RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OGFOD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000111325

Ensembl transcript IDs: ENST00000228922.11, ENST00000397389.6, ENST00000406539.6, ENST00000420319.6, ENST00000454694.6, ENST00000535970.5, ENST00000536150.5, ENST00000536439.1, ENST00000536615.5, ENST00000537966.5, ENST00000538628.5, ENST00000538755.5, ENST00000540324.5, ENST00000541360.5, ENST00000542037.1, ENST00000542117.5, ENST00000542940.5, ENST00000544358.5, ENST00000544852.5, ENST00000545033.5, ENST00000545056.5, ENST00000545317.5, ENST00000545396.5, ENST00000545612.5, ENST00000545976.1

Found 619 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGGGCCGGGCTCCATGCAGCTGGCCGCCACGGTGGAGGACACCCTaGCCCACCACGTGCTCCACCTCCAGGGGCTCCGTCAGGGCTGTG +
Preference number: 1 (lower is better)
Translates to: KGRAPCSWPPRWRTP*PTTCSTSRGSVRAV
Trigger: CACAGCCCTGACGGAGCCCCTGGAGGTGGAGCACGTGGTGGGCCAGGGTGTCCTCCACCGTGGCGGCCAGCTGCATGGAGCCCGGCCCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR CCA 90 bp TCACCAGTGCCCAAGGGCCGGGCTCCATGCAGCTGGCCGCCACGGTaGAGGACACCCTGGCCCACCACGTGCTCCACCTCCAGGGGCTCC +
Preference number: 1 (lower is better)
Translates to: SPVPKGRAPCSWPPR*RTPWPTTCSTSRGS
Trigger: GGAGCCCCTGGAGGTGGAGCACGTGGTGGGCCAGGGTGTCCTCCACCGTGGCGGCCAGCTGCATGGAGCCCGGCCCTTGGGCACTGGTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR GCA 90 bp CCATGCAGCTGGCCGCCACGGTGGAGGACACCCTGGCCCACCACGTaGTCCACCTCCAGGGGCTCCGTCAGGGCTGTGGGTGCCTGGAAG +
Preference number: 1 (lower is better)
Translates to: PCSWPPRWRTPWPTT*STSRGSVRAVGAWK
Trigger: CTTCCAGGCACCCACAGCCCTGACGGAGCCCCTGGAGGTGGAGCACGTGGTGGGCCAGGGTGTCCTCCACCGTGGCGGCCAGCTGCATGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR GCA 90 bp AGCCGGCCCCCGCCACAGTCAGGGTACAGCAGGGCCATCAGCGGCTaGAGGAAGCGCTCCCGCAGTGGTGTCATCAGCGGCTCGTCCAGC +
Preference number: 1 (lower is better)
Translates to: SRPPPQSGYSRAISG*RKRSRSGVISGSSS
Trigger: GCTGGACGAGCCGCTGATGACACCACTGCGGGAGCGCTTCCTGCAGCCGCTGATGGCCCTGCTGTACCCTGACTGTGGCGGGGGCCGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR CCA 90 bp AGGTTCCAACGCTCACCAGTGCCCAAGGGCCGGGCTCCATGCAGCTaGCCGCCACGGTGGAGGACACCCTGGCCCACCACGTGCTCCACC +
Preference number: 1 (lower is better)
Translates to: RFQRSPVPKGRAPCS*PPRWRTPWPTTCST
Trigger: GGTGGAGCACGTGGTGGGCCAGGGTGTCCTCCACCGTGGCGGCCAGCTGCATGGAGCCCGGCCCTTGGGCACTGGTGAGCGTTGGAACCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR GCA 90 bp CAGCAGAGGCTCGGAGCCAGACGACAAGGTTCCAACGCTCACCAGTaGCCAAGGGCCGGGCTCCATGCAGCTGGCCGCCACGGTGGAGGA +
Preference number: 1 (lower is better)
Translates to: QQRLGARRQGSNAHQ*PRAGLHAAGRHGGG
Trigger: TCCTCCACCGTGGCGGCCAGCTGCATGGAGCCCGGCCCTTGGGCACTGGTGAGCGTTGGAACCTTGTCGTCTGGCTCCGAGCCTCTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR CCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTaGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGCTGAG +
Preference number: 1 (lower is better)
Translates to: GPLIQEPVTGGVGTL*YCGLCLELSVGPAE
Trigger: CTCAGCTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR CCA 90 bp CACCGAAGCCCTCATCGTCCACCAGGTCGGGCTCACGGCAGCACATaGGACAGAGGCTGTTGCGCACAGCAGAGGCTCGGAGCCAGACGA +
Preference number: 1 (lower is better)
Translates to: HRSPHRPPGRAHGST*DRGCCAQQRLGARR
Trigger: TCGTCTGGCTCCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCATGTGCTGCCGTGAGCCCGACCTGGTGGACGATGAGGGCTTCGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR GCA 90 bp CGTCCACCAGGTCGGGCTCACGGCAGCACATGGGACAGAGGCTGTTaGGCACAGCAGAGGCTCGGAGCCAGACGACAAGGTTCCAACGCT +
Preference number: 1 (lower is better)
Translates to: RPPGRAHGSTWDRGC*AQQRLGARRQGSNA
Trigger: AGCGTTGGAACCTTGTCGTCTGGCTCCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCATGTGCTGCCGTGAGCCCGACCTGGTGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR CCA 90 bp TTATTCACTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTaGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTC +
Preference number: 1 (lower is better)
Translates to: LFTPLWPPHPGASNR*CGHTVVLWALPGAL
Trigger: GAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR CCA 90 bp TGCCATGGAGATGAGGCCTTTGCTTTTCAGGGTGTCTCCAGCCGCTaGAGAAGGCCCTTGAGGTCTGCGTCTGGGGACACGCTGTACTCA +
Preference number: 1 (lower is better)
Translates to: CHGDEAFAFQGVSSR*RRPLRSASGDTLYS
Trigger: TGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACACCCTGAAAAGCAAAGGCCTCATCTCCATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR GCA 90 bp CATCTGTGCTCTCTGGAGGCTTCCCTTGGCTACTGGAAGGCACCCTaGCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGC +
Preference number: 1 (lower is better)
Translates to: HLCSLEASLGYWKAP*PGDKCLGSYSLLSG
Trigger: GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTTCCAGTAGCCAAGGGAAGCCTCCAGAGAGCACAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
3UTR CCA 90 bp AAACGAAGGCACCAAAAGGTGAAGGCTCACCTAAAGCCACACAGCTaGAAGTGGCAGAAGCAGAATGGGAACCCGGGCAGCCTGGTTCCT +
Preference number: 1 (lower is better)
Translates to: KRRHQKVKAHLKPHS*KWQKQNGNPGSLVP
Trigger: AGGAACCAGGCTGCCCGGGTTCCCATTCTGCTTCTGCCACTTCCAGCTGTGTGGCTTTAGGTGAGCCTTCACCTTTTGGTGCCTTCGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
3UTR TCA 90 bp GGCAGCATCTTTGCCCATAGAATGACCCAGAAGCTGGCACACCGTTaGGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCC +
Preference number: 1 (lower is better)
Translates to: GSIFAHRMTQKLAHR*AKKCSRLRGFYFCP
Trigger: GGGGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCAGCTTCTGGGTCATTCTATGGGCAAAGATGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR GCA 90 bp GGCTCGGAGCCAGACGACAAGGTTCCAACGCTCACCAGTGCCCAAGGGCCGGGCCGTCAGGGCTGTGGGTaGCTGGAAGAGGCCCCCAAA +
Preference number: 2 (lower is better)
Translates to: GSEPDDKVPTLTSAQGPGRQGCG*LEEAPK
Trigger: TTTGGGGGCCTCTTCCAGGCACCCACAGCCCTGACG...GCCCGGCCCTTGGGCACTGGTGAGCGTTGGAACCTTGTCGTCTGGCTCCGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR CCA 90 bp CTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGGCCTGGAGCTCTCCGTaGGGCCAGCTGAGGCTGGAC +
Preference number: 2 (lower is better)
Translates to: LSGPLIQEPVTGGVGTLWAWSSP*GQLRLD
Trigger: GTCCAGCCTCAGCTGGCCCCACGGAGAGCTCCAGGC...CCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp CTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGGCCTGGAGCTCTCCGTaGGGCCAGCTGAGGCTGGAC +
Preference number: 2 (lower is better)
Translates to: LLSGPLIQEPVTGGVGTLAWSSP*GQLRLD
Trigger: GTCCAGCCTCAGCTGGCCCCACGGAGAGCTCCAGGC...CAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp GCCCAAGCAAGCTCAGGTGAGCGCACATACATCCACCGTGGCGGGCTCCTCTCGGCTCCGTCAGGGCTGTaGGTGCCTGGAAGAGGCCCC +
Preference number: 2 (lower is better)
Translates to: AQASSGERTYIHRGGLLSAPSGL*VPGRGP
Trigger: GGGGCCTCTTCCAGGCACCCACAGCCCTGACGGAGC...CGAGAGGAGCCCGCCACGGTGGATGTATGTGCGCTCACCTGAGCTTGCTTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR CCA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCAACTGTGGGCTCTGCCTaGAGCTCTCCGTGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPTVGSA*SSPWGQ
Trigger: CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGT...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCAGGGCAGCCTGGTTCCTaGCCCTGCCATTCACCCCTC +
Preference number: 2 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPGQPGS*PCHSPL
Trigger: GAGGGGTGAATGGCAGGGCCAGGAACCAGGCTGCCC...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
3UTR CAA 90 bp TCGTCCACCAGGTCGGGCTCACGGCAGCACATGGGACAGAGGCTGTaGCGCACAGCAGAGGCTCGGAGCCAGACGACAAGGTTCCAACGC +
Preference number: 2 (lower is better)
Translates to: SSTRSGSRQHMGQRL*RTAEARSQTTRFQR
Trigger: GCGTTGGAACCTTGTCGTCTGGCTCCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCATGTGCTGCCGTGAGCCCGACCTGGTGGACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR TCA 90 bp AGGCTCGGAGCCAGACGACAAGGTTCCAACGCTCACCAGTGCCCAAGGGCCGGGGGCAGAAGGGCGCTGTaGAAACAGGCACCCGGTAGA +
Preference number: 2 (lower is better)
Translates to: RLGARRQGSNAHQCPRAGGRRAL*KQAPGR
Trigger: TCTACCGGGTGCCTGTTTTCACAGCGCCCTTCTGCC...CCCGGCCCTTGGGCACTGGTGAGCGTTGGAACCTTGTCGTCTGGCTCCGAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR GCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTAACGGAGCCCTCACCTaGCTGCCACCCCCACACTGG +
Preference number: 2 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCNGALT*LPPPHW
Trigger: CCAGTGTGGGGGTGGCAGGCAGGTGAGGGCTCCGTT...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR GCA 90 bp GGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCTGAAGCCACTTCCTTaGCCAGCTGCTCCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: GGVGTLWYCGLCLELSVGLKPLP*PAAPSP
Trigger: AGGGGAGGGAGCAGCTGGGCAAGGAAGTGGCTTCAG...CCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR GCA 90 bp TCAGCGGCTGCAGGAAGCGCTCCCGCAGTGGTGTCATCAGCGGCTCGTCCAGCCAAGGCCCTTGAGGTCTaGGTCTGGGGACACGCTGTA +
Preference number: 2 (lower is better)
Translates to: SAAAGSAPAVVSSAARPAKALEV*VWGHAV
Trigger: TACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTT...GGCTGGACGAGCCGCTGATGACACCACTGCGGGAGCGCTTCCTGCAGCCGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR GCA 90 bp TTCACTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACAGGGCCATCAGCGGCTaGAGGAAGCGCTCCCGCAGT +
Preference number: 2 (lower is better)
Translates to: FTPLWPPHPGASNRWCGHRAISG*RKRSRS
Trigger: ACTGCGGGAGCGCTTCCTGCAGCCGCTGATGGCCCT...GTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR TCA 90 bp TTCACTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACGCTGGAGAAGGCCCTTaGGGTCTGCGTCTGGGGACA +
Preference number: 2 (lower is better)
Translates to: FTPLWPPHPGASNRWCGHAGEGP*GLRLGT
Trigger: TGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGC...GTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR GCA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCACTGAAGCCACTTCCTTaGCCAGCTGCTCCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPLKPLP*PAAPSP
Trigger: AGGGGAGGGAGCAGCTGGGCAAGGAAGTGGCTTCAG...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR GCA 90 bp CTCGGAGCCAGACGACAAGGTTCCAACGCTCACCAGTGCCCAAGGGCCGGGCTCCAGGCACCCGGTAGATaGGCTTCTCCTCTGTGCCAT +
Preference number: 2 (lower is better)
Translates to: LGARRQGSNAHQCPRAGLQAPGR*ASPLCH
Trigger: ATGGCACAGAGGAGAAGCGCATCTACCGGGTGCCTG...GAGCCCGGCCCTTGGGCACTGGTGAGCGTTGGAACCTTGTCGTCTGGCTCCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR CCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCACACTGTGGTACTGTaGGCTCTGCCTGGAGCTCTC +
Preference number: 2 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGHTVVL*ALPGAL
Trigger: GAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTG...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCGGAGCCAGTAACCGGTaGTGTGGGCACACTGTGGTA +
Preference number: 2 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGGASNR*CGHTVV
Trigger: TACCACAGTGTGCCCACACCACCGGTTACTGGCTCC...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCATCTTCCAGCAGGGCCTaGCAGAAGGGCGCTGTGAAA +
Preference number: 2 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPSSSRA*QKGAVK
Trigger: TTTCACAGCGCCCTTCTGCCAGGCCCTGCTGGAAGA...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR CCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGAAGCGCTCCCGCAGTaGTGTCATCAGCGGCTCGTC +
Preference number: 2 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCEALPQ*CHQRLV
Trigger: GACGAGCCGCTGATGACACCACTGCGGGAGCGCTTC...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR GCA 90 bp GTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCCTGAAGCCACTTCCTTaGCCAGCTGCTCCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: VTGGVGTLWYCGLCLELSLKPLP*PAAPSP
Trigger: AGGGGAGGGAGCAGCTGGGCAAGGAAGTGGCTTCAG...GGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR GCA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACCTGAAGCCACTTCCTTaGCCAGCTGCTCCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYLKPLP*PAAPSP
Trigger: AGGGGAGGGAGCAGCTGGGCAAGGAAGTGGCTTCAG...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR GCA 90 bp GGCTCGGAGCCAGACGACAAGGTTCCAACGCTCACCAGTGCCCAAGGGCCGGGCGAGGGTTCACATCTGTaGTCTCTGGAGGCTTCCCTT +
Preference number: 2 (lower is better)
Translates to: GSEPDDKVPTLTSAQGPGEGSHL*SLEASL
Trigger: AAGGGAAGCCTCCAGAGAGCACAGATGTGAACCCTC...GCCCGGCCCTTGGGCACTGGTGAGCGTTGGAACCTTGTCGTCTGGCTCCGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR GCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCTGCCATCTAGAAGATaGTACTGGTGGCCCACCCGA +
Preference number: 2 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGLPSRR*YWWPTR
Trigger: TCGGGTGGGCCACCAGTAGCATCTTCTAGATGGCAG...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
3UTR-3UTR GCA 90 bp CTCGGAGCCAGACGACAAGGTTCCAACGCTCACCAGTGCCCAAGGGCCGGGCTCTCCGATTGCTCGAAGTaGTCCAGCTCTTCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: LGARRQGSNAHQCPRAGLSDCSK*SSSSSR
Trigger: CCTGCTGGAAGAGCTGGAGCACTTCGAGCAATCGGA...GAGCCCGGCCCTTGGGCACTGGTGAGCGTTGGAACCTTGTCGTCTGGCTCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR CCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGTGTGGGCACACTGTaGTACTGTGGGCTCTGCCTG +
Preference number: 2 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCGVGTL*YCGLCL
Trigger: CAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp AACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGTGTGGGCACACTGTaGTACTGTGGGCTCTGCCTG +
Preference number: 2 (lower is better)
Translates to: NRWCGHTVVLWALPGALRGVGTL*YCGLCL
Trigger: CAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC...ACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR TCA 90 bp GTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGTCTTTGCCCATAGAATaGCCCAGAAGCTGGCACACC +
Preference number: 2 (lower is better)
Translates to: VWAHCGTVGSAWSSPWGQSLPIE*PRSWHT
Trigger: GGTGTGCCAGCTTCTGGGTCATTCTATGGGCAAAGA...CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR TCA 90 bp CCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTCCTCCGTGGGGCCAGCTaGGGCTGGACGTCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: PCPGDKCLGSYSLLSGPLLRGAS*GWTSSE
Trigger: TTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAG...GAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR TCA 90 bp AACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTCCAAGCAAGCTCAGGTaGGCGCACATACATCCACCG +
Preference number: 2 (lower is better)
Translates to: NRWCGHTVVLWALPGALRPSKLR*AHIHPP
Trigger: CGGTGGATGTATGTGCGCTCACCTGAGCTTGCTTGG...ACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR GCA 90 bp GCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCAACGGAGCCCTCACCTaGCTGCCACCCCCACACTGG +
Preference number: 2 (lower is better)
Translates to: APCPGDKCLGSYSLLSGPNGALT*LPPPHW
Trigger: CCAGTGTGGGGGTGGCAGGCAGGTGAGGGCTCCGTT...GGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR GCA 90 bp CCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTCAACGGAGCCCTCACCTaGCTGCCACCCCCACACTGG +
Preference number: 2 (lower is better)
Translates to: PCPGDKCLGSYSLLSGPLNGALT*LPPPHW
Trigger: CCAGTGTGGGGGTGGCAGGCAGGTGAGGGCTCCGTT...GAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR GCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCTACTGGAAGGCACCCTaGCCTGGAGATAAGTGTCTG +
Preference number: 2 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGYWKAP*PGDKCL
Trigger: CAGACACTTATCTCCAGGGCAGGGTGCCTTCCAGTA...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR GCA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCACTGCCATCTAGAAGATaGTACTGGTGGCCCACCCGA +
Preference number: 2 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPLPSRR*YWWPTR
Trigger: TCGGGTGGGCCACCAGTAGCATCTTCTAGATGGCAG...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
3UTR-3UTR GCA 90 bp CGGTGCGTATTTGACCACAAAGGCCCGGTGGCTGTCGAGCCGGCCCCCGCCACATTAGGCATGTCCGATTaGTCGAAGTGCTCCAGCTCT +
Preference number: 2 (lower is better)
Translates to: RCVFDHKGPVAVEPAPATLGMSD*SKCSSS
Trigger: AGAGCTGGAGCACTTCGAGCAATCGGACATGCCTAA...TGTGGCGGGGGCCGGCTCGACAGCCACCGGGCCTTTGTGGTCAAATACGCACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR CCA 90 bp GCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCACTGTGGGCTCTGCCTaGAGCTCTCCGTGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: APCPGDKCLGSYSLLSGPTVGSA*SSPWGQ
Trigger: CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGT...GGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp CCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTCACTGTGGGCTCTGCCTaGAGCTCTCCGTGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: PCPGDKCLGSYSLLSGPLTVGSA*SSPWGQ
Trigger: CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGT...GAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp AACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTCACACTGTGGTACTGTaGGCTCTGCCTGGAGCTCTC +
Preference number: 2 (lower is better)
Translates to: NRWCGHTVVLWALPGALRHTVVL*ALPGAL
Trigger: GAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTG...ACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTCACACTGTGGTACTGTaGGCTCTGCCTGGAGCTCTC +
Preference number: 2 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCHTVVL*ALPGAL
Trigger: GAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTG...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGAGCCAGTAACCGGTaGTGTGGGCACACTGTGGTA +
Preference number: 2 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCGASNR*CGHTVV
Trigger: TACCACAGTGTGCCCACACCACCGGTTACTGGCTCC...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCATTATTCACTCCTCTCTaGCCCCCTCATCCAGGAGCC +
Preference number: 2 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPLFTPL*PPHPGA
Trigger: GGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAATAA...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTTCTGGAGGCTTCCCTTaGCTACTGGAAGGCACCCTG +
Preference number: 2 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCSGGFP*LLEGTL
Trigger: CAGGGTGCCTTCCAGTAGCCAAGGGAAGCCTCCAGA...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp AACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTTCTGGAGGCTTCCCTTaGCTACTGGAAGGCACCCTG +
Preference number: 2 (lower is better)
Translates to: NRWCGHTVVLWALPGALRSGGFP*LLEGTL
Trigger: CAGGGTGCCTTCCAGTAGCCAAGGGAAGCCTCCAGA...ACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp GTGAGCGCACATACATCCACCGTGGCGGGCTCCTCTCGGGTGAAGCCATCACCGTCTAGAAGATGCTACTaGTGGCCCACCCGAGTCCAC +
Preference number: 2 (lower is better)
Translates to: VSAHTSTVAGSSRVKPSPSRRCY*WPTRVH
Trigger: GTGGACTCGGGTGGGCCACCAGTAGCATCTTCTAGA...CGGTGATGGCTTCACCCGAGAGGAGCCCGCCACGGTGGATGTATGTGCGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR GCA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCAGAGGGTTCACATCTGTaGTCTCTGGAGGCTTCCCTT +
Preference number: 2 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPEGSHL*SLEASL
Trigger: AAGGGAAGCCTCCAGAGAGCACAGATGTGAACCCTC...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp TGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCGGGCTCCATGCAGCTaGCCGCCACGGTGGAGGACA +
Preference number: 2 (lower is better)
Translates to: WHTVEPRSAVGCGDFISARAPCS*PPRWRT
Trigger: TGTCCTCCACCGTGGCGGCCAGCTGCATGGAGCCCG...GGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR TCA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTCTTTGCCCATAGAATaGCCCAGAAGCTGGCACACC +
Preference number: 2 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYSLPIE*PRSWHT
Trigger: GGTGTGCCAGCTTCTGGGTCATTCTATGGGCAAAGA...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR TCA 90 bp ACGAAGGCACCAAAAGGTGAAGGCTCACCTAAAGCCACACAGCTGGAAGTGGCACTCCGTGGGGCCAGCTaGGGCTGGACGTCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: TKAPKGEGSPKATQLEVALRGAS*GWTSSE
Trigger: TTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAG...TGCCACTTCCAGCTGTGTGGCTTTAGGTGAGCCTTCACCTTTTGGTGCCTTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
3UTR-3UTR GCA 90 bp TGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCAACGGAGCCCTCACCTaGCTGCCACCCCCACACTGG +
Preference number: 2 (lower is better)
Translates to: WHTVEPRSAVGCGDFISANGALT*LPPPHW
Trigger: CCAGTGTGGGGGTGGCAGGCAGGTGAGGGCTCCGTT...GGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR GCA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCAACGGAGCCCTCACCTaGCTGCCACCCCCACACTGG +
Preference number: 2 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGNGALT*LPPPHW
Trigger: CCAGTGTGGGGGTGGCAGGCAGGTGAGGGCTCCGTT...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR GCA 90 bp GCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTGAAGCCACTTCCTTaGCCAGCTGCTCCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: APCPGDKCLGSYSLLSGPLKPLP*PAAPSP
Trigger: AGGGGAGGGAGCAGCTGGGCAAGGAAGTGGCTTCAG...GGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp CCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTCGGTGTGGGCACACTGTaGTACTGTGGGCTCTGCCTG +
Preference number: 2 (lower is better)
Translates to: PCPGDKCLGSYSLLSGPLGVGTL*YCGLCL
Trigger: CAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC...GAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp GCGCCCCCTGTGAAGACCTTGCCCAAGGCCACATTGAGGGTGAGCTCGGCATTATTATTCACTCCTCTCTaGCCCCCTCATCCAGGAGCC +
Preference number: 2 (lower is better)
Translates to: APPVKTLPKATLRVSSALLFTPL*PPHPGA
Trigger: GGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAATAA...TAATGCCGAGCTCACCCTCAATGTGGCCTTGGGCAAGGTCTTCACAGGGGGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR CCA 90 bp CAAGCAAGCTCAGGTGAGCGCACATACATCCACCGTGGCGGGCTCCTCTCGGGTCCACACAGCTGGAAGTaGCAGAAGCAGAATGGGAAC +
Preference number: 2 (lower is better)
Translates to: QASSGERTYIHRGGLLSGPHSWK*QKQNGN
