGTGATATATAATGGTAATAGAATAGCACAGCCAGACTTGCTTCCTGCATGGTAGGGAGAGACACAAAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR CCA 90 bp GTTTCCCATCTTTTGTGTCTCTCCCTACCATGCAGGAAGCAAGTCTaGCTGTGCTATTCTATTACCATTATATATCACCCATCTGCAACA +
Preference number: 1 (lower is better)
Translates to: VSHLLCLSLPCRKQV*LCYSITIIYHPSAT
Trigger: TGTTGCAGATGGGTGATATATAATGGTAATAGAATAGCACAGCCAGACTTGCTTCCTGCATGGTAGGGAGAGACACAAAAGATGGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR GCA 90 bp CCTTGTGGAAAAGCAGTTTCCCATCTTTTGTGTCTCTCCCTACCATaGAGGAAGCAAGTCTGGCTGTGCTATTCTATTACCATTATATAT +
Preference number: 1 (lower is better)
Translates to: PCGKAVSHLLCLSLP*RKQVWLCYSITIIY
Trigger: ATATATAATGGTAATAGAATAGCACAGCCAGACTTGCTTCCTGCATGGTAGGGAGAGACACAAAAGATGGGAAACTGCTTTTCCACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR GCA 90 bp TTATTAATCAATAATTTGTCAGCTAGGATACATTCAGGCATCAGCTaGAACTACAGAATAGGTGCACAGCCTCAGCGCTTTGGAAAGACA +
Preference number: 1 (lower is better)
Translates to: LLINNLSARIHSGIS*NYRIGAQPQRFGKT
Trigger: TGTCTTTCCAAAGCGCTGAGGCTGTGCACCTATTCTGTAGTTGCAGCTGATGCCTGAATGTATCCTAGCTGACAAATTATTGATTAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR GCA 90 bp GCAAGTCTGGCTGTGCTATTCTATTACCATTATATATCACCCATCTaGAACAAGGTACTGTACAGACAAGTAAGAAGTATGTTATCTAGT +
Preference number: 1 (lower is better)
Translates to: ASLAVLFYYHYISPI*NKVLYRQVRSMLSS
Trigger: ACTAGATAACATACTTCTTACTTGTCTGTACAGTACCTTGTTGCAGATGGGTGATATATAATGGTAATAGAATAGCACAGCCAGACTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR-3UTR GCA 90 bp AAGCCTGTTACAATAAGCAAAGCTTCAACCAGAGCGGCTACTTTTCGTGCCAGGGACCTTCCAGACCTATaGACCATCTGGTCGCCGCAA +
Preference number: 2 (lower is better)
Translates to: KPVTISKASTRAATFRARDLPDL*TIWSPQ
Trigger: TTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGTC...CCTGGCACGAAAAGTAGCCGCTCTGGTTGAAGCTTTGCTTATTGTAACAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR-3UTR GCA 90 bp GACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTATATATCACCCATCTaGAACAAGGTACTGTACAGA +
Preference number: 2 (lower is better)
Translates to: DLPDLCTIWSPQNSTEIPYISPI*NKVLYR
Trigger: TCTGTACAGTACCTTGTTGCAGATGGGTGATATATA...AGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR-3UTR TCA 90 bp GTTTATAAAACCTATAAAAAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGTTTCCCCCAGAAGGTTaGGGCTCAGGTATAGGGGTA +
Preference number: 2 (lower is better)
Translates to: VYKTYKKTTPAKSLSICQFPPEG*GSGIGV
Trigger: TACCCCTATACCTGAGCCTCAACCTTCTGGGGGAAA...CTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR-3UTR TCA 90 bp AAGCCTGTTACAATAAGCAAAGCTTCAACCAGAGCGGCTACTTTTCGTGCCAGGAAAAATCCAGAAGACTaGATCAATCCATGGAATCAC +
Preference number: 2 (lower is better)
Translates to: KPVTISKASTRAATFRARKNPED*INPWNH
Trigger: GTGATTCCATGGATTGATTCAGTCTTCTGGATTTTT...CCTGGCACGAAAAGTAGCCGCTCTGGTTGAAGCTTTGCTTATTGTAACAGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR-3UTR GCA 90 bp ACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTAAGCAAGTCTGGCTGTaGTATTCTATTACCATTATA +
Preference number: 2 (lower is better)
Translates to: TFQTYAPSGRRKILRRFLKQVWL*YSITII
Trigger: TATAATGGTAATAGAATAGCACAGCCAGACTTGCTT...AAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR-3UTR CCA 90 bp AAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGAGTTCAGAAACTAAAACAACACTAACCATCCCATaGAAGACCAAGGGAGATCAG +
Preference number: 2 (lower is better)
Translates to: KTTPAKSLSICQSSETKTTLTIP*KTKGDQ
Trigger: CTGATCTCCCTTGGTCTTCCATGGGATGGTTAGTGT...TGTTTTAGTTTCTGAACTCTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR-3UTR GCA 90 bp AAGTTCTTATTAATCAATAATTTGTCAGCTAGGATACATTCAGGCATCAGCTGCTGTCTCTCCCTACCATaGAGGAAGCAAGTCTGGCTG +
Preference number: 2 (lower is better)
Translates to: KFLLINNLSARIHSGISCCLSLP*RKQVWL
Trigger: CAGCCAGACTTGCTTCCTGCATGGTAGGGAGAGACA...GCAGCTGATGCCTGAATGTATCCTAGCTGACAAATTATTGATTAATAAGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR-3UTR CCA 90 bp ACAGCAGTGCAGTTCGCTACTACTGAGGCTGAATCTGTACAGACTTCAAGACCACTAAAAATCTTCATTTaGCACCAGATGGTGTGTTTA +
Preference number: 2 (lower is better)
Translates to: TAVQFATTEAESVQTSRPLKIFI*HQMVCL
Trigger: TAAACACACCATCTGGTGCCAAATGAAGATTTTTAG...TGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGTAGCGAACTGCACTGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR-3UTR CCA 90 bp TGTTCATTAACATGTAATTCTGGTTCAGAATTACCTTTGAGACTCCTTGCTCAATGCAGGAAGCAAGTCTaGCTGTGCTATTCTATTACC +
Preference number: 2 (lower is better)
Translates to: CSLTCNSGSELPLRLLAQCRKQV*LCYSIT
Trigger: GGTAATAGAATAGCACAGCCAGACTTGCTTCCTGCA...TTGAGCAAGGAGTCTCAAAGGTAATTCTGAACCAGAATTACATGTTAATGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR-3UTR TCA 90 bp AAGTTCTTATTAATCAATAATTTGTCAGCTAGGATACATTCAGGCATCAGCTGCCCCTCGACCCTTTGTTaGGATCCCATAATTTTATTC +
Preference number: 2 (lower is better)
Translates to: KFLLINNLSARIHSGISCPSTLC*DPIILF
Trigger: GAATAAAATTATGGGATCTCAACAAAGGGTCGAGGG...GCAGCTGATGCCTGAATGTATCCTAGCTGACAAATTATTGATTAATAAGAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR-3UTR CCA 90 bp AAGTTCTTATTAATCAATAATTTGTCAGCTAGGATACATTCAGGCATCAGCTGCTACGGAGATTCCTTGTaGAAAAGCAGTTTCCCATCT +
Preference number: 2 (lower is better)
Translates to: KFLLINNLSARIHSGISCYGDSL*KSSFPS
Trigger: AGATGGGAAACTGCTTTTCCACAAGGAATCTCCGTA...GCAGCTGATGCCTGAATGTATCCTAGCTGACAAATTATTGATTAATAAGAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR-3UTR TCA 90 bp TGTTCATTAACATGTAATTCTGGTTCAGAATTACCTTTGAGACTCCTTGCTCAAAGGGTAAAACACTGGTaGAACAGGTCAAAATTAGGA +
Preference number: 2 (lower is better)
Translates to: CSLTCNSGSELPLRLLAQRVKHW*NRSKLG
Trigger: TCCTAATTTTGACCTGTTTCACCAGTGTTTTACCCT...TTGAGCAAGGAGTCTCAAAGGTAATTCTGAACCAGAATTACATGTTAATGAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR CCA 72 bp CAAGGGAGATCAGACCTTCCAGACCTATGCACCATCTaGTCGCCGCAAAATTCTACGGAGATTCCTTGTGGA +
Preference number: 3 (lower is better)
Translates to: QGRSDLPDLCTI*SPQNSTEIPCG
Trigger: TCCACAAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGTCTGATCTCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR GCA 72 bp ATGGAAGACCAAGGGAGATCAGACCTTCCAGACCTATaGACCATCTGGTCGCCGCAAAATTCTACGGAGATT +
Preference number: 3 (lower is better)
Translates to: MEDQGRSDLPDL*TIWSPQNSTEI
Trigger: AATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGTCTGATCTCCCTTGGTCTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR CCA 72 bp GACAATCTATATCTCCCCTCCACACTAACCATCCCATaGAAGACCAAGGGAGATCAGACCTTCCAGACCTAT +
Preference number: 3 (lower is better)
Translates to: DNLYLPSTLTIP*KTKGDQTFQTY
Trigger: ATAGGTCTGGAAGGTCTGATCTCCCTTGGTCTTCCATGGGATGGTTAGTGTGGAGGGGAGATATAGATTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR-3UTR CAA 90 bp AAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGAGTTCAGAAACTAAAACACTTTCCCCCAGAAGGTaGAGGCTCAGGTATAGGGGT +
Preference number: 3 (lower is better)
Translates to: KTTPAKSLSICQSSETKTLSPRR*RLRYRG
Trigger: ACCCCTATACCTGAGCCTCAACCTTCTGGGGGAAAG...TGTTTTAGTTTCTGAACTCTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR GCA 72 bp TGTCTCTCCCTACCATGCAGGAAGCAAGTCTGGCTGTaGTATTCTATTACCATTATATATCACCCATCTGCA +
Preference number: 3 (lower is better)
Translates to: CLSLPCRKQVWL*YSITIIYHPSA
Trigger: TGCAGATGGGTGATATATAATGGTAATAGAATAGCACAGCCAGACTTGCTTCCTGCATGGTAGGGAGAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR GCA 72 bp AATAATTTGTCAGCTAGGATACATTCAGGCATCAGCTaGAACTACAGAATAGGTGCACAGCCTCAGCGCTTT +
Preference number: 3 (lower is better)
Translates to: NNLSARIHSGIS*NYRIGAQPQRF
Trigger: AAAGCGCTGAGGCTGTGCACCTATTCTGTAGTTGCAGCTGATGCCTGAATGTATCCTAGCTGACAAATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR GCA 72 bp AATAAGCAAAGCTTCAACCAGAGCGGCTACTTTTCGTaGCAGGAAAAAGTTCATCCCTATAGGAGGAATGAT +
Preference number: 3 (lower is better)
Translates to: NKQSFNQSGYFS*QEKVHPYRRND
Trigger: ATCATTCCTCCTATAGGGATGAACTTTTTCCTGGCACGAAAAGTAGCCGCTCTGGTTGAAGCTTTGCTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR-3UTR CAA 90 bp AAGTTCTTATTAATCAATAATTTGTCAGCTAGGATACATTCAGGCATCAGCTGCGCAGTTTCCCATCTTTaGTGTCTCTCCCTACCATGC +
Preference number: 3 (lower is better)
Translates to: KFLLINNLSARIHSGISCAVSHL*CLSLPC
Trigger: GCATGGTAGGGAGAGACACAAAAGATGGGAAACTGC...GCAGCTGATGCCTGAATGTATCCTAGCTGACAAATTATTGATTAATAAGAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
3UTR GCA 72 bp GCTGTGCTATTCTATTACCATTATATATCACCCATCTaGAACAAGGTACTGTACAGACAAGTAAGAAGTATG +
Preference number: 3 (lower is better)
Translates to: AVLFYYHYISPI*NKVLYRQVRSM
Trigger: CATACTTCTTACTTGTCTGTACAGTACCTTGTTGCAGATGGGTGATATATAATGGTAATAGAATAGCACAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp GACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGCTGTCGGCCACGTTaGCCACGGAAGACGCCATCT +
Preference number: 4 (lower is better)
Translates to: DLPDLCTIWSPQNSTEIPCCRPR*PRKTPS
Trigger: AGATGGCGTCTTCCGTGGGCAACGTGGCCGACAGCA...AGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp AAGCCTGTTACAATAAGCAAAGCTTCAACCAGAGCGGCTACTTTTCGTGCCAGGAGCGACCCAGGGCTTTaGGCAGGTTCCCCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: KPVTISKASTRAATFRARSDPGL*AGSPGH
Trigger: GTGACCTGGGGAACCTGCTCAAAGCCCTGGGTCGCT...CCTGGCACGAAAAGTAGCCGCTCTGGTTGAAGCTTTGCTTATTGTAACAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp CCATCTTTTGTGTCTCTCCCTACCATGCAGGAAGCAAGTCTGGCTGTGCTATTCTTCCATGTCACCCGCTaGTACCAAGGCGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PSFVSLPTMQEASLAVLFFHVTR*YQGGCQ
Trigger: CTGGCAGCCGCCTTGGTAGCAGCGGGTGACATGGAA...GAATAGCACAGCCAGACTTGCTTCCTGCATGGTAGGGAGAGACACAAAAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp GACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTGAGAGTCTGCATGGGTaGGACACAGACGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: DLPDLCTIWSPQNSTEIPESLHG*DTDGEL
Trigger: CAGCTCTCCGTCTGTGTCCCACCCATGCAGACTCTC...AGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp ACAGCAGTGCAGTTCGCTACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAATGCTCTGGAGGGCTTaGGCGGCGGCAGCAGTTACA +
Preference number: 4 (lower is better)
Translates to: TAVQFATTEAESVQTSRPMLWRA*AAAAVT
Trigger: TGTAACTGCTGCCGCCGCTCAAGCCCTCCAGAGCAT...TGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGTAGCGAACTGCACTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp GACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTGACGTAAGCTTGTACTaGCCCTTCCATGTCACCCGC +
Preference number: 4 (lower is better)
Translates to: DLPDLCTIWSPQNSTEIPDVSLY*PFHVTR
Trigger: GCGGGTGACATGGAAGGGGCAGTACAAGCTTACGTC...AGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp ACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTTTTCCCCCAGAAGGTTaGGGCTCAGGTATAGGGGTA +
Preference number: 4 (lower is better)
Translates to: TFQTYAPSGRRKILRRFLFPPEG*GSGIGV
Trigger: TACCCCTATACCTGAGCCTCAACCTTCTGGGGGAAA...AAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTTGCATCAGAGCTTCCTaGAGTTTTCCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TFQTYAPSGRRKILRRFLCIRAS*SFPCCC
Trigger: GCAGCAGCAGGGAAAACTGCAGGAAGCTCTGATGCA...AAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp CCATCTTTTGTGTCTCTCCCTACCATGCAGGAAGCAAGTCTGGCTGTGCTATTCGTATCCCAGCCACATTaGCTGAATAGGAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PSFVSLPTMQEASLAVLFVSQPH*LNRSWP
Trigger: AGGCCAGCTCCTATTCAGGCAATGTGGCTGGGATAC...GAATAGCACAGCCAGACTTGCTTCCTGCATGGTAGGGAGAGACACAAAAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp CTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGTGGAAAAGCAGACCTTCCAGACCTATaGACCATCTGGTCGCCGCAA +
Preference number: 4 (lower is better)
Translates to: LCTIWSPQNSTEIPCGKADLPDL*TIWSPQ
Trigger: TTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGTC...TGCTTTTCCACAAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp ACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTTTCAGAGAGTCTGCATaGGTGGGACACAGACGGAGA +
Preference number: 4 (lower is better)
Translates to: TFQTYAPSGRRKILRRFLFRESA*VGHRRR
Trigger: TCTCCGTCTGTGTCCCACCCATGCAGACTCTCTGAA...AAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp CTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGTGGAAAAGCACCGTGCACCACTGCGTaGTTTGGACTCAAACTTAGG +
Preference number: 4 (lower is better)
Translates to: LCTIWSPQNSTEIPCGKAPCTTA*FGLKLR
Trigger: CCTAAGTTTGAGTCCAAATCACGCAGTGGTGCACGG...TGCTTTTCCACAAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp ACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGCAGCCGACCATCACTaGGCTTCAAGTCTTTTGGAT +
Preference number: 4 (lower is better)
Translates to: TFQTYAPSGRRKILRRFLAADHH*ASSLLD
Trigger: ATCCAAAAGACTTGAAGCTCAGTGATGGTCGGCTGC...AAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp CTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGTGGAAAAGCAGGTAATTGGTCCTGCTaGCGCCACTACCAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: LCTIWSPQNSTEIPCGKAGNWSC*RHYQQE
Trigger: TTCTTGCTGGTAGTGGCGGCAGCAGGACCAATTACC...TGCTTTTCCACAAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ACAGCAGTGCAGTTCGCTACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAAAGCACAGGTTGCCGTaGCTCTCAGCAATAGCCTTC +
Preference number: 4 (lower is better)
Translates to: TAVQFATTEAESVQTSRPKHRLP*LSAIAF
Trigger: GAAGGCTATTGCTGAGAGGCACGGCAACCTGTGCTT...TGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGTAGCGAACTGCACTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp AAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGAGTTCAGAAACTAAAACACACCATGGGGGTCCCTaGCCAGAGGACATCCATCCC +
Preference number: 4 (lower is better)
Translates to: KTTPAKSLSICQSSETKTHHGGP*PEDIHP
Trigger: GGGATGGATGTCCTCTGGGCAGGGACCCCCATGGTG...TGTTTTAGTTTCTGAACTCTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp ACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGTGCCCATTACAGAGTaGAGTGTCCAAGCAGACATC +
Preference number: 4 (lower is better)
Translates to: TFQTYAPSGRRKILRRFLVPITE*SVQADI
Trigger: GATGTCTGCTTGGACACTCCACTCTGTAATGGGCAC...AAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp ACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGACCTATGCACCATCTaGTCGCCGCAAAATTCTACG +
Preference number: 4 (lower is better)
Translates to: TFQTYAPSGRRKILRRFLDLCTI*SPQNST