Trigger: GTTCCCATTCTGCTTCTGCCACTTCCAGCTGTGTGG...ACCCGAGAGGAGCCCGCCACGGTGGATGTATGTGCGCTCACCTGAGCTTGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR CCA 90 bp GCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCACACTGTGGTACTGTaGGCTCTGCCTGGAGCTCTC +
Preference number: 2 (lower is better)
Translates to: APCPGDKCLGSYSLLSGPHTVVL*ALPGAL
Trigger: GAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTG...GGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp CCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTCGGAGCCAGTAACCGGTaGTGTGGGCACACTGTGGTA +
Preference number: 2 (lower is better)
Translates to: PCPGDKCLGSYSLLSGPLGASNR*CGHTVV
Trigger: TACCACAGTGTGCCCACACCACCGGTTACTGGCTCC...GAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp GCACCCGGTAGATGCGCTTCTCCTCTGTGCCATGGAGATGAGGCCTTTGCTTTTGGTGTCTCCAGCCGCTaGAGAAGGCCCTTGAGGTCT +
Preference number: 2 (lower is better)
Translates to: APGRCASPLCHGDEAFAFGVSSR*RRPLRS
Trigger: AGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACACC...AAAAGCAAAGGCCTCATCTCCATGGCACAGAGGAGAAGCGCATCTACCGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR CCA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCGGTGTGGGCACACTGTaGTACTGTGGGCTCTGCCTG +
Preference number: 2 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGGVGTL*YCGLCL
Trigger: CAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp AGGCTCGGAGCCAGACGACAAGGTTCCAACGCTCACCAGTGCCCAAGGGCCGGGCTGGAGATAAGTGTCTaGGAAGTTATTCACTCCTCT +
Preference number: 2 (lower is better)
Translates to: RLGARRQGSNAHQCPRAGLEISV*EVIHSS
Trigger: AGAGGAGTGAATAACTTCCCAGACACTTATCTCCAG...CCCGGCCCTTGGGCACTGGTGAGCGTTGGAACCTTGTCGTCTGGCTCCGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR CCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTCTAAAGCCACACAGCTaGAAGTGGCAGAAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCLKPHS*KWQKQN
Trigger: ATTCTGCTTCTGCCACTTCCAGCTGTGTGGCTTTAG...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
3UTR-3UTR TCA 90 bp TGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCGGTGATGCCTGCTGCTaGGGGTTCACATCTGTGCTC +
Preference number: 2 (lower is better)
Translates to: WHTVEPRSAVGCGDFISAGDACC*GFTSVL
Trigger: GAGCACAGATGTGAACCCTCAGCAGCAGGCATCACC...GGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCAGAAGATGCTACTGGTaGCCCACCCGAGTCCACTGG +
Preference number: 2 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGRRCYW*PTRVHW
Trigger: CCAGTGGACTCGGGTGGGCCACCAGTAGCATCTTCT...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp TGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCTTATTCACTCCTCTCTaGCCCCCTCATCCAGGAGCC +
Preference number: 2 (lower is better)
Translates to: WHTVEPRSAVGCGDFISALFTPL*PPHPGA
Trigger: GGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAATAA...GGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCTTATTCACTCCTCTCTaGCCCCCTCATCCAGGAGCC +
Preference number: 2 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGLFTPL*PPHPGA
Trigger: GGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAATAA...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR TCA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCTCTTTGCCCATAGAATaGCCCAGAAGCTGGCACACC +
Preference number: 2 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGSLPIE*PRSWHT
Trigger: GGTGTGCCAGCTTCTGGGTCATTCTATGGGCAAAGA...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR CCA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCACATCTGTGCTCTCTaGAGGCTTCCCTTGGCTACT +
Preference number: 2 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGHICAL*RLPLAT
Trigger: AGTAGCCAAGGGAAGCCTCCAGAGAGCACAGATGTG...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
3UTR CCA 72 bp CGCTCACCAGTGCCCAAGGGCCGGGCTCCATGCAGCTaGCCGCCACGGTGGAGGACACCCTGGCCCACCACG +
Preference number: 3 (lower is better)
Translates to: RSPVPKGRAPCS*PPRWRTPWPTT
Trigger: CGTGGTGGGCCAGGGTGTCCTCCACCGTGGCGGCCAGCTGCATGGAGCCCGGCCCTTGGGCACTGGTGAGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR GCA 72 bp TGGCCGCCACGGTGGAGGACACCCTGGCCCACCACGTaGTCCACCTCCAGGGGCTCCGTCAGGGCTGTGGGT +
Preference number: 3 (lower is better)
Translates to: WPPRWRTPWPTT*STSRGSVRAVG
Trigger: ACCCACAGCCCTGACGGAGCCCCTGGAGGTGGAGCACGTGGTGGGCCAGGGTGTCCTCCACCGTGGCGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR CCA 72 bp GCTCCATGCAGCTGGCCGCCACGGTGGAGGACACCCTaGCCCACCACGTGCTCCACCTCCAGGGGCTCCGTC +
Preference number: 3 (lower is better)
Translates to: APCSWPPRWRTP*PTTCSTSRGSV
Trigger: GACGGAGCCCCTGGAGGTGGAGCACGTGGTGGGCCAGGGTGTCCTCCACCGTGGCGGCCAGCTGCATGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR TCA 72 bp GGCAGCCCAGCTCCAGGTCCTGGCCCGGTGCGTATTTaGCCACAAAGGCCCGGTGGCTGTCGAGCCGGCCCC +
Preference number: 3 (lower is better)
Translates to: GSPAPGPGPVRI*PQRPGGCRAGP
Trigger: GGGGCCGGCTCGACAGCCACCGGGCCTTTGTGGTCAAATACGCACCGGGCCAGGACCTGGAGCTGGGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR GCA 72 bp CCGCCACAGTCAGGGTACAGCAGGGCCATCAGCGGCTaGAGGAAGCGCTCCCGCAGTGGTGTCATCAGCGGC +
Preference number: 3 (lower is better)
Translates to: PPQSGYSRAISG*RKRSRSGVISG
Trigger: GCCGCTGATGACACCACTGCGGGAGCGCTTCCTGCAGCCGCTGATGGCCCTGCTGTACCCTGACTGTGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR CCA 72 bp TCCTGGCCCGGTGCGTATTTGACCACAAAGGCCCGGTaGCTGTCGAGCCGGCCCCCGCCACAGTCAGGGTAC +
Preference number: 3 (lower is better)
Translates to: SWPGAYLTTKAR*LSSRPPPQSGY
Trigger: GTACCCTGACTGTGGCGGGGGCCGGCTCGACAGCCACCGGGCCTTTGTGGTCAAATACGCACCGGGCCAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR CCA 72 bp CCTCATCGTCCACCAGGTCGGGCTCACGGCAGCACATaGGACAGAGGCTGTTGCGCACAGCAGAGGCTCGGA +
Preference number: 3 (lower is better)
Translates to: PHRPPGRAHGST*DRGCCAQQRLG
Trigger: TCCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCATGTGCTGCCGTGAGCCCGACCTGGTGGACGATGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR CAA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTCGCTGGAGAAGGCCCTaGAGGTCTGCGTCTGGGGAC +
Preference number: 3 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCRWRRP*RSASGD
Trigger: GTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCG...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR TCA 72 bp GCGCACATACATCCACCGTGGCGGGCTCCTCTCGGGTaGAGCCATCACCGAAGCCCTCATCGTCCACCAGGT +
Preference number: 3 (lower is better)
Translates to: AHIHPPWRAPLG*SHHRSPHRPPG
Trigger: ACCTGGTGGACGATGAGGGCTTCGGTGATGGCTTCACCCGAGAGGAGCCCGCCACGGTGGATGTATGTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR CCA 72 bp ATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTaGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGG +
Preference number: 3 (lower is better)
Translates to: IQEPVTGGVGTL*YCGLCLELSVG
Trigger: CCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR CCA 72 bp CCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTaGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCT +
Preference number: 3 (lower is better)
Translates to: PLWPPHPGASNR*CGHTVVLWALP
Trigger: AGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR-3UTR CAA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCACTCTGGAGGCTTCCCTaGGCTACTGGAAGGCACCCT +
Preference number: 3 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPLWRLP*ATGRHP
Trigger: AGGGTGCCTTCCAGTAGCCAAGGGAAGCCTCCAGAG...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
3UTR CCA 72 bp GATGAGGCCTTTGCTTTTCAGGGTGTCTCCAGCCGCTaGAGAAGGCCCTTGAGGTCTGCGTCTGGGGACACG +
Preference number: 3 (lower is better)
Translates to: DEAFAFQGVSSR*RRPLRSASGDT
Trigger: CGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACACCCTGAAAAGCAAAGGCCTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR CAA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCATGGAGATGAGGCCTTaGCTTTTCAGGGTGTCTCCA +
Preference number: 3 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGMEMRP*LFRVSP
Trigger: TGGAGACACCCTGAAAAGCAAAGGCCTCATCTCCAT...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR CAA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTCTTAGGCATGTCCGATaGCTCGAAGTGCTCCAGCTC +
Preference number: 3 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCLRHVR*LEVLQL
Trigger: GAGCTGGAGCACTTCGAGCAATCGGACATGCCTAAG...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR GCA 72 bp TTCATGGTGTTGGGCCTCCCCTTAGGCATGTCCGATTaGTCGAAGTGCTCCAGCTCTTCCAGCAGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: FMVLGLPLGMSD*SKCSSSSSRAW
Trigger: CCAGGCCCTGCTGGAAGAGCTGGAGCACTTCGAGCAATCGGACATGCCTAAGGGGAGGCCCAACACCATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR-3UTR CAA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCTCTGGAGGCTTCCCTaGGCTACTGGAAGGCACCCT +
Preference number: 3 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGLWRLP*ATGRHP
Trigger: AGGGTGCCTTCCAGTAGCCAAGGGAAGCCTCCAGAG...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
3UTR CCA 72 bp GCTACTGGAAGGCACCCTGCCCTGGAGATAAGTGTCTaGGAAGTTATTCACTCCTCTCTGGCCCCCTCATCC +
Preference number: 3 (lower is better)
Translates to: ATGRHPALEISV*EVIHSSLAPSS
Trigger: GGATGAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTTCCAGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
3UTR CCA 72 bp CACCAAAAGGTGAAGGCTCACCTAAAGCCACACAGCTaGAAGTGGCAGAAGCAGAATGGGAACCCGGGCAGC +
Preference number: 3 (lower is better)
Translates to: HQKVKAHLKPHS*KWQKQNGNPGS
Trigger: GCTGCCCGGGTTCCCATTCTGCTTCTGCCACTTCCAGCTGTGTGGCTTTAGGTGAGCCTTCACCTTTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
3UTR GCA 72 bp TCTCTGGAGGCTTCCCTTGGCTACTGGAAGGCACCCTaGCCTGGAGATAAGTGTCTGGGAAGTTATTCACTC +
Preference number: 3 (lower is better)
Translates to: SLEASLGYWKAP*PGDKCLGSYSL
Trigger: GAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTTCCAGTAGCCAAGGGAAGCCTCCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
3UTR TCA 72 bp TTTGCCCATAGAATGACCCAGAAGCTGGCACACCGTTaGGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTAT +
Preference number: 3 (lower is better)
Translates to: FAHRMTQKLAHR*AKKCSRLRGFY
Trigger: ATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCAGCTTCTGGGTCATTCTATGGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CCGGCCCCCGCCACAGTCAGGGTACAGCAGGGCCATCAGCGGCTGCAGGAAGCGAGCTGGCCGCCACGGTaGAGGACACCCTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: PAPATVRVQQGHQRLQEASWPPR*RTPWPT
Trigger: GGTGGGCCAGGGTGTCCTCCACCGTGGCGGCCAGCT...CGCTTCCTGCAGCCGCTGATGGCCCTGCTGTACCCTGACTGTGGCGGGGGCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR GCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCTCCTGCCCCAGCCGCTaGCGCCGCTCCACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGSCPSR*RRSTSC
Trigger: GCAGGAGGTGGAGCGGCGGCAGCGGCTGGGGCAGGA...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp CTCGGAGCCAGACGACAAGGTTCCAACGCTCACCAGTGCCCAAGGGCCGGGCTCTCCCGGCGCAGCTGCTaGTCGCCTCGGAAGCGCACG +
Preference number: 4 (lower is better)
Translates to: LGARRQGSNAHQCPRAGLSRRSC*SPRKRT
Trigger: CGTGCGCTTCCGAGGCGAGCAGCAGCTGCGCCGGGA...GAGCCCGGCCCTTGGGCACTGGTGAGCGTTGGAACCTTGTCGTCTGGCTCCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR GCA 90 bp CTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTCCTGCCCCAGCCGCTaGCGCCGCTCCACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LSGPLIQEPVTGGVGTLWSCPSR*RRSTSC
Trigger: GCAGGAGGTGGAGCGGCGGCAGCGGCTGGGGCAGGA...CCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp CTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTCCTGCCCCAGCCGCTaGCGCCGCTCCACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLSGPLIQEPVTGGVGTLSCPSR*RRSTSC
Trigger: GCAGGAGGTGGAGCGGCGGCAGCGGCTGGGGCAGGA...CAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCATCCTGCCCCAGCCGCTaGCGCCGCTCCACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPSCPSR*RRSTSC
Trigger: GCAGGAGGTGGAGCGGCGGCAGCGGCTGGGGCAGGA...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCCCTGGCCCACCACGTaGTCCACCTCCAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGPWPTT*STSRGS
Trigger: GGAGCCCCTGGAGGTGGAGCACGTGGTGGGCCAGGG...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCAAGGGCCGGGCTCCATaGAGCTGGCCGCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGKGRAP*SWPPRW
Trigger: CCACCGTGGCGGCCAGCTGCATGGAGCCCGGCCCTT...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGCTGAGAGCTGGCCGCCACGGTaGAGGACACCCTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: GTLWYCGLCLELSVGPAESWPPR*RTPWPT
Trigger: GGTGGGCCAGGGTGTCCTCCACCGTGGCGGCCAGCT...CTCAGCTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGAGCTGGCCGCCACGGTaGAGGACACCCTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: GGVGTLWYCGLCLELSVGSWPPR*RTPWPT
Trigger: GGTGGGCCAGGGTGTCCTCCACCGTGGCGGCCAGCT...CCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCAGCTCCTGGGCCGGGTTaGGACCGGCGGCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPAPGPG*DRRPPR
Trigger: ACGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGC...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp CTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGGCTCCTGGGCCGGGTTaGGACCGGCGGCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LSGPLIQEPVTGGVGTLWAPGPG*DRRPPR
Trigger: ACGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGC...CCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
3UTR CAA 72 bp TGGCAGCCCAGCTCCAGGTCCTGGCCCGGTGCGTATTaGACCACAAAGGCCCGGTGGCTGTCGAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: WQPSSRSWPGAY*TTKARWLSSRP
Trigger: GGGCCGGCTCGACAGCCACCGGGCCTTTGTGGTCAAATACGCACCGGGCCAGGACCTGGAGCTGGGCTGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR TCA 90 bp TCAGCGGCTGCAGGAAGCGCTCCCGCAGTGGTGTCATCAGCGGCTCGTCCAGCCCTCCGTGGGGCCAGCTaGGGCTGGACGTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SAAAGSAPAVVSSAARPALRGAS*GWTSSE
Trigger: TTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAG...GGCTGGACGAGCCGCTGATGACACCACTGCGGGAGCGCTTCCTGCAGCCGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR GCA 90 bp GCCCAAGCAAGCTCAGGTGAGCGCACATACATCCACCGTGGCGGGCTCCTCTCGCTAGCTGCTGACTCCTaGCCCAGCCGCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: AQASSGERTYIHRGGLLSLAADS*PSRCRR
Trigger: GCGGCGGCAGCGGCTGGGGCAGGAGTCAGCAGCTAG...CGAGAGGAGCCCGCCACGGTGGATGTATGTGCGCTCACCTGAGCTTGCTTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR GCA 90 bp CTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGCCCTGGCCCACCACGTaGTCCACCTCCAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LLSGPLIQEPVTGGVGTLPWPTT*STSRGS
Trigger: GGAGCCCCTGGAGGTGGAGCACGTGGTGGGCCAGGG...CAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp CTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGAAGGGCCGGGCTCCATaGAGCTGGCCGCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: LSGPLIQEPVTGGVGTLWKGRAP*SWPPRW
Trigger: CCACCGTGGCGGCCAGCTGCATGGAGCCCGGCCCTT...CCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGTCTACCCCGGGTCCCTaGCTGGCGCTTCCGGTCCCT +
Preference number: 4 (lower is better)
Translates to: GGVGTLWYCGLCLELSVGSTPGP*LALPVP
Trigger: AGGGACCGGAAGCGCCAGGCAGGGACCCGGGGTAGA...CCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp CTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGACCACAAAGGCCCGGTaGCTGTCGAGCCGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: LLSGPLIQEPVTGGVGTLTTKAR*LSSRPP
Trigger: CGGGGGCCGGCTCGACAGCCACCGGGCCTTTGTGGT...CAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCAACCACAAAGGCCCGGTaGCTGTCGAGCCGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPTTKAR*LSSRPP
Trigger: CGGGGGCCGGCTCGACAGCCACCGGGCCTTTGTGGT...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGGCTCCGTCAGGGCTGTaGGTGCCTGGAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GGVGTLWYCGLCLELSVGAPSGL*VPGRGP
Trigger: GGGGCCTCTTCCAGGCACCCACAGCCCTGACGGAGC...CCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGAGCTGGCCGCCACGGTaGAGGACACCCTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: LSGPLIQEPVTGGVGTLWSWPPR*RTPWPT
Trigger: GGTGGGCCAGGGTGTCCTCCACCGTGGCGGCCAGCT...CCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGCCTGGAGCTCTCCGTaGGGCCAGCTGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPAWSSP*GQLRLD
Trigger: GTCCAGCCTCAGCTGGCCCCACGGAGAGCTCCAGGC...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CGGTGCGTATTTGACCACAAAGGCCCGGTGGCTGTCGAGCCGGCCCCCGCCACAGGAACCCGGGCAGCCTaGTTCCTGGCCCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: RCVFDHKGPVAVEPAPATGTRAA*FLALPF
Trigger: GAATGGCAGGGCCAGGAACCAGGCTGCCCGGGTTCC...TGTGGCGGGGGCCGGCTCGACAGCCACCGGGCCTTTGTGGTCAAATACGCACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR CCA 90 bp GTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGCTCCTGGGCCGGGTTaGGACCGGCGGCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: VTGGVGTLWYCGLCLELSAPGPG*DRRPPR
Trigger: ACGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGC...GGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR TCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGGCTTTCCTAGCTGCTaGCTCCTGCCCCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPGFPSC*LLPQPL
Trigger: CAGCGGCTGGGGCAGGAGTCAGCAGCTAGGAAAGCC...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCGGCCCGGTGCGTATTTaGCCACAAAGGCCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGGPVRI*PQRPGG
Trigger: GCCACCGGGCCTTTGTGGTCAAATACGCACCGGGCC...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAACAGGGCGCCCCCTGTaGAGACCTTGCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPTGRPL*RPCPRP
Trigger: TGGCCTTGGGCAAGGTCTTCACAGGGGGCGCCCTGT...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCTCCGTGGGGCCAGCTaGGGCTGGACGTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: GGVGTLWYCGLCLELSVGLRGAS*GWTSSE
Trigger: TTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAG...CCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCTCCCGGCGCAGCTGCTaGTCGCCTCGGAAGCGCACG +
Preference number: 4 (lower is better)
Translates to: VTGGVGTLWYCGLCLELSSRRSC*SPRKRT
Trigger: CGTGCGCTTCCGAGGCGAGCAGCAGCTGCGCCGGGA...GGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228922.11
ENST00000540324.5
CDS-3UTR GCA 90 bp AACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTCTAGCTGCTGACTCCTaGCCCAGCCGCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: NRWCGHTVVLWALPGALRLAADS*PSRCRR
Trigger: GCGGCGGCAGCGGCTGGGGCAGGAGTCAGCAGCTAG...ACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp TTCACTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACCTAGCTGCTGACTCCTaGCCCAGCCGCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: FTPLWPPHPGASNRWCGHLAADS*PSRCRR
Trigger: GCGGCGGCAGCGGCTGGGGCAGGAGTCAGCAGCTAG...GTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTCTAGCTGCTGACTCCTaGCCCAGCCGCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCLAADS*PSRCRR
Trigger: GCGGCGGCAGCGGCTGGGGCAGGAGTCAGCAGCTAG...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAAGGGCCATCAGCGGCTaGAGGAAGCGCTCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPRAISG*RKRSRS
Trigger: ACTGCGGGAGCGCTTCCTGCAGCCGCTGATGGCCCT...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCAGGGCCATCAGCGGCTaGAGGAAGCGCTCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGRAISG*RKRSRS
Trigger: ACTGCGGGAGCGCTTCCTGCAGCCGCTGATGGCCCT...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp TTCACTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACCCCTGGCCCACCACGTaGTCCACCTCCAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: FTPLWPPHPGASNRWCGHPWPTT*STSRGS
Trigger: GGAGCCCCTGGAGGTGGAGCACGTGGTGGGCCAGGG...GTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTAAGGGCCGGGCTCCATaGAGCTGGCCGCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCKGRAP*SWPPRW
Trigger: CCACCGTGGCGGCCAGCTGCATGGAGCCCGGCCCTT...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp CTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTCTACCCCGGGTCCCTaGCTGGCGCTTCCGGTCCCT +
Preference number: 4 (lower is better)
Translates to: LSGPLIQEPVTGGVGTLWSTPGP*LALPVP
Trigger: AGGGACCGGAAGCGCCAGGCAGGGACCCGGGGTAGA...CCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACACCACAAAGGCCCGGTaGCTGTCGAGCCGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYTTKAR*LSSRPP
Trigger: CGGGGGCCGGCTCGACAGCCACCGGGCCTTTGTGGT...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGGCTCCGTCAGGGCTGTaGGTGCCTGGAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LSGPLIQEPVTGGVGTLWAPSGL*VPGRGP
Trigger: GGGGCCTCTTCCAGGCACCCACAGCCCTGACGGAGC...CCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGCGGGCTCCATGCAGCTaGCCGCCACGGTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: LSGPLIQEPVTGGVGTLWRAPCS*PPRWRT
Trigger: TGTCCTCCACCGTGGCGGCCAGCTGCATGGAGCCCG...CCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAACTGTGGGCTCTGCCTaGAGCTCTCCGTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPTVGSA*SSPWGQ
Trigger: CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGT...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGACTGTGGGCTCTGCCTaGAGCTCTCCGTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VWAHCGTVGSAWSSPWGQTVGSA*SSPWGQ
Trigger: CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGT...CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGCTGAGACTGTGGGCTCTGCCTaGAGCTCTCCGTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GTLWYCGLCLELSVGPAETVGSA*SSPWGQ
Trigger: CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGT...CTCAGCTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CCGGCCCCCGCCACAGTCAGGGTACAGCAGGGCCATCAGCGGCTGCAGGAAGCGAGAAGATGCTACTGGTaGCCCACCCGAGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: PAPATVRVQQGHQRLQEARRCYW*PTRVHW
Trigger: CCAGTGGACTCGGGTGGGCCACCAGTAGCATCTTCT...CGCTTCCTGCAGCCGCTGATGGCCCTGCTGTACCCTGACTGTGGCGGGGGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR CCA 90 bp GGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGGGGCAGCCTGGTTCCTaGCCCTGCCATTCACCCCTC +
Preference number: 4 (lower is better)
Translates to: GGVGTLWYCGLCLELSVGGQPGS*PCHSPL
Trigger: GAGGGGTGAATGGCAGGGCCAGGAACCAGGCTGCCC...CCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGGGGCAGCCTGGTTCCTaGCCCTGCCATTCACCCCTC +
Preference number: 4 (lower is better)
Translates to: VWAHCGTVGSAWSSPWGQGQPGS*PCHSPL
Trigger: GAGGGGTGAATGGCAGGGCCAGGAACCAGGCTGCCC...CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGCTGAGGGAACCCGGGCAGCCTaGTTCCTGGCCCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: GTLWYCGLCLELSVGPAEGTRAA*FLALPF
Trigger: GAATGGCAGGGCCAGGAACCAGGCTGCCCGGGTTCC...CTCAGCTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGGGAACCCGGGCAGCCTaGTTCCTGGCCCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: VWAHCGTVGSAWSSPWGQGTRAA*FLALPF
Trigger: GAATGGCAGGGCCAGGAACCAGGCTGCCCGGGTTCC...CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp TTCACTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACCGGTGGCGTTCCCAATaGACGCGGGAGGGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: FTPLWPPHPGASNRWCGHRWRSQ*TREGGV
Trigger: GACCCCGCCCTCCCGCGTCCATTGGGAACGCCACCG...GTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS-3UTR TCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGCTGGAGAAGGCCCTTaGGGTCTGCGTCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPAGEGP*GLRLGT
Trigger: TGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGC...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCAGGCCCGGTGCGTATTTaGCCACAAAGGCCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPGPVRI*PQRPGG
Trigger: GCCACCGGGCCTTTGTGGTCAAATACGCACCGGGCC...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp ACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGACAGGGCGCCCCCTGTaGAGACCTTGCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: TGGVGTLWYCGLCLELSVTGRPL*RPCPRP
Trigger: TGGCCTTGGGCAAGGTCTTCACAGGGGGCGCCCTGT...CACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GCAGCACATGGGACAGAGGCTGTTGCGCACAGCAGAGGCTCGGAGCCAGACGACACAGGGCGCCCCCTGTaGAGACCTTGCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: AAHGTEAVAHSRGSEPDDTGRPL*RPCPRP
Trigger: TGGCCTTGGGCAAGGTCTTCACAGGGGGCGCCCTGT...GTCGTCTGGCTCCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCATGTGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR TCA 90 bp CTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGCGGGCTCCTCTCGGGTaGAGCCATCACCGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LLSGPLIQEPVTGGVGTLRAPLG*SHHRSP
Trigger: AGGGCTTCGGTGATGGCTTCACCCGAGAGGAGCCCG...CAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCGTAGACCTCAGGCCGTaGCGGGTGGTAGGAACTCGC +
Preference number: 4 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGVDLRP*RVVGTR
Trigger: GCGAGTTCCTACCACCCGGCACGGCCTGAGGTCTAC...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCAAGGGCCATCAGCGGCTaGAGGAAGCGCTCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPRAISG*RKRSRS
Trigger: ACTGCGGGAGCGCTTCCTGCAGCCGCTGATGGCCCT...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGTCCAACGCTCACCAGTaGCCAAGGGCCGGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: VWAHCGTVGSAWSSPWGQSNAHQ*PRAGLH
Trigger: ATGGAGCCCGGCCCTTGGGCACTGGTGAGCGTTGGA...CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCGCCGCTCCACCTCCTaGTCAAGCTCGCCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: GGVGTLWYCGLCLELSVGRRSTS*SSSPGN
Trigger: GTTTCCTGGCGAGCTTGAGCAGGAGGTGGAGCGGCG...CCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536150.5
CDS-3UTR CCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCGAAGCGCTCCCGCAGTaGTGTCATCAGCGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGEALPQ*CHQRLV
Trigger: GACGAGCCGCTGATGACACCACTGCGGGAGCGCTTC...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTACCACAAAGGCCCGGTaGCTGTCGAGCCGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: PHPGASNRWCGHTVVLWATTKAR*LSSRPP
Trigger: CGGGGGCCGGCTCGACAGCCACCGGGCCTTTGTGGT...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCACCCAGCTCCAGGTCCTaGCCCGGTGCGTATTTGACC +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPPSSRS*PGAYLT
Trigger: GGTCAAATACGCACCGGGCCAGGACCTGGAGCTGGG...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGCTCCGTCAGGGCTGTaGGTGCCTGGAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCAPSGL*VPGRGP
Trigger: GGGGCCTCTTCCAGGCACCCACAGCCCTGACGGAGC...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp TTCACTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACGCTCCGTCAGGGCTGTaGGTGCCTGGAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: FTPLWPPHPGASNRWCGHAPSGL*VPGRGP
Trigger: GGGGCCTCTTCCAGGCACCCACAGCCCTGACGGAGC...GTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGCTCCGTCAGGGCTGTaGGTGCCTGGAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: VTGGVGTLWYCGLCLELSAPSGL*VPGRGP
Trigger: GGGGCCTCTTCCAGGCACCCACAGCCCTGACGGAGC...GGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp AACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGCCTGGAGCTCTCCGTaGGGCCAGCTGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: NRWCGHTVVLWALPGALRAWSSP*GQLRLD
Trigger: GTCCAGCCTCAGCTGGCCCCACGGAGAGCTCCAGGC...ACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGACTGTGGGCTCTGCCTaGAGCTCTCCGTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LLSGPLIQEPVTGGVGTLTVGSA*SSPWGQ
Trigger: CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGT...CAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GCAGCACATGGGACAGAGGCTGTTGCGCACAGCAGAGGCTCGGAGCCAGACGACGGGCAGCCTGGTTCCTaGCCCTGCCATTCACCCCTC +
Preference number: 4 (lower is better)
Translates to: AAHGTEAVAHSRGSEPDDGQPGS*PCHSPL
Trigger: GAGGGGTGAATGGCAGGGCCAGGAACCAGGCTGCCC...GTCGTCTGGCTCCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCATGTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR CCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCATCTGCCCGGAGCTCGTaGAGAACCAGCCGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPSARSS*RTSRAE
Trigger: CTCAGCTCGGCTGGTTCTCCACGAGCTCCGGGCAGA...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCTCTGCCCGGAGCTCGTaGAGAACCAGCCGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGSARSS*RTSRAE
Trigger: CTCAGCTCGGCTGGTTCTCCACGAGCTCCGGGCAGA...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp CGGTGCGTATTTGACCACAAAGGCCCGGTGGCTGTCGAGCCGGCCCCCGCCACAGGTGTCTCCAGCCGCTaGAGAAGGCCCTTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: RCVFDHKGPVAVEPAPATGVSSR*RRPLRS
Trigger: AGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACACC...TGTGGCGGGGGCCGGCTCGACAGCCACCGGGCCTTTGTGGTCAAATACGCACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540324.5
3UTR CAA 72 bp AGGTCGGGCTCACGGCAGCACATGGGACAGAGGCTGTaGCGCACAGCAGAGGCTCGGAGCCAGACGACAAGG +
Preference number: 4 (lower is better)
Translates to: RSGSRQHMGQRL*RTAEARSQTTR
Trigger: CCTTGTCGTCTGGCTCCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCATGTGCTGCCGTGAGCCCGACCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR TCA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACGGCTTTCCTAGCTGCTaGCTCCTGCCCCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYGFPSC*LLPQPL
Trigger: CAGCGGCTGGGGCAGGAGTCAGCAGCTAGGAAAGCC...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAAGCTGCATCCTGCAGTaGGTCGTAGACCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPSCILQ*VVDLRP
Trigger: CGGCCTGAGGTCTACGACTCACTGCAGGATGCAGCT...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCAGCTGCATCCTGCAGTaGGTCGTAGACCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGSCILQ*VVDLRP
Trigger: CGGCCTGAGGTCTACGACTCACTGCAGGATGCAGCT...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGGGCAGAAGGGCGCTGTaGAAACAGGCACCCGGTAGA +
Preference number: 4 (lower is better)
Translates to: VWAHCGTVGSAWSSPWGQGRRAL*KQAPGR
Trigger: TCTACCGGGTGCCTGTTTTCACAGCGCCCTTCTGCC...CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGGCAGAAGGGCGCTGTaGAAACAGGCACCCGGTAGA +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPGRRAL*KQAPGR
Trigger: TCTACCGGGTGCCTGTTTTCACAGCGCCCTTCTGCC...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGCTGAGGGCAGAAGGGCGCTGTaGAAACAGGCACCCGGTAGA +
Preference number: 4 (lower is better)
Translates to: GTLWYCGLCLELSVGPAEGRRAL*KQAPGR
Trigger: TCTACCGGGTGCCTGTTTTCACAGCGCCCTTCTGCC...CTCAGCTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp TTCACTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACGGCCCGGTGCGTATTTaGCCACAAAGGCCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: FTPLWPPHPGASNRWCGHGPVRI*PQRPGG
Trigger: GCCACCGGGCCTTTGTGGTCAAATACGCACCGGGCC...GTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACCGGGCTCCTCTCGGGTaGAGCCATCACCGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYRAPLG*SHHRSP
Trigger: AGGGCTTCGGTGATGGCTTCACCCGAGAGGAGCCCG...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GGCTCGGAGCCAGACGACAAGGTTCCAACGCTCACCAGTGCCCAAGGGCCGGGCCGTACAAGTTATCGGTaGAGAAGCAGGCGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: GSEPDDKVPTLTSAQGPGRTSYR*RSRRSG
Trigger: GCCGCTGCGCCTGCTTCTGCACCGATAACTTGTACG...GCCCGGCCCTTGGGCACTGGTGAGCGTTGGAACCTTGTCGTCTGGCTCCGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR GCA 90 bp CCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTCTCCTGCCCCAGCCGCTaGCGCCGCTCCACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PCPGDKCLGSYSLLSGPLSCPSR*RRSTSC
Trigger: GCAGGAGGTGGAGCGGCGGCAGCGGCTGGGGCAGGA...GAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GTGAGCGCACATACATCCACCGTGGCGGGCTCCTCTCGGGTGAAGCCATCACCGGTAGACCTCAGGCCGTaGCGGGTGGTAGGAACTCGC +
Preference number: 4 (lower is better)
Translates to: VSAHTSTVAGSSRVKPSPVDLRP*RVVGTR
Trigger: GCGAGTTCCTACCACCCGGCACGGCCTGAGGTCTAC...CGGTGATGGCTTCACCCGAGAGGAGCCCGCCACGGTGGATGTATGTGCGCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR GCA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACAGGGCCATCAGCGGCTaGAGGAAGCGCTCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYRAISG*RKRSRS
Trigger: ACTGCGGGAGCGCTTCCTGCAGCCGCTGATGGCCCT...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCACGTCAGGGCTGTGGGTaGCTGGAAGAGGCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPRQGCG*LEEAPK
Trigger: TTTGGGGGCCTCTTCCAGGCACCCACAGCCCTGACG...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp CTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGCGTCAGGGCTGTGGGTaGCTGGAAGAGGCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: LLSGPLIQEPVTGGVGTLRQGCG*LEEAPK
Trigger: TTTGGGGGCCTCTTCCAGGCACCCACAGCCCTGACG...CAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GTGAGCGCACATACATCCACCGTGGCGGGCTCCTCTCGGGTGAAGCCATCACCGTCCAACGCTCACCAGTaGCCAAGGGCCGGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: VSAHTSTVAGSSRVKPSPSNAHQ*PRAGLH
Trigger: ATGGAGCCCGGCCCTTGGGCACTGGTGAGCGTTGGA...CGGTGATGGCTTCACCCGAGAGGAGCCCGCCACGGTGGATGTATGTGCGCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR GCA 90 bp GGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGCTGAGTGGGACAGAGGCTGTTaGGCACAGCAGAGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: GTLWYCGLCLELSVGPAEWDRGC*AQQRLG
Trigger: TCCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCA...CTCAGCTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCTGGGACAGAGGCTGTTaGGCACAGCAGAGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGWDRGC*AQQRLG
Trigger: TCCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCA...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACAACGGAGCCCTCACCTaGCTGCCACCCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYNGALT*LPPPHW
Trigger: CCAGTGTGGGGGTGGCAGGCAGGTGAGGGCTCCGTT...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp CCGGCCCCCGCCACAGTCAGGGTACAGCAGGGCCATCAGCGGCTGCAGGAAGCGTGCGCTTCTCCTCTGTaGCATGGAGATGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: PAPATVRVQQGHQRLQEACASPL*HGDEAF
Trigger: AAAGGCCTCATCTCCATGGCACAGAGGAGAAGCGCA...CGCTTCCTGCAGCCGCTGATGGCCCTGCTGTACCCTGACTGTGGCGGGGGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR CCA 90 bp CTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGGAAGCGCTCCCGCAGTaGTGTCATCAGCGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: LSGPLIQEPVTGGVGTLWEALPQ*CHQRLV
Trigger: GACGAGCCGCTGATGACACCACTGCGGGAGCGCTTC...CCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGGAAGCGCTCCCGCAGTaGTGTCATCAGCGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: LLSGPLIQEPVTGGVGTLEALPQ*CHQRLV
Trigger: GACGAGCCGCTGATGACACCACTGCGGGAGCGCTTC...CAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp ACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGCCCAGCTCCAGGTCCTaGCCCGGTGCGTATTTGACC +
Preference number: 4 (lower is better)
Translates to: TGGVGTLWYCGLCLELSVPSSRS*PGAYLT
Trigger: GGTCAAATACGCACCGGGCCAGGACCTGGAGCTGGG...CACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GCAGCACATGGGACAGAGGCTGTTGCGCACAGCAGAGGCTCGGAGCCAGACGACCCCAGCTCCAGGTCCTaGCCCGGTGCGTATTTGACC +
Preference number: 4 (lower is better)
Translates to: AAHGTEAVAHSRGSEPDDPSSRS*PGAYLT
Trigger: GGTCAAATACGCACCGGGCCAGGACCTGGAGCTGGG...GTCGTCTGGCTCCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCATGTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR CCA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCGGGCTCCATGCAGCTaGCCGCCACGGTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: PHPGASNRWCGHTVVLWARAPCS*PPRWRT
Trigger: TGTCCTCCACCGTGGCGGCCAGCTGCATGGAGCCCG...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGCTCACGGCAGCACATaGGACAGAGGCTGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPAHGST*DRGCCA
Trigger: TGCGCAACAGCCTCTGTCCCATGTGCTGCCGTGAGC...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GCAGAAGGGCGCTGTGAAAACAGGCACCCGGTAGATGCGCTTCTCCTCTGTGCCGCCTGGAGCTCTCCGTaGGGCCAGCTGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: AEGRCENRHPVDALLLCAAWSSP*GQLRLD
Trigger: GTCCAGCCTCAGCTGGCCCCACGGAGAGCTCCAGGC...GGCACAGAGGAGAAGCGCATCTACCGGGTGCCTGTTTTCACAGCGCCCTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR CCA 90 bp TTCACTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGGCTCTGCCTaGAGCTCTCCGTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: FTPLWPPHPGASNRWCGHTVGSA*SSPWGQ
Trigger: CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGT...GTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACACTGTGGGCTCTGCCTaGAGCTCTCCGTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYTVGSA*SSPWGQ
Trigger: CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGT...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CCGGCCCCCGCCACAGTCAGGGTACAGCAGGGCCATCAGCGGCTGCAGGAAGCGCACATCTGTGCTCTCTaGAGGCTTCCCTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: PAPATVRVQQGHQRLQEAHICAL*RLPLAT
Trigger: AGTAGCCAAGGGAAGCCTCCAGAGAGCACAGATGTG...CGCTTCCTGCAGCCGCTGATGGCCCTGCTGTACCCTGACTGTGGCGGGGGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR CCA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACGGGCAGCCTGGTTCCTaGCCCTGCCATTCACCCCTC +
Preference number: 4 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYGQPGS*PCHSPL
Trigger: GAGGGGTGAATGGCAGGGCCAGGAACCAGGCTGCCC...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCGCTCCTGGGCCGGGTTaGGACCGGCGGCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: APCPGDKCLGSYSLLSGPAPGPG*DRRPPR
Trigger: ACGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGC...GGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGGAGGGATGGTCTGTTaGCCTGAATGTGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPGGMVC*PECGRG
Trigger: CCCACGGCCACATTCAGGCCAACAGACCATCCCTCC...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538755.5
CDS-3UTR TCA 90 bp CTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGAGCTGCATCCTGCAGTaGGTCGTAGACCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LSGPLIQEPVTGGVGTLWSCILQ*VVDLRP
Trigger: CGGCCTGAGGTCTACGACTCACTGCAGGATGCAGCT...CCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGCTGGAGAAGGCCCTTaGGGTCTGCGTCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCAGEGP*GLRLGT
Trigger: TGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGC...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTGGCCCGGTGCGTATTTaGCCACAAAGGCCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: PHPGASNRWCGHTVVLWAGPVRI*PQRPGG
Trigger: GCCACCGGGCCTTTGTGGTCAAATACGCACCGGGCC...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCGGGCTCCTCTCGGGTaGAGCCATCACCGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: PHPGASNRWCGHTVVLWARAPLG*SHHRSP
Trigger: AGGGCTTCGGTGATGGCTTCACCCGAGAGGAGCCCG...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGGGTGATGCCTGCTGCTaGGGGTTCACATCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: VWAHCGTVGSAWSSPWGQGDACC*GFTSVL
Trigger: GAGCACAGATGTGAACCCTCAGCAGCAGGCATCACC...CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR TCA 90 bp ACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGAAGCTTCCCACCACTaGCTCCAGGGGAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TGGVGTLWYCGLCLELSVEASHH*LQGKEE
Trigger: CTCCTCCTTCCCCTGGAGTCAGTGGTGGGAAGCTTC...CACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS-3UTR GCA 90 bp GTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTAGACCTCAGGCCGTaGCGGGTGGTAGGAACTCGC +
Preference number: 4 (lower is better)
Translates to: VTGGVGTLWYCGLCLELSVDLRP*RVVGTR
Trigger: GCGAGTTCCTACCACCCGGCACGGCCTGAGGTCTAC...GGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGAAGGCCCTTGAGGTCTaGGTCTGGGGACACGCTGTA +
Preference number: 4 (lower is better)
Translates to: VWAHCGTVGSAWSSPWGQKALEV*VWGHAV
Trigger: TACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTT...CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAAAGGCCCTTGAGGTCTaGGTCTGGGGACACGCTGTA +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPKALEV*VWGHAV
Trigger: TACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTT...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGCAGGTCCTGGCCCGGTaGGTATTTGACCACAAAGGC +
Preference number: 4 (lower is better)
Translates to: VWAHCGTVGSAWSSPWGQQVLAR*VFDHKG
Trigger: GCCTTTGTGGTCAAATACGCACCGGGCCAGGACCTG...CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCAGGTCCTGGCCCGGTaGGTATTTGACCACAAAGGC +
Preference number: 4 (lower is better)
Translates to: GGVGTLWYCGLCLELSVGQVLAR*VFDHKG
Trigger: GCCTTTGTGGTCAAATACGCACCGGGCCAGGACCTG...CCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACCGTCAGGGCTGTGGGTaGCTGGAAGAGGCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYRQGCG*LEEAPK
Trigger: TTTGGGGGCCTCTTCCAGGCACCCACAGCCCTGACG...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp TTCACTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACCGTCAGGGCTGTGGGTaGCTGGAAGAGGCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: FTPLWPPHPGASNRWCGHRQGCG*LEEAPK
Trigger: TTTGGGGGCCTCTTCCAGGCACCCACAGCCCTGACG...GTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCAAGGGCCGGGCTCCATaGAGCTGGCCGCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: APCPGDKCLGSYSLLSGPKGRAP*SWPPRW
Trigger: CCACCGTGGCGGCCAGCTGCATGGAGCCCGGCCCTT...GGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTTCCAACGCTCACCAGTaGCCAAGGGCCGGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCSNAHQ*PRAGLH
Trigger: ATGGAGCCCGGCCCTTGGGCACTGGTGAGCGTTGGA...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp ACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGCTGAAGCCACTTCCTTaGCCAGCTGCTCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: TGGVGTLWYCGLCLELSVLKPLP*PAAPSP
Trigger: AGGGGAGGGAGCAGCTGGGCAAGGAAGTGGCTTCAG...CACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp CTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGGTCTGCGGAGAAAGATaGTCCTGGGCCGGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LSGPLIQEPVTGGVGTLWVCGER*SWAGLG
Trigger: TCCCAACCCGGCCCAGGAGCATCTTTCTCCGCAGAC...CCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR GCA 90 bp GGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCGCCAGGAAACGGTCTaGGGAGAAAGATGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GGVGTLWYCGLCLELSVGRQETV*GERCSW
Trigger: CCAGGAGCATCTTTCTCCGCAGACCGTTTCCTGGCG...CCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp GGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGACTGTCTCCAGCCGCTaGAGAAGGCCCTTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: GGVGTLWYCGLCLELSVGTVSSR*RRPLRS
Trigger: AGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGT...CCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAACTGTCTCCAGCCGCTaGAGAAGGCCCTTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPTVSSR*RRPLRS
Trigger: AGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGT...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCTCTTCCAGCAGGGCCTaGCAGAAGGGCGCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGSSSRA*QKGAVK
Trigger: TTTCACAGCGCCCTTCTGCCAGGCCCTGCTGGAAGA...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACCCCAGCTCCAGGTCCTaGCCCGGTGCGTATTTGACC +
Preference number: 4 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYPSSRS*PGAYLT
Trigger: GGTCAAATACGCACCGGGCCAGGACCTGGAGCTGGG...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGCTGAGAGGGCTGTGGGTGCCTaGAAGAGGCCCCCAAAATAC +
Preference number: 4 (lower is better)
Translates to: GTLWYCGLCLELSVGPAERAVGA*KRPPKY
Trigger: GTATTTTGGGGGCCTCTTCCAGGCACCCACAGCCCT...CTCAGCTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCAGGTGTGGGCACACTGTaGTACTGTGGGCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPGVGTL*YCGLCL
Trigger: CAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGGGAGCCAGTAACCGGTaGTGTGGGCACACTGTGGTA +
Preference number: 4 (lower is better)