Trigger: CGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTC...AAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp CCATCTTTTGTGTCTCTCCCTACCATGCAGGAAGCAAGTCTGGCTGTGCTATTCTCTGGTAACCCGTACTaGGAACGGGTGGTTACAATA +
Preference number: 4 (lower is better)
Translates to: PSFVSLPTMQEASLAVLFSGNPY*ERVVTI
Trigger: TATTGTAACCACCCGTTCTCAGTACGGGTTACCAGA...GAATAGCACAGCCAGACTTGCTTCCTGCATGGTAGGGAGAGACACAAAAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp CTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGTGGAAAAGCATCTTGTCTCCAGAGCTaGATGCAGTGTCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LCTIWSPQNSTEIPCGKASCLQS*MQCLSA
Trigger: AGCTGAGAGACACTGCATGCAGCTCTGGAGACAAGA...TGCTTTTCCACAAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp CCATCTTTTGTGTCTCTCCCTACCATGCAGGAAGCAAGTCTGGCTGTGCTATTCTCGATAATGCTCAATTaGCTCCTGCAACTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PSFVSLPTMQEASLAVLFSIMLN*LLQLPS
Trigger: AGAGGGCAGTTGCAGGAGGCAATTGAGCATTATCGA...GAATAGCACAGCCAGACTTGCTTCCTGCATGGTAGGGAGAGACACAAAAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp GACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTACGATACAAGCGAACTaGCTCTTCAATGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: DLPDLCTIWSPQNSTEIPTIQAN*LFNVSL
Trigger: CAGGGAAACATTGAAGAGGCAGTTCGCTTGTATCGT...AGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTAGGTTTGTTGCCAGCTaGATAATGCTCCCACATCTG +
Preference number: 4 (lower is better)
Translates to: TFQTYAPSGRRKILRRFLRFVAS*IMLPHL
Trigger: CAGATGTGGGAGCATTATGCAGCTGGCAACAAACCT...AAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp ACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTCTCAGCAACTTCAGCTaGCGAAGTTTCCTGATCAGT +
Preference number: 4 (lower is better)
Translates to: TFQTYAPSGRRKILRRFLLSNFS*RSFLIS
Trigger: ACTGATCAGGAAACTTCGCCAGCTGAAGTTGCTGAG...AAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp CTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGTGGAAAAGCACCTAAGCAAGTGAGCTaGGATGCTGCAACTCGAGAA +
Preference number: 4 (lower is better)
Translates to: LCTIWSPQNSTEIPCGKAPKQVS*DAATRE
Trigger: TTCTCGAGTTGCAGCATCCCAGCTCACTTGCTTAGG...TGCTTTTCCACAAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp CCATCTTTTGTGTCTCTCCCTACCATGCAGGAAGCAAGTCTGGCTGTGCTATTCTGCCTCAAAATCTCCTaGCTGATATTCTCGATGTGC +
Preference number: 4 (lower is better)
Translates to: PSFVSLPTMQEASLAVLFCLKIS*LIFSMC
Trigger: GCACATCGAGAATATCAGGCAGGAGATTTTGAGGCA...GAATAGCACAGCCAGACTTGCTTCCTGCATGGTAGGGAGAGACACAAAAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ACAGCAGTGCAGTTCGCTACTACTGAGGCTGAATCTGTACAGACTTCAAGACCATGCTACCAAGGCGGCTaGCAGGTTAATATAACCATC +
Preference number: 4 (lower is better)
Translates to: TAVQFATTEAESVQTSRPCYQGG*QVNITI
Trigger: GATGGTTATATTAACCTGGCAGCCGCCTTGGTAGCA...TGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGTAGCGAACTGCACTGCTGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp CTACGGAGATTCCTTGTGGAAAAGCAGTTTCCCATCTTTTGTGTCTCTCCCTACGGTTCCCCAGGTCACTaGGAACACAGTACAAATCAG +
Preference number: 4 (lower is better)
Translates to: LRRFLVEKQFPIFCVSPYGSPGH*EHSTNQ
Trigger: CTGATTTGTACTGTGTTCGCAGTGACCTGGGGAACC...GTAGGGAGAGACACAAAAGATGGGAAACTGCTTTTCCACAAGGAATCTCCGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGGCACGAAGATAAGCTaGCACAGCTCTGTCAAAAAT +
Preference number: 4 (lower is better)
Translates to: TFQTYAPSGRRKILRRFLGTKIS*HSSVKN
Trigger: ATTTTTGACAGAGCTGTGGCAGCTTATCTTCGTGCC...AAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTATTAGGTTCTCCTACTaGTGGAAAACGCAACAGCCA +
Preference number: 4 (lower is better)
Translates to: TFQTYAPSGRRKILRRFLIRFSY*WKTQQP
Trigger: TGGCTGTTGCGTTTTCCAGCAGTAGGAGAACCTAAT...AAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp CCATCTTTTGTGTCTCTCCCTACCATGCAGGAAGCAAGTCTGGCTGTGCTATTCGGGCTAGATATTCTTTaGTTCCAGACTTTGCCACGA +
Preference number: 4 (lower is better)
Translates to: PSFVSLPTMQEASLAVLFGLDIL*FQTLPR
Trigger: TCGTGGCAAAGTCTGGAAGCAAAGAATATCTAGCCC...GAATAGCACAGCCAGACTTGCTTCCTGCATGGTAGGGAGAGACACAAAAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp GACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTCCAGCCTTCGACACTaGAAGTGTATAGATGAAAGT +
Preference number: 4 (lower is better)
Translates to: DLPDLCTIWSPQNSTEIPSSLRH*KCIDES
Trigger: ACTTTCATCTATACACTTCCAGTGTCGAAGGCTGGA...AGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp AAGCCTGTTACAATAAGCAAAGCTTCAACCAGAGCGGCTACTTTTCGTGCCAGGACACTAACCATCCCATaGAAGACCAAGGGAGATCAG +
Preference number: 4 (lower is better)
Translates to: KPVTISKASTRAATFRARTLTIP*KTKGDQ
Trigger: CTGATCTCCCTTGGTCTTCCATGGGATGGTTAGTGT...CCTGGCACGAAAAGTAGCCGCTCTGGTTGAAGCTTTGCTTATTGTAACAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp ACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAAGTCCAGAAGACAGTTATGCCAGAGTGCTAAAGTaGGCAGATCTGTCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: TTEAESVQTSRPSPEDSYARVLK*ADLSSL
Trigger: AAGGCTGGACAGATCTGCTCACTTTAGCACTCTGGC...ATAACTGTCTTCTGGACTTGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp CCATCTTTTGTGTCTCTCCCTACCATGCAGGAAGCAAGTCTGGCTGTGCTATTCCCCTCGACCCTTTGTTaGGATCCCATAATTTTATTC +
Preference number: 4 (lower is better)
Translates to: PSFVSLPTMQEASLAVLFPSTLC*DPIILF
Trigger: GAATAAAATTATGGGATCTCAACAAAGGGTCGAGGG...GAATAGCACAGCCAGACTTGCTTCCTGCATGGTAGGGAGAGACACAAAAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp CTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGTGGAAAAGCAGTAAGGTCACAGCCTTaGGGGCATTGGAAGTATATT +
Preference number: 4 (lower is better)
Translates to: LCTIWSPQNSTEIPCGKAVRSQP*GHWKYI
Trigger: AATATACTTCCAATGCCCTCAAGGCTGTGACCTTAC...TGCTTTTCCACAAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp CCATCTTTTGTGTCTCTCCCTACCATGCAGGAAGCAAGTCTGGCTGTGCTATTCTGCTTTCAAATAACATaGCTTGGCTTCTTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: PSFVSLPTMQEASLAVLFCFQIT*LGFFQA
Trigger: CGCTTGGAAGAAGCCAAGGCATGTTATTTGAAAGCA...GAATAGCACAGCCAGACTTGCTTCCTGCATGGTAGGGAGAGACACAAAAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp CTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGTGGAAAAGCAGAAATGATTGGCTTCTaGCATCACCTTCACTCGGAA +
Preference number: 4 (lower is better)
Translates to: LCTIWSPQNSTEIPCGKAEMIGF*HHLHSE
Trigger: TTCCGAGTGAAGGTGATGGCAGAAGCCAATCATTTC...TGCTTTTCCACAAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp CTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGTGGAAAAGCATTCCATCCTGATGGATaGGATCAGCTGCTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LCTIWSPQNSTEIPCGKAFHPDG*DQLLFH
Trigger: ATGGAAAAGCAGCTGATCGCATCCATCAGGATGGAA...TGCTTTTCCACAAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp AAGCCTGTTACAATAAGCAAAGCTTCAACCAGAGCGGCTACTTTTCGTGCCAGGAACCTCCTCTCCAGTTaGAGCCTTATTGTTGATCTG +
Preference number: 4 (lower is better)
Translates to: KPVTISKASTRAATFRARNLLSS*SLIVDL
Trigger: CAGATCAACAATAAGGCTGCAACTGGAGAGGAGGTT...CCTGGCACGAAAAGTAGCCGCTCTGGTTGAAGCTTTGCTTATTGTAACAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp AAGCCTGTTACAATAAGCAAAGCTTCAACCAGAGCGGCTACTTTTCGTGCCAGGTGCGGTAAGAAGCTATaGCTTCTGGAATATTCCCTG +
Preference number: 4 (lower is better)
Translates to: KPVTISKASTRAATFRARCGKKL*LLEYSL
Trigger: CAGGGAATATTCCAGAAGCCATAGCTTCTTACCGCA...CCTGGCACGAAAAGTAGCCGCTCTGGTTGAAGCTTTGCTTATTGTAACAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp CTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGTGGAAAAGCAACAGGCTTAATCATGTaGTCAGGTTTGTTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LCTIWSPQNSTEIPCGKATGLIM*SGLLPA
Trigger: AGCTGGCAACAAACCTGACCACATGATTAAGCCTGT...TGCTTTTCCACAAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp CCATCTTTTGTGTCTCTCCCTACCATGCAGGAAGCAAGTCTGGCTGTGCTATTCTTCTGGAATATTCCCTaGATCCTTATGAATGGAAGC +
Preference number: 4 (lower is better)
Translates to: PSFVSLPTMQEASLAVLFFWNIP*ILMNGS
Trigger: GCTTCCATTCATAAGGATTCAGGGAATATTCCAGAA...GAATAGCACAGCCAGACTTGCTTCCTGCATGGTAGGGAGAGACACAAAAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp CCATCTTTTGTGTCTCTCCCTACCATGCAGGAAGCAAGTCTGGCTGTGCTATTCCACCCTAGGATGTTTTaGATCAGGCTTGATTTTGTT +
Preference number: 4 (lower is better)
Translates to: PSFVSLPTMQEASLAVLFHPRMF*IRLDFV
Trigger: AACAAAATCAAGCCTGATTCAAAACATCCTAGGGTG...GAATAGCACAGCCAGACTTGCTTCCTGCATGGTAGGGAGAGACACAAAAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp CTACGGAGATTCCTTGTGGAAAAGCAGTTTCCCATCTTTTGTGTCTCTCCCTACATTACTCCAAGCTACTaGAAAGTTCGGTTGCGTCTC +
Preference number: 4 (lower is better)
Translates to: LRRFLVEKQFPIFCVSPYITPSY*KVRLRL
Trigger: GAGACGCAACCGAACTTTGCAGTAGCTTGGAGTAAT...GTAGGGAGAGACACAAAAGATGGGAAACTGCTTTTCCACAAGGAATCTCCGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp CTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGTGGAAAAGCAACGCTTCAGAATGTTTaGCCACATCTGCAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: LCTIWSPQNSTEIPCGKATLQNV*PHLQSR
Trigger: TCTACTTTGCAGATGTGGGCAAACATTCTGAAGCGT...TGCTTTTCCACAAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAAGTCCAGAAGACAGTTATAGTGAGCTGGGATGCTaGAACTCGAGAAGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: TTEAESVQTSRPSPEDSYSELGC*NSRSKS
Trigger: ACTCTTGCTTCTCGAGTTGCAGCATCCCAGCTCACT...ATAACTGTCTTCTGGACTTGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp AAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGAGTTCAGAAACTAAAACATGTCTCTCCCTACCATaGAGGAAGCAAGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KTTPAKSLSICQSSETKTCLSLP*RKQVWL
Trigger: CAGCCAGACTTGCTTCCTGCATGGTAGGGAGAGACA...TGTTTTAGTTTCTGAACTCTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp ATATCACCCATCTGCAACAAGGTACTGTACAGACAAGTAAGAAGTATGTTATCTACGGAAGACGCCATCTaGAGCTTCTCGAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ISPICNKVLYRQVRSMLSTEDAI*SFSRES
Trigger: GCTCTCCCTCGAGAAGCTCCAGATGGCGTCTTCCGT...AGATAACATACTTCTTACTTGTCTGTACAGTACCTTGTTGCAGATGGGTGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp CTACGGAGATTCCTTGTGGAAAAGCAGTTTCCCATCTTTTGTGTCTCTCCCTACTCAAATAACATGCCTTaGCTTCTTCCAAGCGACCCA +
Preference number: 4 (lower is better)
Translates to: LRRFLVEKQFPIFCVSPYSNNMP*LLPSDP
Trigger: TGGGTCGCTTGGAAGAAGCCAAGGCATGTTATTTGA...GTAGGGAGAGACACAAAAGATGGGAAACTGCTTTTCCACAAGGAATCTCCGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp ACAGCAGTGCAGTTCGCTACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAAGTTACAGTATACGATaGCATCTTCTGGTAACCCGT +
Preference number: 4 (lower is better)
Translates to: TAVQFATTEAESVQTSRPSYSIR*HLLVTR
Trigger: ACGGGTTACCAGAAGATGCCATCGTATACTGTAACT...TGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGTAGCGAACTGCACTGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp CTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGTGGAAAAGCATATCAAGAAATGCTTTaGGGTCGATGCCATTCAGAA +
Preference number: 4 (lower is better)
Translates to: LCTIWSPQNSTEIPCGKAYQEML*GRCHSE
Trigger: TTCTGAATGGCATCGACCTCAAAGCATTTCTTGATA...TGCTTTTCCACAAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp CTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGTGGAAAAGCAAGGGTAAAACACTGGTaGAACAGGTCAAAATTAGGA +
Preference number: 4 (lower is better)
Translates to: LCTIWSPQNSTEIPCGKARVKHW*NRSKLG
Trigger: TCCTAATTTTGACCTGTTTCACCAGTGTTTTACCCT...TGCTTTTCCACAAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ATATCACCCATCTGCAACAAGGTACTGTACAGACAAGTAAGAAGTATGTTATCTGTTTCGTTGGTTCTGTaGTGTCGGCCACGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: ISPICNKVLYRQVRSMLSVSLVL*CRPRCP
Trigger: TGGGCAACGTGGCCGACAGCACAGAACCAACGAAAC...AGATAACATACTTCTTACTTGTCTGTACAGTACCTTGTTGCAGATGGGTGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp GTTTATAAAACCTATAAAAAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGGTCTCCAGAGCTGCATaGAGTGTCTCTCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: VYKTYKKTTPAKSLSICQVSRAA*SVSQLP
Trigger: AGGCAGCTGAGAGACACTGCATGCAGCTCTGGAGAC...CTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp CTACGGAGATTCCTTGTGGAAAAGCAGTTTCCCATCTTTTGTGTCTCTCCCTACATTCGAATAAGCTTCTaGCAGAAGGGGGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LRRFLVEKQFPIFCVSPYIRISF*QKGVLF
Trigger: AAACAGAACCCCCTTCTGGCAGAAGCTTATTCGAAT...GTAGGGAGAGACACAAAAGATGGGAAACTGCTTTTCCACAAGGAATCTCCGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp CTACGGAGATTCCTTGTGGAAAAGCAGTTTCCCATCTTTTGTGTCTCTCCCTACCAGCTCTGTCAAAAATaGGTGCCTCTTTCAAGACAT +
Preference number: 4 (lower is better)
Translates to: LRRFLVEKQFPIFCVSPYQLCQK*VPLSRH
Trigger: ATGTCTTGAAAGAGGCACGCATTTTTGACAGAGCTG...GTAGGGAGAGACACAAAAGATGGGAAACTGCTTTTCCACAAGGAATCTCCGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp AAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGAGTTCAGAAACTAAAACAGTTGCCGTGCACCACTaGGTGATTTGGACTCAAACT +
Preference number: 4 (lower is better)
Translates to: KTTPAKSLSICQSSETKTVAVHH*VIWTQT
Trigger: AGTTTGAGTCCAAATCACGCAGTGGTGCACGGCAAC...TGTTTTAGTTTCTGAACTCTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTATTATAACAATCTTCTaGTTCAGCAACACTGCCCTT +
Preference number: 4 (lower is better)
Translates to: TFQTYAPSGRRKILRRFLIITIF*FSNTAL
Trigger: AAGGGCAGTGTTGCTGAAGCAGAAGATTGTTATAAT...AAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp CTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGTGGAAAAGCAAGTTTTCCCTGCTGCTaGAGTACACTTGCTAAATTT +
Preference number: 4 (lower is better)
Translates to: LCTIWSPQNSTEIPCGKASFPCC*STLAKF
Trigger: AAATTTAGCAAGTGTACTGCAGCAGCAGGGAAAACT...TGCTTTTCCACAAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp AAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGAGTTCAGAAACTAAAACATCCTGCAGTTTTCCCTaGTGCTGCAGTACACTTGCT +
Preference number: 4 (lower is better)
Translates to: KTTPAKSLSICQSSETKTSCSFP*CCSTLA
Trigger: AGCAAGTGTACTGCAGCAGCAGGGAAAACTGCAGGA...TGTTTTAGTTTCTGAACTCTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp AAGCCTGTTACAATAAGCAAAGCTTCAACCAGAGCGGCTACTTTTCGTGCCAGGATGTGCATCTGCAAATaGAGGATTAATTTGGATGGC +
Preference number: 4 (lower is better)
Translates to: KPVTISKASTRAATFRARMCICK*RINLDG
Trigger: GCCATCCAAATTAATCCTGCATTTGCAGATGCACAT...CCTGGCACGAAAAGTAGCCGCTCTGGTTGAAGCTTTGCTTATTGTAACAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp GTTTATAAAACCTATAAAAAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGTCACTCGGAAGTTTGTaGCATCGTCTGGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: VYKTYKKTTPAKSLSICQSLGSL*HRLGSG