Translates to: VWAHCGTVGSAWSSPWGQGASNR*CGHTVV
Trigger: TACCACAGTGTGCCCACACCACCGGTTACTGGCTCC...CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGAGAAGATGCTACTGGTaGCCCACCCGAGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: GGVGTLWYCGLCLELSVGRRCYW*PTRVHW
Trigger: CCAGTGGACTCGGGTGGGCCACCAGTAGCATCTTCT...CCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTTCTGCCCGGAGCTCGTaGAGAACCAGCCGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCSARSS*RTSRAE
Trigger: CTCAGCTCGGCTGGTTCTCCACGAGCTCCGGGCAGA...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCACTGCTCAAGCTGGGGTaGCACAGGGTTGTTACCAGG +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPLLKLG*HRVVTR
Trigger: CCTGGTAACAACCCTGTGCCACCCCAGCTTGAGCAG...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR CCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCTCGCATTACTTCCGGTaGCGTTCCCAATGGACGCGG +
Preference number: 4 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGSHYFR*RSQWTR
Trigger: CCGCGTCCATTGGGAACGCCACCGGAAGTAATGCGA...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS-3UTR TCA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACGGCAGAAGGGCGCTGTaGAAACAGGCACCCGGTAGA +
Preference number: 4 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYGRRAL*KQAPGR
Trigger: TCTACCGGGTGCCTGTTTTCACAGCGCCCTTCTGCC...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp CTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGCCAAGCAAGCTCAGGTaGGCGCACATACATCCACCG +
Preference number: 4 (lower is better)
Translates to: LLSGPLIQEPVTGGVGTLPSKLR*AHIHPP
Trigger: CGGTGGATGTATGTGCGCTCACCTGAGCTTGCTTGG...CAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp CTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGGGTGATGCCTGCTGCTaGGGGTTCACATCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LSGPLIQEPVTGGVGTLWGDACC*GFTSVL
Trigger: GAGCACAGATGTGAACCCTCAGCAGCAGGCATCACC...CCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGAGCCCCAAGGCCTTTaGCTTAAACGCCGACCCACC +
Preference number: 4 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCEPQGL*LKRRPT
Trigger: GGTGGGTCGGCGTTTAAGTCAAAGGCCTTGGGGCTC...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR GCA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTGTAGACCTCAGGCCGTaGCGGGTGGTAGGAACTCGC +
Preference number: 4 (lower is better)
Translates to: PHPGASNRWCGHTVVLWAVDLRP*RVVGTR
Trigger: GCGAGTTCCTACCACCCGGCACGGCCTGAGGTCTAC...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGTCCGATTGCTCGAAGTaGTCCAGCTCTTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VWAHCGTVGSAWSSPWGQSDCSK*SSSSSR
Trigger: CCTGCTGGAAGAGCTGGAGCACTTCGAGCAATCGGA...CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGCTGAGTCCGATTGCTCGAAGTaGTCCAGCTCTTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GTLWYCGLCLELSVGPAESDCSK*SSSSSR
Trigger: CCTGCTGGAAGAGCTGGAGCACTTCGAGCAATCGGA...CTCAGCTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp CACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCCCCCCTGGCCCACCACGTaGTCCACCTCCAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: HTVEPRSAVGCGDFISAPPWPTT*STSRGS
Trigger: GGAGCCCCTGGAGGTGGAGCACGTGGTGGGCCAGGG...GGGGGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTG
62% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTTCCAACGCTCACCAGTaGCCAAGGGCCGGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: PHPGASNRWCGHTVVLWASNAHQ*PRAGLH
Trigger: ATGGAGCCCGGCCCTTGGGCACTGGTGAGCGTTGGA...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCTGGGACAGAGGCTGTTaGGCACAGCAGAGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: VTGGVGTLWYCGLCLELSWDRGC*AQQRLG
Trigger: TCCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCA...GGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp TTCACTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACCTGAAGCCACTTCCTTaGCCAGCTGCTCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: FTPLWPPHPGASNRWCGHLKPLP*PAAPSP
Trigger: AGGGGAGGGAGCAGCTGGGCAAGGAAGTGGCTTCAG...GTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp ACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGCGCCAGGAAACGGTCTaGGGAGAAAGATGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TGGVGTLWYCGLCLELSVRQETV*GERCSW
Trigger: CCAGGAGCATCTTTCTCCGCAGACCGTTTCCTGGCG...CACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp ACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGACTGTCTCCAGCCGCTaGAGAAGGCCCTTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: TGGVGTLWYCGLCLELSVTVSSR*RRPLRS
Trigger: AGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGT...CACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCATCTTCCAGCAGGGCCTaGCAGAAGGGCGCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPSSSRA*QKGAVK
Trigger: TTTCACAGCGCCCTTCTGCCAGGCCCTGCTGGAAGA...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTCTTCCAGCAGGGCCTaGCAGAAGGGCGCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: LSGPLIQEPVTGGVGTLWSSSRA*QKGAVK
Trigger: TTTCACAGCGCCCTTCTGCCAGGCCCTGCTGGAAGA...CCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTGAAGCGCTCCCGCAGTaGTGTCATCAGCGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: PHPGASNRWCGHTVVLWAEALPQ*CHQRLV
Trigger: GACGAGCCGCTGATGACACCACTGCGGGAGCGCTTC...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCCCAGCTCCAGGTCCTaGCCCGGTGCGTATTTGACC +
Preference number: 4 (lower is better)
Translates to: PHPGASNRWCGHTVVLWAPSSRS*PGAYLT
Trigger: GGTCAAATACGCACCGGGCCAGGACCTGGAGCTGGG...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCAAGGGCTGTGGGTGCCTaGAAGAGGCCCCCAAAATAC +
Preference number: 4 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPRAVGA*KRPPKY
Trigger: GTATTTTGGGGGCCTCTTCCAGGCACCCACAGCCCT...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp AGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCAGCTGGCCGCCACGGTaGAGGACACCCTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: RHPALEISVWEVIHSSLASWPPR*RTPWPT
Trigger: GGTGGGCCAGGGTGTCCTCCACCGTGGCGGCCAGCT...GGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGCTCACGGCAGCACATaGGACAGAGGCTGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCAHGST*DRGCCA
Trigger: TGCGCAACAGCCTCTGTCCCATGTGCTGCCGTGAGC...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp TTCACTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACGCTCACGGCAGCACATaGGACAGAGGCTGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: FTPLWPPHPGASNRWCGHAHGST*DRGCCA
Trigger: TGCGCAACAGCCTCTGTCCCATGTGCTGCCGTGAGC...GTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp AACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGCTCACGGCAGCACATaGGACAGAGGCTGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: NRWCGHTVVLWALPGALRAHGST*DRGCCA
Trigger: TGCGCAACAGCCTCTGTCCCATGTGCTGCCGTGAGC...ACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGCTCACGGCAGCACATaGGACAGAGGCTGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: VTGGVGTLWYCGLCLELSAHGST*DRGCCA
Trigger: TGCGCAACAGCCTCTGTCCCATGTGCTGCCGTGAGC...GGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCGCCTGGAGCTCTCCGTaGGGCCAGCTGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: APCPGDKCLGSYSLLSGPAWSSP*GQLRLD
Trigger: GTCCAGCCTCAGCTGGCCCCACGGAGAGCTCCAGGC...GGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCACACACTGTGGTACTGTaGGCTCTGCCTGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPHTVVL*ALPGAL
Trigger: GAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTG...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp TTCACTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACGGTGTGGGCACACTGTaGTACTGTGGGCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: FTPLWPPHPGASNRWCGHGVGTL*YCGLCL
Trigger: CAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC...GTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCATTATTCACTCCTCTCTaGCCCCCTCATCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPLFTPL*PPHPGA
Trigger: GGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAATAA...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCTTATTCACTCCTCTCTaGCCCCCTCATCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGLFTPL*PPHPGA
Trigger: GGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAATAA...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGTTATTCACTCCTCTCTaGCCCCCTCATCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: VWAHCGTVGSAWSSPWGQLFTPL*PPHPGA
Trigger: GGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAATAA...CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCATCTGGAGGCTTCCCTTaGCTACTGGAAGGCACCCTG +
Preference number: 4 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPSGGFP*LLEGTL
Trigger: CAGGGTGCCTTCCAGTAGCCAAGGGAAGCCTCCAGA...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGTCTAGAAGATGCTACTaGTGGCCCACCCGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: VWAHCGTVGSAWSSPWGQSRRCY*WPTRVH
Trigger: GTGGACTCGGGTGGGCCACCAGTAGCATCTTCTAGA...CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCACCGACTAGTTCCCGCTaGTGCTTCAATCATCCAGCC +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPPTSSR*CFNHPA
Trigger: GGCTGGATGATTGAAGCACCAGCGGGAACTAGTCGG...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCATCAAGCTCAACCATCTaGGCCCACACAGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPSSSTI*AHTGTG
Trigger: TCCTGTCCCTGTGTGGGCCCAGATGGTTGAGCTTGA...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS-3UTR TCA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTAGCTGCATCCTGCAGTaGGTCGTAGACCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: PHPGASNRWCGHTVVLWASCILQ*VVDLRP
Trigger: CGGCCTGAGGTCTACGACTCACTGCAGGATGCAGCT...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp CCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTCACAGGGCGCCCCCTGTaGAGACCTTGCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PCPGDKCLGSYSLLSGPLTGRPL*RPCPRP
Trigger: TGGCCTTGGGCAAGGTCTTCACAGGGGGCGCCCTGT...GAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp CCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTCCGGGCTCCTCTCGGGTaGAGCCATCACCGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: PCPGDKCLGSYSLLSGPLRAPLG*SHHRSP
Trigger: AGGGCTTCGGTGATGGCTTCACCCGAGAGGAGCCCG...GAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCCCAAGCAAGCTCAGGTaGGCGCACATACATCCACCG +
Preference number: 4 (lower is better)
Translates to: VTGGVGTLWYCGLCLELSPSKLR*AHIHPP
Trigger: CGGTGGATGTATGTGCGCTCACCTGAGCTTGCTTGG...GGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCATCTTTGCCCATAGAATaGCCCAGAAGCTGGCACACC +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPSLPIE*PRSWHT
Trigger: GGTGTGCCAGCTTCTGGGTCATTCTATGGGCAAAGA...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCTCTTTGCCCATAGAATaGCCCAGAAGCTGGCACACC +
Preference number: 4 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGSLPIE*PRSWHT
Trigger: GGTGTGCCAGCTTCTGGGTCATTCTATGGGCAAAGA...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGGTGATGCCTGCTGCTaGGGGTTCACATCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: VTGGVGTLWYCGLCLELSGDACC*GFTSVL
Trigger: GAGCACAGATGTGAACCCTCAGCAGCAGGCATCACC...GGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGGAGAACCAGCCGAGCTaGGGACAGTTTAAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: GGVGTLWYCGLCLELSVGENQPS*GQFKEL
Trigger: GAGCTCTTTAAACTGTCCTCAGCTCGGCTGGTTCTC...CCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR TCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCACACTTTACAGACAGCTaGACTGGGTCGTGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPHFTDS*TGSCLH
Trigger: GTGAAGGCACGACCCAGTTCAGCTGTCTGTAAAGTG...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR TCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCACTTTACAGACAGCTaGACTGGGTCGTGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGHFTDS*TGSCLH
Trigger: GTGAAGGCACGACCCAGTTCAGCTGTCTGTAAAGTG...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR TCA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCACTCAGATTGCCCCAGTaGGTGTCTCCACCAAAACGC +
Preference number: 4 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPLRLPQ*VSPPKR
Trigger: GCGTTTTGGTGGAGACACTCACTGGGGCAATCTGAG...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS-3UTR GCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAAGCTCTGCTAACAGCTaGTGGAAGTCCTTGGCGCTA +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPSSANS*WKSLAL
Trigger: TAGCGCCAAGGACTTCCAGCAGCTGTTAGCAGAGCT...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228922.11
ENST00000454694.6
ENST00000538755.5
CDS-3UTR GCA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCTAGCTGCTGACTCCTaGCCCAGCCGCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGLAADS*PSRCRR
Trigger: GCGGCGGCAGCGGCTGGGGCAGGAGTCAGCAGCTAG...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp AACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTAAGGCCCTTGAGGTCTaGGTCTGGGGACACGCTGTA +
Preference number: 4 (lower is better)
Translates to: NRWCGHTVVLWALPGALRKALEV*VWGHAV
Trigger: TACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTT...ACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTCAGGTCCTGGCCCGGTaGGTATTTGACCACAAAGGC +
Preference number: 4 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCQVLAR*VFDHKG
Trigger: GCCTTTGTGGTCAAATACGCACCGGGCCAGGACCTG...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp TGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCCCTGGCCCACCACGTaGTCCACCTCCAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: WHTVEPRSAVGCGDFISAPWPTT*STSRGS
Trigger: GGAGCCCCTGGAGGTGGAGCACGTGGTGGGCCAGGG...GGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGAAGCCACTTCCTTaGCCAGCTGCTCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: PHPGASNRWCGHTVVLWALKPLP*PAAPSP
Trigger: AGGGGAGGGAGCAGCTGGGCAAGGAAGTGGCTTCAG...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGTACTGGAAGGCACCCTaGCCTGGAGATAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: VWAHCGTVGSAWSSPWGQYWKAP*PGDKCL
Trigger: CAGACACTTATCTCCAGGGCAGGGTGCCTTCCAGTA...CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp ACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGCTGCCATCTAGAAGATaGTACTGGTGGCCCACCCGA +
Preference number: 4 (lower is better)
Translates to: TGGVGTLWYCGLCLELSVLPSRR*YWWPTR
Trigger: TCGGGTGGGCCACCAGTAGCATCTTCTAGATGGCAG...CACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTCGCCAGGAAACGGTCTaGGGAGAAAGATGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCRQETV*GERCSW
Trigger: CCAGGAGCATCTTTCTCCGCAGACCGTTTCCTGGCG...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR GCA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACCGCCAGGAAACGGTCTaGGGAGAAAGATGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYRQETV*GERCSW
Trigger: CCAGGAGCATCTTTCTCCGCAGACCGTTTCCTGGCG...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR GCA 90 bp CTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGGGGGCTGTTCTTTCTTaGTGGGCCCCGATACTGTCT +
Preference number: 4 (lower is better)
Translates to: LLSGPLIQEPVTGGVGTLGAVLS*WAPILS
Trigger: AGACAGTATCGGGGCCCAGCAAGAAAGAACAGCCCC...CAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000538755.5
CDS-3UTR CCA 90 bp CTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGCTTGAGGTCTGCGTCTaGGGACACGCTGTACTCAGT +
Preference number: 4 (lower is better)
Translates to: LSGPLIQEPVTGGVGTLWLEVCV*GHAVLS
Trigger: ACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAG...CCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp TTCACTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACTCTTCCAGCAGGGCCTaGCAGAAGGGCGCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: FTPLWPPHPGASNRWCGHSSSRA*QKGAVK
Trigger: TTTCACAGCGCCCTTCTGCCAGGCCCTGCTGGAAGA...GTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp AGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCGGGCTCCATGCAGCTaGCCGCCACGGTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: RHPALEISVWEVIHSSLARAPCS*PPRWRT
Trigger: TGTCCTCCACCGTGGCGGCCAGCTGCATGGAGCCCG...GGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCCCGCCTGGAGCTCTCCGTaGGGCCAGCTGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: HTVEPRSAVGCGDFISAPAWSSP*GQLRLD
Trigger: GTCCAGCCTCAGCTGGCCCCACGGAGAGCTCCAGGC...GGGGGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCCACACTGTGGTACTGTaGGCTCTGCCTGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: VTGGVGTLWYCGLCLELSHTVVL*ALPGAL
Trigger: GAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTG...GGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp TTCACTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACGGAGCCAGTAACCGGTaGTGTGGGCACACTGTGGTA +
Preference number: 4 (lower is better)
Translates to: FTPLWPPHPGASNRWCGHGASNR*CGHTVV
Trigger: TACCACAGTGTGCCCACACCACCGGTTACTGGCTCC...GTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTTATTCACTCCTCTCTaGCCCCCTCATCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LSGPLIQEPVTGGVGTLWLFTPL*PPHPGA
Trigger: GGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAATAA...CCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp ACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGTTATTCACTCCTCTCTaGCCCCCTCATCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TGGVGTLWYCGLCLELSVLFTPL*PPHPGA
Trigger: GGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAATAA...CACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTCTGGAGGCTTCCCTTaGCTACTGGAAGGCACCCTG +
Preference number: 4 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYSGGFP*LLEGTL
Trigger: CAGGGTGCCTTCCAGTAGCCAAGGGAAGCCTCCAGA...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGCTGAGCCACACAGCTGGAAGTaGCAGAAGCAGAATGGGAAC +
Preference number: 4 (lower is better)
Translates to: GTLWYCGLCLELSVGPAEPHSWK*QKQNGN
Trigger: GTTCCCATTCTGCTTCTGCCACTTCCAGCTGTGTGG...CTCAGCTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGCCACACAGCTGGAAGTaGCAGAAGCAGAATGGGAAC +
Preference number: 4 (lower is better)
Translates to: VWAHCGTVGSAWSSPWGQPHSWK*QKQNGN
Trigger: GTTCCCATTCTGCTTCTGCCACTTCCAGCTGTGTGG...CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCGACAGGAGACAGTCATaGCCAAGTCCTGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGDRRQS*PSPVFQ
Trigger: CTGGAACACAGGACTTGGCCATGACTGTCTCCTGTC...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS-3UTR CCA 90 bp CCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTCGAGGGCGACGGGGCGTaGTCTCACCGCAGCCAACAA +
Preference number: 4 (lower is better)
Translates to: PCPGDKCLGSYSLLSGPLEGDGA*SHRSQQ
Trigger: TTGTTGGCTGCGGTGAGACCACGCCCCGTCGCCCTC...GAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS-3UTR CCA 90 bp GGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGCTGTTCTTTCTTGCTaGGCCCCGATACTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GVGTLWYCGLCLELSVGPAVLSC*APILSP
Trigger: TGGAGACAGTATCGGGGCCCAGCAAGAAAGAACAGC...TGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538755.5
CDS-3UTR TCA 90 bp CACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCCCGGCTTTCCTAGCTGCTaGCTCCTGCCCCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: HTVEPRSAVGCGDFISAPGFPSC*LLPQPL
Trigger: CAGCGGCTGGGGCAGGAGTCAGCAGCTAGGAAAGCC...GGGGGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp AGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCGGCTTTCCTAGCTGCTaGCTCCTGCCCCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: RHPALEISVWEVIHSSLAGFPSC*LLPQPL
Trigger: CAGCGGCTGGGGCAGGAGTCAGCAGCTAGGAAAGCC...GGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp CACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCCCCGGGCTCCTCTCGGGTaGAGCCATCACCGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: HTVEPRSAVGCGDFISAPRAPLG*SHHRSP
Trigger: AGGGCTTCGGTGATGGCTTCACCCGAGAGGAGCCCG...GGGGGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GCAGAAGGGCGCTGTGAAAACAGGCACCCGGTAGATGCGCTTCTCCTCTGTGCCCCAAGCAAGCTCAGGTaGGCGCACATACATCCACCG +
Preference number: 4 (lower is better)
Translates to: AEGRCENRHPVDALLLCAPSKLR*AHIHPP
Trigger: CGGTGGATGTATGTGCGCTCACCTGAGCTTGCTTGG...GGCACAGAGGAGAAGCGCATCTACCGGGTGCCTGTTTTCACAGCGCCCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR TCA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTGGTGATGCCTGCTGCTaGGGGTTCACATCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PHPGASNRWCGHTVVLWAGDACC*GFTSVL
Trigger: GAGCACAGATGTGAACCCTCAGCAGCAGGCATCACC...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTTCCGATTGCTCGAAGTaGTCCAGCTCTTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCSDCSK*SSSSSR
Trigger: CCTGCTGGAAGAGCTGGAGCACTTCGAGCAATCGGA...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTCCGATTGCTCGAAGTaGTCCAGCTCTTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYSDCSK*SSSSSR
Trigger: CCTGCTGGAAGAGCTGGAGCACTTCGAGCAATCGGA...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp CACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCCCAGGGCCATCAGCGGCTaGAGGAAGCGCTCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: HTVEPRSAVGCGDFISAPRAISG*RKRSRS
Trigger: ACTGCGGGAGCGCTTCCTGCAGCCGCTGATGGCCCT...GGGGGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCAGGTCCTGGCCCGGTaGGTATTTGACCACAAAGGC +
Preference number: 4 (lower is better)
Translates to: PHPGASNRWCGHTVVLWAQVLAR*VFDHKG
Trigger: GCCTTTGTGGTCAAATACGCACCGGGCCAGGACCTG...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp AGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCAACGGAGCCCTCACCTaGCTGCCACCCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: RHPALEISVWEVIHSSLANGALT*LPPPHW
Trigger: CCAGTGTGGGGGTGGCAGGCAGGTGAGGGCTCCGTT...GGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GTGAGCGCACATACATCCACCGTGGCGGGCTCCTCTCGGGTGAAGCCATCACCGTACTGGAAGGCACCCTaGCCTGGAGATAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: VSAHTSTVAGSSRVKPSPYWKAP*PGDKCL
Trigger: CAGACACTTATCTCCAGGGCAGGGTGCCTTCCAGTA...CGGTGATGGCTTCACCCGAGAGGAGCCCGCCACGGTGGATGTATGTGCGCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR GCA 90 bp CTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGGAGGGTTCACATCTGTaGTCTCTGGAGGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LLSGPLIQEPVTGGVGTLEGSHL*SLEASL
Trigger: AAGGGAAGCCTCCAGAGAGCACAGATGTGAACCCTC...CAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR GCA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCTCTACCCCGGGTCCCTaGCTGGCGCTTCCGGTCCCT +
Preference number: 4 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGSTPGP*LALPVP
Trigger: AGGGACCGGAAGCGCCAGGCAGGGACCCGGGGTAGA...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR GCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCTGGATTACCTCAGATTaGCCCAGTGAGTGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGWITSD*PSECLH
Trigger: GTGGAGACACTCACTGGGGCAATCTGAGGTAATCCA...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS-3UTR GCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGCCTCTGCTAACAGCTaGTGGAAGTCCTTGGCGCTA +
Preference number: 4 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCASANS*WKSLAL
Trigger: TAGCGCCAAGGACTTCCAGCAGCTGTTAGCAGAGGC...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS-3UTR GCA 90 bp GCAGAAGGGCGCTGTGAAAACAGGCACCCGGTAGATGCGCTTCTCCTCTGTGCCCAGGCACCCGGTAGATaGGCTTCTCCTCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: AEGRCENRHPVDALLLCAQAPGR*ASPLCH
Trigger: ATGGCACAGAGGAGAAGCGCATCTACCGGGTGCCTG...GGCACAGAGGAGAAGCGCATCTACCGGGTGCCTGTTTTCACAGCGCCCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR CCA 90 bp GTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGTCTGCTAACAGCTGCTaGAAGTCCTTGGCGCTAACA +
Preference number: 4 (lower is better)
Translates to: VWAHCGTVGSAWSSPWGQSANSC*KSLALT
Trigger: TGTTAGCGCCAAGGACTTCCAGCAGCTGTTAGCAGA...CTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGTCTGCTAACAGCTGCTaGAAGTCCTTGGCGCTAACA +
Preference number: 4 (lower is better)
Translates to: GGVGTLWYCGLCLELSVGSANSC*KSLALT
Trigger: TGTTAGCGCCAAGGACTTCCAGCAGCTGTTAGCAGA...CCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp TTCACTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACCTTGAGGTCTGCGTCTaGGGACACGCTGTACTCAGT +
Preference number: 4 (lower is better)
Translates to: FTPLWPPHPGASNRWCGHLEVCV*GHAVLS
Trigger: ACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAG...GTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACCTTGAGGTCTGCGTCTaGGGACACGCTGTACTCAGT +
Preference number: 4 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYLEVCV*GHAVLS
Trigger: ACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAG...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCCTTGAGGTCTGCGTCTaGGGACACGCTGTACTCAGT +
Preference number: 4 (lower is better)
Translates to: VTGGVGTLWYCGLCLELSLEVCV*GHAVLS
Trigger: ACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAG...GGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTAGGGCTGTGGGTGCCTaGAAGAGGCCCCCAAAATAC +
Preference number: 4 (lower is better)
Translates to: PHPGASNRWCGHTVVLWARAVGA*KRPPKY
Trigger: GTATTTTGGGGGCCTCTTCCAGGCACCCACAGCCCT...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGCACATCTGTGCTCTCTaGAGGCTTCCCTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: LSGPLIQEPVTGGVGTLWHICAL*RLPLAT
Trigger: AGTAGCCAAGGGAAGCCTCCAGAGAGCACAGATGTG...CCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTCTAGAAGATGCTACTaGTGGCCCACCCGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYSRRCY*WPTRVH
Trigger: GTGGACTCGGGTGGGCCACCAGTAGCATCTTCTAGA...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCTCTAGAAGATGCTACTaGTGGCCCACCCGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: VTGGVGTLWYCGLCLELSSRRCY*WPTRVH
Trigger: GTGGACTCGGGTGGGCCACCAGTAGCATCTTCTAGA...GGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCCCGGAACCCGGGCAGCCTaGTTCCTGGCCCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: HTVEPRSAVGCGDFISAPGTRAA*FLALPF
Trigger: GAATGGCAGGGCCAGGAACCAGGCTGCCCGGGTTCC...GGGGGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp TCAGCGGCTGCAGGAAGCGCTCCCGCAGTGGTGTCATCAGCGGCTCGTCCAGCCCTAAAGCCACACAGCTaGAAGTGGCAGAAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: SAAAGSAPAVVSSAARPALKPHS*KWQKQN
Trigger: ATTCTGCTTCTGCCACTTCCAGCTGTGTGGCTTTAG...GGCTGGACGAGCCGCTGATGACACCACTGCGGGAGCGCTTCCTGCAGCCGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR CCA 90 bp GTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCCCGACTAGTTCCCGCTaGTGCTTCAATCATCCAGCC +
Preference number: 4 (lower is better)
Translates to: VTGGVGTLWYCGLCLELSPTSSR*CFNHPA
Trigger: GGCTGGATGATTGAAGCACCAGCGGGAACTAGTCGG...GGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp TTCACTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACCCGACTAGTTCCCGCTaGTGCTTCAATCATCCAGCC +
Preference number: 4 (lower is better)
Translates to: FTPLWPPHPGASNRWCGHPTSSR*CFNHPA
Trigger: GGCTGGATGATTGAAGCACCAGCGGGAACTAGTCGG...GTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCACTGTGGAAGGAGGGATaGTCTGTTGGCCTGAATGTG +
Preference number: 4 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPLWKEG*SVGLNV
Trigger: CACATTCAGGCCAACAGACCATCCCTCCTTCCACAG...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538755.5
3UTR CAA 72 bp GTTCATGGTGTTGGGCCTCCCCTTAGGCATGTCCGATaGCTCGAAGTGCTCCAGCTCTTCCAGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: VHGVGPPLRHVR*LEVLQLFQQGL
Trigger: CAGGCCCTGCTGGAAGAGCTGGAGCACTTCGAGCAATCGGACATGCCTAAGGGGAGGCCCAACACCATGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR TCA 90 bp TGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCGGCTTTCCTAGCTGCTaGCTCCTGCCCCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: WHTVEPRSAVGCGDFISAGFPSC*LLPQPL
Trigger: CAGCGGCTGGGGCAGGAGTCAGCAGCTAGGAAAGCC...GGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp CACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCCCGCTGGAGAAGGCCCTTaGGGTCTGCGTCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: HTVEPRSAVGCGDFISAPAGEGP*GLRLGT
Trigger: TGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGC...GGGGGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCGGCAGAAGGGCGCTGTaGAAACAGGCACCCGGTAGA +
Preference number: 4 (lower is better)
Translates to: APCPGDKCLGSYSLLSGPGRRAL*KQAPGR
Trigger: TCTACCGGGTGCCTGTTTTCACAGCGCCCTTCTGCC...GGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp TGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCACAGGGCGCCCCCTGTaGAGACCTTGCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: WHTVEPRSAVGCGDFISATGRPL*RPCPRP
Trigger: TGGCCTTGGGCAAGGTCTTCACAGGGGGCGCCCTGT...GGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp TTCACTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACTCTTTGCCCATAGAATaGCCCAGAAGCTGGCACACC +
Preference number: 4 (lower is better)
Translates to: FTPLWPPHPGASNRWCGHSLPIE*PRSWHT
Trigger: GGTGTGCCAGCTTCTGGGTCATTCTATGGGCAAAGA...GTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTTCTTTGCCCATAGAATaGCCCAGAAGCTGGCACACC +
Preference number: 4 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCSLPIE*PRSWHT
Trigger: GGTGTGCCAGCTTCTGGGTCATTCTATGGGCAAAGA...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGCTGAGGAGGTAGGTGCTAAATaGGGAAACGAAGGCACCAAA +
Preference number: 4 (lower is better)
Translates to: GTLWYCGLCLELSVGPAEEVGAK*GNEGTK
Trigger: TTTGGTGCCTTCGTTTCCTCATTTAGCACCTACCTC...CTCAGCTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR TCA 90 bp TTCACTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACGAGAACCAGCCGAGCTaGGGACAGTTTAAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: FTPLWPPHPGASNRWCGHENQPS*GQFKEL
Trigger: GAGCTCTTTAAACTGTCCTCAGCTCGGCTGGTTCTC...GTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR TCA 90 bp CCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTCGAGCCCCAAGGCCTTTaGCTTAAACGCCGACCCACC +
Preference number: 4 (lower is better)
Translates to: PCPGDKCLGSYSLLSGPLEPQGL*LKRRPT
Trigger: GGTGGGTCGGCGTTTAAGTCAAAGGCCTTGGGGCTC...GAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR GCA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTTCCGATTGCTCGAAGTaGTCCAGCTCTTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PHPGASNRWCGHTVVLWASDCSK*SSSSSR
Trigger: CCTGCTGGAAGAGCTGGAGCACTTCGAGCAATCGGA...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp CTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTTAGGCATGTCCGATTaGTCGAAGTGCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LLSGPLIQEPVTGGVGTLLGMSD*SKCSSS
Trigger: AGAGCTGGAGCACTTCGAGCAATCGGACATGCCTAA...CAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp TGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCAGGGCCATCAGCGGCTaGAGGAAGCGCTCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: WHTVEPRSAVGCGDFISARAISG*RKRSRS
Trigger: ACTGCGGGAGCGCTTCCTGCAGCCGCTGATGGCCCT...GGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp CCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTCCTGAAGCCACTTCCTTaGCCAGCTGCTCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: PCPGDKCLGSYSLLSGPLLKPLP*PAAPSP
Trigger: AGGGGAGGGAGCAGCTGGGCAAGGAAGTGGCTTCAG...GAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCTACTGGAAGGCACCCTaGCCTGGAGATAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: VTGGVGTLWYCGLCLELSYWKAP*PGDKCL
Trigger: CAGACACTTATCTCCAGGGCAGGGTGCCTTCCAGTA...GGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACGAGGGTTCACATCTGTaGTCTCTGGAGGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYEGSHL*SLEASL
Trigger: AAGGGAAGCCTCCAGAGAGCACAGATGTGAACCCTC...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCTGCCATTCACCCCTCTaGCATCTAGAAGATGCTACT +
Preference number: 4 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGCHSPL*HLEDAT
Trigger: AGTAGCATCTTCTAGATGGCAGAGGGGTGAATGGCA...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR GCA 90 bp AACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTACTAGTTCCCGCTGGTaGTTCAATCATCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: NRWCGHTVVLWALPGALRTSSRW*FNHPAL
Trigger: CAGGGCTGGATGATTGAAGCACCAGCGGGAACTAGT...ACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR GCA 90 bp AACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTCACTCTGCTAACAGCTaGTGGAAGTCCTTGGCGCTA +
Preference number: 4 (lower is better)
Translates to: NRWCGHTVVLWALPGALRHSANS*WKSLAL
Trigger: TAGCGCCAAGGACTTCCAGCAGCTGTTAGCAGAGTG...ACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR CCA 90 bp CTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTCTGCTAACAGCTGCTaGAAGTCCTTGGCGCTAACA +
Preference number: 4 (lower is better)
Translates to: LLSGPLIQEPVTGGVGTLSANSC*KSLALT
Trigger: TGTTAGCGCCAAGGACTTCCAGCAGCTGTTAGCAGA...CAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp AGCTGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCTCCGTCAGGGCTGTaGGTGCCTGGAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SWHTVEPRSAVGCGDFISAPSGL*VPGRGP
Trigger: GGGGCCTCTTCCAGGCACCCACAGCCCTGACGGAGC...AGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp AGCTGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTCGGGCTCCATGCAGCTaGCCGCCACGGTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: SWHTVEPRSAVGCGDFISRAPCS*PPRWRT
Trigger: TGTCCTCCACCGTGGCGGCCAGCTGCATGGAGCCCG...AGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCGCTCACGGCAGCACATaGGACAGAGGCTGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: APCPGDKCLGSYSLLSGPAHGST*DRGCCA
Trigger: TGCGCAACAGCCTCTGTCCCATGTGCTGCCGTGAGC...GGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp AGCTGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCTGGAGCTCTCCGTaGGGCCAGCTGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SWHTVEPRSAVGCGDFISAWSSP*GQLRLD
Trigger: GTCCAGCCTCAGCTGGCCCCACGGAGAGCTCCAGGC...AGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp AACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTCCACACAGCTGGAAGTaGCAGAAGCAGAATGGGAAC +
Preference number: 4 (lower is better)
Translates to: NRWCGHTVVLWALPGALRPHSWK*QKQNGN
Trigger: GTTCCCATTCTGCTTCTGCCACTTCCAGCTGTGTGG...ACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCTACAGACAGCTGAACTaGGTCGTGCCTTCACAGGAC +
Preference number: 4 (lower is better)
Translates to: VTGGVGTLWYCGLCLELSYRQLN*VVPSQD
Trigger: GTCCTGTGAAGGCACGACCCAGTTCAGCTGTCTGTA...GGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTTCCGCCACAGTCTGTTaGATTACCTCAGATTGCCCC +
Preference number: 4 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCSATVC*ITSDCP
Trigger: GGGGCAATCTGAGGTAATCCAACAGACTGTGGCGGA...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397389.6
ENST00000538755.5
CDS-3UTR TCA 90 bp TTGTTCATGGTGTTGGGCCTCCCCTTAGGCATGTCCGATTGCTCGAAGTGCTCCAGCTGCATCCTGCAGTaGGTCGTAGACCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LFMVLGLPLGMSDCSKCSSCILQ*VVDLRP
Trigger: CGGCCTGAGGTCTACGACTCACTGCAGGATGCAGCT...GGAGCACTTCGAGCAATCGGACATGCCTAAGGGGAGGCCCAACACCATGAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR TCA 90 bp TGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCGCTGGAGAAGGCCCTTaGGGTCTGCGTCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: WHTVEPRSAVGCGDFISAAGEGP*GLRLGT
Trigger: TGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGC...GGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp AGCTGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTACAGGGCGCCCCCTGTaGAGACCTTGCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SWHTVEPRSAVGCGDFISTGRPL*RPCPRP
Trigger: TGGCCTTGGGCAAGGTCTTCACAGGGGGCGCCCTGT...AGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp CCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTCCCAAGCAAGCTCAGGTaGGCGCACATACATCCACCG +
Preference number: 4 (lower is better)
Translates to: PCPGDKCLGSYSLLSGPLPSKLR*AHIHPP
Trigger: CGGTGGATGTATGTGCGCTCACCTGAGCTTGCTTGG...GAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTTCTTTGCCCATAGAATaGCCCAGAAGCTGGCACACC +
Preference number: 4 (lower is better)
Translates to: PHPGASNRWCGHTVVLWASLPIE*PRSWHT
Trigger: GGTGTGCCAGCTTCTGGGTCATTCTATGGGCAAAGA...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp AGCTGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTCTCCGTGGGGCCAGCTaGGGCTGGACGTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SWHTVEPRSAVGCGDFISLRGAS*GWTSSE
Trigger: TTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAG...AGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp AGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCGAGCCCCAAGGCCTTTaGCTTAAACGCCGACCCACC +
Preference number: 4 (lower is better)
Translates to: RHPALEISVWEVIHSSLAEPQGL*LKRRPT
Trigger: GGTGGGTCGGCGTTTAAGTCAAAGGCCTTGGGGCTC...GGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR GCA 90 bp CCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTCCGTACAAGTTATCGGTaGAGAAGCAGGCGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: PCPGDKCLGSYSLLSGPLRTSYR*RSRRSG
Trigger: GCCGCTGCGCCTGCTTCTGCACCGATAACTTGTACG...GAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228922.11
ENST00000540324.5
CDS-3UTR GCA 90 bp GACCTTGCCCAAGGCCACATTGAGGGTGAGCTCGGCATTATCATAGTGGCAGCCAAGGCCCTTGAGGTCTaGGTCTGGGGACACGCTGTA +
Preference number: 4 (lower is better)
Translates to: DLAQGHIEGELGIIIVAAKALEV*VWGHAV
Trigger: TACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTT...GGCTGCCACTATGATAATGCCGAGCTCACCCTCAATGTGGCCTTGGGCAAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR GCA 90 bp CCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTCCAGGCACCCGGTAGATaGGCTTCTCCTCCGATACTG +
Preference number: 4 (lower is better)
Translates to: PCPGDKCLGSYSLLSGPLQAPGR*ASPPIL
Trigger: CAGTATCGGAGGAGAAGCGCATCTACCGGGTGCCTG...GAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
CDS-3UTR GCA 90 bp GCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCAGGCACCCGGTAGATaGGCTTCTCCTCCGATACTG +
Preference number: 4 (lower is better)
Translates to: APCPGDKCLGSYSLLSGPQAPGR*ASPPIL
Trigger: CAGTATCGGAGGAGAAGCGCATCTACCGGGTGCCTG...GGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
CDS-3UTR GCA 90 bp AACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTTTAGGCATGTCCGATTaGTCGAAGTGCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: NRWCGHTVVLWALPGALRLGMSD*SKCSSS
Trigger: AGAGCTGGAGCACTTCGAGCAATCGGACATGCCTAA...ACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp AGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCTGGGACAGAGGCTGTTaGGCACAGCAGAGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: RHPALEISVWEVIHSSLAWDRGC*AQQRLG
Trigger: TCCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCA...GGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp TTGTTCATGGTGTTGGGCCTCCCCTTAGGCATGTCCGATTGCTCGAAGTGCTCCCTGAAGCCACTTCCTTaGCCAGCTGCTCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LFMVLGLPLGMSDCSKCSLKPLP*PAAPSP
Trigger: AGGGGAGGGAGCAGCTGGGCAAGGAAGTGGCTTCAG...GGAGCACTTCGAGCAATCGGACATGCCTAAGGGGAGGCCCAACACCATGAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR GCA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTTACTGGAAGGCACCCTaGCCTGGAGATAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PHPGASNRWCGHTVVLWAYWKAP*PGDKCL
Trigger: CAGACACTTATCTCCAGGGCAGGGTGCCTTCCAGTA...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp AGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCGTCTGCGGAGAAAGATaGTCCTGGGCCGGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: RHPALEISVWEVIHSSLAVCGER*SWAGLG
Trigger: TCCCAACCCGGCCCAGGAGCATCTTTCTCCGCAGAC...GGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTTCTGCTAACAGCTGCTaGAAGTCCTTGGCGCTAACA +
Preference number: 4 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCSANSC*KSLALT
Trigger: TGTTAGCGCCAAGGACTTCCAGCAGCTGTTAGCAGA...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTCACTGTCTCCAGCCGCTaGAGAAGGCCCTTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: PCPGDKCLGSYSLLSGPLTVSSR*RRPLRS
Trigger: AGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGT...GAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp TGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCGAAGCGCTCCCGCAGTaGTGTCATCAGCGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: WHTVEPRSAVGCGDFISAEALPQ*CHQRLV
Trigger: GACGAGCCGCTGATGACACCACTGCGGGAGCGCTTC...GGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCAGCTCCAGGTCCTaGCCCGGTGCGTATTTGACC +
Preference number: 4 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGPSSRS*PGAYLT
Trigger: GGTCAAATACGCACCGGGCCAGGACCTGGAGCTGGG...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTCAGGGCTGTGGGTGCCTaGAAGAGGCCCCCAAAATAC +
Preference number: 4 (lower is better)
Translates to: PCPGDKCLGSYSLLSGPLRAVGA*KRPPKY
Trigger: GTATTTTGGGGGCCTCTTCCAGGCACCCACAGCCCT...GAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTTACAGACAGCTGAACTaGGTCGTGCCTTCACAGGAC +
Preference number: 4 (lower is better)
Translates to: PHPGASNRWCGHTVVLWAYRQLN*VVPSQD
Trigger: GTCCTGTGAAGGCACGACCCAGTTCAGCTGTCTGTA...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
3UTR CAA 72 bp GATGCGCTTCTCCTCTGTGCCATGGAGATGAGGCCTTaGCTTTTCAGGGTGTCTCCAGCCGCTGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: DALLLCAMEMRP*LFRVSPAAGEG
Trigger: GCCTTCTCCAGCGGCTGGAGACACCCTGAAAAGCAAAGGCCTCATCTCCATGGCACAGAGGAGAAGCGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR GCA 90 bp AGCTGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGTAGACCTCAGGCCGTaGCGGGTGGTAGGAACTCGC +
Preference number: 4 (lower is better)
Translates to: SWHTVEPRSAVGCGDFISVDLRP*RVVGTR
Trigger: GCGAGTTCCTACCACCCGGCACGGCCTGAGGTCTAC...AGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp CACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCCCCAGGCACCCGGTAGATaGGCTTCTCCTCCGATACTG +
Preference number: 4 (lower is better)
Translates to: HTVEPRSAVGCGDFISAPQAPGR*ASPPIL
Trigger: CAGTATCGGAGGAGAAGCGCATCTACCGGGTGCCTG...GGGGGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
CDS-3UTR GCA 90 bp AGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCAGGTCCTGGCCCGGTaGGTATTTGACCACAAAGGC +
Preference number: 4 (lower is better)
Translates to: RHPALEISVWEVIHSSLAQVLAR*VFDHKG
Trigger: GCCTTTGTGGTCAAATACGCACCGGGCCAGGACCTG...GGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp AGCTGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTTCCAACGCTCACCAGTaGCCAAGGGCCGGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: SWHTVEPRSAVGCGDFISSNAHQ*PRAGLH
Trigger: ATGGAGCCCGGCCCTTGGGCACTGGTGAGCGTTGGA...AGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCTGGGACAGAGGCTGTTaGGCACAGCAGAGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGWDRGC*AQQRLG
Trigger: TCCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCA...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp AACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTTGCCATTCACCCCTCTaGCATCTAGAAGATGCTACT +
Preference number: 4 (lower is better)
Translates to: NRWCGHTVVLWALPGALRCHSPL*HLEDAT
Trigger: AGTAGCATCTTCTAGATGGCAGAGGGGTGAATGGCA...ACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR GCA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCGTCTGCGGAGAAAGATaGTCCTGGGCCGGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGVCGER*SWAGLG
Trigger: TCCCAACCCGGCCCAGGAGCATCTTTCTCCGCAGAC...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp CACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCCCCACACTGTGGTACTGTaGGCTCTGCCTGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: HTVEPRSAVGCGDFISAPHTVVL*ALPGAL