Trigger: CCCTGAGCCCAGACGATGGCACAAACTTCCGAGTGA...CTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ACAGCAGTGCAGTTCGCTACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAGTTGATCTGAGTAGTTaGCAGTCCATTGCTAATACT +
Preference number: 4 (lower is better)
Translates to: TAVQFATTEAESVQTSRPVDLSS*QSIANT
Trigger: AGTATTAGCAATGGACTGGCAACTACTCAGATCAAC...TGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGTAGCGAACTGCACTGCTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAAGTCCAGAAGACAGTTATCAAACCAAACAGCAGTaGAGTTCGCTACTACTGAGG +
Preference number: 4 (lower is better)
Translates to: TTEAESVQTSRPSPEDSYQTKQQ*SSLLLR
Trigger: CCTCAGTAGTAGCGAACTGCACTGCTGTTTGGTTTG...ATAACTGTCTTCTGGACTTGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp AAGCCTGTTACAATAAGCAAAGCTTCAACCAGAGCGGCTACTTTTCGTGCCAGGGTTTATCTGCAACCATaGTGGCAACCTTTAACTGAT +
Preference number: 4 (lower is better)
Translates to: KPVTISKASTRAATFRARVYLQP*WQPLTD
Trigger: ATCAGTTAAAGGTTGCCAGCATGGTTGCAGATAAAC...CCTGGCACGAAAAGTAGCCGCTCTGGTTGAAGCTTTGCTTATTGTAACAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp CTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGTGGAAAAGCAAAACATCAGTTTATCTaGAACCATGCTGGCAACCTT +
Preference number: 4 (lower is better)
Translates to: LCTIWSPQNSTEIPCGKAKHQFI*NHAGNL
Trigger: AAGGTTGCCAGCATGGTTGCAGATAAACTGATGTTT...TGCTTTTCCACAAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp CCATCTTTTGTGTCTCTCCCTACCATGCAGGAAGCAAGTCTGGCTGTGCTATTCTATCTGCAACCATGCTaGCAACCTTTAACTGATATT +
Preference number: 4 (lower is better)
Translates to: PSFVSLPTMQEASLAVLFYLQPC*QPLTDI
Trigger: AATATCAGTTAAAGGTTGCCAGCATGGTTGCAGATA...GAATAGCACAGCCAGACTTGCTTCCTGCATGGTAGGGAGAGACACAAAAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp CTACGGAGATTCCTTGTGGAAAAGCAGTTTCCCATCTTTTGTGTCTCTCCCTACTTTAGGAGCAACAGGTaGAAAAATGATACGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LRRFLVEKQFPIFCVSPYFRSNR*KNDTVL
Trigger: CAGAACCGTATCATTTTTTCACCTGTTGCTCCTAAA...GTAGGGAGAGACACAAAAGATGGGAAACTGCTTTTCCACAAGGAATCTCCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp GTTTATAAAACCTATAAAAAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGGACAACCTAAGCAAGTaGGCTGGGATGCTGCAACTC +
Preference number: 4 (lower is better)
Translates to: VYKTYKKTTPAKSLSICQDNLSK*AGMLQL
Trigger: GAGTTGCAGCATCCCAGCTCACTTGCTTAGGTTGTC...CTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp ACAGCAGTGCAGTTCGCTACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAAAAAATCCAGAAGACTaGATCAATCCATGGAATCAC +
Preference number: 4 (lower is better)
Translates to: TAVQFATTEAESVQTSRPKNPED*INPWNH
Trigger: GTGATTCCATGGATTGATTCAGTCTTCTGGATTTTT...TGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGTAGCGAACTGCACTGCTGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp AAGCCTGTTACAATAAGCAAAGCTTCAACCAGAGCGGCTACTTTTCGTGCCAGGCTATATTATTATCAATaGCAGTACCACAACTGTGCC +
Preference number: 4 (lower is better)
Translates to: KPVTISKASTRAATFRARLYYYQ*QYHNCA
Trigger: GGCACAGTTGTGGTACTGTCATTGATAATAATATAG...CCTGGCACGAAAAGTAGCCGCTCTGGTTGAAGCTTTGCTTATTGTAACAGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp AAGCCTGTTACAATAAGCAAAGCTTCAACCAGAGCGGCTACTTTTCGTGCCAGGGTTCAGAATTACCTTTaGGACTCCTTGCTCAAAATT +
Preference number: 4 (lower is better)
Translates to: KPVTISKASTRAATFRARVQNYL*DSLLKI
Trigger: AATTTTGAGCAAGGAGTCTCAAAGGTAATTCTGAAC...CCTGGCACGAAAAGTAGCCGCTCTGGTTGAAGCTTTGCTTATTGTAACAGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ATATCACCCATCTGCAACAAGGTACTGTACAGACAAGTAAGAAGTATGTTATCTAGAGGTAATTGGTCCTaGTGCCGCCACTACCAGCAA +
Preference number: 4 (lower is better)
Translates to: ISPICNKVLYRQVRSMLSRGNWS*CRHYQQ
Trigger: TTGCTGGTAGTGGCGGCAGCAGGACCAATTACCTCT...AGATAACATACTTCTTACTTGTCTGTACAGTACCTTGTTGCAGATGGGTGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ACAGCAGTGCAGTTCGCTACTACTGAGGCTGAATCTGTACAGACTTCAAGACCATTCAAAGTGATGAATTaGAAGCCAAATTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: TAVQFATTEAESVQTSRPFKVMN*KPNFPL
Trigger: CAAGGGGAAATTTGGCTTGCAATTCATCACTTTGAA...TGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGTAGCGAACTGCACTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp GTTTATAAAACCTATAAAAAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGATACACAAGCCAGGTTaGCGTGCACCACTGCGTGAT +
Preference number: 4 (lower is better)
Translates to: VYKTYKKTTPAKSLSICQIHKPG*RAPLRD
Trigger: ATCACGCAGTGGTGCACGGCAACCTGGCTTGTGTAT...CTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAAGTCCAGAAGACAGTTATAATTTCTCGGAATACTaGTCAGCAACTTCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: TTEAESVQTSRPSPEDSYNFSEY*SATSAG
Trigger: GCCAGCTGAAGTTGCTGAGCAGTATTCCGAGAAATT...ATAACTGTCTTCTGGACTTGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ATATCACCCATCTGCAACAAGGTACTGTACAGACAAGTAAGAAGTATGTTATCTTCCATCCCTGTGGTGTaGCCATTACAGAGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: ISPICNKVLYRQVRSMLSSIPVV*PLQSGV
Trigger: CACTCCACTCTGTAATGGGCACACCACAGGGATGGA...AGATAACATACTTCTTACTTGTCTGTACAGTACCTTGTTGCAGATGGGTGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ATATCACCCATCTGCAACAAGGTACTGTACAGACAAGTAAGAAGTATGTTATCTGCAAGTGAGCTGGGATaGTGCAACTCGAGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: ISPICNKVLYRQVRSMLSASELG*CNSRSK
Trigger: CTTGCTTCTCGAGTTGCAGCATCCCAGCTCACTTGC...AGATAACATACTTCTTACTTGTCTGTACAGTACCTTGTTGCAGATGGGTGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAAGTCCAGAAGACAGTTATCATTCAGGCATCAGCTaGAACTACAGAATAGGTGCA +
Preference number: 4 (lower is better)
Translates to: TTEAESVQTSRPSPEDSYHSGIS*NYRIGA
Trigger: TGCACCTATTCTGTAGTTGCAGCTGATGCCTGAATG...ATAACTGTCTTCTGGACTTGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp AAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGAGTTCAGAAACTAAAACAAGCGGCTACTTTTCGTaGCAGGAAAAAGTTCATCCC +
Preference number: 4 (lower is better)
Translates to: KTTPAKSLSICQSSETKTSGYFS*QEKVHP
Trigger: GGGATGAACTTTTTCCTGGCACGAAAAGTAGCCGCT...TGTTTTAGTTTCTGAACTCTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp ACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAAGTCCAGAAGACAGTTATAGGATTGTGCATGCCTaGAATAGACTGCATAAGGTG +
Preference number: 4 (lower is better)
Translates to: TTEAESVQTSRPSPEDSYRIVHA*NRLHKV
Trigger: CACCTTATGCAGTCTATTCCAGGCATGCACAATCCT...ATAACTGTCTTCTGGACTTGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp GTTTATAAAACCTATAAAAAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGGGACATCCATCCCTGTaGTGTGCCCATTACAGAGTG +
Preference number: 4 (lower is better)
Translates to: VYKTYKKTTPAKSLSICQGHPSL*CAHYRV
Trigger: CACTCTGTAATGGGCACACCACAGGGATGGATGTCC...CTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp GTTTATAAAACCTATAAAAAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGAGCAAGAGTCTCTCCTaGCATAGTCACCATGGGGGT +
Preference number: 4 (lower is better)
Translates to: VYKTYKKTTPAKSLSICQSKSLS*HSHHGG
Trigger: ACCCCCATGGTGACTATGCCAGGAGAGACTCTTGCT...CTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp AAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGAGTTCAGAAACTAAAACAAGTTTGGGTCAAGGGTaGCAGCCTTTTCAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: KTTPAKSLSICQSSETKTSLGQG*QPFQSD
Trigger: ATCACTTTGAAAAGGCTGTCACCCTTGACCCAAACT...TGTTTTAGTTTCTGAACTCTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp TGTTCATTAACATGTAATTCTGGTTCAGAATTACCTTTGAGACTCCTTGCTCAACACTGCCCTTCTCTTTaGGAGCATTGGCTAGGTTGC +
Preference number: 4 (lower is better)
Translates to: CSLTCNSGSELPLRLLAQHCPSL*EHWLGC
Trigger: GCAACCTAGCCAATGCTCTCAAAGAGAAGGGCAGTG...TTGAGCAAGGAGTCTCAAAGGTAATTCTGAACCAGAATTACATGTTAATGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp TGTTCATTAACATGTAATTCTGGTTCAGAATTACCTTTGAGACTCCTTGCTCAACACTGCAAGGCTCCCTaGACATCCTGCATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: CSLTCNSGSELPLRLLAQHCKAP*TSCISF
Trigger: AAAGGAGATGCAGGATGTTCAGGGAGCCTTGCAGTG...TTGAGCAAGGAGTCTCAAAGGTAATTCTGAACCAGAATTACATGTTAATGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp ACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAAGTCCAGAAGACAGTTATGAAAGATCAATGAAATaGTTGGCTTCTGCCATCACC +
Preference number: 4 (lower is better)
Translates to: TTEAESVQTSRPSPEDSYERSMK*LASAIT
Trigger: GGTGATGGCAGAAGCCAATCATTTCATTGATCTTTC...ATAACTGTCTTCTGGACTTGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp TGTTCATTAACATGTAATTCTGGTTCAGAATTACCTTTGAGACTCCTTGCTCAAGCAGTGTCTCTCAGCTaGCTCAAAATCTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: CSLTCNSGSELPLRLLAQAVSLS*LKISCL
Trigger: CAGGCAGGAGATTTTGAGGCAGCTGAGAGACACTGC...TTGAGCAAGGAGTCTCAAAGGTAATTCTGAACCAGAATTACATGTTAATGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAAGTCCAGAAGACAGTTATAGCCAGATTGCTATGTaGATCTGCAAATGCAGGATT +
Preference number: 4 (lower is better)
Translates to: TTEAESVQTSRPSPEDSYSQIAM*ICKCRI
Trigger: AATCCTGCATTTGCAGATGCACATAGCAATCTGGCT...ATAACTGTCTTCTGGACTTGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAAGTCCAGAAGACAGTTATATGGATGCGATCAGCTaGTTTTCCATTGCATGGAAT +
Preference number: 4 (lower is better)
Translates to: TTEAESVQTSRPSPEDSYMDAIS*FSIAWN
Trigger: ATTCCATGCAATGGAAAAGCAGCTGATCGCATCCAT...ATAACTGTCTTCTGGACTTGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ACAGCAGTGCAGTTCGCTACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAAAGCAAGTCTGGCTGTaGTATTCTATTACCATTATA +
Preference number: 4 (lower is better)
Translates to: TAVQFATTEAESVQTSRPKQVWL*YSITII
Trigger: TATAATGGTAATAGAATAGCACAGCCAGACTTGCTT...TGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGTAGCGAACTGCACTGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp ATATCACCCATCTGCAACAAGGTACTGTACAGACAAGTAAGAAGTATGTTATCTAAGCATACGTTTCGTTaGTTCTGTGCTGTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: ISPICNKVLYRQVRSMLSKHTFR*FCAVGH
Trigger: GTGGCCGACAGCACAGAACCAACGAAACGTATGCTT...AGATAACATACTTCTTACTTGTCTGTACAGTACCTTGTTGCAGATGGGTGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp GTTTATAAAACCTATAAAAAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGGTTTGTGCCATCGTCTaGGCTCAGGGCATAACAGAA +
Preference number: 4 (lower is better)
Translates to: VYKTYKKTTPAKSLSICQVCAIV*AQGITE
Trigger: TTCTGTTATGCCCTGAGCCCAGACGATGGCACAAAC...CTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp ACAGCAGTGCAGTTCGCTACTACTGAGGCTGAATCTGTACAGACTTCAAGACCATGCTTTTCCATTGCATaGAATCTGAGAAAGATCAAT +
Preference number: 4 (lower is better)
Translates to: TAVQFATTEAESVQTSRPCFSIA*NLRKIN
Trigger: ATTGATCTTTCTCAGATTCCATGCAATGGAAAAGCA...TGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGTAGCGAACTGCACTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp GTTTATAAAACCTATAAAAAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGTGCCTGAATAGGAGCTaGCCTGAGAGCAAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: VYKTYKKTTPAKSLSICQCLNRS*PESKKL
Trigger: GAGCTTTTTGCTCTCAGGCCAGCTCCTATTCAGGCA...CTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp ATATCACCCATCTGCAACAAGGTACTGTACAGACAAGTAAGAAGTATGTTATCTAGGTTCTCCTACTGCTaGAAAACGCAACAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: ISPICNKVLYRQVRSMLSRFSYC*KTQQPE
Trigger: CTCTGGCTGTTGCGTTTTCCAGCAGTAGGAGAACCT...AGATAACATACTTCTTACTTGTCTGTACAGTACCTTGTTGCAGATGGGTGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp AAGCCTGTTACAATAAGCAAAGCTTCAACCAGAGCGGCTACTTTTCGTGCCAGGCTAAAAATCTTCATTTaGCACCAGATGGTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: KPVTISKASTRAATFRARLKIFI*HQMVCL
Trigger: TAAACACACCATCTGGTGCCAAATGAAGATTTTTAG...CCTGGCACGAAAAGTAGCCGCTCTGGTTGAAGCTTTGCTTATTGTAACAGGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp GTTTATAAAACCTATAAAAAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGGGTCAGCCACAATACTaGCCAACTTCTTCATTCGCT +
Preference number: 4 (lower is better)
Translates to: VYKTYKKTTPAKSLSICQGQPQY*PTSSFA
Trigger: AGCGAATGAAGAAGTTGGTCAGTATTGTGGCTGACC...CTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp AAGTTCTTATTAATCAATAATTTGTCAGCTAGGATACATTCAGGCATCAGCTGCTGCTCAATTGCCTCCTaGAACTGCCCTCTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: KFLLINNLSARIHSGISCCSIAS*NCPLSL
Trigger: CAAGGAAAGAGGGCAGTTGCAGGAGGCAATTGAGCA...GCAGCTGATGCCTGAATGTATCCTAGCTGACAAATTATTGATTAATAAGAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ATATCACCCATCTGCAACAAGGTACTGTACAGACAAGTAAGAAGTATGTTATCTCCTGTAGGTGTCTATTaGCAGATCTATCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ISPICNKVLYRQVRSMLSPVGVY*QIYQAL
Trigger: CAAGGCCTGATAGATCTGGCAATAGACACCTACAGG...AGATAACATACTTCTTACTTGTCTGTACAGTACCTTGTTGCAGATGGGTGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp AAGTTCTTATTAATCAATAATTTGTCAGCTAGGATACATTCAGGCATCAGCTGCGTTATTCAGAGAGTCTaGATGGGTGGGACACAGACG +
Preference number: 4 (lower is better)
Translates to: KFLLINNLSARIHSGISCVIQRV*MGGTQT
Trigger: CGTCTGTGTCCCACCCATGCAGACTCTCTGAATAAC...GCAGCTGATGCCTGAATGTATCCTAGCTGACAAATTATTGATTAATAAGAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp AAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGAGTTCAGAAACTAAAACAGAATGGAAGCCAGATTaGTATGTGCATCTGCAAATG +
Preference number: 4 (lower is better)
Translates to: KTTPAKSLSICQSSETKTEWKPD*YVHLQM
Trigger: CATTTGCAGATGCACATAGCAATCTGGCTTCCATTC...TGTTTTAGTTTCTGAACTCTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp AAGTTCTTATTAATCAATAATTTGTCAGCTAGGATACATTCAGGCATCAGCTGCTGTGGTCAGGTTTGTTaGCAGCTGCATAATGCTCCC +
Preference number: 4 (lower is better)
Translates to: KFLLINNLSARIHSGISCCGQVC*QLHNAP
Trigger: GGGAGCATTATGCAGCTGGCAACAAACCTGACCACA...GCAGCTGATGCCTGAATGTATCCTAGCTGACAAATTATTGATTAATAAGAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp AAGTTCTTATTAATCAATAATTTGTCAGCTAGGATACATTCAGGCATCAGCTGCCAACTACAGAATAGGTaGACAGCCTCAGCGCTTTGG +
Preference number: 4 (lower is better)
Translates to: KFLLINNLSARIHSGISCQLQNR*TASALW
Trigger: CCAAAGCGCTGAGGCTGTGCACCTATTCTGTAGTTG...GCAGCTGATGCCTGAATGTATCCTAGCTGACAAATTATTGATTAATAAGAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp TGTTCATTAACATGTAATTCTGGTTCAGAATTACCTTTGAGACTCCTTGCTCAACACACCAGTATTGTCTaGCTCTTGTCTCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CSLTCNSGSELPLRLLAQHTSIV*LLSPEL