Trigger: GAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTG...GGGGGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCCCGGAGCCAGTAACCGGTaGTGTGGGCACACTGTGGTA +
Preference number: 4 (lower is better)
Translates to: HTVEPRSAVGCGDFISAPGASNR*CGHTVV
Trigger: TACCACAGTGTGCCCACACCACCGGTTACTGGCTCC...GGGGGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCTGGAGATAAGTGTCTaGGAAGTTATTCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGLEISV*EVIHSS
Trigger: AGAGGAGTGAATAACTTCCCAGACACTTATCTCCAG...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCCCTCTGGAGGCTTCCCTTaGCTACTGGAAGGCACCCTG +
Preference number: 4 (lower is better)
Translates to: HTVEPRSAVGCGDFISAPSGGFP*LLEGTL
Trigger: CAGGGTGCCTTCCAGTAGCCAAGGGAAGCCTCCAGA...GGGGGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp AGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCTCTGGAGGCTTCCCTTaGCTACTGGAAGGCACCCTG +
Preference number: 4 (lower is better)
Translates to: RHPALEISVWEVIHSSLASGGFP*LLEGTL
Trigger: CAGGGTGCCTTCCAGTAGCCAAGGGAAGCCTCCAGA...GGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCCCAGAAGATGCTACTGGTaGCCCACCCGAGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: HTVEPRSAVGCGDFISAPRRCYW*PTRVHW
Trigger: CCAGTGGACTCGGGTGGGCCACCAGTAGCATCTTCT...GGGGGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp AACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTCTAAAGCCACACAGCTaGAAGTGGCAGAAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: NRWCGHTVVLWALPGALRLKPHS*KWQKQN
Trigger: ATTCTGCTTCTGCCACTTCCAGCTGTGTGGCTTTAG...ACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GACCTTGCCCAAGGCCACATTGAGGGTGAGCTCGGCATTATCATAGTGGCAGCCACCTCCTGCTCAAGCTaGGGTGGCACAGGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: DLAQGHIEGELGIIIVAATSCSS*GGTGLL
Trigger: TAACAACCCTGTGCCACCCCAGCTTGAGCAGGAGGT...GGCTGCCACTATGATAATGCCGAGCTCACCCTCAATGTGGCCTTGGGCAAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR TCA 90 bp AGCTGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTAGCTGCATCCTGCAGTaGGTCGTAGACCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: SWHTVEPRSAVGCGDFISSCILQ*VVDLRP
Trigger: CGGCCTGAGGTCTACGACTCACTGCAGGATGCAGCT...AGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp ACGAAGGCACCAAAAGGTGAAGGCTCACCTAAAGCCACACAGCTGGAAGTGGCACCAAGCAAGCTCAGGTaGGCGCACATACATCCACCG +
Preference number: 4 (lower is better)
Translates to: TKAPKGEGSPKATQLEVAPSKLR*AHIHPP
Trigger: CGGTGGATGTATGTGCGCTCACCTGAGCTTGCTTGG...TGCCACTTCCAGCTGTGTGGCTTTAGGTGAGCCTTCACCTTTTGGTGCCTTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR TCA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCAAGCAAGCTCAGGTaGGCGCACATACATCCACCG +
Preference number: 4 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGPSKLR*AHIHPP
Trigger: CGGTGGATGTATGTGCGCTCACCTGAGCTTGCTTGG...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp GACCTTGCCCAAGGCCACATTGAGGGTGAGCTCGGCATTATCATAGTGGCAGCCTCTTTGCCCATAGAATaGCCCAGAAGCTGGCACACC +
Preference number: 4 (lower is better)
Translates to: DLAQGHIEGELGIIIVAASLPIE*PRSWHT
Trigger: GGTGTGCCAGCTTCTGGGTCATTCTATGGGCAAAGA...GGCTGCCACTATGATAATGCCGAGCTCACCCTCAATGTGGCCTTGGGCAAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR GCA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCAAGGCCCTTGAGGTCTaGGTCTGGGGACACGCTGTA +
Preference number: 4 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGKALEV*VWGHAV
Trigger: TACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTT...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp ACGAAGGCACCAAAAGGTGAAGGCTCACCTAAAGCCACACAGCTGGAAGTGGCACAGGTCCTGGCCCGGTaGGTATTTGACCACAAAGGC +
Preference number: 4 (lower is better)
Translates to: TKAPKGEGSPKATQLEVAQVLAR*VFDHKG
Trigger: GCCTTTGTGGTCAAATACGCACCGGGCCAGGACCTG...TGCCACTTCCAGCTGTGTGGCTTTAGGTGAGCCTTCACCTTTTGGTGCCTTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR GCA 90 bp AGCTGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTTGGGACAGAGGCTGTTaGGCACAGCAGAGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: SWHTVEPRSAVGCGDFISWDRGC*AQQRLG
Trigger: TCCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCA...AGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp AGCTGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTCTGAAGCCACTTCCTTaGCCAGCTGCTCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SWHTVEPRSAVGCGDFISLKPLP*PAAPSP
Trigger: AGGGGAGGGAGCAGCTGGGCAAGGAAGTGGCTTCAG...AGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp AGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCTGCCATCTAGAAGATaGTACTGGTGGCCCACCCGA +
Preference number: 4 (lower is better)
Translates to: RHPALEISVWEVIHSSLALPSRR*YWWPTR
Trigger: TCGGGTGGGCCACCAGTAGCATCTTCTAGATGGCAG...GGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GCACCCGGTAGATGCGCTTCTCCTCTGTGCCATGGAGATGAGGCCTTTGCTTTTCTGCCATCTAGAAGATaGTACTGGTGGCCCACCCGA +
Preference number: 4 (lower is better)
Translates to: APGRCASPLCHGDEAFAFLPSRR*YWWPTR
Trigger: TCGGGTGGGCCACCAGTAGCATCTTCTAGATGGCAG...AAAAGCAAAGGCCTCATCTCCATGGCACAGAGGAGAAGCGCATCTACCGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR GCA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTTGCCATTCACCCCTCTaGCATCTAGAAGATGCTACT +
Preference number: 4 (lower is better)
Translates to: PHPGASNRWCGHTVVLWACHSPL*HLEDAT
Trigger: AGTAGCATCTTCTAGATGGCAGAGGGGTGAATGGCA...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR GCA 90 bp AGCTGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGTCTGCGGAGAAAGATaGTCCTGGGCCGGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: SWHTVEPRSAVGCGDFISVCGER*SWAGLG
Trigger: TCCCAACCCGGCCCAGGAGCATCTTTCTCCGCAGAC...AGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR GCA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCAGGCACCCGGTAGATaGGCTTCTCCTCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGQAPGR*ASPLWK
Trigger: CTTCCACAGAGGAGAAGCGCATCTACCGGGTGCCTG...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538755.5
CDS-3UTR CCA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCACTGTCTCCAGCCGCTaGAGAAGGCCCTTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGTVSSR*RRPLRS
Trigger: AGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGT...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCTCTTCCAGCAGGGCCTaGCAGAAGGGCGCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGSSSRA*QKGAVK
Trigger: TTTCACAGCGCCCTTCTGCCAGGCCCTGCTGGAAGA...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp ACGAAGGCACCAAAAGGTGAAGGCTCACCTAAAGCCACACAGCTGGAAGTGGCAAGGGCTGTGGGTGCCTaGAAGAGGCCCCCAAAATAC +
Preference number: 4 (lower is better)
Translates to: TKAPKGEGSPKATQLEVARAVGA*KRPPKY
Trigger: GTATTTTGGGGGCCTCTTCCAGGCACCCACAGCCCT...TGCCACTTCCAGCTGTGTGGCTTTAGGTGAGCCTTCACCTTTTGGTGCCTTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp ACGAAGGCACCAAAAGGTGAAGGCTCACCTAAAGCCACACAGCTGGAAGTGGCACACACTGTGGTACTGTaGGCTCTGCCTGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: TKAPKGEGSPKATQLEVAHTVVL*ALPGAL
Trigger: GAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTG...TGCCACTTCCAGCTGTGTGGCTTTAGGTGAGCCTTCACCTTTTGGTGCCTTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp TGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCACACTGTGGTACTGTaGGCTCTGCCTGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: WHTVEPRSAVGCGDFISAHTVVL*ALPGAL
Trigger: GAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTG...GGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp ACGAAGGCACCAAAAGGTGAAGGCTCACCTAAAGCCACACAGCTGGAAGTGGCAGGAGCCAGTAACCGGTaGTGTGGGCACACTGTGGTA +
Preference number: 4 (lower is better)
Translates to: TKAPKGEGSPKATQLEVAGASNR*CGHTVV
Trigger: TACCACAGTGTGCCCACACCACCGGTTACTGGCTCC...TGCCACTTCCAGCTGTGTGGCTTTAGGTGAGCCTTCACCTTTTGGTGCCTTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp TGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCGGAGCCAGTAACCGGTaGTGTGGGCACACTGTGGTA +
Preference number: 4 (lower is better)
Translates to: WHTVEPRSAVGCGDFISAGASNR*CGHTVV
Trigger: TACCACAGTGTGCCCACACCACCGGTTACTGGCTCC...GGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp ACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGCTGGAGATAAGTGTCTaGGAAGTTATTCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: TGGVGTLWYCGLCLELSVLEISV*EVIHSS
Trigger: AGAGGAGTGAATAACTTCCCAGACACTTATCTCCAG...CACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTCCACATCTGTGCTCTCTaGAGGCTTCCCTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: PCPGDKCLGSYSLLSGPLHICAL*RLPLAT
Trigger: AGTAGCCAAGGGAAGCCTCCAGAGAGCACAGATGTG...GAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCCACACAGCTGGAAGTaGCAGAAGCAGAATGGGAAC +
Preference number: 4 (lower is better)
Translates to: APCPGDKCLGSYSLLSGPPHSWK*QKQNGN
Trigger: GTTCCCATTCTGCTTCTGCCACTTCCAGCTGTGTGG...GGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCTACAGACAGCTGAACTaGGTCGTGCCTTCACAGGAC +
Preference number: 4 (lower is better)
Translates to: APCPGDKCLGSYSLLSGPYRQLN*VVPSQD
Trigger: GTCCTGTGAAGGCACGACCCAGTTCAGCTGTCTGTA...GGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp CCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTCTGCGCTTCTCCTCTGTaGAAGGAGGGATGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: PCPGDKCLGSYSLLSGPLCASPL*KEGWSV
Trigger: AACAGACCATCCCTCCTTCCACAGAGGAGAAGCGCA...GAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538755.5
CDS-3UTR TCA 90 bp AGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCACTTTACAGACAGCTaGACTGGGTCGTGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: RHPALEISVWEVIHSSLAHFTDS*TGSCLH
Trigger: GTGAAGGCACGACCCAGTTCAGCTGTCTGTAAAGTG...GGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR TCA 90 bp TGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCTGTTCCAGAGGTTGCTaGGGACTCTCCTGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: WHTVEPRSAVGCGDFISACSRGC*GLSWEA
Trigger: AGCTTCCCAGGAGAGTCCTCAGCAACCTCTGGAACA...GGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS-3UTR GCA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCTCCGATTGCTCGAAGTaGTCCAGCTCTTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGSDCSK*SSSSSR
Trigger: CCTGCTGGAAGAGCTGGAGCACTTCGAGCAATCGGA...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp TGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCTGCCATCTAGAAGATaGTACTGGTGGCCCACCCGA +
Preference number: 4 (lower is better)
Translates to: WHTVEPRSAVGCGDFISALPSRR*YWWPTR
Trigger: TCGGGTGGGCCACCAGTAGCATCTTCTAGATGGCAG...GGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR GCA 90 bp CACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCCCACTAGTTCCCGCTGGTaGTTCAATCATCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: HTVEPRSAVGCGDFISAPTSSRW*FNHPAL
Trigger: CAGGGCTGGATGATTGAAGCACCAGCGGGAACTAGT...GGGGGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CCA 90 bp TGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCTTGAGGTCTGCGTCTaGGGACACGCTGTACTCAGT +
Preference number: 4 (lower is better)
Translates to: WHTVEPRSAVGCGDFISALEVCV*GHAVLS
Trigger: ACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAG...GGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp AACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTCTGGAGATAAGTGTCTaGGAAGTTATTCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: NRWCGHTVVLWALPGALRLEISV*EVIHSS
Trigger: AGAGGAGTGAATAACTTCCCAGACACTTATCTCCAG...ACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp GTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCCTGGAGATAAGTGTCTaGGAAGTTATTCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: VTGGVGTLWYCGLCLELSLEISV*EVIHSS
Trigger: AGAGGAGTGAATAACTTCCCAGACACTTATCTCCAG...GGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp AGCTGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTAGAAGATGCTACTGGTaGCCCACCCGAGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: SWHTVEPRSAVGCGDFISRRCYW*PTRVHW
Trigger: CCAGTGGACTCGGGTGGGCCACCAGTAGCATCTTCT...AGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp ACGAAGGCACCAAAAGGTGAAGGCTCACCTAAAGCCACACAGCTGGAAGTGGCATCTAGAAGATGCTACTaGTGGCCCACCCGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: TKAPKGEGSPKATQLEVASRRCY*WPTRVH
Trigger: GTGGACTCGGGTGGGCCACCAGTAGCATCTTCTAGA...TGCCACTTCCAGCTGTGTGGCTTTAGGTGAGCCTTCACCTTTTGGTGCCTTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR TCA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCGAGAACCAGCCGAGCTaGGGACAGTTTAAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGENQPS*GQFKEL
Trigger: GAGCTCTTTAAACTGTCCTCAGCTCGGCTGGTTCTC...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR GCA 90 bp CACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCCCTTAGGCATGTCCGATTaGTCGAAGTGCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: HTVEPRSAVGCGDFISAPLGMSD*SKCSSS
Trigger: AGAGCTGGAGCACTTCGAGCAATCGGACATGCCTAA...GGGGGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCGAGGGTTCACATCTGTaGTCTCTGGAGGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGEGSHL*SLEASL
Trigger: AAGGGAAGCCTCCAGAGAGCACAGATGTGAACCCTC...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGGAGATAAGTGTCTaGGAAGTTATTCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: PHPGASNRWCGHTVVLWALEISV*EVIHSS
Trigger: AGAGGAGTGAATAACTTCCCAGACACTTATCTCCAG...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp TGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCACATCTGTGCTCTCTaGAGGCTTCCCTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: WHTVEPRSAVGCGDFISAHICAL*RLPLAT
Trigger: AGTAGCCAAGGGAAGCCTCCAGAGAGCACAGATGTG...GGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR GCA 90 bp TGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCTTAGGCATGTCCGATTaGTCGAAGTGCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: WHTVEPRSAVGCGDFISALGMSD*SKCSSS
Trigger: AGAGCTGGAGCACTTCGAGCAATCGGACATGCCTAA...GGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp AGCTGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTTACTGGAAGGCACCCTaGCCTGGAGATAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SWHTVEPRSAVGCGDFISYWKAP*PGDKCL
Trigger: CAGACACTTATCTCCAGGGCAGGGTGCCTTCCAGTA...AGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR GCA 90 bp GCACCCGGTAGATGCGCTTCTCCTCTGTGCCATGGAGATGAGGCCTTTGCTTTTTGCCATTCACCCCTCTaGCATCTAGAAGATGCTACT +
Preference number: 4 (lower is better)
Translates to: APGRCASPLCHGDEAFAFCHSPL*HLEDAT
Trigger: AGTAGCATCTTCTAGATGGCAGAGGGGTGAATGGCA...AAAAGCAAAGGCCTCATCTCCATGGCACAGAGGAGAAGCGCATCTACCGGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR CCA 90 bp TGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCTCTGCTAACAGCTGCTaGAAGTCCTTGGCGCTAACA +
Preference number: 4 (lower is better)
Translates to: WHTVEPRSAVGCGDFISASANSC*KSLALT
Trigger: TGTTAGCGCCAAGGACTTCCAGCAGCTGTTAGCAGA...GGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CCA 90 bp CATGGAGATGAGGCCTTTGCTTTTCAGGGTGTCTCCAGCCGCTGGAGAAGGCCCCTGGAGATAAGTGTCTaGGAAGTTATTCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: HGDEAFAFQGVSSRWRRPLEISV*EVIHSS
Trigger: AGAGGAGTGAATAACTTCCCAGACACTTATCTCCAG...GGGCCTTCTCCAGCGGCTGGAGACACCCTGAAAAGCAAAGGCCTCATCTCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR CCA 90 bp AGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCTAAAGCCACACAGCTaGAAGTGGCAGAAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: RHPALEISVWEVIHSSLALKPHS*KWQKQN
Trigger: ATTCTGCTTCTGCCACTTCCAGCTGTGTGGCTTTAG...GGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CCA 90 bp AGCTGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTTACAGACAGCTGAACTaGGTCGTGCCTTCACAGGAC +
Preference number: 4 (lower is better)
Translates to: SWHTVEPRSAVGCGDFISYRQLN*VVPSQD
Trigger: GTCCTGTGAAGGCACGACCCAGTTCAGCTGTCTGTA...AGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR TCA 90 bp ACGAAGGCACCAAAAGGTGAAGGCTCACCTAAAGCCACACAGCTGGAAGTGGCAGAGGTAGGTGCTAAATaGGGAAACGAAGGCACCAAA +
Preference number: 4 (lower is better)
Translates to: TKAPKGEGSPKATQLEVAEVGAK*GNEGTK
Trigger: TTTGGTGCCTTCGTTTCCTCATTTAGCACCTACCTC...TGCCACTTCCAGCTGTGTGGCTTTAGGTGAGCCTTCACCTTTTGGTGCCTTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR TCA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCGAGGTAGGTGCTAAATaGGGAAACGAAGGCACCAAA +
Preference number: 4 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGEVGAK*GNEGTK
Trigger: TTTGGTGCCTTCGTTTCCTCATTTAGCACCTACCTC...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR GCA 90 bp AGCTGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTTTAGGCATGTCCGATTaGTCGAAGTGCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SWHTVEPRSAVGCGDFISLGMSD*SKCSSS
Trigger: AGAGCTGGAGCACTTCGAGCAATCGGACATGCCTAA...AGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR TCA 90 bp AGCTGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGAGGTAGGTGCTAAATaGGGAAACGAAGGCACCAAA +
Preference number: 4 (lower is better)
Translates to: SWHTVEPRSAVGCGDFISEVGAK*GNEGTK
Trigger: TTTGGTGCCTTCGTTTCCTCATTTAGCACCTACCTC...AGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS GCA 90 bp CCATGCAGCTGGCCGCCACGGTGGAGGACACCCTGGCCCACCACGTaGTCCACCTCCAGGGGCTCCGTCAGGGCTGTGGGTGCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: PCSWPPRWRTPWPTT*STSRGSVRAVGACR
Trigger: TCTGCAGGCACCCACAGCCCTGACGGAGCCCCTGGAGGTGGAGCACGTGGTGGGCCAGGGTGTCCTCCACCGTGGCGGCCAGCTGCATGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545396.5
CDS-3UTR CAA 90 bp GGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGTGCTCCTGGGCCGGGTaGGGACCGGCGGCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: GGVGTLWYCGLCLELSVGCSWAG*GPAASS
Trigger: CGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGCA...CCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CAA 90 bp CTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGCTCCTGGGCCGGGTaGGGACCGGCGGCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: LLSGPLIQEPVTGGVGTLCSWAG*GPAASS
Trigger: CGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGCA...CAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS GCA 90 bp CTCGGCTGCGCAGGATCTCGCCAGGAAACGGTCTGCGGAGAAAGATaGTCCTGGGCCGGGTTGGGACCGGCGGCCTCCTCGTTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: LGCAGSRQETVCGER*SWAGLGPAASSFRL
Trigger: GAGGCGGAACGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGCATCTTTCTCCGCAGACCGTTTCCTGGCGAGATCCTGCGCAGCCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000397389.6
ENST00000406539.6
ENST00000454694.6
ENST00000538628.5
ENST00000538755.5
ENST00000542117.5
ENST00000544358.5
ENST00000545056.5
ENST00000545317.5
ENST00000545612.5
CDS CCA 90 bp CCTGGCCCACCACGTGCTCCACCTCCAGGGGCTCCGTCAGGGCTGTaGGTGCCTGCAGATGGCACGACTCAGGCCTGGGCACTCACAGCT +
Preference number: 5 (lower is better)
Translates to: PGPPRAPPPGAPSGL*VPADGTTQAWALTA
Trigger: AGCTGTGAGTGCCCAGGCCTGAGTCGTGCCATCTGCAGGCACCCACAGCCCTGACGGAGCCCCTGGAGGTGGAGCACGTGGTGGGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545396.5
CDS GCA 90 bp GGAAGCGCACGTGCAGCCCATAGCGCGCCACGTACAAGTTATCGGTaGAGAAGCAGGCGCAGCGGCAGAAGTGCCGCGGAGCCCCCACCG +
Preference number: 5 (lower is better)
Translates to: GSARAAHSAPRTSYR*RSRRSGRSAAEPPP
Trigger: CGGTGGGGGCTCCGCGGCACTTCTGCCGCTGCGCCTGCTTCTGCACCGATAACTTGTACGTGGCGCGCTATGGGCTGCACGTGCGCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000228922.11
ENST00000420319.6
ENST00000537966.5
ENST00000540324.5
ENST00000541360.5
ENST00000545033.5
ENST00000545396.5
CDS GCA 90 bp CTCGCGATGAGGGCTTTCCTAGCTGCTGACTCCTGCCCCAGCCGCTaGCGCCGCTCCACCTCCTGCTCAAGCTGGGGTGGCACAGGGTTG +
Preference number: 5 (lower is better)
Translates to: LAMRAFLAADSCPSR*RRSTSCSSWGGTGL
Trigger: CAACCCTGTGCCACCCCAGCTTGAGCAGGAGGTGGAGCGGCGGCAGCGGCTGGGGCAGGAGTCAGCAGCTAGGAAAGCCCTCATCGCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000406539.6
ENST00000537966.5
ENST00000540324.5
ENST00000542037.1
ENST00000545056.5
ENST00000545317.5
CDS GCA 90 bp CCACCTCCTGCTCAAGCTCGCCAGGAAACGGTCTGCGGAGAAAGATaGTCCTGGGCCGGGTTGGGACCGGCGGCCTCCTCGTTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: PPPAQARQETVCGER*SWAGLGPAASSFRL
Trigger: GAGGCGGAACGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGCATCTTTCTCCGCAGACCGTTTCCTGGCGAGCTTGAGCAGGAGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535970.5
ENST00000536150.5
CDS CCA 90 bp CTTCCGGTGGCGTTCCCAATGGACGCGGGAGGGCGGGGTCAGGTGTaGGAGGGCGACGGGGCGTGGTCTCACCGCAGCCAACAAATGACA +
Preference number: 5 (lower is better)
Translates to: LPVAFPMDAGGRGQV*EGDGAWSHRSQQMT
Trigger: TGTCATTTGTTGGCTGCGGTGAGACCACGCCCCGTCGCCCTCCCACACCTGACCCCGCCCTCCCGCGTCCATTGGGAACGCCACCGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS GCA 90 bp CTCGCGATGAGGGCTTTCCTAGCTGCTGACTCCTGCCCCAGCCGCTaGCGCCGCTCCACCTCCTGCTCAAGCTCAACCATCTGGGCCCAC +
Preference number: 5 (lower is better)
Translates to: LAMRAFLAADSCPSR*RRSTSCSSSTIWAH
Trigger: GTGGGCCCAGATGGTTGAGCTTGAGCAGGAGGTGGAGCGGCGGCAGCGGCTGGGGCAGGAGTCAGCAGCTAGGAAAGCCCTCATCGCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS GCA 90 bp CTCGCGATGAGGGCTTTCCTAGCTGCTGACTCCTGCCCCAGCCGCTaGCGCCGCTCCACCTCCTGCTCAAGCTCGCCAGGAAACGGTCTG +
Preference number: 5 (lower is better)
Translates to: LAMRAFLAADSCPSR*RRSTSCSSSPGNGL
Trigger: CAGACCGTTTCCTGGCGAGCTTGAGCAGGAGGTGGAGCGGCGGCAGCGGCTGGGGCAGGAGTCAGCAGCTAGGAAAGCCCTCATCGCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535970.5
ENST00000536150.5
CDS GCA 90 bp GTGGGTGCCTGCAGATGGCACGACTCAGGCCTGGGCACTCACAGCTaGCCCAGGCCCTGCCGCATGGGTCACACACTCACCTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: VGACRWHDSGLGTHS*PRPCRMGHTLTWKR
Trigger: CCTCTTCCAGGTGAGTGTGTGACCCATGCGGCAGGGCCTGGGGCAGCTGTGAGTGCCCAGGCCTGAGTCGTGCCATCTGCAGGCACCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545396.5
CDS CCA 90 bp TGCGCAGGATCTCGCCAGGAAACGGTCTGCGGAGAAAGATGCTCCTaGGCCGGGTTGGGACCGGCGGCCTCCTCGTTCCGCCTCCCAGTT +
Preference number: 5 (lower is better)
Translates to: CAGSRQETVCGERCS*AGLGPAASSFRLPV
Trigger: AACTGGGAGGCGGAACGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGCATCTTTCTCCGCAGACCGTTTCCTGGCGAGATCCTGCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000397389.6
ENST00000406539.6
ENST00000454694.6
ENST00000538628.5
ENST00000538755.5
ENST00000542117.5
ENST00000544358.5
ENST00000545056.5
ENST00000545317.5
ENST00000545612.5
CDS CCA 90 bp CCTGCTCAAGCTCGCCAGGAAACGGTCTGCGGAGAAAGATGCTCCTaGGCCGGGTTGGGACCGGCGGCCTCCTCGTTCCGCCTCCCAGTT +
Preference number: 5 (lower is better)
Translates to: PAQARQETVCGERCS*AGLGPAASSFRLPV
Trigger: AACTGGGAGGCGGAACGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGCATCTTTCTCCGCAGACCGTTTCCTGGCGAGCTTGAGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535970.5
ENST00000536150.5
CDS CCA 90 bp CGCTTCTCCTCTCGCCAGGAAACGGTCTGCGGAGAAAGATGCTCCTaGGCCGGGTTGGGACCGGCGGCCTCCTCGTTCCGCCTCCCAGTT +
Preference number: 5 (lower is better)
Translates to: RFSSRQETVCGERCS*AGLGPAASSFRLPV
Trigger: AACTGGGAGGCGGAACGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGCATCTTTCTCCGCAGACCGTTTCCTGGCGAGAGGAGAAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544852.5
CDS GCA 90 bp GCCACGTACAAGTTATCGGTGCAGAAGCAGGCGCAGCGGCAGAAGTaGCGCGGAGCCCCCACCGTCGCCATAGTGAAGCACCCACAGCCC +
Preference number: 5 (lower is better)
Translates to: ATYKLSVQKQAQRQK*RGAPTVAIVKHPQP
Trigger: GGGCTGTGGGTGCTTCACTATGGCGACGGTGGGGGCTCCGCGGCACTTCTGCCGCTGCGCCTGCTTCTGCACCGATAACTTGTACGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228922.11
CDS GCA 90 bp CTCGCGATGAGGGCTTTCCTAGCTGCTGACTCCTGCCCCAGCCGCTaGCGCCGCTCCACCTCCTGCTCAAGCTCTGCTAACAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LAMRAFLAADSCPSR*RRSTSCSSSANSCW
Trigger: CCAGCAGCTGTTAGCAGAGCTTGAGCAGGAGGTGGAGCGGCGGCAGCGGCTGGGGCAGGAGTCAGCAGCTAGGAAAGCCCTCATCGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000228922.11
ENST00000454694.6
ENST00000538628.5
ENST00000538755.5
ENST00000541360.5
ENST00000542117.5
ENST00000542940.5
ENST00000544358.5
ENST00000545396.5
ENST00000545612.5
CDS GCA 90 bp GGGCCCCGATACTGTCTCCAGCCGCTGGAGAAGGCCCTTGAGGTCTaGGTCTGGGGACACGCTGTACTCAGTCACGGCCAGGAACTCGGG +
Preference number: 5 (lower is better)
Translates to: GPRYCLQPLEKALEV*VWGHAVLSHGQELG
Trigger: CCCGAGTTCCTGGCCGTGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCGGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538755.5
ENST00000541360.5
ENST00000542037.1
ENST00000544358.5
ENST00000545056.5
CDS GCA 90 bp CTCGCGATGAGGGCTTTCCTAGCTGCTGACTCCTGCCCCAGCCGCTaGCGCCGCTCCACCTCCTGCTCAAGCTCAGATTGCCCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: LAMRAFLAADSCPSR*RRSTSCSSSDCPSE
Trigger: CTCACTGGGGCAATCTGAGCTTGAGCAGGAGGTGGAGCGGCGGCAGCGGCTGGGGCAGGAGTCAGCAGCTAGGAAAGCCCTCATCGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536615.5
CDS CCA 90 bp CGCTGCCGCCGCTCCACCTCCTGCTCAAGCTCTGCTAACAGCTGCTaGAAGTCCTTGGCGCTAACACAGCCTCGGCTGCGCAGGATCGGG +
Preference number: 5 (lower is better)
Translates to: RCRRSTSCSSSANSC*KSLALTQPRLRRIG
Trigger: CCCGATCCTGCGCAGCCGAGGCTGTGTTAGCGCCAAGGACTTCCAGCAGCTGTTAGCAGAGCTTGAGCAGGAGGTGGAGCGGCGGCAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228922.11
ENST00000541360.5
ENST00000545396.5
CDS CCA 90 bp CTCGCCAGGAAACGGTCTGCGGAGAAAGATGCTCCTGGGCCGGGTTaGGACCGGCGGCCTCCTCGTTCCGCCTCCCAGTTTTCCCACTAC +
Preference number: 5 (lower is better)
Translates to: LARKRSAEKDAPGPG*DRRPPRSASQFSHY
Trigger: GTAGTGGGAAAACTGGGAGGCGGAACGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGCATCTTTCTCCGCAGACCGTTTCCTGGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000397389.6
ENST00000406539.6
ENST00000454694.6
ENST00000535970.5
ENST00000536150.5
ENST00000538628.5
ENST00000538755.5
ENST00000542117.5
ENST00000544358.5
ENST00000544852.5
ENST00000545056.5
ENST00000545317.5
ENST00000545612.5
CDS CCA 90 bp TCAGGGTGTCTCCAGCCGCTGGAGAAGGCCCTTGAGGTCTGCGTCTaGGGACACGCTGTACTCAGTCACGGCCAGGAACTCGGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: SGCLQPLEKALEVCV*GHAVLSHGQELGGQ
Trigger: CTGGCCCCCGAGTTCCTGGCCGTGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACACCCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535970.5
ENST00000540324.5
ENST00000545317.5
ENST00000545396.5
CDS-3UTR CAA 90 bp CTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGCGCTGGAGAAGGCCCTaGAGGTCTGCGTCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: LLSGPLIQEPVTGGVGTLRWRRP*RSASGD
Trigger: GTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCG...CAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS GCA 90 bp CCAGCATCCCACACCCAGGTTTCCCAGGCTGCCATTCCCTGGTCCTaGCAGGTCTCAGGGCCAGGACCTCACCCGATACTGTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: PASHTQVSQAAIPWS*QVSGPGPHPILSPA
Trigger: GGCTGGAGACAGTATCGGGTGAGGTCCTGGCCCTGAGACCTGGCAGGACCAGGGAATGGCAGCCTGGGAAACCTGGGTGTGGGATGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420319.6
ENST00000538628.5
CDS CCA 90 bp CGATACTGTCTCCAGCCGCTGGAGAAGGCCCTTGAGGTCTGCGTCTaGGGACACGCTGTACTCAGTCACGGCCAGGAACTCGGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: RYCLQPLEKALEVCV*GHAVLSHGQELGGQ
Trigger: CTGGCCCCCGAGTTCCTGGCCGTGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000406539.6
ENST00000420319.6
ENST00000454694.6
ENST00000536150.5
ENST00000536615.5
ENST00000537966.5
ENST00000538628.5
ENST00000538755.5
ENST00000541360.5
ENST00000542037.1
ENST00000542117.5
ENST00000542940.5
ENST00000544358.5
ENST00000545033.5
ENST00000545056.5
ENST00000545612.5
CDS CCA 90 bp CGCTGCCGCCGCTCCACCTCCTGCTCAAGCTCTGCTAACAGCTGCTaGAAGTCCTTGGCGCTAACACAGCCTCGGCTGCGCAGGATCTCG +
Preference number: 5 (lower is better)
Translates to: RCRRSTSCSSSANSC*KSLALTQPRLRRIS
Trigger: CGAGATCCTGCGCAGCCGAGGCTGTGTTAGCGCCAAGGACTTCCAGCAGCTGTTAGCAGAGCTTGAGCAGGAGGTGGAGCGGCGGCAGCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000454694.6
ENST00000538628.5
ENST00000538755.5
ENST00000542117.5
ENST00000544358.5
ENST00000545612.5
CDS CCA 90 bp AAACAGGCACCCGGTAGATGCGCTTCTCCTCTGTGGAAGGAGGGATaGTCTGTTGGCCTGAATGTGGCCGTGGGCCGGCCAGGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: KQAPGRCASPLWKEG*SVGLNVAVGRPGLG
Trigger: GCCCAGGCCTGGCCGGCCCACGGCCACATTCAGGCCAACAGACCATCCCTCCTTCCACAGAGGAGAAGCGCATCTACCGGGTGCCTGTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000535970.5
ENST00000536439.1
ENST00000538628.5
ENST00000538755.5
ENST00000544358.5
ENST00000545056.5
ENST00000545317.5
ENST00000545396.5
ENST00000545612.5
ENST00000545976.1
CDS CCA 90 bp CGCTGCCGCCGCTCCACCTCCTGCTCAAGCTCTGCTAACAGCTGCTaGAAGTCCTTGGCGCTAACACAGCCTCGGCTGCGCAGGATCCCT +
Preference number: 5 (lower is better)
Translates to: RCRRSTSCSSSANSC*KSLALTQPRLRRIP
Trigger: AGGGATCCTGCGCAGCCGAGGCTGTGTTAGCGCCAAGGACTTCCAGCAGCTGTTAGCAGAGCTTGAGCAGGAGGTGGAGCGGCGGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542940.5
CDS-3UTR CAA 90 bp GGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCAGCTGAGAGCTGCTGGAAGTCCTaGGCGCTAACACAGCCTCGG +
Preference number: 5 (lower is better)
Translates to: GTLWYCGLCLELSVGPAESCWKS*ALTQPR
Trigger: CCGAGGCTGTGTTAGCGCCAAGGACTTCCAGCAGCT...CTCAGCTGGCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CAA 90 bp AGGCTCGGAGCCAGACGACAAGGTTCCAACGCTCACCAGTGCCCAAGGGCCGGGAGCTGCTGGAAGTCCTaGGCGCTAACACAGCCTCGG +
Preference number: 5 (lower is better)
Translates to: RLGARRQGSNAHQCPRAGSCWKS*ALTQPR
Trigger: CCGAGGCTGTGTTAGCGCCAAGGACTTCCAGCAGCT...CCCGGCCCTTGGGCACTGGTGAGCGTTGGAACCTTGTCGTCTGGCTCCGAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR CAA 90 bp ACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGTGGCCCGGTGCGTATTaGACCACAAAGGCCCGGTGG +
Preference number: 5 (lower is better)
Translates to: TGGVGTLWYCGLCLELSVWPGAY*TTKARW
Trigger: CCACCGGGCCTTTGTGGTCAAATACGCACCGGGCCA...CACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CAA 90 bp ACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGATGGGACAGAGGCTGTaGCGCACAGCAGAGGCTCGG +
Preference number: 5 (lower is better)
Translates to: TGGVGTLWYCGLCLELSVMGQRL*RTAEAR
Trigger: CCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCAT...CACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CAA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCAATGGGACAGAGGCTGTaGCGCACAGCAGAGGCTCGG +
Preference number: 5 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPMGQRL*RTAEAR
Trigger: CCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCAT...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CAA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCTCTGGAGGCTTCCCTaGGCTACTGGAAGGCACCCT +
Preference number: 5 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGLWRLP*ATGRHP
Trigger: AGGGTGCCTTCCAGTAGCCAAGGGAAGCCTCCAGAG...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS TCA 90 bp CCAGGACCTCACCCGATACTGTCTCCAGCCGCTGGAGAAGGCCCTTaGGGTCTGCGTCTGGGGACACGCTGTACTCAGTCACGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: PGPHPILSPAAGEGP*GLRLGTRCTQSRPG
Trigger: TCCTGGCCGTGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCGGGTGAGGTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420319.6
ENST00000538628.5
CDS TCA 90 bp TCTTGCTGGGCCCCGATACTGTCTCCAGCCGCTGGAGAAGGCCCTTaGGGTCTGCGTCTGGGGACACGCTGTACTCAGTCACGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: SCWAPILSPAAGEGP*GLRLGTRCTQSRPG
Trigger: TCCTGGCCGTGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCGGGGCCCAGCAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538755.5
ENST00000541360.5
ENST00000542037.1
ENST00000544358.5
ENST00000545056.5
CDS GCA 90 bp CTCCTCCGATACTGTCTCCAGCCGCTGGAGAAGGCCCTTGAGGTCTaGGTCTGGGGACACGCTGTACTCAGTCACGGCCAGGAACTCGGG +
Preference number: 5 (lower is better)
Translates to: LLRYCLQPLEKALEV*VWGHAVLSHGQELG
Trigger: CCCGAGTTCCTGGCCGTGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCGGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000406539.6
ENST00000454694.6
ENST00000536150.5
ENST00000536615.5
ENST00000542117.5
ENST00000542940.5
ENST00000545033.5
CDS GCA 90 bp CTCACCCGATACTGTCTCCAGCCGCTGGAGAAGGCCCTTGAGGTCTaGGTCTGGGGACACGCTGTACTCAGTCACGGCCAGGAACTCGGG +
Preference number: 5 (lower is better)
Translates to: LTRYCLQPLEKALEV*VWGHAVLSHGQELG
Trigger: CCCGAGTTCCTGGCCGTGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCGGGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420319.6
ENST00000538628.5
CDS CCA 90 bp GGAGCTGTGCAGGGGCAGGGGACTGGTACCTCTGCTAACAGCTGCTaGAAGTCCTTGGCGCTAACACAGCCTCGGCTGCGCAGGATCTCG +
Preference number: 5 (lower is better)
Translates to: GAVQGQGTGTSANSC*KSLALTQPRLRRIS
Trigger: CGAGATCCTGCGCAGCCGAGGCTGTGTTAGCGCCAAGGACTTCCAGCAGCTGTTAGCAGAGGTACCAGTCCCCTGCCCCTGCACAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406539.6
CDS CCA 90 bp CCAGGTCTCAGGGCCAGGACCTCACCCGATACTGTCTCCAGCCGCTaGAGAAGGCCCTTGAGGTCTGCGTCTGGGGACACGCTGTACTCA +
Preference number: 5 (lower is better)
Translates to: PGLRARTSPDTVSSR*RRPLRSASGDTLYS
Trigger: TGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCGGGTGAGGTCCTGGCCCTGAGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420319.6
ENST00000538628.5
CDS-3UTR CAA 90 bp TCAGCGGCTGCAGGAAGCGCTCCCGCAGTGGTGTCATCAGCGGCTCGTCCAGCCCTTAGGCATGTCCGATaGCTCGAAGTGCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: SAAAGSAPAVVSSAARPALRHVR*LEVLQL
Trigger: GAGCTGGAGCACTTCGAGCAATCGGACATGCCTAAG...GGCTGGACGAGCCGCTGATGACACCACTGCGGGAGCGCTTCCTGCAGCCGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR CAA 90 bp TTCACTCCTCTCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACTGGCCCGGTGCGTATTaGACCACAAAGGCCCGGTGG +
Preference number: 5 (lower is better)
Translates to: FTPLWPPHPGASNRWCGHWPGAY*TTKARW
Trigger: CCACCGGGCCTTTGTGGTCAAATACGCACCGGGCCA...GTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CAA 90 bp CAAGCAAGCTCAGGTGAGCGCACATACATCCACCGTGGCGGGCTCCTCTCGGGTTGGCCCGGTGCGTATTaGACCACAAAGGCCCGGTGG +
Preference number: 5 (lower is better)
Translates to: QASSGERTYIHRGGLLSGWPGAY*TTKARW
Trigger: CCACCGGGCCTTTGTGGTCAAATACGCACCGGGCCA...ACCCGAGAGGAGCCCGCCACGGTGGATGTATGTGCGCTCACCTGAGCTTGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR CAA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCACCCCCTGTGAAGACCTaGCCCAAGGCCACATTGAGG +
Preference number: 5 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPPPVKT*PKATLR
Trigger: CCTCAATGTGGCCTTGGGCAAGGTCTTCACAGGGGG...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CAA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTATGGGACAGAGGCTGTaGCGCACAGCAGAGGCTCGG +
Preference number: 5 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCMGQRL*RTAEAR
Trigger: CCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCAT...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CAA 90 bp ACGAAGGCACCAAAAGGTGAAGGCTCACCTAAAGCCACACAGCTGGAAGTGGCATGCTCCTGGGCCGGGTaGGGACCGGCGGCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: TKAPKGEGSPKATQLEVACSWAG*GPAASS
Trigger: CGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGCA...TGCCACTTCCAGCTGTGTGGCTTTAGGTGAGCCTTCACCTTTTGGTGCCTTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397389.6
ENST00000536150.5
CDS-3UTR CAA 90 bp GGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGAGGGGCTGTTCTTTCTaGCTGGGCCCCGATACTGTC +
Preference number: 5 (lower is better)
Translates to: GGVGTLWYCGLCLELSVGRGCSF*LGPDTV
Trigger: GACAGTATCGGGGCCCAGCAAGAAAGAACAGCCCCT...CCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538755.5
CDS TCA 90 bp TGCGCTTCTCCTCCGATACTGTCTCCAGCCGCTGGAGAAGGCCCTTaGGGTCTGCGTCTGGGGACACGCTGTACTCAGTCACGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: CASPPILSPAAGEGP*GLRLGTRCTQSRPG
Trigger: TCCTGGCCGTGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCGGAGGAGAAGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000406539.6
ENST00000454694.6
ENST00000536150.5
ENST00000536615.5
ENST00000542117.5
ENST00000542940.5
ENST00000545033.5
CDS GCA 90 bp TGCTTTTCAGGGTGTCTCCAGCCGCTGGAGAAGGCCCTTGAGGTCTaGGTCTGGGGACACGCTGTACTCAGTCACGGCCAGGAACTCGGG +
Preference number: 5 (lower is better)
Translates to: CFSGCLQPLEKALEV*VWGHAVLSHGQELG
Trigger: CCCGAGTTCCTGGCCGTGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACACCCTGAAAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535970.5
ENST00000540324.5
ENST00000545317.5
ENST00000545396.5
CDS GCA 90 bp ATCACCCGATACTGTCTCCAGCCGCTGGAGAAGGCCCTTGAGGTCTaGGTCTGGGGACACGCTGTACTCAGTCACGGCCAGGAACTCGGG +
Preference number: 5 (lower is better)
Translates to: ITRYCLQPLEKALEV*VWGHAVLSHGQELG
Trigger: CCCGAGTTCCTGGCCGTGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCGGGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545612.5
ENST00000545976.1
CDS-3UTR CAA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACAGCTGCTGGAAGTCCTaGGCGCTAACACAGCCTCGG +
Preference number: 5 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYSCWKS*ALTQPR
Trigger: CCGAGGCTGTGTTAGCGCCAAGGACTTCCAGCAGCT...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CAA 90 bp GTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGGGGCCTTAGGCATGTCCGATaGCTCGAAGTGCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: VVWAHCGTVGSAWSSPWGLRHVR*LEVLQL
Trigger: GAGCTGGAGCACTTCGAGCAATCGGACATGCCTAAG...GCCCCACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CAA 90 bp GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTCCCCCTGTGAAGACCTaGCCCAAGGCCACATTGAGG +
Preference number: 5 (lower is better)
Translates to: GPLIQEPVTGGVGTLWYCPPVKT*PKATLR
Trigger: CCTCAATGTGGCCTTGGGCAAGGTCTTCACAGGGGG...ACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CAA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACCCCCCTGTGAAGACCTaGCCCAAGGCCACATTGAGG +
Preference number: 5 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYPPVKT*PKATLR
Trigger: CCTCAATGTGGCCTTGGGCAAGGTCTTCACAGGGGG...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CAA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTATGGGACAGAGGCTGTaGCGCACAGCAGAGGCTCGG +
Preference number: 5 (lower is better)
Translates to: PHPGASNRWCGHTVVLWAMGQRL*RTAEAR
Trigger: CCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCAT...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CAA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACCTCTGGAGGCTTCCCTaGGCTACTGGAAGGCACCCT +
Preference number: 5 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYLWRLP*ATGRHP
Trigger: AGGGTGCCTTCCAGTAGCCAAGGGAAGCCTCCAGAG...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CAA 90 bp AGCTGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTTGCTCCTGGGCCGGGTaGGGACCGGCGGCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: SWHTVEPRSAVGCGDFISCSWAG*GPAASS
Trigger: CGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGCA...AGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
CDS TCA 90 bp AGGCCTTTGCTTTTCAGGGTGTCTCCAGCCGCTGGAGAAGGCCCTTaGGGTCTGCGTCTGGGGACACGCTGTACTCAGTCACGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: RPLLFRVSPAAGEGP*GLRLGTRCTQSRPG
Trigger: TCCTGGCCGTGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACACCCTGAAAAGCAAAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535970.5
ENST00000540324.5
ENST00000545317.5
ENST00000545396.5
CDS-3UTR CAA 90 bp CTCTCCGTGGGGCCAGCTGAGGCTGGACGTCCTCTGAAGCCACTTCCTTGCCCACTTAGGCATGTCCGATaGCTCGAAGTGCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LSVGPAEAGRPLKPLPCPLRHVR*LEVLQL
Trigger: GAGCTGGAGCACTTCGAGCAATCGGACATGCCTAAG...TGGGCAAGGAAGTGGCTTCAGAGGACGTCCAGCCTCAGCTGGCCCCACGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CAA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCCCCCTGTGAAGACCTaGCCCAAGGCCACATTGAGG +
Preference number: 5 (lower is better)
Translates to: PHPGASNRWCGHTVVLWAPPVKT*PKATLR
Trigger: CCTCAATGTGGCCTTGGGCAAGGTCTTCACAGGGGG...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CAA 90 bp ACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGCTCCGCCACAGTCTGTaGGATTACCTCAGATTGCCC +
Preference number: 5 (lower is better)
Translates to: TGGVGTLWYCGLCLELSVLRHSL*DYLRLP
Trigger: GGGCAATCTGAGGTAATCCAACAGACTGTGGCGGAG...CACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397389.6
ENST00000538755.5
CDS TCA 90 bp CTGTTTCATCACCCGATACTGTCTCCAGCCGCTGGAGAAGGCCCTTaGGGTCTGCGTCTGGGGACACGCTGTACTCAGTCACGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: LFHHPILSPAAGEGP*GLRLGTRCTQSRPG
Trigger: TCCTGGCCGTGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCGGGTGATGAAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545612.5
ENST00000545976.1
CDS CCA 90 bp CTTCCAGCTCCTGCTGGTTTGGTTTTTGGAGGCAGAGATGGTGGCTaGAGGGACCCCAGCATCCCACACCCAGGTTTCCCAGGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: LPAPAGLVFGGRDGG*RDPSIPHPGFPGCH
Trigger: ATGGCAGCCTGGGAAACCTGGGTGTGGGATGCTGGGGTCCCTCCAGCCACCATCTCTGCCTCCAAAAACCAAACCAGCAGGAGCTGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420319.6
ENST00000538628.5
CDS-3UTR CAA 90 bp AACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTCTTAGGCATGTCCGATaGCTCGAAGTGCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: NRWCGHTVVLWALPGALRLRHVR*LEVLQL
Trigger: GAGCTGGAGCACTTCGAGCAATCGGACATGCCTAAG...ACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CAA 90 bp CATGGAGATGAGGCCTTTGCTTTTCAGGGTGTCTCCAGCCGCTGGAGAAGGCCCCCCCCTGTGAAGACCTaGCCCAAGGCCACATTGAGG +
Preference number: 5 (lower is better)
Translates to: HGDEAFAFQGVSSRWRRPPPVKT*PKATLR
Trigger: CCTCAATGTGGCCTTGGGCAAGGTCTTCACAGGGGG...GGGCCTTCTCCAGCGGCTGGAGACACCCTGAAAAGCAAAGGCCTCATCTCCATG
60% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS-3UTR CAA 90 bp CCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTCATGGGACAGAGGCTGTaGCGCACAGCAGAGGCTCGG +
Preference number: 5 (lower is better)
Translates to: PCPGDKCLGSYSLLSGPLMGQRL*RTAEAR
Trigger: CCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCAT...GAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS TCA 90 bp CTGGGGTGGCACAGGGTTGTTACCAGGTGGGGCCTCCCATCCTCCTaGGGCCACTGTACAGATGAAGAAACTCAACCATCTGGGCCCACA +
Preference number: 5 (lower is better)
Translates to: LGWHRVVTRWGLPSS*GHCTDEETQPSGPT
Trigger: TGTGGGCCCAGATGGTTGAGTTTCTTCATCTGTACAGTGGCCTCAGGAGGATGGGAGGCCCCACCTGGTAACAACCCTGTGCCACCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537966.5
CDS GCA 90 bp TGGGCCGGCCAGGCCTGGGCTTCAGTCTTCCTGTTTCATCACCTGTaGCATGGAGATGAGGCCTTTGCTTTTCAGGGCAGGCTCATGGCA +
Preference number: 5 (lower is better)
Translates to: WAGQAWASVFLFHHL*HGDEAFAFQGRLMA
Trigger: TGCCATGAGCCTGCCCTGAAAAGCAAAGGCCTCATCTCCATGGCACAGGTGATGAAACAGGAAGACTGAAGCCCAGGCCTGGCCGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538628.5
CDS-3UTR CAA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTTAGGCATGTCCGATaGCTCGAAGTGCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: PHPGASNRWCGHTVVLWALRHVR*LEVLQL
Trigger: GAGCTGGAGCACTTCGAGCAATCGGACATGCCTAAG...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CAA 90 bp CCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCTCCTCTGGAGGCTTCCCTaGGCTACTGGAAGGCACCCT +
Preference number: 5 (lower is better)
Translates to: PCPGDKCLGSYSLLSGPLLWRLP*ATGRHP
Trigger: AGGGTGCCTTCCAGTAGCCAAGGGAAGCCTCCAGAG...GAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000536150.5
ENST00000540324.5
CDS-3UTR CAA 90 bp CCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTCCGCCACAGTCTGTaGGATTACCTCAGATTGCCC +
Preference number: 5 (lower is better)
Translates to: PHPGASNRWCGHTVVLWALRHSL*DYLRLP