Trigger: CAGCTCTGGAGACAAGAGCCAGACAATACTGGTGTG...TTGAGCAAGGAGTCTCAAAGGTAATTCTGAACCAGAATTACATGTTAATGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp GTTTATAAAACCTATAAAAAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGAGCATCCAGAAAGTTTaGGTCAAGGGTGACAGCCTT +
Preference number: 4 (lower is better)
Translates to: VYKTYKKTTPAKSLSICQSIQKV*VKGDSL
Trigger: AAGGCTGTCACCCTTGACCCAAACTTTCTGGATGCT...CTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp GTTTATAAAACCTATAAAAAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGTCAAAATCTCCTGCCTaGTATTCTCGATGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: VYKTYKKTTPAKSLSICQSKSPA*YSRCAN
Trigger: GTTGGCACATCGAGAATATCAGGCAGGAGATTTTGA...CTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp AAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGAGTTCAGAAACTAAAACACAGGACACTTCATCTTaGCAATTTTCACATCTGGTA +
Preference number: 4 (lower is better)
Translates to: KTTPAKSLSICQSSETKTQDTSS*QFSHLV
Trigger: TACCAGATGTGAAAATTGTCAAGATGAAGTGTCCTG...TGTTTTAGTTTCTGAACTCTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp ACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAAGTCCAGAAGACAGTTATTTCACGGATATTCCGTaGTTTACACTGTTAAAAGGT +
Preference number: 4 (lower is better)
Translates to: TTEAESVQTSRPSPEDSYFTDIP*FTLLKG
Trigger: ACCTTTTAACAGTGTAAATCACGGAATATCCGTGAA...ATAACTGTCTTCTGGACTTGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp GTTTATAAAACCTATAAAAAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGGGGGTTCTGTTTAATTaGCAGAGTGCTAAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: VYKTYKKTTPAKSLSICQGVLFN*QSAKVS
Trigger: GCTCACTTTAGCACTCTGGCAATTAAACAGAACCCC...CTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp ATATCACCCATCTGCAACAAGGTACTGTACAGACAAGTAAGAAGTATGTTATCTTGCAGGAAGCAAGTCTaGCTGTGCTATTCTATTACC +
Preference number: 4 (lower is better)
Translates to: ISPICNKVLYRQVRSMLSCRKQV*LCYSIT
Trigger: GGTAATAGAATAGCACAGCCAGACTTGCTTCCTGCA...AGATAACATACTTCTTACTTGTCTGTACAGTACCTTGTTGCAGATGGGTGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp GTTTATAAAACCTATAAAAAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGTTCCCTGAATCCTTATaGATGGAAGCCAGATTGCTA +
Preference number: 4 (lower is better)
Translates to: VYKTYKKTTPAKSLSICQFPESL*MEARLL
Trigger: TAGCAATCTGGCTTCCATTCATAAGGATTCAGGGAA...CTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR TCA 90 bp TGTTCATTAACATGTAATTCTGGTTCAGAATTACCTTTGAGACTCCTTGCTCAAGCCTTCCTGAAGCCATaGGAAAGAGGATATAGCATA +
Preference number: 4 (lower is better)
Translates to: CSLTCNSGSELPLRLLAQAFLKP*ERGYSI
Trigger: TATGCTATATCCTCTTTCTCATGGCTTCAGGAAGGC...TTGAGCAAGGAGTCTCAAAGGTAATTCTGAACCAGAATTACATGTTAATGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp TGTTCATTAACATGTAATTCTGGTTCAGAATTACCTTTGAGACTCCTTGCTCAAGAGCATTGGCTAGGTTaGAGTAAGCATCAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: CSLTCNSGSELPLRLLAQEHWLG*SKHQGN
Trigger: ATTTCCCTGATGCTTACTGCAACCTAGCCAATGCTC...TTGAGCAAGGAGTCTCAAAGGTAATTCTGAACCAGAATTACATGTTAATGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp AAGTTCTTATTAATCAATAATTTGTCAGCTAGGATACATTCAGGCATCAGCTGCTGCAGTTTTCCCTGCTaGTGCAGTACACTTGCTAAA +
Preference number: 4 (lower is better)
Translates to: KFLLINNLSARIHSGISCCSFPC*CSTLAK
Trigger: TTTAGCAAGTGTACTGCAGCAGCAGGGAAAACTGCA...GCAGCTGATGCCTGAATGTATCCTAGCTGACAAATTATTGATTAATAAGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ATATCACCCATCTGCAACAAGGTACTGTACAGACAAGTAAGAAGTATGTTATCTTTTGCTTCCAGACTTTaGCACGAACTTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: ISPICNKVLYRQVRSMLSFASRL*HELSSG
Trigger: ACCTGAAGAAAGTTCGTGGCAAAGTCTGGAAGCAAA...AGATAACATACTTCTTACTTGTCTGTACAGTACCTTGTTGCAGATGGGTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp AAGTTCTTATTAATCAATAATTTGTCAGCTAGGATACATTCAGGCATCAGCTGCGCCAGAGTACACTATTaGGAACACGCTTCAGAATGT +
Preference number: 4 (lower is better)
Translates to: KFLLINNLSARIHSGISCARVHY*EHASEC
Trigger: ACATTCTGAAGCGTGTTCCCAATAGTGTACTCTGGC...GCAGCTGATGCCTGAATGTATCCTAGCTGACAAATTATTGATTAATAAGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp AAGTTCTTATTAATCAATAATTTGTCAGCTAGGATACATTCAGGCATCAGCTGCAAAATGATACGGTTCTaGGGCAGGCCCATGTTTTGT +
Preference number: 4 (lower is better)
Translates to: KFLLINNLSARIHSGISCKMIRF*GRPMFC
Trigger: ACAAAACATGGGCCTGCCCCAGAACCGTATCATTTT...GCAGCTGATGCCTGAATGTATCCTAGCTGACAAATTATTGATTAATAAGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp ATATCACCCATCTGCAACAAGGTACTGTACAGACAAGTAAGAAGTATGTTATCTTACGGAGATTCCTTGTaGAAAAGCAGTTTCCCATCT +
Preference number: 4 (lower is better)
Translates to: ISPICNKVLYRQVRSMLSYGDSL*KSSFPS
Trigger: AGATGGGAAACTGCTTTTCCACAAGGAATCTCCGTA...AGATAACATACTTCTTACTTGTCTGTACAGTACCTTGTTGCAGATGGGTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ATATCACCCATCTGCAACAAGGTACTGTACAGACAAGTAAGAAGTATGTTATCTACTGCAAAGTTCGGTTaGGTCTCAATTGCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: ISPICNKVLYRQVRSMLSTAKFG*VSIAFK
Trigger: TTTGAAAGCAATTGAGACGCAACCGAACTTTGCAGT...AGATAACATACTTCTTACTTGTCTGTACAGTACCTTGTTGCAGATGGGTGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp AAGTTCTTATTAATCAATAATTTGTCAGCTAGGATACATTCAGGCATCAGCTGCCCAAATTTCCCCTTGTaGATTGAAAACACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: KFLLINNLSARIHSGISCPNFPL*IENTAK
Trigger: CTTGGCTGTGTTTTCAATGCACAAGGGGAAATTTGG...GCAGCTGATGCCTGAATGTATCCTAGCTGACAAATTATTGATTAATAAGAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ATATCACCCATCTGCAACAAGGTACTGTACAGACAAGTAAGAAGTATGTTATCTAATTTATCAGGATTGTaGATGCCTGGAATAGACTGC +
Preference number: 4 (lower is better)
Translates to: ISPICNKVLYRQVRSMLSNLSGL*MPGIDC
Trigger: GCAGTCTATTCCAGGCATGCACAATCCTGATAAATT...AGATAACATACTTCTTACTTGTCTGTACAGTACCTTGTTGCAGATGGGTGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ATATCACCCATCTGCAACAAGGTACTGTACAGACAAGTAAGAAGTATGTTATCTATGTTTGCCCACATCTaGAAAGTAGAAGGGTCAATT +
Preference number: 4 (lower is better)
Translates to: ISPICNKVLYRQVRSMLSMFAHI*KVEGSI
Trigger: AATTGACCCTTCTACTTTGCAGATGTGGGCAAACAT...AGATAACATACTTCTTACTTGTCTGTACAGTACCTTGTTGCAGATGGGTGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ATATCACCCATCTGCAACAAGGTACTGTACAGACAAGTAAGAAGTATGTTATCTCAGGCCCATGTTTTGTaGATACTGTTGAATATTAGG +
Preference number: 4 (lower is better)
Translates to: ISPICNKVLYRQVRSMLSQAHVL*ILLNIR
Trigger: CCTAATATTCAACAGTATGCACAAAACATGGGCCTG...AGATAACATACTTCTTACTTGTCTGTACAGTACCTTGTTGCAGATGGGTGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CCA 90 bp TGTTCATTAACATGTAATTCTGGTTCAGAATTACCTTTGAGACTCCTTGCTCAAAACTCAGCTAACCCTTaGAAGGAAAGCATACGTTTC +
Preference number: 4 (lower is better)
Translates to: CSLTCNSGSELPLRLLAQNSANP*KESIRF
Trigger: GAAACGTATGCTTTCCTTCCAAGGGTTAGCTGAGTT...TTGAGCAAGGAGTCTCAAAGGTAATTCTGAACCAGAATTACATGTTAATGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp AAGTTCTTATTAATCAATAATTTGTCAGCTAGGATACATTCAGGCATCAGCTGCAGGTTTGAGACGCAATaGATGTCGATAATGCTCAAT +
Preference number: 4 (lower is better)
Translates to: KFLLINNLSARIHSGISCRFETQ*MSIMLN
Trigger: ATTGAGCATTATCGACATGCATTGCGTCTCAAACCT...GCAGCTGATGCCTGAATGTATCCTAGCTGACAAATTATTGATTAATAAGAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR GCA 90 bp ATATCACCCATCTGCAACAAGGTACTGTACAGACAAGTAAGAAGTATGTTATCTTATATATCACCCATCTaGAACAAGGTACTGTACAGA +
Preference number: 4 (lower is better)
Translates to: ISPICNKVLYRQVRSMLSYISPI*NKVLYR
Trigger: TCTGTACAGTACCTTGTTGCAGATGGGTGATATATA...AGATAACATACTTCTTACTTGTCTGTACAGTACCTTGTTGCAGATGGGTGATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS CCA 90 bp TGCAGCATAGGCTCGCTTGCGCCAAAACTAATGCGCTGCCACAGCTaGCTGCTCCTGCGCCTGCGCCACCAGAACCCAAGTGCAAACCAC +
Preference number: 5 (lower is better)
Translates to: CSIGSLAPKLMRCHS*LLLRLRHQNPSANH
Trigger: GTGGTTTGCACTTGGGTTCTGGTGGCGCAGGCGCAGGAGCAGCCAGCTGTGGCAGCGCATTAGTTTTGGCGCAAGCGAGCCTATGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS GCA 90 bp GTCACCATGGGGGTCCCTGCCCAGAGGACATCCATCCCTGTGGTGTaGCCATTACAGAGTGGAGTGTCCAAGCAGACATCAGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: VTMGVPAQRTSIPVV*PLQSGVSKQTSASW
Trigger: CCAGCTGGCTGATGTCTGCTTGGACACTCCACTCTGTAATGGGCACACCACAGGGATGGATGTCCTCTGGGCAGGGACCCCCATGGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000474633.1
ENST00000488174.5
CDS CCA 90 bp CCCTGCCCAGAGGACATCCATCCCTGTGGTGTGCCCATTACAGAGTaGAGTGTCCAAGCAGACATCAGCCAGCTGGCCTCTCCTGACGTG +
Preference number: 5 (lower is better)
Translates to: PCPEDIHPCGVPITE*SVQADISQLASPDV
Trigger: CACGTCAGGAGAGGCCAGCTGGCTGATGTCTGCTTGGACACTCCACTCTGTAATGGGCACACCACAGGGATGGATGTCCTCTGGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000474633.1
ENST00000488174.5
CDS GCA 90 bp TCCTTCTCTGACCAGCCAAAAGTGACCCTGCAGCATAGGCTCGCTTaGGCCAAAACTAATGCGCTGCCACAGCTGGCTGCTCCTGCGCCT +
Preference number: 5 (lower is better)
Translates to: SFSDQPKVTLQHRLA*AKTNALPQLAAPAP
Trigger: AGGCGCAGGAGCAGCCAGCTGTGGCAGCGCATTAGTTTTGGCGCAAGCGAGCCTATGCTGCAGGGTCACTTTTGGCTGGTCAGAGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS GCA 90 bp TCGAGAAGCAAGAGTCTCTCCTGGCATAGTCACCATGGGGGTCCCTaGCCAGAGGACATCCATCCCTGTGGTGTGCCCATTACAGAGTGG +
Preference number: 5 (lower is better)
Translates to: SRSKSLSWHSHHGGP*PEDIHPCGVPITEW
Trigger: CCACTCTGTAATGGGCACACCACAGGGATGGATGTCCTCTGGGCAGGGACCCCCATGGTGACTATGCCAGGAGAGACTCTTGCTTCTCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS GCA 90 bp CTGCCACAGCTGGCTGCTCCTGCGCCTGCGCCACCAGAACCCAAGTaGAAACCACCATGTTCAGTTCTGCCAACCAAAGACCAACCCTTA +
Preference number: 5 (lower is better)
Translates to: LPQLAAPAPAPPEPK*KPPCSVLPTKDQPL
Trigger: TAAGGGTTGGTCTTTGGTTGGCAGAACTGAACATGGTGGTTTGCACTTGGGTTCTGGTGGCGCAGGCGCAGGAGCAGCCAGCTGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS GCA 90 bp AGCCTTCTCCCTCCCTGGATGAAGCAGTCAAACAGACAGCTACTCTaGGCATACACTCCACGCATTAGCATGCGCGTGGGGCTCAGAGCA +
Preference number: 5 (lower is better)
Translates to: SLLPPWMKQSNRQLL*AYTPRISMRVGLRA
Trigger: TGCTCTGAGCCCCACGCGCATGCTAATGCGTGGAGTGTATGCGCAGAGTAGCTGTCTGTTTGACTGCTTCATCCAGGGAGGGAGAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS GCA 90 bp CAGGGGTTCATTCGCACGCAATGCGCATTAACGCTGCGCAGCCTTTaGGCTACTGCAGGGTCACAGCGCATCATCAGAAGAGCAGAATGC +
Preference number: 5 (lower is better)
Translates to: QGFIRTQCALTLRSL*ATAGSQRIIRRAEC
Trigger: GCATTCTGCTCTTCTGATGATGCGCTGTGACCCTGCAGTAGCGCAAAGGCTGCGCAGCGTTAATGCGCATTGCGTGCGAATGAACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS TCA 90 bp CAGAGCTGCATGCAGTGTCTCTCAGCTGCCTCAAAATCTCCTGCCTaGTATTCTCGATGTGCCAACTCAGCTAACCCTGTGCTGTCGGCC +
Preference number: 5 (lower is better)
Translates to: QSCMQCLSAASKSPA*YSRCANSANPVLSA
Trigger: GGCCGACAGCACAGGGTTAGCTGAGTTGGCACATCGAGAATATCAGGCAGGAGATTTTGAGGCAGCTGAGAGACACTGCATGCAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373701.7
ENST00000488174.5
CDS GCA 90 bp GTGATTTATCAGCAACTTACCTGGCATAGTCACCATGGGGGTCCCTaGCCAGAGGACATCCATCCCTGTGGTGTGCCCATTACAGAGTGG +
Preference number: 5 (lower is better)
Translates to: VIYQQLTWHSHHGGP*PEDIHPCGVPITEW
Trigger: CCACTCTGTAATGGGCACACCACAGGGATGGATGTCCTCTGGGCAGGGACCCCCATGGTGACTATGCCAGGTAAGTTGCTGATAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474633.1
CDS-3UTR CAA 90 bp CTACGGAGATTCCTTGTGGAAAAGCAGTTTCCCATCTTTTGTGTCTCTCCCTACGTGCTGTCGGCCACGTaGCCCACGGAAGACGCCATC +
Preference number: 5 (lower is better)
Translates to: LRRFLVEKQFPIFCVSPYVLSAT*PTEDAI
Trigger: GATGGCGTCTTCCGTGGGCAACGTGGCCGACAGCAC...GTAGGGAGAGACACAAAAGATGGGAAACTGCTTTTCCACAAGGAATCTCCGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp ACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTAAGCGACCCAGGGCTTaGAGCAGGTTCCCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: TFQTYAPSGRRKILRRFLKRPRA*SRFPRS
Trigger: TGACCTGGGGAACCTGCTCAAAGCCCTGGGTCGCTT...AAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS TCA 90 bp GAGGACAGTCTCAAGTCTTGGCTTCTTCCAAGCGACCCAGGGCTTTaGGCAGGTTCCCCAGGTCACTGCGAACACAGTACAAATCAGGAT +
Preference number: 5 (lower is better)
Translates to: EDSLKSWLLPSDPGL*AGSPGHCEHSTNQD
Trigger: ATCCTGATTTGTACTGTGTTCGCAGTGACCTGGGGAACCTGCTCAAAGCCCTGGGTCGCTTGGAAGAAGCCAAGACTTGAGACTGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498566.3
CDS GCA 90 bp AGTCAAACAGACAGCTACTCTGCGCATACACTCCACGCATTAGCATaGGCGTGGGGCTCAGAGCAACAGGTGGGAGTTTCAGAAGCATTC +
Preference number: 5 (lower is better)
Translates to: SQTDSYSAHTLHALA*AWGSEQQVGVSEAF
Trigger: GAATGCTTCTGAAACTCCCACCTGTTGCTCTGAGCCCCACGCGCATGCTAATGCGTGGAGTGTATGCGCAGAGTAGCTGTCTGTTTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS GCA 90 bp ATTACTCATCTAGTCAACCGTTCACAGGGGTTCATTCGCACGCAATaGGCATTAACGCTGCGCAGCCTTTGCGCTACTGCAGGGTCACAG +
Preference number: 5 (lower is better)
Translates to: ITHLVNRSQGFIRTQ*ALTLRSLCATAGSQ
Trigger: CTGTGACCCTGCAGTAGCGCAAAGGCTGCGCAGCGTTAATGCGCATTGCGTGCGAATGAACCCCTGTGAACGGTTGACTAGATGAGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS-3UTR CAA 90 bp GACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTCCTTCACTCGGAAGTTaGTGCCATCGTCTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: DLPDLCTIWSPQNSTEIPPSLGS*CHRLGS
Trigger: TGAGCCCAGACGATGGCACAAACTTCCGAGTGAAGG...AGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS CCA 90 bp GTGTGCCCATTACAGAGTGGAGTGTCCAAGCAGACATCAGCCAGCTaGCCTCTCCTGACGTGTTCCTCTTTAGGAGCAACAGGTGAAAAA +
Preference number: 5 (lower is better)
Translates to: VCPLQSGVSKQTSAS*PLLTCSSLGATGEK
Trigger: TTTTTCACCTGTTGCTCCTAAAGAGGAACACGTCAGGAGAGGCCAGCTGGCTGATGTCTGCTTGGACACTCCACTCTGTAATGGGCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000474633.1
ENST00000488174.5
CDS-3UTR CAA 90 bp GACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTGTCGATAATGCTCAATaGCCTCCTGCAACTGCCCTC +
Preference number: 5 (lower is better)
Translates to: DLPDLCTIWSPQNSTEIPVDNAQ*PPATAL
Trigger: GAGGGCAGTTGCAGGAGGCAATTGAGCATTATCGAC...AGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS TCA 90 bp CAGAGCTGCATGCAGTGTCTCTCAGCTGCCTCAAAATCTCCTGCCTaGTATTCTCGATGTGCCAACTCAGCTAACCCTTGGAAGGAAAGC +
Preference number: 5 (lower is better)
Translates to: QSCMQCLSAASKSPA*YSRCANSANPWKES
Trigger: GCTTTCCTTCCAAGGGTTAGCTGAGTTGGCACATCGAGAATATCAGGCAGGAGATTTTGAGGCAGCTGAGAGACACTGCATGCAGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373719.8
ENST00000444774.3
ENST00000472270.1
ENST00000498566.3
CDS TCA 90 bp TCTATCAAACACCTACCTTGGCTTCTTCCAAGCGACCCAGGGCTTTaGGCAGGTTCCCCAGGTCACTGCGAACACAGTACAAATCAGGAT +
Preference number: 5 (lower is better)
Translates to: SIKHLPWLLPSDPGL*AGSPGHCEHSTNQD
Trigger: ATCCTGATTTGTACTGTGTTCGCAGTGACCTGGGGAACCTGCTCAAAGCCCTGGGTCGCTTGGAAGAAGCCAAGGTAGGTGTTTGATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS GCA 90 bp ATTGTCTGGCTCTTGTCTCCAGAGCTGCATGCAGTGTCTCTCAGCTaGCTCAAAATCTCCTGCCTGATATTCTCGATGTGCCAACTCAGC +
Preference number: 5 (lower is better)
Translates to: IVWLLSPELHAVSLS*LKISCLIFSMCQLS
Trigger: GCTGAGTTGGCACATCGAGAATATCAGGCAGGAGATTTTGAGGCAGCTGAGAGACACTGCATGCAGCTCTGGAGACAAGAGCCAGACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000444774.3
ENST00000472270.1
ENST00000488174.5
ENST00000498566.3
CDS GCA 90 bp AGCTTGTACTGCCCCTTCCATGTCACCCGCTGCTACCAAGGCGGCTaGCAGGTTAATATAACCATCGATGAAATCAGGTTTGAGACGCAA +
Preference number: 5 (lower is better)
Translates to: SLYCPFHVTRCYQGG*QVNITIDEIRFETQ
Trigger: TTGCGTCTCAAACCTGATTTCATCGATGGTTATATTAACCTGGCAGCCGCCTTGGTAGCAGCGGGTGACATGGAAGGGGCAGTACAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000444774.3
ENST00000455587.3
ENST00000488174.5
ENST00000498566.3
CDS GCA 90 bp AAGAGCAGAGACGTAAGCTTGTACTGCCCCTTCCATGTCACCCGCTaGTACCAAGGCGGCTGCCAGGTTAATATAACCATCGATGAAATC +
Preference number: 5 (lower is better)
Translates to: KSRDVSLYCPFHVTR*YQGGCQVNITIDEI
Trigger: GATTTCATCGATGGTTATATTAACCTGGCAGCCGCCTTGGTAGCAGCGGGTGACATGGAAGGGGCAGTACAAGCTTACGTCTCTGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000444774.3
ENST00000455587.3
ENST00000488174.5
ENST00000498566.3
CDS GCA 90 bp AAAACTGGCAGCTGGGCATGTCACAAGTGGGCAAGAGAGCAGATGTaGGTTGGCGGCTCAGTTGAAACCCGGTACTGGAAAAATTTCAAG +
Preference number: 5 (lower is better)
Translates to: KTGSWACHKWAREQM*VGGSVETRYWKNFK
Trigger: CTTGAAATTTTTCCAGTACCGGGTTTCAACTGAGCCGCCAACGCACATCTGCTCTCTTGCCCACTTGTGACATGCCCAGCTGCCAGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472270.1
CDS TCA 90 bp CTTTCAAATAACATGCCTTGGCTTCTTCCAAGCGACCCAGGGCTTTaGGCAGGTTCCCCAGGTCACTGCGAACACAGTACAAATCAGGAT +
Preference number: 5 (lower is better)
Translates to: LSNNMPWLLPSDPGL*AGSPGHCEHSTNQD
Trigger: ATCCTGATTTGTACTGTGTTCGCAGTGACCTGGGGAACCTGCTCAAAGCCCTGGGTCGCTTGGAAGAAGCCAAGGCATGTTATTTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000455587.3
CDS TCA 90 bp AGGCAGGCGCAATGTCTCAGCCTAAACCGATCTCTAAAGCTGCAGTaGAGTGCAATTCATGTTAGCTGTCCGCTTGGTGGGGTGACAATT +
Preference number: 5 (lower is better)
Translates to: RQAQCLSLNRSLKLQ*SAIHVSCPLGGVTI
Trigger: AATTGTCACCCCACCAAGCGGACAGCTAACATGAATTGCACTTCACTGCAGCTTTAGAGATCGGTTTAGGCTGAGACATTGCGCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS GCA 90 bp TTGCCAGATCTATCAGGCCTTGCTCATAGTATACACAAGCCAGGTTaGCGTGCACCACTGCGTGATTTGGACTCAAACTTAGGGCACGAA +
Preference number: 5 (lower is better)
Translates to: LPDLSGLAHSIHKPG*RAPLRDLDSNLGHE
Trigger: TTCGTGCCCTAAGTTTGAGTCCAAATCACGCAGTGGTGCACGGCAACCTGGCTTGTGTATACTATGAGCAAGGCCTGATAGATCTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000459760.1
CDS-3UTR CAA 90 bp CCATCTTTTGTGTCTCTCCCTACCATGCAGGAAGCAAGTCTGGCTGTGCTATTCAAAGCATACGTTTCGTaGGTTCTGTGCTGTCGGCCA +
Preference number: 5 (lower is better)
Translates to: PSFVSLPTMQEASLAVLFKAYVS*VLCCRP
Trigger: TGGCCGACAGCACAGAACCAACGAAACGTATGCTTT...GAATAGCACAGCCAGACTTGCTTCCTGCATGGTAGGGAGAGACACAAAAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp ACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTAGTATTGTCTGGCTCTaGTCTCCAGAGCTGCATGCA +
Preference number: 5 (lower is better)
Translates to: TFQTYAPSGRRKILRRFLSIVWL*SPELHA
Trigger: TGCATGCAGCTCTGGAGACAAGAGCCAGACAATACT...AAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp AAGCCTGTTACAATAAGCAAAGCTTCAACCAGAGCGGCTACTTTTCGTGCCAGGAGCAGAGACGTAAGCTaGTACTGCCCCTTCCATGTC +
Preference number: 5 (lower is better)
Translates to: KPVTISKASTRAATFRARSRDVS*YCPFHV
Trigger: GACATGGAAGGGGCAGTACAAGCTTACGTCTCTGCT...CCTGGCACGAAAAGTAGCCGCTCTGGTTGAAGCTTTGCTTATTGTAACAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp ACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGCCTGTAGGTGTCTATaGCCAGATCTATCAGGCCTT +
Preference number: 5 (lower is better)
Translates to: TFQTYAPSGRRKILRRFLACRCL*PDLSGL
Trigger: AAGGCCTGATAGATCTGGCAATAGACACCTACAGGC...AAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp GACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTAGGGCTAGATATTCTTaGCTTCCAGACTTTGCCACG +
Preference number: 5 (lower is better)
Translates to: DLPDLCTIWSPQNSTEIPRARYS*LPDFAT
Trigger: CGTGGCAAAGTCTGGAAGCAAAGAATATCTAGCCCT...AGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS TCA 90 bp CCCAGATTTAGAACAGATATGCCAAAGCCTGGCCCTGCTCTATTCTaGGGCGATTCGTGCCGTCAGTTTTCCTCAGTTTCAAAGGACTGT +
Preference number: 5 (lower is better)
Translates to: PRFRTDMPKPGPALF*GDSCRQFSSVSKDC
Trigger: ACAGTCCTTTGAAACTGAGGAAAACTGACGGCACGAATCGCCTCAGAATAGAGCAGGGCCAGGCTTTGGCATATCTGTTCTAAATCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS GCA 90 bp CCCCAAATTCGAATAAGCTTCTGCCAGAAGGGGGTTCTGTTTAATTaGCAGAGTGCTAAAGTGAGCAGATCTGTCCAGCCTTCGACACTG +
Preference number: 5 (lower is better)
Translates to: PQIRISFCQKGVLFN*QSAKVSRSVQPSTL
Trigger: CAGTGTCGAAGGCTGGACAGATCTGCTCACTTTAGCACTCTGGCAATTAAACAGAACCCCCTTCTGGCAGAAGCTTATTCGAATTTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000444774.3
ENST00000488174.5
ENST00000498566.3
CDS GCA 90 bp CAAAATGTTCAGGTTCTTGCTTTACCCCCAGATTTAGAACAGATATaGCAAAGCCTGGCCCTGCTCTATTCTGAGGCGATTCGTGCCGTC +
Preference number: 5 (lower is better)
Translates to: QNVQVLALPPDLEQI*QSLALLYSEAIRAV
Trigger: GACGGCACGAATCGCCTCAGAATAGAGCAGGGCCAGGCTTTGGCATATCTGTTCTAAATCTGGGGGTAAAGCAAGAACCTGAACATTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS GCA 90 bp CAGTTACAAACCCGTTACCATATTTCTCATCATGTGACTTTTCGGTaGGTTCCTTGCTGGAAGAGGAGGAGGAGGTTGTGTGTCTGCCCT +
Preference number: 5 (lower is better)
Translates to: QLQTRYHISHHVTFR*VPCWKRRRRLCVCP
Trigger: AGGGCAGACACACAACCTCCTCCTCCTCTTCCAGCAAGGAACGCACCGAAAAGTCACATGATGAGAAATATGGTAACGGGTTTGTAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS-3UTR CAA 90 bp ACAGCAGTGCAGTTCGCTACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAGCAGTTTCCCATCTTTaGTGTCTCTCCCTACCATGC +
Preference number: 5 (lower is better)
Translates to: TAVQFATTEAESVQTSRPAVSHL*CLSLPC
Trigger: GCATGGTAGGGAGAGACACAAAAGATGGGAAACTGC...TGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGTAGCGAACTGCACTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS GCA 90 bp ATAAAAGCACACCAGTATTGTCTGGCTCTTGTCTCCAGAGCTGCATaGAGTGTCTCTCAGCTGCCTCAAAATCTCCTGCCTGATATTCTC +
Preference number: 5 (lower is better)
Translates to: IKAHQYCLALVSRAA*SVSQLPQNLLPDIL
Trigger: GAGAATATCAGGCAGGAGATTTTGAGGCAGCTGAGAGACACTGCATGCAGCTCTGGAGACAAGAGCCAGACAATACTGGTGTGCTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000444774.3
ENST00000472270.1
ENST00000488174.5
ENST00000498566.3
CDS CCA 90 bp ATTGGCTTCTGCCATCACCTTCACTCGGAAGTTTGTGCCATCGTCTaGGCTCAGGGCATAACAGAACACCTCAAATTTATCAGGATTGTG +
Preference number: 5 (lower is better)
Translates to: IGFCHHLHSEVCAIV*AQGITEHLKFIRIV
Trigger: CACAATCCTGATAAATTTGAGGTGTTCTGTTATGCCCTGAGCCCAGACGATGGCACAAACTTCCGAGTGAAGGTGATGGCAGAAGCCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS-3UTR CAA 90 bp CCATCTTTTGTGTCTCTCCCTACCATGCAGGAAGCAAGTCTGGCTGTGCTATTCTCGATGAAATCAGGTTaGAGACGCAATGCATGTCGA +
Preference number: 5 (lower is better)
Translates to: PSFVSLPTMQEASLAVLFSMKSG*RRNACR
Trigger: TCGACATGCATTGCGTCTCAAACCTGATTTCATCGA...GAATAGCACAGCCAGACTTGCTTCCTGCATGGTAGGGAGAGACACAAAAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp AAGCCTGTTACAATAAGCAAAGCTTCAACCAGAGCGGCTACTTTTCGTGCCAGGGCTGCTGCAGTACACTaGCTAAATTTGAATGGGCAG +
Preference number: 5 (lower is better)
Translates to: KPVTISKASTRAATFRARAAAVH*LNLNGQ
Trigger: CTGCCCATTCAAATTTAGCAAGTGTACTGCAGCAGC...CCTGGCACGAAAAGTAGCCGCTCTGGTTGAAGCTTTGCTTATTGTAACAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp ACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAAGTCCAGAAGACAGTTATCTTTCCCCCAGAAGGTaGAGGCTCAGGTATAGGGGT +
Preference number: 5 (lower is better)
Translates to: TTEAESVQTSRPSPEDSYLSPRR*RLRYRG
Trigger: ACCCCTATACCTGAGCCTCAACCTTCTGGGGGAAAG...ATAACTGTCTTCTGGACTTGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS GCA 90 bp CCCCAAATTCGAATAAGCTTCTGCCAGAAGGGGGTTCTGTTTAATTaGCAGAGTGCTAAAGTGAGCAGATCTGTAATCCCAGCTACTCAG +
Preference number: 5 (lower is better)
Translates to: PQIRISFCQKGVLFN*QSAKVSRSVIPATQ
Trigger: CTGAGTAGCTGGGATTACAGATCTGCTCACTTTAGCACTCTGGCAATTAAACAGAACCCCCTTCTGGCAGAAGCTTATTCGAATTTGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455587.3
CDS CCA 90 bp TGTCTGTTTTTAGCAATAAGCTCAAGACAACCTAAGCAAGTGAGCTaGGATGCTGCAACTCGAGAAGCAAGAGTCTCTCCTGGCATAGTC +
Preference number: 5 (lower is better)
Translates to: CLFLAISSRQPKQVS*DAATREARVSPGIV
Trigger: GACTATGCCAGGAGAGACTCTTGCTTCTCGAGTTGCAGCATCCCAGCTCACTTGCTTAGGTTGTCTTGAGCTTATTGCTAAAAACAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS CCA 90 bp AAACCACCATGTTCAGTTCTGCCAACCAAAGACCAACCCTTACACTaGGACTTAACTGGGAAGTCAGTTGCTATAAGGCTCTATGCTGGA +
Preference number: 5 (lower is better)
Translates to: KPPCSVLPTKDQPLH*DLTGKSVAIRLYAG
Trigger: TCCAGCATAGAGCCTTATAGCAACTGACTTCCCAGTTAAGTCCCAGTGTAAGGGTTGGTCTTTGGTTGGCAGAACTGAACATGGTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS-3UTR CAA 90 bp GACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTAAATGCAGGATTAATTaGGATGGCACGCGTATAACA +
Preference number: 5 (lower is better)
Translates to: DLPDLCTIWSPQNSTEIPKCRIN*DGTRIT
Trigger: TGTTATACGCGTGCCATCCAAATTAATCCTGCATTT...AGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp CTACGGAGATTCCTTGTGGAAAAGCAGTTTCCCATCTTTTGTGTCTCTCCCTACTTACTGCTATCTGCATaGTCTCCTCCATCAGGACAC +
Preference number: 5 (lower is better)
Translates to: LRRFLVEKQFPIFCVSPYLLLSA*SPPSGH
Trigger: GTGTCCTGATGGAGGAGACAATGCAGATAGCAGTAA...GTAGGGAGAGACACAAAAGATGGGAAACTGCTTTTCCACAAGGAATCTCCGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS TCA 90 bp TACGATACAAGCGAACTGCCTCTTCAATGTTTCCCTGTTCTCGTTTaGTATTGGCTAGGTTATTCAGAGAGTCTGCATGGGTGGGACACA +
Preference number: 5 (lower is better)
Translates to: YDTSELPLQCFPVLV*YWLGYSESLHGWDT
Trigger: TGTGTCCCACCCATGCAGACTCTCTGAATAACCTAGCCAATATCAAACGAGAACAGGGAAACATTGAAGAGGCAGTTCGCTTGTATCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000459760.1
ENST00000462638.1
ENST00000488174.5
CDS GCA 90 bp ACATATGGGAATGAGGACAGTCTCAAGTCTGTAATATGGGAAACATaGAGAAGGGAGAGGGTTAATCAGGGCTATTGCATACAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: TYGNEDSLKSVIWET*RRERVNQGYCIQQG
Trigger: TCCCTGCTGTATGCAATAGCCCTGATTAACCCTCTCCCTTCTGCATGTTTCCCATATTACAGACTTGAGACTGTCCTCATTCCCATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CCA 90 bp ACGAGCAGGTACCCCAACATCTCCTACCTGTCCAGCCTTCGACACTaGAAGTGTATAGATGAAAGTAATAAAAGCACACCAGTATTGTCT +
Preference number: 5 (lower is better)
Translates to: TSRYPNISYLSSLRH*KCIDESNKSTPVLS
Trigger: AGACAATACTGGTGTGCTTTTATTACTTTCATCTATACACTTCCAGTGTCGAAGGCTGGACAGGTAGGAGATGTTGGGGTACCTGCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472270.1
CDS CCA 90 bp ACACTGGGACTTAACTGGGAAGTCAGTTGCTATAAGGCTCTATGCTaGAGTTCTCTTATCCAAACAACTACGGGCCCTTGTCATGTTTTC +
Preference number: 5 (lower is better)
Translates to: TLGLNWEVSCYKALC*SSLIQTTTGPCHVF
Trigger: GAAAACATGACAAGGGCCCGTAGTTGTTTGGATAAGAGAACTCCAGCATAGAGCCTTATAGCAACTGACTTCCCAGTTAAGTCCCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CCA 90 bp TTCAGTTCTGCCAACCAAAGACCAACCCTTACACTGGGACTTAACTaGGAAGTCAGTTGCTATAAGGCTCTATGCTGGAGTTCTCTTATC +
Preference number: 5 (lower is better)
Translates to: FSSANQRPTLTLGLN*EVSCYKALCWSSLI
Trigger: GATAAGAGAACTCCAGCATAGAGCCTTATAGCAACTGACTTCCCAGTTAAGTCCCAGTGTAAGGGTTGGTCTTTGGTTGGCAGAACTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS-3UTR CAA 90 bp AAGTTCTTATTAATCAATAATTTGTCAGCTAGGATACATTCAGGCATCAGCTGCAATGCTCTGGAGGGCTaGAGCGGCGGCAGCAGTTAC +
Preference number: 5 (lower is better)
Translates to: KFLLINNLSARIHSGISCNALEG*SGGSSY
Trigger: GTAACTGCTGCCGCCGCTCAAGCCCTCCAGAGCATT...GCAGCTGATGCCTGAATGTATCCTAGCTGACAAATTATTGATTAATAAGAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp ACAGCAGTGCAGTTCGCTACTACTGAGGCTGAATCTGTACAGACTTCAAGACCATACTGCAAAGTTCGGTaGCGTCTCAATTGCTTTCAA +
Preference number: 5 (lower is better)
Translates to: TAVQFATTEAESVQTSRPYCKVR*RLNCFQ
Trigger: TTGAAAGCAATTGAGACGCAACCGAACTTTGCAGTA...TGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGTAGCGAACTGCACTGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp ACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTATTTCCCCTTGTGCATaGAAAACACAGCCAAGATTA +
Preference number: 5 (lower is better)
Translates to: TFQTYAPSGRRKILRRFLISPCA*KTQPRL
Trigger: TAATCTTGGCTGTGTTTTCAATGCACAAGGGGAAAT...AAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp ACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGTAGTTGCCAGTCCATaGCTAATACTGAATCCATTA +
Preference number: 5 (lower is better)
Translates to: TFQTYAPSGRRKILRRFLVVASP*LILNPL
Trigger: TAATGGATTCAGTATTAGCAATGGACTGGCAACTAC...AAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp AAGCCTGTTACAATAAGCAAAGCTTCAACCAGAGCGGCTACTTTTCGTGCCAGGTCCATTGTGTATTGTTaGGTGTTGAACAGAGGGCTA +
Preference number: 5 (lower is better)
Translates to: KPVTISKASTRAATFRARSIVYC*VLNRGL
Trigger: TAGCCCTCTGTTCAACACCAAACAATACACAATGGA...CCTGGCACGAAAAGTAGCCGCTCTGGTTGAAGCTTTGCTTATTGTAACAGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp GACCTTCCAGACCTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTGACTATAAGTCTAATTaGTACTCCAAACCAAACAGC +
Preference number: 5 (lower is better)
Translates to: DLPDLCTIWSPQNSTEIPDYKSN*YSKPNS
Trigger: GCTGTTTGGTTTGGAGTACAAATTAGACTTATAGTC...AGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAGGTCTGGAAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp CTACGGAGATTCCTTGTGGAAAAGCAGTTTCCCATCTTTTGTGTCTCTCCCTACTGTAAGGTCACAGCCTaGAGGGCATTGGAAGTATAT +
Preference number: 5 (lower is better)
Translates to: LRRFLVEKQFPIFCVSPYCKVTA*RALEVY
Trigger: ATATACTTCCAATGCCCTCAAGGCTGTGACCTTACA...GTAGGGAGAGACACAAAAGATGGGAAACTGCTTTTCCACAAGGAATCTCCGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS TCA 90 bp TCCCAAAGTCGGAACTCACATATCCTACACGCAGCCGACCATCACTaGGCTTCAAGTCTTTTGGATGTTCATATGGTGGTTTATGAAGAA +
Preference number: 5 (lower is better)
Translates to: SQSRNSHILHAADHH*ASSLLDVHMVVYEE
Trigger: TTCTTCATAAACCACCATATGAACATCCAAAAGACTTGAAGCTCAGTGATGGTCGGCTGCGTGTAGGATATGTGAGTTCCGACTTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS GCA 90 bp TGCCAGGTTAATATAACCATCGATGAAATCAGGTTTGAGACGCAATaGATGTCGATAATGCTCAATTGCCTCCTGCAACTGCCCTCTTTC +
Preference number: 5 (lower is better)
Translates to: CQVNITIDEIRFETQ*MSIMLNCLLQLPSF
Trigger: GAAAGAGGGCAGTTGCAGGAGGCAATTGAGCATTATCGACATGCATTGCGTCTCAAACCTGATTTCATCGATGGTTATATTAACCTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000444774.3
ENST00000455587.3
ENST00000488174.5
ENST00000498566.3
CDS GCA 90 bp AACCAAAGACCAACCCTTACACTGGGACTTAACTGGGAAGTCAGTTaGTATAAGGCTCTATGCTGGAGTTCTCTTATCCAAACAACTACG +
Preference number: 5 (lower is better)
Translates to: NQRPTLTLGLNWEVS*YKALCWSSLIQTTT
Trigger: CGTAGTTGTTTGGATAAGAGAACTCCAGCATAGAGCCTTATAGCAACTGACTTCCCAGTTAAGTCCCAGTGTAAGGGTTGGTCTTTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS-3UTR CAA 90 bp CTATGCACCATCTGGTCGCCGCAAAATTCTACGGAGATTCCTTGTGGAAAAGCATCAGGACACTTCATCTaGACAATTTTCACATCTGGT +
Preference number: 5 (lower is better)
Translates to: LCTIWSPQNSTEIPCGKASGHFI*TIFTSG
Trigger: ACCAGATGTGAAAATTGTCAAGATGAAGTGTCCTGA...TGCTTTTCCACAAGGAATCTCCGTAGAATTTTGCGGCGACCAGATGGTGCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp ACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAAGTCCAGAAGACAGTTATAGCCAGAGTACACTATaGGGAACACGCTTCAGAATG +
Preference number: 5 (lower is better)
Translates to: TTEAESVQTSRPSPEDSYSQSTL*GTRFRM
Trigger: CATTCTGAAGCGTGTTCCCAATAGTGTACTCTGGCT...ATAACTGTCTTCTGGACTTGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp AAGCCTGTTACAATAAGCAAAGCTTCAACCAGAGCGGCTACTTTTCGTGCCAGGGTGTATTGTTTGGTGTaGAACAGAGGGCTAGATATT +
Preference number: 5 (lower is better)
Translates to: KPVTISKASTRAATFRARVYCLV*NRGLDI
Trigger: AATATCTAGCCCTCTGTTCAACACCAAACAATACAC...CCTGGCACGAAAAGTAGCCGCTCTGGTTGAAGCTTTGCTTATTGTAACAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp ACAGCAGTGCAGTTCGCTACTACTGAGGCTGAATCTGTACAGACTTCAAGACCACCTAAAAATCTTCATTaGGCACCAGATGGTGTGTTT +
Preference number: 5 (lower is better)
Translates to: TAVQFATTEAESVQTSRPPKNLH*APDGVF
Trigger: AAACACACCATCTGGTGCCAAATGAAGATTTTTAGG...TGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGTAGCGAACTGCACTGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp AAGCCTGTTACAATAAGCAAAGCTTCAACCAGAGCGGCTACTTTTCGTGCCAGGACCCTCGACCCTTTGTaGAGATCCCATAATTTTATT +
Preference number: 5 (lower is better)
Translates to: KPVTISKASTRAATFRARTLDPL*RSHNFI
Trigger: AATAAAATTATGGGATCTCAACAAAGGGTCGAGGGT...CCTGGCACGAAAAGTAGCCGCTCTGGTTGAAGCTTTGCTTATTGTAACAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp ACAGCAGTGCAGTTCGCTACTACTGAGGCTGAATCTGTACAGACTTCAAGACCATATTCATATGTTGGCTaGTTTAAGCCTCAAACCCTC +
Preference number: 5 (lower is better)
Translates to: TAVQFATTEAESVQTSRPYSYVG*FKPQTL
Trigger: GAGGGTTTGAGGCTTAAACAAGCCAACATATGAATA...TGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGTAGCGAACTGCACTGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS TCA 90 bp GGCTCAGGTATAGGGGTAATTCTCCTGTGCAGTCTTTATTTATGCTaGCTCAGTGACTTCAACAGGCTTAATCATGTGGTCAGGTTTGTT +
Preference number: 5 (lower is better)
Translates to: GSGIGVILLCSLYLC*LSDFNRLNHVVRFV
Trigger: AACAAACCTGACCACATGATTAAGCCTGTTGAAGTCACTGAGTCAGCATAAATAAAGACTGCACAGGAGAATTACCCCTATACCTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373719.8
ENST00000488174.5
CDS CCA 90 bp GGGCATATAAGCCAATTTCTCGGAATACTGCTCAGCAACTTCAGCTaGCGAAGTTTCCTGATCAGTGATAATATAATCCATGAAAAGCGC +
Preference number: 5 (lower is better)
Translates to: GHISQFLGILLSNFS*RSFLISDNIIHEKR
Trigger: GCGCTTTTCATGGATTATATTATCACTGATCAGGAAACTTCGCCAGCTGAAGTTGCTGAGCAGTATTCCGAGAAATTGGCTTATATGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS-3UTR CAA 90 bp AAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGAGTTCAGAAACTAAAACAAAAAGCACACCAGTATaGTCTGGCTCTTGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: KTTPAKSLSICQSSETKTKSTPV*SGSCLQ
Trigger: CTGGAGACAAGAGCCAGACAATACTGGTGTGCTTTT...TGTTTTAGTTTCTGAACTCTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp ACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAAGTCCAGAAGACAGTTATAACTGCCCTCTTTCCTaGTACACATTCCCCAAATTC +
Preference number: 5 (lower is better)
Translates to: TTEAESVQTSRPSPEDSYNCPLS*YTFPKF
Trigger: GAATTTGGGGAATGTGTACAAGGAAAGAGGGCAGTT...ATAACTGTCTTCTGGACTTGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp GTTTATAAAACCTATAAAAAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGGCACCACTGCGTGATTaGGACTCAAACTTAGGGCAC +
Preference number: 5 (lower is better)
Translates to: VYKTYKKTTPAKSLSICQAPLRD*DSNLGH
Trigger: GTGCCCTAAGTTTGAGTCCAAATCACGCAGTGGTGC...CTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS TCA 90 bp ATGTCACAAGTGGGCAAGAGAGCAGATGTGCGTTGGCGGCTCAGTTaGAACCCGGTACTGGAAAAATTTCAAGTTCAAATATTTAAGTAT +
Preference number: 5 (lower is better)
Translates to: MSQVGKRADVRWRLS*NPVLEKFQVQIFKY
Trigger: ATACTTAAATATTTGAACTTGAAATTTTTCCAGTACCGGGTTTCAACTGAGCCGCCAACGCACATCTGCTCTCTTGCCCACTTGTGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472270.1
CDS GCA 90 bp TTCCCCTTGTGCATTGAAAACACAGCCAAGATTACTCCAAGCTACTaGAAAGTTCGGTTGCGTCTCAATTGCTTTCAAATAACATGCCTT +
Preference number: 5 (lower is better)
Translates to: FPLCIENTAKITPSY*KVRLRLNCFQITCL
Trigger: AAGGCATGTTATTTGAAAGCAATTGAGACGCAACCGAACTTTGCAGTAGCTTGGAGTAATCTTGGCTGTGTTTTCAATGCACAAGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000455587.3
ENST00000488174.5
CDS CCA 90 bp GCCACAAGACAGAAGATTCAGGCATGGAGGCAAATTGTTTTGCTGTaGCAGTTACAAACCCGTTACCATATTTCTCATCATGTGACTTTT +
Preference number: 5 (lower is better)
Translates to: ATRQKIQAWRQIVLL*QLQTRYHISHHVTF
Trigger: AAAAGTCACATGATGAGAAATATGGTAACGGGTTTGTAACTGCCACAGCAAAACAATTTGCCTCCATGCCTGAATCTTCTGTCTTGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS-3UTR CAA 90 bp ACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAAGTCCAGAAGACAGTTATACCACAACTGTGCCCTaGATAATTAGTAATCACTCC +
Preference number: 5 (lower is better)
Translates to: TTEAESVQTSRPSPEDSYTTTVP*IISNHS
Trigger: GGAGTGATTACTAATTATCAAGGGCACAGTTGTGGT...ATAACTGTCTTCTGGACTTGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS CCA 90 bp ATGTCTATTACATATGGGAATGAGGACAGTCTCAAGTCTGTAATATaGGAAACATGCAGAAGGGAGAGGGTTAATCAGGGCTATTGCATA +
Preference number: 5 (lower is better)
Translates to: MSITYGNEDSLKSVI*ETCRRERVNQGYCI
Trigger: TATGCAATAGCCCTGATTAACCCTCTCCCTTCTGCATGTTTCCCATATTACAGACTTGAGACTGTCCTCATTCCCATATGTAATAGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS-3UTR CAA 90 bp AAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGAGTTCAGAAACTAAAACACAAACCCTCGACCCTTaGTTGAGATCCCATAATTTT +
Preference number: 5 (lower is better)
Translates to: KTTPAKSLSICQSSETKTQTLDP*LRSHNF
Trigger: AAAATTATGGGATCTCAACAAAGGGTCGAGGGTTTG...TGTTTTAGTTTCTGAACTCTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp ACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAAGTCCAGAAGACAGTTATGGTTCAGAATTACCTTaGAGACTCCTTGCTCAAAAT +
Preference number: 5 (lower is better)
Translates to: TTEAESVQTSRPSPEDSYGSELP*RLLAQN
Trigger: ATTTTGAGCAAGGAGTCTCAAAGGTAATTCTGAACC...ATAACTGTCTTCTGGACTTGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp TGTTCATTAACATGTAATTCTGGTTCAGAATTACCTTTGAGACTCCTTGCTCAACCAGCAAGAACGTATTaGGAGGTAGTAGTACAAGGG +
Preference number: 5 (lower is better)
Translates to: CSLTCNSGSELPLRLLAQPARTY*EVVVQG
Trigger: CCCTTGTACTACTACCTCCAAATACGTTCTTGCTGG...TTGAGCAAGGAGTCTCAAAGGTAATTCTGAACCAGAATTACATGTTAATGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp ACTACTGAGGCTGAATCTGTACAGACTTCAAGACCAAGTCCAGAAGACAGTTATTTTCAAAGTGATGAATaGCAAGCCAAATTTCCCCTT +
Preference number: 5 (lower is better)
Translates to: TTEAESVQTSRPSPEDSYFQSDE*QAKFPL
Trigger: AAGGGGAAATTTGGCTTGCAATTCATCACTTTGAAA...ATAACTGTCTTCTGGACTTGGTCTTGAAGTCTGTACAGATTCAGCCTCAGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp ATATCACCCATCTGCAACAAGGTACTGTACAGACAAGTAAGAAGTATGTTATCTCAGATCTATCAGGCCTaGCTCATAGTATACACAAGC +
Preference number: 5 (lower is better)
Translates to: ISPICNKVLYRQVRSMLSQIYQA*LIVYTS
Trigger: GCTTGTGTATACTATGAGCAAGGCCTGATAGATCTG...AGATAACATACTTCTTACTTGTCTGTACAGTACCTTGTTGCAGATGGGTGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp TGTTCATTAACATGTAATTCTGGTTCAGAATTACCTTTGAGACTCCTTGCTCAATTATCTAAGCACAGGTaGCCGTGCCTCTCAGCAATA +
Preference number: 5 (lower is better)
Translates to: CSLTCNSGSELPLRLLAQLSKHR*PCLSAI
Trigger: TATTGCTGAGAGGCACGGCAACCTGTGCTTAGATAA...TTGAGCAAGGAGTCTCAAAGGTAATTCTGAACCAGAATTACATGTTAATGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp AAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGAGTTCAGAAACTAAAACAGAATCAGGCTTGATTTaGTTAGTTGAGTTACAGGAG +
Preference number: 5 (lower is better)
Translates to: KTTPAKSLSICQSSETKTESGLI*LVELQE
Trigger: CTCCTGTAACTCAACTAACAAAATCAAGCCTGATTC...TGTTTTAGTTTCTGAACTCTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp GTTTATAAAACCTATAAAAAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGTCGGTTGCGTCTCAATaGCTTTCAAATAACATGCCT +
Preference number: 5 (lower is better)
Translates to: VYKTYKKTTPAKSLSICQSVASQ*LSNNMP
Trigger: AGGCATGTTATTTGAAAGCAATTGAGACGCAACCGA...CTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp TGTTCATTAACATGTAATTCTGGTTCAGAATTACCTTTGAGACTCCTTGCTCAAGGGCAGGCCCATGTTTaGTGCATACTGTTGAATATT +
Preference number: 5 (lower is better)
Translates to: CSLTCNSGSELPLRLLAQGQAHV*CILLNI
Trigger: AATATTCAACAGTATGCACAAAACATGGGCCTGCCC...TTGAGCAAGGAGTCTCAAAGGTAATTCTGAACCAGAATTACATGTTAATGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS GCA 90 bp TATAGCCATTCATATTTACAAGGATATGAATTCCATCCTGATGGATaGGATCAGCTGCTTTTCCATTGCATGGAATCTGAGAAAGATCAA +
Preference number: 5 (lower is better)
Translates to: YSHSYLQGYEFHPDG*DQLLFHCMESEKDQ
Trigger: TTGATCTTTCTCAGATTCCATGCAATGGAAAAGCAGCTGATCGCATCCATCAGGATGGAATTCATATCCTTGTAAATATGAATGGCTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS-3UTR CAA 90 bp GTTTATAAAACCTATAAAAAGACTACACCAGCAAAGTCCCTGTCAATCTGTCAGTCAAATTTATCAGGATaGTGCATGCCTGGAATAGAC +
Preference number: 5 (lower is better)
Translates to: VYKTYKKTTPAKSLSICQSNLSG*CMPGID
Trigger: GTCTATTCCAGGCATGCACAATCCTGATAAATTTGA...CTGACAGATTGACAGGGACTTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp TGTTCATTAACATGTAATTCTGGTTCAGAATTACCTTTGAGACTCCTTGCTCAACTATCAAGAAATGCTTaGAGGTCGATGCCATTCAGA +
Preference number: 5 (lower is better)
Translates to: CSLTCNSGSELPLRLLAQLSRNA*RSMPFR
Trigger: TCTGAATGGCATCGACCTCAAAGCATTTCTTGATAG...TTGAGCAAGGAGTCTCAAAGGTAATTCTGAACCAGAATTACATGTTAATGAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS-3UTR CAA 90 bp TGTTCATTAACATGTAATTCTGGTTCAGAATTACCTTTGAGACTCCTTGCTCAATTTCCCTGTTCTCGTTaGATATTGGCTAGGTTATTC +
Preference number: 5 (lower is better)
Translates to: CSLTCNSGSELPLRLLAQFPCSR*ILARLF
Trigger: GAATAACCTAGCCAATATCAAACGAGAACAGGGAAA...TTGAGCAAGGAGTCTCAAAGGTAATTCTGAACCAGAATTACATGTTAATGAACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373719.8
CDS GCA 72 bp TGCAGCATAGGCTCGCTTGCGCCAAAACTAATGCGCTaGCACAGCTGGCTGCTCCTGCGCCTGCGCCACCAG +
Preference number: 6 (lower is better)
Translates to: CSIGSLAPKLMR*HSWLLLRLRHQ
Trigger: CTGGTGGCGCAGGCGCAGGAGCAGCCAGCTGTGGCAGCGCATTAGTTTTGGCGCAAGCGAGCCTATGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CCA 72 bp GGCTCGCTTGCGCCAAAACTAATGCGCTGCCACAGCTaGCTGCTCCTGCGCCTGCGCCACCAGAACCCAAGT +
Preference number: 6 (lower is better)
Translates to: GSLAPKLMRCHS*LLLRLRHQNPS
Trigger: ACTTGGGTTCTGGTGGCGCAGGCGCAGGAGCAGCCAGCTGTGGCAGCGCATTAGTTTTGGCGCAAGCGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS GCA 72 bp GTGCCAACTCAGCTAACCCTGTGCTGTCGGCCACGTTaGCCACGGAAGACGCCATCTGGAGCTTCTCGAGGG +
Preference number: 6 (lower is better)
Translates to: VPTQLTLCCRPR*PRKTPSGASRG
Trigger: CCCTCGAGAAGCTCCAGATGGCGTCTTCCGTGGGCAACGTGGCCGACAGCACAGGGTTAGCTGAGTTGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373701.7
ENST00000488174.5
CDS TCA 72 bp ACAAGGGCAGCAGCCGTAGCAATGCTCTGGAGGGCTTaGGCGGCGGCAGCAGTTACAGGCTTCAAACCCTGG +
Preference number: 6 (lower is better)
Translates to: TRAAAVAMLWRA*AAAAVTGFKPW
Trigger: CCAGGGTTTGAAGCCTGTAACTGCTGCCGCCGCTCAAGCCCTCCAGAGCATTGCTACGGCTGCTGCCCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000472270.1
ENST00000488174.5
CDS CAA 72 bp TGTGCCAACTCAGCTAACCCTGTGCTGTCGGCCACGTaGCCCACGGAAGACGCCATCTGGAGCTTCTCGAGG +
Preference number: 6 (lower is better)
Translates to: CANSANPVLSAT*PTEDAIWSFSR
Trigger: CCTCGAGAAGCTCCAGATGGCGTCTTCCGTGGGCAACGTGGCCGACAGCACAGGGTTAGCTGAGTTGGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373701.7
ENST00000488174.5
CDS GCA 72 bp GCATACGTTTCGTTGGTTCTGTGCTGTCGGCCACGTTaGCCACGGAAGACGCCATCTGGAGCTTCTCGAGGG +
Preference number: 6 (lower is better)
Translates to: AYVSLVLCCRPR*PRKTPSGASRG
Trigger: CCCTCGAGAAGCTCCAGATGGCGTCTTCCGTGGGCAACGTGGCCGACAGCACAGAACCAACGAAACGTATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373719.8
ENST00000472270.1
CDS CCA 72 bp CCATGGGGGTCCCTGCCCAGAGGACATCCATCCCTGTaGTGTGCCCATTACAGAGTGGAGTGTCCAAGCAGA +
Preference number: 6 (lower is better)
Translates to: PWGSLPRGHPSL*CAHYRVECPSR
Trigger: TCTGCTTGGACACTCCACTCTGTAATGGGCACACCACAGGGATGGATGTCCTCTGGGCAGGGACCCCCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000474633.1
ENST00000488174.5
CDS CAA 72 bp TACAAGGGCAGCAGCCGTAGCAATGCTCTGGAGGGCTaGAGCGGCGGCAGCAGTTACAGGCTTCAAACCCTG +
Preference number: 6 (lower is better)
Translates to: YKGSSRSNALEG*SGGSSYRLQTL
Trigger: CAGGGTTTGAAGCCTGTAACTGCTGCCGCCGCTCAAGCCCTCCAGAGCATTGCTACGGCTGCTGCCCTTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000472270.1
ENST00000488174.5
CDS CAA 90 bp CATGTGACTTTTCGGTGCGTTCCTTGCTGGAAGAGGAGGAGGAGGTaGTGTGTCTGCCCTAGATCCAGGCCTCGAGCTCCCTTCAGCGAG +
Preference number: 6 (lower is better)
Translates to: HVTFRCVPCWKRRRR*CVCPRSRPRAPFSE
Trigger: CTCGCTGAAGGGAGCTCGAGGCCTGGATCTAGGGCAGACACACAACCTCCTCCTCCTCTTCCAGCAAGGAACGCACCGAAAAGTCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS GCA 72 bp GGGGTCCCTGCCCAGAGGACATCCATCCCTGTGGTGTaGCCATTACAGAGTGGAGTGTCCAAGCAGACATCA +
Preference number: 6 (lower is better)
Translates to: GVPAQRTSIPVV*PLQSGVSKQTS
Trigger: TGATGTCTGCTTGGACACTCCACTCTGTAATGGGCACACCACAGGGATGGATGTCCTCTGGGCAGGGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000474633.1
ENST00000488174.5
CDS GCA 72 bp AAGAGTCTCTCCTGGCATAGTCACCATGGGGGTCCCTaGCCAGAGGACATCCATCCCTGTGGTGTGCCCATT +
Preference number: 6 (lower is better)
Translates to: KSLSWHSHHGGP*PEDIHPCGVPI
Trigger: AATGGGCACACCACAGGGATGGATGTCCTCTGGGCAGGGACCCCCATGGTGACTATGCCAGGAGAGACTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS GCA 72 bp CAGCAACTTACCTGGCATAGTCACCATGGGGGTCCCTaGCCAGAGGACATCCATCCCTGTGGTGTGCCCATT +
Preference number: 6 (lower is better)
Translates to: QQLTWHSHHGGP*PEDIHPCGVPI
Trigger: AATGGGCACACCACAGGGATGGATGTCCTCTGGGCAGGGACCCCCATGGTGACTATGCCAGGTAAGTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474633.1
CDS GCA 72 bp CTGGCTGCTCCTGCGCCTGCGCCACCAGAACCCAAGTaGAAACCACCATGTTCAGTTCTGCCAACCAAAGAC +
Preference number: 6 (lower is better)
Translates to: LAAPAPAPPEPK*KPPCSVLPTKD
Trigger: GTCTTTGGTTGGCAGAACTGAACATGGTGGTTTGCACTTGGGTTCTGGTGGCGCAGGCGCAGGAGCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS GCA 72 bp GACCAGCCAAAAGTGACCCTGCAGCATAGGCTCGCTTaGGCCAAAACTAATGCGCTGCCACAGCTGGCTGCT +
Preference number: 6 (lower is better)
Translates to: DQPKVTLQHRLA*AKTNALPQLAA
Trigger: AGCAGCCAGCTGTGGCAGCGCATTAGTTTTGGCGCAAGCGAGCCTATGCTGCAGGGTCACTTTTGGCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CAA 72 bp AGCATACGTTTCGTTGGTTCTGTGCTGTCGGCCACGTaGCCCACGGAAGACGCCATCTGGAGCTTCTCGAGG +
Preference number: 6 (lower is better)
Translates to: SIRFVGSVLSAT*PTEDAIWSFSR
Trigger: CCTCGAGAAGCTCCAGATGGCGTCTTCCGTGGGCAACGTGGCCGACAGCACAGAACCAACGAAACGTATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373719.8
ENST00000472270.1
CDS TCA 72 bp CACCTACCTTGGCTTCTTCCAAGCGACCCAGGGCTTTaGGCAGGTTCCCCAGGTCACTGCGAACACAGTACA +
Preference number: 6 (lower is better)
Translates to: HLPWLLPSDPGL*AGSPGHCEHST
Trigger: TGTACTGTGTTCGCAGTGACCTGGGGAACCTGCTCAAAGCCCTGGGTCGCTTGGAAGAAGCCAAGGTAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS GCA 72 bp GACAGCTACTCTGCGCATACACTCCACGCATTAGCATaGGCGTGGGGCTCAGAGCAACAGGTGGGAGTTTCA +
Preference number: 6 (lower is better)
Translates to: DSYSAHTLHALA*AWGSEQQVGVS
Trigger: TGAAACTCCCACCTGTTGCTCTGAGCCCCACGCGCATGCTAATGCGTGGAGTGTATGCGCAGAGTAGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS GCA 72 bp CCTCCCTGGATGAAGCAGTCAAACAGACAGCTACTCTaGGCATACACTCCACGCATTAGCATGCGCGTGGGG +
Preference number: 6 (lower is better)
Translates to: PPWMKQSNRQLL*AYTPRISMRVG
Trigger: CCCCACGCGCATGCTAATGCGTGGAGTGTATGCGCAGAGTAGCTGTCTGTTTGACTGCTTCATCCAGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CCA 72 bp GAGGACATCCATCCCTGTGGTGTGCCCATTACAGAGTaGAGTGTCCAAGCAGACATCAGCCAGCTGGCCTCT +
Preference number: 6 (lower is better)
Translates to: EDIHPCGVPITE*SVQADISQLAS
Trigger: AGAGGCCAGCTGGCTGATGTCTGCTTGGACACTCCACTCTGTAATGGGCACACCACAGGGATGGATGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000474633.1
ENST00000488174.5
CDS CAA 72 bp ACACCTACCTTGGCTTCTTCCAAGCGACCCAGGGCTTaGAGCAGGTTCCCCAGGTCACTGCGAACACAGTAC +
Preference number: 6 (lower is better)
Translates to: TPTLASSKRPRA*SRFPRSLRTQY
Trigger: GTACTGTGTTCGCAGTGACCTGGGGAACCTGCTCAAAGCCCTGGGTCGCTTGGAAGAAGCCAAGGTAGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CAA 72 bp CATTCGCACGCAATGCGCATTAACGCTGCGCAGCCTTaGCGCTACTGCAGGGTCACAGCGCATCATCAGAAG +
Preference number: 6 (lower is better)
Translates to: HSHAMRINAAQP*RYCRVTAHHQK
Trigger: CTTCTGATGATGCGCTGTGACCCTGCAGTAGCGCAAAGGCTGCGCAGCGTTAATGCGCATTGCGTGCGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CAA 90 bp ACAGGGGTTCATTCGCACGCAATGCGCATTAACGCTGCGCAGCCTTaGCGCTACTGCAGGGTCACAGCGCATCATCAGAAGAGCAGAATG +
Preference number: 6 (lower is better)
Translates to: TGVHSHAMRINAAQP*RYCRVTAHHQKSRM
Trigger: CATTCTGCTCTTCTGATGATGCGCTGTGACCCTGCAGTAGCGCAAAGGCTGCGCAGCGTTAATGCGCATTGCGTGCGAATGAACCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS TCA 72 bp AACATGCCTTGGCTTCTTCCAAGCGACCCAGGGCTTTaGGCAGGTTCCCCAGGTCACTGCGAACACAGTACA +
Preference number: 6 (lower is better)
Translates to: NMPWLLPSDPGL*AGSPGHCEHST
Trigger: TGTACTGTGTTCGCAGTGACCTGGGGAACCTGCTCAAAGCCCTGGGTCGCTTGGAAGAAGCCAAGGCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000455587.3
CDS TCA 72 bp CTCAAGTCTTGGCTTCTTCCAAGCGACCCAGGGCTTTaGGCAGGTTCCCCAGGTCACTGCGAACACAGTACA +
Preference number: 6 (lower is better)
Translates to: LKSWLLPSDPGL*AGSPGHCEHST
Trigger: TGTACTGTGTTCGCAGTGACCTGGGGAACCTGCTCAAAGCCCTGGGTCGCTTGGAAGAAGCCAAGACTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498566.3
CDS GCA 72 bp AGCTGGGCATGTCACAAGTGGGCAAGAGAGCAGATGTaGGTTGGCGGCTCAGTTGAAACCCGGTACTGGAAA +
Preference number: 6 (lower is better)
Translates to: SWACHKWAREQM*VGGSVETRYWK
Trigger: TTTCCAGTACCGGGTTTCAACTGAGCCGCCAACGCACATCTGCTCTCTTGCCCACTTGTGACATGCCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472270.1
CDS GCA 72 bp GCAATGCGCATTAACGCTGCGCAGCCTTTGCGCTACTaGAGGGTCACAGCGCATCATCAGAAGAGCAGAATG +
Preference number: 6 (lower is better)
Translates to: AMRINAAQPLRY*RVTAHHQKSRM
Trigger: CATTCTGCTCTTCTGATGATGCGCTGTGACCCTGCAGTAGCGCAAAGGCTGCGCAGCGTTAATGCGCATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS GCA 72 bp ATTCGCACGCAATGCGCATTAACGCTGCGCAGCCTTTaGGCTACTGCAGGGTCACAGCGCATCATCAGAAGA +
Preference number: 6 (lower is better)
Translates to: IRTQCALTLRSL*ATAGSQRIIRR
Trigger: TCTTCTGATGATGCGCTGTGACCCTGCAGTAGCGCAAAGGCTGCGCAGCGTTAATGCGCATTGCGTGCGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS GCA 72 bp CTAGTCAACCGTTCACAGGGGTTCATTCGCACGCAATaGGCATTAACGCTGCGCAGCCTTTGCGCTACTGCA +
Preference number: 6 (lower is better)
Translates to: LVNRSQGFIRTQ*ALTLRSLCATA
Trigger: TGCAGTAGCGCAAAGGCTGCGCAGCGTTAATGCGCATTGCGTGCGAATGAACCCCTGTGAACGGTTGACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CCA 72 bp TACTCTGCGCATACACTCCACGCATTAGCATGCGCGTaGGGCTCAGAGCAACAGGTGGGAGTTTCAGAAGCA +
Preference number: 6 (lower is better)
Translates to: YSAHTLHALACA*GSEQQVGVSEA
Trigger: TGCTTCTGAAACTCCCACCTGTTGCTCTGAGCCCCACGCGCATGCTAATGCGTGGAGTGTATGCGCAGAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CAA 72 bp TCTCAAGTCTTGGCTTCTTCCAAGCGACCCAGGGCTTaGAGCAGGTTCCCCAGGTCACTGCGAACACAGTAC +
Preference number: 6 (lower is better)
Translates to: SQVLASSKRPRA*SRFPRSLRTQY
Trigger: GTACTGTGTTCGCAGTGACCTGGGGAACCTGCTCAAAGCCCTGGGTCGCTTGGAAGAAGCCAAGACTTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498566.3
CDS GCA 72 bp GACGTAAGCTTGTACTGCCCCTTCCATGTCACCCGCTaGTACCAAGGCGGCTGCCAGGTTAATATAACCATC +
Preference number: 6 (lower is better)
Translates to: DVSLYCPFHVTR*YQGGCQVNITI
Trigger: GATGGTTATATTAACCTGGCAGCCGCCTTGGTAGCAGCGGGTGACATGGAAGGGGCAGTACAAGCTTACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000444774.3
ENST00000455587.3
ENST00000488174.5
ENST00000498566.3
CDS CAA 90 bp TTCGATAGCCCGCCTGTAGGTGTCTATTGCCAGATCTATCAGGCCTaGCTCATAGTATACACAAGCCAGGTTGCCGTGCACCACTGCGTG +
Preference number: 6 (lower is better)
Translates to: FDSPPVGVYCQIYQA*LIVYTSQVAVHHCV
Trigger: CACGCAGTGGTGCACGGCAACCTGGCTTGTGTATACTATGAGCAAGGCCTGATAGATCTGGCAATAGACACCTACAGGCGGGCTATCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000459760.1
CDS GCA 72 bp CACCAGTATTGTCTGGCTCTTGTCTCCAGAGCTGCATaGAGTGTCTCTCAGCTGCCTCAAAATCTCCTGCCT +
Preference number: 6 (lower is better)
Translates to: HQYCLALVSRAA*SVSQLPQNLLP
Trigger: AGGCAGGAGATTTTGAGGCAGCTGAGAGACACTGCATGCAGCTCTGGAGACAAGAGCCAGACAATACTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000444774.3
ENST00000472270.1
ENST00000488174.5
ENST00000498566.3
CDS GCA 72 bp GATTGGCTTCTGCCATCACCTTCACTCGGAAGTTTGTaGCATCGTCTGGGCTCAGGGCATAACAGAACACCT +
Preference number: 6 (lower is better)
Translates to: DWLLPSPSLGSL*HRLGSGHNRTP
Trigger: AGGTGTTCTGTTATGCCCTGAGCCCAGACGATGGCACAAACTTCCGAGTGAAGGTGATGGCAGAAGCCAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS CAA 72 bp CCGCCTGTAGGTGTCTATTGCCAGATCTATCAGGCCTaGCTCATAGTATACACAAGCCAGGTTGCCGTGCAC +
Preference number: 6 (lower is better)
Translates to: PPVGVYCQIYQA*LIVYTSQVAVH
Trigger: GTGCACGGCAACCTGGCTTGTGTATACTATGAGCAAGGCCTGATAGATCTGGCAATAGACACCTACAGGCGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000459760.1
CDS CAA 72 bp GGGCATGTCACAAGTGGGCAAGAGAGCAGATGTGCGTaGGCGGCTCAGTTGAAACCCGGTACTGGAAAAATT +
Preference number: 6 (lower is better)
Translates to: GHVTSGQESRCA*AAQLKPGTGKI
Trigger: AATTTTTCCAGTACCGGGTTTCAACTGAGCCGCCAACGCACATCTGCTCTCTTGCCCACTTGTGACATGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472270.1
CDS CAA 90 bp CTGGCAGCTGGGCATGTCACAAGTGGGCAAGAGAGCAGATGTGCGTaGGCGGCTCAGTTGAAACCCGGTACTGGAAAAATTTCAAGTTCA +
Preference number: 6 (lower is better)
Translates to: LAAGHVTSGQESRCA*AAQLKPGTGKISSS
Trigger: TGAACTTGAAATTTTTCCAGTACCGGGTTTCAACTGAGCCGCCAACGCACATCTGCTCTCTTGCCCACTTGTGACATGCCCAGCTGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472270.1
CDS CAA 90 bp GCTCATAGTATACACAAGCCAGGTTGCCGTGCACCACTGCGTGATTaGGACTCAAACTTAGGGCACGAAGATAAGCTGCCACAGCTCTGT +
Preference number: 6 (lower is better)
Translates to: AHSIHKPGCRAPLRD*DSNLGHEDKLPQLC
Trigger: ACAGAGCTGTGGCAGCTTATCTTCGTGCCCTAAGTTTGAGTCCAAATCACGCAGTGGTGCACGGCAACCTGGCTTGTGTATACTATGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000459760.1
CDS CAA 90 bp TTCTATCAAACACCTACCTTGGCTTCTTCCAAGCGACCCAGGGCTTaGAGCAGGTTCCCCAGGTCACTGCGAACACAGTACAAATCAGGA +
Preference number: 6 (lower is better)
Translates to: FYQTPTLASSKRPRA*SRFPRSLRTQYKSG
Trigger: TCCTGATTTGTACTGTGTTCGCAGTGACCTGGGGAACCTGCTCAAAGCCCTGGGTCGCTTGGAAGAAGCCAAGGTAGGTGTTTGATAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS TCA 72 bp AAGCTGAAACCTCACATGACAGGATTGCACCTAGGTTaGGGTCCCTGTAATGCGAGCGCAAACATCGCTTGC +
Preference number: 6 (lower is better)
Translates to: KLKPHMTGLHLG*GPCNASANIAC
Trigger: GCAAGCGATGTTTGCGCTCGCATTACAGGGACCTCAACCTAGGTGCAATCCTGTCATGTGAGGTTTCAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS GCA 72 bp TGCCCCTTCCATGTCACCCGCTGCTACCAAGGCGGCTaGCAGGTTAATATAACCATCGATGAAATCAGGTTT +
Preference number: 6 (lower is better)
Translates to: CPFHVTRCYQGG*QVNITIDEIRF
Trigger: AAACCTGATTTCATCGATGGTTATATTAACCTGGCAGCCGCCTTGGTAGCAGCGGGTGACATGGAAGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000444774.3
ENST00000455587.3
ENST00000488174.5
ENST00000498566.3
CDS CCA 72 bp ACAAGGAAGATTCCAGTGATTTATCAGCAACTTACCTaGCATAGTCACCATGGGGGTCCCTGCCCAGAGGAC +
Preference number: 6 (lower is better)
Translates to: TRKIPVIYQQLT*HSHHGGPCPED
Trigger: GTCCTCTGGGCAGGGACCCCCATGGTGACTATGCCAGGTAAGTTGCTGATAAATCACTGGAATCTTCCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474633.1
CDS CAA 72 bp CCATATTTCTCATCATGTGACTTTTCGGTGCGTTCCTaGCTGGAAGAGGAGGAGGAGGTTGTGTGTCTGCCC +
Preference number: 6 (lower is better)
Translates to: PYFSSCDFSVRS*LEEEEEVVCLP
Trigger: GGGCAGACACACAACCTCCTCCTCCTCTTCCAGCAAGGAACGCACCGAAAAGTCACATGATGAGAAATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CAA 90 bp TTAGAAGAGCAGCATTTTCAATGGCACCTGCATCATATAGGAGTCTaGAGCCAAATCACAGGCGCTCTGCTTGTCACCAGCAGGCAAGCC +
Preference number: 6 (lower is better)
Translates to: LEEQHFQWHLHHIGV*SQITGALLVTSRQA
Trigger: GGCTTGCCTGCTGGTGACAAGCAGAGCGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGGTGCCATTGAAAATGCTGCTCTTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS TCA 72 bp ATGCAGTGTCTCTCAGCTGCCTCAAAATCTCCTGCCTaGTATTCTCGATGTGCCAACTCAGCTAACCCTTGG +
Preference number: 6 (lower is better)
Translates to: MQCLSAASKSPA*YSRCANSANPW
Trigger: CCAAGGGTTAGCTGAGTTGGCACATCGAGAATATCAGGCAGGAGATTTTGAGGCAGCTGAGAGACACTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373719.8
ENST00000444774.3
ENST00000472270.1
ENST00000498566.3
CDS TCA 72 bp ATGCAGTGTCTCTCAGCTGCCTCAAAATCTCCTGCCTaGTATTCTCGATGTGCCAACTCAGCTAACCCTGTG +
Preference number: 6 (lower is better)
Translates to: MQCLSAASKSPA*YSRCANSANPV
Trigger: CACAGGGTTAGCTGAGTTGGCACATCGAGAATATCAGGCAGGAGATTTTGAGGCAGCTGAGAGACACTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373701.7
ENST00000488174.5
CDS TCA 72 bp AGAACAGATATGCCAAAGCCTGGCCCTGCTCTATTCTaGGGCGATTCGTGCCGTCAGTTTTCCTCAGTTTCA +
Preference number: 6 (lower is better)
Translates to: RTDMPKPGPALF*GDSCRQFSSVS
Trigger: TGAAACTGAGGAAAACTGACGGCACGAATCGCCTCAGAATAGAGCAGGGCCAGGCTTTGGCATATCTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CAA 72 bp CAAATCAGGATTGTACTGAAGAGCAGAGACGTAAGCTaGTACTGCCCCTTCCATGTCACCCGCTGCTACCAA +
Preference number: 6 (lower is better)
Translates to: QIRIVLKSRDVS*YCPFHVTRCYQ
Trigger: TTGGTAGCAGCGGGTGACATGGAAGGGGCAGTACAAGCTTACGTCTCTGCTCTTCAGTACAATCCTGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000444774.3
ENST00000455587.3
ENST00000488174.5
ENST00000498566.3
CDS CAA 72 bp GAGCTTCCTGCAGTTTTCCCTGCTGCTGCAGTACACTaGCTAAATTTGAATGGGCAGCAGCAAACTCTGGGA +
Preference number: 6 (lower is better)
Translates to: ELPAVFPAAAVH*LNLNGQQQTLG
Trigger: TCCCAGAGTTTGCTGCTGCCCATTCAAATTTAGCAAGTGTACTGCAGCAGCAGGGAAAACTGCAGGAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000459760.1
ENST00000462638.1
ENST00000466181.1
ENST00000488174.5
CDS CAA 72 bp AATGATTGGCTTCTGCCATCACCTTCACTCGGAAGTTaGTGCCATCGTCTGGGCTCAGGGCATAACAGAACA +
Preference number: 6 (lower is better)
Translates to: NDWLLPSPSLGS*CHRLGSGHNRT
Trigger: TGTTCTGTTATGCCCTGAGCCCAGACGATGGCACAAACTTCCGAGTGAAGGTGATGGCAGAAGCCAATCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS CAA 72 bp CCTACTGCTGGAAAACGCAACAGCCAGAGTACACTATaGGGAACACGCTTCAGAATGTTTGCCCACATCTGC +
Preference number: 6 (lower is better)
Translates to: PTAGKRNSQSTL*GTRFRMFAHIC
Trigger: GCAGATGTGGGCAAACATTCTGAAGCGTGTTCCCAATAGTGTACTCTGGCTGTTGCGTTTTCCAGCAGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000474633.1
ENST00000488174.5
CDS TCA 72 bp GGTGATATCATTATTCCTTCTCTGACCAGCCAAAAGTaGCCCTGCAGCATAGGCTCGCTTGCGCCAAAACTA +
Preference number: 6 (lower is better)
Translates to: GDIIIPSLTSQK*PCSIGSLAPKL
Trigger: TAGTTTTGGCGCAAGCGAGCCTATGCTGCAGGGTCACTTTTGGCTGGTCAGAGAAGGAATAATGATATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS GCA 72 bp CGAATAAGCTTCTGCCAGAAGGGGGTTCTGTTTAATTaGCAGAGTGCTAAAGTGAGCAGATCTGTCCAGCCT +
Preference number: 6 (lower is better)
Translates to: RISFCQKGVLFN*QSAKVSRSVQP
Trigger: AGGCTGGACAGATCTGCTCACTTTAGCACTCTGGCAATTAAACAGAACCCCCTTCTGGCAGAAGCTTATTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000444774.3
ENST00000488174.5
ENST00000498566.3
CDS GCA 72 bp CTATCAGGCCTTGCTCATAGTATACACAAGCCAGGTTaGCGTGCACCACTGCGTGATTTGGACTCAAACTTA +
Preference number: 6 (lower is better)
Translates to: LSGLAHSIHKPG*RAPLRDLDSNL
Trigger: TAAGTTTGAGTCCAAATCACGCAGTGGTGCACGGCAACCTGGCTTGTGTATACTATGAGCAAGGCCTGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000459760.1
CDS GCA 72 bp GGTTACAATAATGGTACGGGGAACCTCCTCTCCAGTTaGAGCCTTATTGTTGATCTGAGTAGTTGCCAGTCC +
Preference number: 6 (lower is better)
Translates to: GYNNGTGNLLSS*SLIVDLSSCQS
Trigger: GGACTGGCAACTACTCAGATCAACAATAAGGCTGCAACTGGAGAGGAGGTTCCCCGTACCATTATTGTAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS GCA 72 bp CAGGTTCTTGCTTTACCCCCAGATTTAGAACAGATATaGCAAAGCCTGGCCCTGCTCTATTCTGAGGCGATT +
Preference number: 6 (lower is better)
Translates to: QVLALPPDLEQI*QSLALLYSEAI
Trigger: AATCGCCTCAGAATAGAGCAGGGCCAGGCTTTGGCATATCTGTTCTAAATCTGGGGGTAAAGCAAGAACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CCA 72 bp TGCCATCACCTTCACTCGGAAGTTTGTGCCATCGTCTaGGCTCAGGGCATAACAGAACACCTCAAATTTATC +
Preference number: 6 (lower is better)
Translates to: CHHLHSEVCAIV*AQGITEHLKFI
Trigger: GATAAATTTGAGGTGTTCTGTTATGCCCTGAGCCCAGACGATGGCACAAACTTCCGAGTGAAGGTGATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS CCA 72 bp GCCAACCAAAGACCAACCCTTACACTGGGACTTAACTaGGAAGTCAGTTGCTATAAGGCTCTATGCTGGAGT +
Preference number: 6 (lower is better)
Translates to: ANQRPTLTLGLN*EVSCYKALCWS
Trigger: ACTCCAGCATAGAGCCTTATAGCAACTGACTTCCCAGTTAAGTCCCAGTGTAAGGGTTGGTCTTTGGTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CAA 72 bp ATGCTGGAGTTCTCTTATCCAAACAACTACGGGCCCTaGTCATGTTTTCAAGTGCTACCTAGAGGGCGCAAC +
Preference number: 6 (lower is better)
Translates to: MLEFSYPNNYGP*SCFQVLPRGRN
Trigger: GTTGCGCCCTCTAGGTAGCACTTGAAAACATGACAAGGGCCCGTAGTTGTTTGGATAAGAGAACTCCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CAA 90 bp TACAAGCGAACTGCCTCTTCAATGTTTCCCTGTTCTCGTTTGATATaGGCTAGGTTATTCAGAGAGTCTGCATGGGTGGGACACAGACGG +
Preference number: 6 (lower is better)
Translates to: YKRTASSMFPCSRLI*ARLFRESAWVGHRR
Trigger: CCGTCTGTGTCCCACCCATGCAGACTCTCTGAATAACCTAGCCAATATCAAACGAGAACAGGGAAACATTGAAGAGGCAGTTCGCTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000459760.1
ENST00000462638.1
ENST00000488174.5
CDS CAA 90 bp CAAATCACAGGCGCTCTGCTTGTCACCAGCAGGCAAGCCTCAGATTaGAAGGAATGTTATTTATTCCCACATAAGATCATGACGGAGCCC +
Preference number: 6 (lower is better)
Translates to: QITGALLVTSRQASD*KECYLFPHKIMTEP
Trigger: GGGCTCCGTCATGATCTTATGTGGGAATAAATAACATTCCTTCAAATCTGAGGCTTGCCTGCTGGTGACAAGCAGAGCGCCTGTGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CAA 90 bp AATGCATCAGAGCTTCCTGCAGTTTTCCCTGCTGCTGCAGTACACTaGCTAAATTTGAATGGGCAGCAGCAAACTCTGGGAAGACTTCTA +
Preference number: 6 (lower is better)
Translates to: NASELPAVFPAAAVH*LNLNGQQQTLGRLL
Trigger: TAGAAGTCTTCCCAGAGTTTGCTGCTGCCCATTCAAATTTAGCAAGTGTACTGCAGCAGCAGGGAAAACTGCAGGAAGCTCTGATGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000459760.1
ENST00000462638.1
ENST00000488174.5
CDS CAA 90 bp AATGGAAGCCAGATTGCTATGTGCATCTGCAAATGCAGGATTAATTaGGATGGCACGCGTATAACACTGCAAGGCTCCCTGAACATCCTG +
Preference number: 6 (lower is better)
Translates to: NGSQIAMCICKCRIN*DGTRITLQGSLNIL
Trigger: CAGGATGTTCAGGGAGCCTTGCAGTGTTATACGCGTGCCATCCAAATTAATCCTGCATTTGCAGATGCACATAGCAATCTGGCTTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS CAA 90 bp AATGCATCAGAGCTTCCTGCAGTTTTCCCTGCTGCTGCAGTACACTaGCTAAATTTGAATGGGCAGCAGCAAACTCTGGGAAGACCTATA +
Preference number: 6 (lower is better)
Translates to: NASELPAVFPAAAVH*LNLNGQQQTLGRPI
Trigger: TATAGGTCTTCCCAGAGTTTGCTGCTGCCCATTCAAATTTAGCAAGTGTACTGCAGCAGCAGGGAAAACTGCAGGAAGCTCTGATGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466181.1
CDS TCA 72 bp CGGAACTCACATATCCTACACGCAGCCGACCATCACTaGGCTTCAAGTCTTTTGGATGTTCATATGGTGGTT +
Preference number: 6 (lower is better)
Translates to: RNSHILHAADHH*ASSLLDVHMVV
Trigger: AACCACCATATGAACATCCAAAAGACTTGAAGCTCAGTGATGGTCGGCTGCGTGTAGGATATGTGAGTTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS TCA 72 bp TTACAGTATACGATGGCATCTTCTGGTAACCCGTACTaGGAACGGGTGGTTACAATAATGGTACGGGGAACC +
Preference number: 6 (lower is better)
Translates to: LQYTMASSGNPY*ERVVTIMVRGT
Trigger: GGTTCCCCGTACCATTATTGTAACCACCCGTTCTCAGTACGGGTTACCAGAAGATGCCATCGTATACTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS TCA 72 bp GTGGGCAAGAGAGCAGATGTGCGTTGGCGGCTCAGTTaGAACCCGGTACTGGAAAAATTTCAAGTTCAAATA +
Preference number: 6 (lower is better)
Translates to: VGKRADVRWRLS*NPVLEKFQVQI
Trigger: TATTTGAACTTGAAATTTTTCCAGTACCGGGTTTCAACTGAGCCGCCAACGCACATCTGCTCTCTTGCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472270.1
CDS CCA 72 bp TTAGCAATAAGCTCAAGACAACCTAAGCAAGTGAGCTaGGATGCTGCAACTCGAGAAGCAAGAGTCTCTCCT +
Preference number: 6 (lower is better)
Translates to: LAISSRQPKQVS*DAATREARVSP
Trigger: AGGAGAGACTCTTGCTTCTCGAGTTGCAGCATCCCAGCTCACTTGCTTAGGTTGTCTTGAGCTTATTGCTAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS CCA 72 bp TGTTCAGTTCTGCCAACCAAAGACCAACCCTTACACTaGGACTTAACTGGGAAGTCAGTTGCTATAAGGCTC +
Preference number: 6 (lower is better)
Translates to: CSVLPTKDQPLH*DLTGKSVAIRL
Trigger: GAGCCTTATAGCAACTGACTTCCCAGTTAAGTCCCAGTGTAAGGGTTGGTCTTTGGTTGGCAGAACTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CAA 72 bp AGTGGGCAAGAGAGCAGATGTGCGTTGGCGGCTCAGTaGAAACCCGGTACTGGAAAAATTTCAAGTTCAAAT +
Preference number: 6 (lower is better)
Translates to: SGQESRCALAAQ*KPGTGKISSSN
Trigger: ATTTGAACTTGAAATTTTTCCAGTACCGGGTTTCAACTGAGCCGCCAACGCACATCTGCTCTCTTGCCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472270.1
CDS CAA 90 bp TTACGATACAAGCGAACTGCCTCTTCAATGTTTCCCTGTTCTCGTTaGATATTGGCTAGGTTATTCAGAGAGTCTGCATGGGTGGGACAC +
Preference number: 6 (lower is better)
Translates to: LRYKRTASSMFPCSR*ILARLFRESAWVGH
Trigger: GTGTCCCACCCATGCAGACTCTCTGAATAACCTAGCCAATATCAAACGAGAACAGGGAAACATTGAAGAGGCAGTTCGCTTGTATCGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000459760.1
ENST00000462638.1
ENST00000488174.5
CDS GCA 72 bp CGAATAAGCTTCTGCCAGAAGGGGGTTCTGTTTAATTaGCAGAGTGCTAAAGTGAGCAGATCTGTAATCCCA +
Preference number: 6 (lower is better)
Translates to: RISFCQKGVLFN*QSAKVSRSVIP
Trigger: TGGGATTACAGATCTGCTCACTTTAGCACTCTGGCAATTAAACAGAACCCCCTTCTGGCAGAAGCTTATTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455587.3
CDS GCA 72 bp CCAACCCTTACACTGGGACTTAACTGGGAAGTCAGTTaGTATAAGGCTCTATGCTGGAGTTCTCTTATCCAA +
Preference number: 6 (lower is better)
Translates to: PTLTLGLNWEVS*YKALCWSSLIQ
Trigger: TTGGATAAGAGAACTCCAGCATAGAGCCTTATAGCAACTGACTTCCCAGTTAAGTCCCAGTGTAAGGGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CCA 72 bp GCTGTTTCTGAAGCCACAAGACAGAAGATTCAGGCATaGAGGCAAATTGTTTTGCTGTGGCAGTTACAAACC +
Preference number: 6 (lower is better)
Translates to: AVSEATRQKIQA*RQIVLLWQLQT
Trigger: GGTTTGTAACTGCCACAGCAAAACAATTTGCCTCCATGCCTGAATCTTCTGTCTTGTGGCTTCAGAAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CCA 72 bp CTTAACTGGGAAGTCAGTTGCTATAAGGCTCTATGCTaGAGTTCTCTTATCCAAACAACTACGGGCCCTTGT +
Preference number: 6 (lower is better)
Translates to: LNWEVSCYKALC*SSLIQTTTGPC
Trigger: ACAAGGGCCCGTAGTTGTTTGGATAAGAGAACTCCAGCATAGAGCCTTATAGCAACTGACTTCCCAGTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CAA 72 bp ACTGCCTCTTCAATGTTTCCCTGTTCTCGTTTGATATaGGCTAGGTTATTCAGAGAGTCTGCATGGGTGGGA +
Preference number: 6 (lower is better)
Translates to: TASSMFPCSRLI*ARLFRESAWVG
Trigger: TCCCACCCATGCAGACTCTCTGAATAACCTAGCCAATATCAAACGAGAACAGGGAAACATTGAAGAGGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000459760.1
ENST00000462638.1
ENST00000488174.5
CDS GCA 72 bp TTCCTTGTACACATTCCCCAAATTCGAATAAGCTTCTaGCAGAAGGGGGTTCTGTTTAATTGCCAGAGTGCT +
Preference number: 6 (lower is better)
Translates to: FLVHIPQIRISF*QKGVLFNCQSA
Trigger: AGCACTCTGGCAATTAAACAGAACCCCCTTCTGGCAGAAGCTTATTCGAATTTGGGGAATGTGTACAAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000444774.3
ENST00000455587.3
ENST00000488174.5
ENST00000498566.3
CDS CAA 72 bp ACAGCCAAGATTACTCCAAGCTACTGCAAAGTTCGGTaGCGTCTCAATTGCTTTCAAATAACATGCCTTGGC +
Preference number: 6 (lower is better)
Translates to: TAKITPSYCKVR*RLNCFQITCLG
Trigger: GCCAAGGCATGTTATTTGAAAGCAATTGAGACGCAACCGAACTTTGCAGTAGCTTGGAGTAATCTTGGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000455587.3
CDS GCA 72 bp GTTTTGTGCATACTGTTGAATATTAGGTTCTCCTACTaGTGGAAAACGCAACAGCCAGAGTACACTATTGGG +
Preference number: 6 (lower is better)
Translates to: VLCILLNIRFSY*WKTQQPEYTIG
Trigger: CCCAATAGTGTACTCTGGCTGTTGCGTTTTCCAGCAGTAGGAGAACCTAATATTCAACAGTATGCACAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000474633.1
ENST00000488174.5
CDS CAA 72 bp ACAGCCAAGATTACTCCAAGCTACTGCAAAGTTCGGTaGCGTCTCAATTGCTTTCAAATAACATGCCTTAGG +
Preference number: 6 (lower is better)
Translates to: TAKITPSYCKVR*RLNCFQITCLR
Trigger: CCTAAGGCATGTTATTTGAAAGCAATTGAGACGCAACCGAACTTTGCAGTAGCTTGGAGTAATCTTGGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CAA 90 bp AGACAAGTAAGAAGTATGTTATCTAGTTCCCTTTCCCCCAGAAGGTaGAGGCTCAGGTATAGGGGTAATTCTCCTGTGCAGTCTTTATTT +
Preference number: 6 (lower is better)
Translates to: RQVRSMLSSSLSPRR*RLRYRGNSPVQSLF
Trigger: AAATAAAGACTGCACAGGAGAATTACCCCTATACCTGAGCCTCAACCTTCTGGGGGAAAGGGAACTAGATAACATACTTCTTACTTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373719.8
ENST00000488174.5
CDS GCA 72 bp AATATAACCATCGATGAAATCAGGTTTGAGACGCAATaGATGTCGATAATGCTCAATTGCCTCCTGCAACTG +
Preference number: 6 (lower is better)
Translates to: NITIDEIRFETQ*MSIMLNCLLQL
Trigger: CAGTTGCAGGAGGCAATTGAGCATTATCGACATGCATTGCGTCTCAAACCTGATTTCATCGATGGTTATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000444774.3
ENST00000455587.3
ENST00000488174.5
ENST00000498566.3
CDS CCA 72 bp AGCCAATTTCTCGGAATACTGCTCAGCAACTTCAGCTaGCGAAGTTTCCTGATCAGTGATAATATAATCCAT +
Preference number: 6 (lower is better)
Translates to: SQFLGILLSNFS*RSFLISDNIIH
Trigger: ATGGATTATATTATCACTGATCAGGAAACTTCGCCAGCTGAAGTTGCTGAGCAGTATTCCGAGAAATTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS CCA 72 bp CAGAAGATTCAGGCATGGAGGCAAATTGTTTTGCTGTaGCAGTTACAAACCCGTTACCATATTTCTCATCAT +
Preference number: 6 (lower is better)
Translates to: QKIQAWRQIVLL*QLQTRYHISHH
Trigger: ATGATGAGAAATATGGTAACGGGTTTGTAACTGCCACAGCAAAACAATTTGCCTCCATGCCTGAATCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CAA 72 bp AAGTGTATAGATGAAAGTAATAAAAGCACACCAGTATaGTCTGGCTCTTGTCTCCAGAGCTGCATGCAGTGT +
Preference number: 6 (lower is better)
Translates to: KCIDESNKSTPV*SGSCLQSCMQC
Trigger: ACACTGCATGCAGCTCTGGAGACAAGAGCCAGACAATACTGGTGTGCTTTTATTACTTTCATCTATACACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000444774.3
ENST00000472270.1
ENST00000488174.5
ENST00000498566.3
CDS CAA 90 bp ATTGAAAACACAGCCAAGATTACTCCAAGCTACTGCAAAGTTCGGTaGCGTCTCAATTGCTTTCAAATAACATGCCTTGGCTTCTTCCAA +
Preference number: 6 (lower is better)
Translates to: IENTAKITPSYCKVR*RLNCFQITCLGFFQ
Trigger: TTGGAAGAAGCCAAGGCATGTTATTTGAAAGCAATTGAGACGCAACCGAACTTTGCAGTAGCTTGGAGTAATCTTGGCTGTGTTTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000455587.3
CDS GCA 72 bp TGCATTGAAAACACAGCCAAGATTACTCCAAGCTACTaGAAAGTTCGGTTGCGTCTCAATTGCTTTCAAATA +
Preference number: 6 (lower is better)
Translates to: CIENTAKITPSY*KVRLRLNCFQI
Trigger: TATTTGAAAGCAATTGAGACGCAACCGAACTTTGCAGTAGCTTGGAGTAATCTTGGCTGTGTTTTCAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000455587.3
ENST00000488174.5
CDS GCA 72 bp TCATATTTACAAGGATATGAATTCCATCCTGATGGATaGGATCAGCTGCTTTTCCATTGCATGGAATCTGAG +
Preference number: 6 (lower is better)
Translates to: SYLQGYEFHPDG*DQLLFHCMESE
Trigger: CTCAGATTCCATGCAATGGAAAAGCAGCTGATCGCATCCATCAGGATGGAATTCATATCCTTGTAAATATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS CAA 72 bp TTGGAAACACAGAATGCTAAAAGCCACCTTTCCACTTaGGCAAGTTTTCTTTCGATCAGTCCATTTCCCAAA +
Preference number: 6 (lower is better)
Translates to: LETQNAKSHLST*ASFLSISPFPK
Trigger: TTTGGGAAATGGACTGATCGAAAGAAAACTTGCCAAAGTGGAAAGGTGGCTTTTAGCATTCTGTGTTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488174.5
CDS CAA 90 bp ATAGGAATAACAGGCATATTAAGAGCTGTGTTACTGCTATCTGCATaGTCTCCTCCATCAGGACACTTCATCTTGACAATTTTCACATCT +
Preference number: 6 (lower is better)
Translates to: IGITGILRAVLLLSA*SPPSGHFILTIFTS
Trigger: AGATGTGAAAATTGTCAAGATGAAGTGTCCTGATGGAGGAGACAATGCAGATAGCAGTAACACAGCTCTTAATATGCCTGTTATTCCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS TCA 72 bp CAATTTTCACATCTGGTAGACTATCAAGAAATGCTTTaGGGTCGATGCCATTCAGAACTATCCGATTGTCAT +
Preference number: 6 (lower is better)
Translates to: QFSHLVDYQEML*GRCHSELSDCH
Trigger: ATGACAATCGGATAGTTCTGAATGGCATCGACCTCAAAGCATTTCTTGATAGTCTACCAGATGTGAAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS CAA 72 bp ACAATTTTCACATCTGGTAGACTATCAAGAAATGCTTaGAGGTCGATGCCATTCAGAACTATCCGATTGTCA +
Preference number: 6 (lower is better)
Translates to: TIFTSGRLSRNA*RSMPFRTIRLS
Trigger: TGACAATCGGATAGTTCTGAATGGCATCGACCTCAAAGCATTTCTTGATAGTCTACCAGATGTGAAAATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS TCA 72 bp AGCTTCAAGTCTTTTGGATGTTCATATGGTGGTTTATaGAGAACATTAATCTTATCTAAGCACAGGTTGCCG +
Preference number: 6 (lower is better)
Translates to: SFKSFGCSYGGL*RTLILSKHRLP
Trigger: CGGCAACCTGTGCTTAGATAAGATTAATGTTCTTCATAAACCACCATATGAACATCCAAAAGACTTGAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373701.7
ENST00000373719.8
ENST00000488174.5
CDS TCA 72 bp TCAGTTTCAAAGGACTGTTTTGTGAAGATAGCTCAATaGAGAGTTGAAGACTTGGCAAAAAGTACAAGTTTT +
Preference number: 6 (lower is better)
Translates to: SVSKDCFVKIAQ*RVEDLAKSTSF
Trigger: AAAACTTGTACTTTTTGCCAAGTCTTCAACTCTTCATTGAGCTATCTTCACAAAACAGTCCTTTGAAACTGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488174.5