Trigger: GGGCAATCTGAGGTAATCCAACAGACTGTGGCGGAG...AGCCCACAGTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397389.6
ENST00000538755.5
CDS TCA 90 bp CGGTCCCTCCGCCACAGTCTGTTGGATTACCTCAGATTGCCCCAGTaGGTGTCTCCACCAAAACGCTCCGTCTCGCATTACTTCCGGTGG +
Preference number: 5 (lower is better)
Translates to: RSLRHSLLDYLRLPQ*VSPPKRSVSHYFRW
Trigger: CCACCGGAAGTAATGCGAGACGGAGCGTTTTGGTGGAGACACTCACTGGGGCAATCTGAGGTAATCCAACAGACTGTGGCGGAGGGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS TCA 90 bp GGCCTGGGCTTCAGTCTTCCTGTTTCATCACCTGTGCCATGGAGATaGGGCCTTTGCTTTTCAGGGTGTCTCCAGCCGCTGGAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GLGFSLPVSSPVPWR*GLCFSGCLQPLEKA
Trigger: GGCCTTCTCCAGCGGCTGGAGACACCCTGAAAAGCAAAGGCCTCATCTCCATGGCACAGGTGATGAAACAGGAAGACTGAAGCCCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535970.5
ENST00000545317.5
ENST00000545396.5
CDS GCA 90 bp GCTGTGTCCTCAAGCTGCGGACACAAATCTAACGAGGAGGAGCTGTaGAGGGGCAGGGGACTGGTACCTCTGCTAACAGCTGCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: AVSSSCGHKSNEEEL*RGRGLVPLLTAAGS
Trigger: ACTTCCAGCAGCTGTTAGCAGAGGTACCAGTCCCCTGCCCCTGCACAGCTCCTCCTCGTTAGATTTGTGTCCGCAGCTTGAGGACACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406539.6
CDS GCA 90 bp GGCGCTTCCGGTCCCTCCGCCACAGTCTGTTGGATTACCTCAGATTaGCCCAGTGAGTGTCTCCACCAAAACGCTCCGTCTCGCATTACT +
Preference number: 5 (lower is better)
Translates to: GASGPSATVCWITSD*PSECLHQNAPSRIT
Trigger: AGTAATGCGAGACGGAGCGTTTTGGTGGAGACACTCACTGGGGCAATCTGAGGTAATCCAACAGACTGTGGCGGAGGGACCGGAAGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS GCA 90 bp AGCCCTGTACGTTTCAGTTTGGATTTAGCATCTACCCCGGGTCCCTaGCTGGCGCTTCCGGTCCCTCCGCCACAGTCTGTTGGATTACCT +
Preference number: 5 (lower is better)
Translates to: SPVRFSLDLASTPGP*LALPVPPPQSVGLP
Trigger: AGGTAATCCAACAGACTGTGGCGGAGGGACCGGAAGCGCCAGGCAGGGACCCGGGGTAGATGCTAAATCCAAACTGAAACGTACAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS CCA 90 bp CTCAAGCTCAACCATCTGGGCCCACACAGGGACAGGAGACAGTCATaGCCAAGTCCTGTGTTCCAGAGGTTGCTGAGGACTCTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: LKLNHLGPHRDRRQS*PSPVFQRLLRTLLG
Trigger: TCCCAGGAGAGTCCTCAGCAACCTCTGGAACACAGGACTTGGCCATGACTGTCTCCTGTCCCTGTGTGGGCCCAGATGGTTGAGCTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS CCA 90 bp GGCTTCAGTCTTCCTGTTTCATCACCCGATACTGTCTCCAGCCGCTaGAGAAGGCCCTTGAGGTCTGCGTCTGGGGACACGCTGTACTCA +
Preference number: 5 (lower is better)
Translates to: GFSLPVSSPDTVSSR*RRPLRSASGDTLYS
Trigger: TGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCGGGTGATGAAACAGGAAGACTGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545612.5
ENST00000545976.1
CDS-3UTR CAA 90 bp AGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCAGCTGCTGGAAGTCCTaGGCGCTAACACAGCCTCGG +
Preference number: 5 (lower is better)
Translates to: RHPALEISVWEVIHSSLASCWKS*ALTQPR
Trigger: CCGAGGCTGTGTTAGCGCCAAGGACTTCCAGCAGCT...GGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CAA 90 bp AAGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCTGGCCCGGTGCGTATTaGACCACAAAGGCCCGGTGG +
Preference number: 5 (lower is better)
Translates to: KAPCPGDKCLGSYSLLSGWPGAY*TTKARW
Trigger: CCACCGGGCCTTTGTGGTCAAATACGCACCGGGCCA...GCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CAA 90 bp TGGCACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCTGGCCCGGTGCGTATTaGACCACAAAGGCCCGGTGG +
Preference number: 5 (lower is better)
Translates to: WHTVEPRSAVGCGDFISAWPGAY*TTKARW
Trigger: CCACCGGGCCTTTGTGGTCAAATACGCACCGGGCCA...GGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CAA 90 bp AGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCCCCTGTGAAGACCTaGCCCAAGGCCACATTGAGG +
Preference number: 5 (lower is better)
Translates to: RHPALEISVWEVIHSSLAPPVKT*PKATLR
Trigger: CCTCAATGTGGCCTTGGGCAAGGTCTTCACAGGGGG...GGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS-3UTR CAA 90 bp ACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTGCCTGTACGTTTCAGTTaGGATTTAGCATCTACCCCG +
Preference number: 5 (lower is better)
Translates to: TGGVGTLWYCGLCLELSVPVRFS*DLASTP
Trigger: CGGGGTAGATGCTAAATCCAAACTGAAACGTACAGG...CACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CAA 90 bp TCTGGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTGGGCACACTGTGGTACATGGAGATGAGGCCTTaGCTTTTCAGGGTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: SGPLIQEPVTGGVGTLWYMEMRP*LFRVSP
Trigger: TGGAGACACCCTGAAAAGCAAAGGCCTCATCTCCAT...GTACCACAGTGTGCCCACACCACCGGTTACTGGCTCCTGGATGAGGGGGCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540324.5
CDS CCA 90 bp ATGTACCTCAACCATCTGGGCCCACACAGGGACAGGAGACAGTCATaGCCAAGTCCTGTGTTCCAGAGGTTGCTGAGGACTCTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: MYLNHLGPHRDRRQS*PSPVFQRLLRTLLG
Trigger: TCCCAGGAGAGTCCTCAGCAACCTCTGGAACACAGGACTTGGCCATGACTGTCTCCTGTCCCTGTGTGGGCCCAGATGGTTGAGGTACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406539.6
ENST00000542037.1
CDS-3UTR CAA 90 bp AACCGGTGGTGTGGGCACACTGTGGTACTGTGGGCTCTGCCTGGAGCTCTCCGTCCTGTACGTTTCAGTTaGGATTTAGCATCTACCCCG +
Preference number: 5 (lower is better)
Translates to: NRWCGHTVVLWALPGALRPVRFS*DLASTP
Trigger: CGGGGTAGATGCTAAATCCAAACTGAAACGTACAGG...ACGGAGAGCTCCAGGCAGAGCCCACAGTACCACAGTGTGCCCACACCACCGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS-3UTR CAA 90 bp CACACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGATTTTATTTCTGCCCCCCCTGTGTTCCAGAGGTaGCTGAGGACTCTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: HTVEPRSAVGCGDFISAPPVFQR*LRTLLG
Trigger: TCCCAGGAGAGTCCTCAGCAACCTCTGGAACACAGG...GGGGGCAGAAATAAAATCCCCGCAGCCTACTGCACTTCTTGGCTCAACGGTGTG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS CCA 90 bp AAGAAACTCAACCATCTGGGCCCACACAGGGACAGGAGACAGTCATaGCCAAGTCCTGTGTTCCAGAGGTTGCTGAGGACTCTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: KKLNHLGPHRDRRQS*PSPVFQRLLRTLLG
Trigger: TCCCAGGAGAGTCCTCAGCAACCTCTGGAACACAGGACTTGGCCATGACTGTCTCCTGTCCCTGTGTGGGCCCAGATGGTTGAGTTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537966.5
CDS-3UTR CAA 90 bp AGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCTTAGGCATGTCCGATaGCTCGAAGTGCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: RHPALEISVWEVIHSSLALRHVR*LEVLQL
Trigger: GAGCTGGAGCACTTCGAGCAATCGGACATGCCTAAG...GGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000454694.6
ENST00000536150.5
ENST00000538755.5
ENST00000540324.5
CDS TCA 90 bp AGGCCTTTGCTTTTCAGGGCAGGCTCATGGCAGGTATTGAATGAATaGATGCGGATGTCCTGCTCCTGGCAGGTTGGTCCCACTGACCCT +
Preference number: 5 (lower is better)
Translates to: RPLLFRAGSWQVLNE*MRMSCSWQVGPTDP
Trigger: AGGGTCAGTGGGACCAACCTGCCAGGAGCAGGACATCCGCATTCATTCATTCAATACCTGCCATGAGCCTGCCCTGAAAAGCAAAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538628.5
CDS TCA 90 bp TCCTTGGCGCTAACACAGCCTCGGCTGCGCAGGATCCCTTTACGGTaGGAAAACCGAGGCAGAGAGAGGCCGTCATTCTTGTATTTGAAG +
Preference number: 5 (lower is better)
Translates to: SLALTQPRLRRIPLR*ENRGRERPSFLYLK
Trigger: CTTCAAATACAAGAATGACGGCCTCTCTCTGCCTCGGTTTTCTCACCGTAAAGGGATCCTGCGCAGCCGAGGCTGTGTTAGCGCCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542940.5
CDS CCA 90 bp ACAGATGAAGAAACTGAAGCCCAGAACGCCAGACAGGGCCCAGGCTaGAAGCCAAGTCTAGCCTACACTCCTGAATCTATCTGGGTCAAC +
Preference number: 5 (lower is better)
Translates to: TDEETEAQNARQGPG*KPSLAYTPESIWVN
Trigger: GTTGACCCAGATAGATTCAGGAGTGTAGGCTAGACTTGGCTTCCAGCCTGGGCCCTGTCTGGCGTTCTGGGCTTCAGTTTCTTCATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406539.6
ENST00000542037.1
CDS-3UTR CAA 90 bp AGGCACCCTGCCCTGGAGATAAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCCTGTACGTTTCAGTTaGGATTTAGCATCTACCCCG +
Preference number: 5 (lower is better)
Translates to: RHPALEISVWEVIHSSLAPVRFS*DLASTP
Trigger: CGGGGTAGATGCTAAATCCAAACTGAAACGTACAGG...GGCCAGAGAGGAGTGAATAACTTCCCAGACACTTATCTCCAGGGCAGGGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS TCA 90 bp ACTCCTGAATCTATCTGGGTCAACTGCAAGTTCCAGACTGTTAGCTaGAAGGGACTTCTAGAAGGGGACCCATCCTGTTTCAGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: TPESIWVNCKFQTVS*KGLLEGDPSCFRLP
Trigger: GGGCAGCCTGAAACAGGATGGGTCCCCTTCTAGAAGTCCCTTTCAGCTAACAGTCTGGAACTTGCAGTTGACCCAGATAGATTCAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406539.6
ENST00000542037.1
CDS TCA 90 bp AAGGAAAGAATGAAGATACCAGGCTCATGGCAGGTATTGAATGAATaGATGCGGATGTCCTGCTCCTGGCAGGTTGGTCCCACTGACCCT +
Preference number: 5 (lower is better)
Translates to: KERMKIPGSWQVLNE*MRMSCSWQVGPTDP
Trigger: AGGGTCAGTGGGACCAACCTGCCAGGAGCAGGACATCCGCATTCATTCATTCAATACCTGCCATGAGCCTGGTATCTTCATTCTTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420319.6
CDS CCA 90 bp CTGGAAGCTGTGGCTGGGATCACATCTGCTCCTGCTGTAAAAGCTTaGGCAAGGGATCCCTCTTTAAGCCTCAGCTTCTCAATCCAAAAT +
Preference number: 5 (lower is better)
Translates to: LEAVAGITSAPAVKA*ARDPSLSLSFSIQN
Trigger: ATTTTGGATTGAGAAGCTGAGGCTTAAAGAGGGATCCCTTGCCCAAGCTTTTACAGCAGGAGCAGATGTGATCCCAGCCACAGCTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406539.6
CDS CCA 72 bp GCGTTCCCAATGGACGCGGGAGGGCGGGGTCAGGTGTaGGAGGGCGACGGGGCGTGGTCTCACCGCAGCCAA +
Preference number: 6 (lower is better)
Translates to: AFPMDAGGRGQV*EGDGAWSHRSQ
Trigger: TTGGCTGCGGTGAGACCACGCCCCGTCGCCCTCCCACACCTGACCCCGCCCTCCCGCGTCCATTGGGAACGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS CCA 72 bp CCGCTGCCGCCGCTCCACCTCCTGCTCAAGCTGGGGTaGCACAGGGTTGTTACCAGGTGGGGCCTCCCATCC +
Preference number: 6 (lower is better)
Translates to: PLPPLHLLLKLG*HRVVTRWGLPS
Trigger: GGATGGGAGGCCCCACCTGGTAACAACCCTGTGCCACCCCAGCTTGAGCAGGAGGTGGAGCGGCGGCAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000406539.6
ENST00000537966.5
ENST00000540324.5
ENST00000542037.1
ENST00000545056.5
ENST00000545317.5
CDS CCA 72 bp GCTCGCCAGGAAACGGTCTGCGGAGAAAGATGCTCCTaGGCCGGGTTGGGACCGGCGGCCTCCTCGTTCCGC +
Preference number: 6 (lower is better)
Translates to: ARQETVCGERCS*AGLGPAASSFR
Trigger: GCGGAACGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGCATCTTTCTCCGCAGACCGTTTCCTGGCGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535970.5
ENST00000536150.5
CDS GCA 72 bp GCAGGATCTCGCCAGGAAACGGTCTGCGGAGAAAGATaGTCCTGGGCCGGGTTGGGACCGGCGGCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: AGSRQETVCGER*SWAGLGPAASS
Trigger: CGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGCATCTTTCTCCGCAGACCGTTTCCTGGCGAGATCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000397389.6
ENST00000406539.6
ENST00000454694.6
ENST00000538628.5
ENST00000538755.5
ENST00000542117.5
ENST00000544358.5
ENST00000545056.5
ENST00000545317.5
ENST00000545612.5
CDS GCA 72 bp GCTCAAGCTCGCCAGGAAACGGTCTGCGGAGAAAGATaGTCCTGGGCCGGGTTGGGACCGGCGGCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: AQARQETVCGER*SWAGLGPAASS
Trigger: CGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGCATCTTTCTCCGCAGACCGTTTCCTGGCGAGCTTGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535970.5
ENST00000536150.5
CDS CCA 72 bp TCTCGCCAGGAAACGGTCTGCGGAGAAAGATGCTCCTaGGCCGGGTTGGGACCGGCGGCCTCCTCGTTCCGC +
Preference number: 6 (lower is better)
Translates to: SRQETVCGERCS*AGLGPAASSFR
Trigger: GCGGAACGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGCATCTTTCTCCGCAGACCGTTTCCTGGCGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000397389.6
ENST00000406539.6
ENST00000454694.6
ENST00000538628.5
ENST00000538755.5
ENST00000542117.5
ENST00000544358.5
ENST00000544852.5
ENST00000545056.5
ENST00000545317.5
ENST00000545612.5
CDS GCA 72 bp TTCTCCTCTCGCCAGGAAACGGTCTGCGGAGAAAGATaGTCCTGGGCCGGGTTGGGACCGGCGGCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: FSSRQETVCGER*SWAGLGPAASS
Trigger: CGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGCATCTTTCTCCGCAGACCGTTTCCTGGCGAGAGGAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544852.5
CDS CAA 90 bp GCTCGCCAGGAAACGGTCTGCGGAGAAAGATGCTCCTGGGCCGGGTaGGGACCGGCGGCCTCCTCGTTCCGCCTCCCAGTTTTCCCACTA +
Preference number: 6 (lower is better)
Translates to: ARQETVCGERCSWAG*GPAASSFRLPVFPL
Trigger: TAGTGGGAAAACTGGGAGGCGGAACGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGCATCTTTCTCCGCAGACCGTTTCCTGGCGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535970.5
ENST00000536150.5
CDS GCA 72 bp CGTGCAGCCCATAGCGCGCCACGTACAAGTTATCGGTaGAGAAGCAGGCGCAGCGGCAGAAGTGCCGCGGAG +
Preference number: 6 (lower is better)
Translates to: RAAHSAPRTSYR*RSRRSGRSAAE
Trigger: CTCCGCGGCACTTCTGCCGCTGCGCCTGCTTCTGCACCGATAACTTGTACGTGGCGCGCTATGGGCTGCACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228922.11
ENST00000420319.6
ENST00000537966.5
ENST00000540324.5
ENST00000541360.5
ENST00000545033.5
ENST00000545396.5
CDS GCA 72 bp GGGTGTCTCCAGCCGCTGGAGAAGGCCCTTGAGGTCTaGGTCTGGGGACACGCTGTACTCAGTCACGGCCAG +
Preference number: 6 (lower is better)
Translates to: GCLQPLEKALEV*VWGHAVLSHGQ
Trigger: CTGGCCGTGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535970.5
ENST00000540324.5
ENST00000545317.5
ENST00000545396.5
CDS GCA 72 bp CCCTGCCCCAGCCAACAGCCTCAGCACTATCTCAGCTaGCGGGGAGTGGAAGGCAATGAGGAGAGCACCCCC +
Preference number: 6 (lower is better)
Translates to: PCPSQQPQHYLS*RGVEGNEESTP
Trigger: GGGGGTGCTCTCCTCATTGCCTTCCACTCCCCGGCAGCTGAGATAGTGCTGAGGCTGTTGGCTGGGGCAGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536439.1
CDS CCA 72 bp AAACGGTCTGCGGAGAAAGATGCTCCTGGGCCGGGTTaGGACCGGCGGCCTCCTCGTTCCGCCTCCCAGTTT +
Preference number: 6 (lower is better)
Translates to: KRSAEKDAPGPG*DRRPPRSASQF
Trigger: AAACTGGGAGGCGGAACGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGCATCTTTCTCCGCAGACCGTTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000397389.6
ENST00000406539.6
ENST00000454694.6
ENST00000535970.5
ENST00000536150.5
ENST00000538628.5
ENST00000538755.5
ENST00000542117.5
ENST00000544358.5
ENST00000544852.5
ENST00000545056.5
ENST00000545317.5
ENST00000545612.5
CDS CCA 72 bp GGAGGGCGGGGTCAGGTGTGGGAGGGCGACGGGGCGTaGTCTCACCGCAGCCAACAAATGACAACTCTTGCA +
Preference number: 6 (lower is better)
Translates to: GGRGQVWEGDGA*SHRSQQMTTLA
Trigger: TGCAAGAGTTGTCATTTGTTGGCTGCGGTGAGACCACGCCCCGTCGCCCTCCCACACCTGACCCCGCCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS CCA 72 bp ATGCGCTTCTCCTCTGTGGAAGGAGGGATGGTCTGTTaGCCTGAATGTGGCCGTGGGCCGGCCAGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: MRFSSVEGGMVC*PECGRGPARPG
Trigger: CCCAGGCCTGGCCGGCCCACGGCCACATTCAGGCCAACAGACCATCCCTCCTTCCACAGAGGAGAAGCGCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000535970.5
ENST00000536439.1
ENST00000538628.5
ENST00000538755.5
ENST00000544358.5
ENST00000545056.5
ENST00000545317.5
ENST00000545396.5
ENST00000545612.5
ENST00000545976.1
CDS CAA 90 bp TCTCGCCAGGAAACGGTCTGCGGAGAAAGATGCTCCTGGGCCGGGTaGGGACCGGCGGCCTCCTCGTTCCGCCTCCCAGTTTTCCCACTA +
Preference number: 6 (lower is better)
Translates to: SRQETVCGERCSWAG*GPAASSFRLPVFPL
Trigger: TAGTGGGAAAACTGGGAGGCGGAACGAGGAGGCCGCCGGTCCCAACCCGGCCCAGGAGCATCTTTCTCCGCAGACCGTTTCCTGGCGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000397389.6
ENST00000406539.6
ENST00000454694.6
ENST00000538628.5
ENST00000538755.5
ENST00000542117.5
ENST00000544358.5
ENST00000544852.5
ENST00000545056.5
ENST00000545317.5
ENST00000545612.5
CDS CAA 90 bp GCCAGGACCTCACCCGATACTGTCTCCAGCCGCTGGAGAAGGCCCTaGAGGTCTGCGTCTGGGGACACGCTGTACTCAGTCACGGCCAGG +
Preference number: 6 (lower is better)
Translates to: ARTSPDTVSSRWRRP*RSASGDTLYSVTAR
Trigger: CCTGGCCGTGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCGGGTGAGGTCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420319.6
ENST00000538628.5
CDS GCA 72 bp AAGTTATCGGTGCAGAAGCAGGCGCAGCGGCAGAAGTaGCGCGGAGCCCCCACCGTCGCCATAGTGAAGCAC +
Preference number: 6 (lower is better)
Translates to: KLSVQKQAQRQK*RGAPTVAIVKH
Trigger: GTGCTTCACTATGGCGACGGTGGGGGCTCCGCGGCACTTCTGCCGCTGCGCCTGCTTCTGCACCGATAACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228922.11
ENST00000420319.6
ENST00000537966.5
ENST00000545396.5
CDS GCA 72 bp CACACCCAGGTTTCCCAGGCTGCCATTCCCTGGTCCTaGCAGGTCTCAGGGCCAGGACCTCACCCGATACTG +
Preference number: 6 (lower is better)
Translates to: HTQVSQAAIPWS*QVSGPGPHPIL
Trigger: CAGTATCGGGTGAGGTCCTGGCCCTGAGACCTGGCAGGACCAGGGAATGGCAGCCTGGGAAACCTGGGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420319.6
ENST00000538628.5
CDS CCA 72 bp CAGGGGCAGGGGACTGGTACCTCTGCTAACAGCTGCTaGAAGTCCTTGGCGCTAACACAGCCTCGGCTGCGC +
Preference number: 6 (lower is better)
Translates to: QGQGTGTSANSC*KSLALTQPRLR
Trigger: GCGCAGCCGAGGCTGTGTTAGCGCCAAGGACTTCCAGCAGCTGTTAGCAGAGGTACCAGTCCCCTGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406539.6
CDS CCA 72 bp TCTCCACCAAAACGCTCCGTCTCGCATTACTTCCGGTaGCGTTCCCAATGGACGCGGGAGGGCGGGGTCAGG +
Preference number: 6 (lower is better)
Translates to: SPPKRSVSHYFR*RSQWTREGGVR
Trigger: CCTGACCCCGCCCTCCCGCGTCCATTGGGAACGCCACCGGAAGTAATGCGAGACGGAGCGTTTTGGTGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS CCA 72 bp CCCGGTAGATGCGCTTCTCCTCTGTGGAAGGAGGGATaGTCTGTTGGCCTGAATGTGGCCGTGGGCCGGCCA +
Preference number: 6 (lower is better)
Translates to: PGRCASPLWKEG*SVGLNVAVGRP
Trigger: TGGCCGGCCCACGGCCACATTCAGGCCAACAGACCATCCCTCCTTCCACAGAGGAGAAGCGCATCTACCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000535970.5
ENST00000536439.1
ENST00000538628.5
ENST00000538755.5
ENST00000544358.5
ENST00000545056.5
ENST00000545317.5
ENST00000545396.5
ENST00000545612.5
ENST00000545976.1
CDS CCA 72 bp TCGGGGGCCAGAGCTGCATCCTCTGCTAACAGCTGCTaGAAGTCCTTGGCGCTAACACAGCCTCGGCTGCGC +
Preference number: 6 (lower is better)
Translates to: SGARAASSANSC*KSLALTQPRLR
Trigger: GCGCAGCCGAGGCTGTGTTAGCGCCAAGGACTTCCAGCAGCTGTTAGCAGAGGATGCAGCTCTGGCCCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545033.5
CDS CAA 72 bp GGCCCCGATACTGTCTCCAGCCGCTGGAGAAGGCCCTaGAGGTCTGCGTCTGGGGACACGCTGTACTCAGTC +
Preference number: 6 (lower is better)
Translates to: GPDTVSSRWRRP*RSASGDTLYSV
Trigger: GACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538755.5
ENST00000541360.5
ENST00000542037.1
ENST00000544358.5
ENST00000545056.5
CDS CAA 90 bp TTCTTGCTGGGCCCCGATACTGTCTCCAGCCGCTGGAGAAGGCCCTaGAGGTCTGCGTCTGGGGACACGCTGTACTCAGTCACGGCCAGG +
Preference number: 6 (lower is better)
Translates to: FLLGPDTVSSRWRRP*RSASGDTLYSVTAR
Trigger: CCTGGCCGTGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCGGGGCCCAGCAAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538755.5
ENST00000541360.5
ENST00000542037.1
ENST00000544358.5
ENST00000545056.5
CDS CAA 90 bp ATGCGCTTCTCCTCCGATACTGTCTCCAGCCGCTGGAGAAGGCCCTaGAGGTCTGCGTCTGGGGACACGCTGTACTCAGTCACGGCCAGG +
Preference number: 6 (lower is better)
Translates to: MRFSSDTVSSRWRRP*RSASGDTLYSVTAR
Trigger: CCTGGCCGTGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCGGAGGAGAAGCGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000406539.6
ENST00000454694.6
ENST00000536150.5
ENST00000536615.5
ENST00000542117.5
ENST00000542940.5
ENST00000545033.5
CDS CAA 90 bp CAGGGGCAGGGGACTGGTACCTCTGCTAACAGCTGCTGGAAGTCCTaGGCGCTAACACAGCCTCGGCTGCGCAGGATCTCGCCAGGAAAC +
Preference number: 6 (lower is better)
Translates to: QGQGTGTSANSCWKS*ALTQPRLRRISPGN
Trigger: GTTTCCTGGCGAGATCCTGCGCAGCCGAGGCTGTGTTAGCGCCAAGGACTTCCAGCAGCTGTTAGCAGAGGTACCAGTCCCCTGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406539.6
CDS CAA 90 bp GAGGCCTTTGCTTTTCAGGGTGTCTCCAGCCGCTGGAGAAGGCCCTaGAGGTCTGCGTCTGGGGACACGCTGTACTCAGTCACGGCCAGG +
Preference number: 6 (lower is better)
Translates to: EAFAFQGVSSRWRRP*RSASGDTLYSVTAR
Trigger: CCTGGCCGTGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACACCCTGAAAAGCAAAGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535970.5
ENST00000540324.5
ENST00000545317.5
ENST00000545396.5
CDS TCA 72 bp GCCCCGATACTGTCTCCAGCCGCTGGAGAAGGCCCTTaGGGTCTGCGTCTGGGGACACGCTGTACTCAGTCA +
Preference number: 6 (lower is better)
Translates to: APILSPAAGEGP*GLRLGTRCTQS
Trigger: TGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538755.5
ENST00000541360.5
ENST00000542037.1
ENST00000544358.5
ENST00000545056.5
CDS GCA 72 bp CGCCGCTCCACCTCCTGCTCAAGCTCTGCTAACAGCTaGTGGAAGTCCTTGGCGCTAACACAGCCTCGGCTG +
Preference number: 6 (lower is better)
Translates to: RRSTSCSSSANS*WKSLALTQPRL
Trigger: CAGCCGAGGCTGTGTTAGCGCCAAGGACTTCCAGCAGCTGTTAGCAGAGCTTGAGCAGGAGGTGGAGCGGCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000228922.11
ENST00000454694.6
ENST00000538628.5
ENST00000538755.5
ENST00000541360.5
ENST00000542117.5
ENST00000542940.5
ENST00000544358.5
ENST00000545396.5
ENST00000545612.5
CDS GCA 72 bp TACTGTCTCCAGCCGCTGGAGAAGGCCCTTGAGGTCTaGGTCTGGGGACACGCTGTACTCAGTCACGGCCAG +
Preference number: 6 (lower is better)
Translates to: YCLQPLEKALEV*VWGHAVLSHGQ
Trigger: CTGGCCGTGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000406539.6
ENST00000420319.6
ENST00000454694.6
ENST00000536150.5
ENST00000536615.5
ENST00000537966.5
ENST00000538628.5
ENST00000538755.5
ENST00000541360.5
ENST00000542037.1
ENST00000542117.5
ENST00000542940.5
ENST00000544358.5
ENST00000545033.5
ENST00000545056.5
ENST00000545612.5
ENST00000545976.1
CDS GCA 72 bp CGCTGCCGCCGCTCCACCTCCTGCTCAAGCTCAGATTaGCCCAGTGAGTGTCTCCACCAAAACGCTCCGTCT +
Preference number: 6 (lower is better)
Translates to: RCRRSTSCSSSD*PSECLHQNAPS
Trigger: AGACGGAGCGTTTTGGTGGAGACACTCACTGGGGCAATCTGAGCTTGAGCAGGAGGTGGAGCGGCGGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536615.5
CDS CAA 90 bp GCTCCTGGCAGGTTGGTCCCACTGACCCTTCCAGCTCCTGCTGGTTaGGTTTTTGGAGGCAGAGATGGTGGCTGGAGGGACCCCAGCATC +
Preference number: 6 (lower is better)
Translates to: APGRLVPLTLPAPAG*VFGGRDGGWRDPSI
Trigger: GATGCTGGGGTCCCTCCAGCCACCATCTCTGCCTCCAAAAACCAAACCAGCAGGAGCTGGAAGGGTCAGTGGGACCAACCTGCCAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420319.6
ENST00000538628.5
CDS CAA 90 bp CGCTCCACCTCCTGCTCAAGCTCTGCTAACAGCTGCTGGAAGTCCTaGGCGCTAACACAGCCTCGGCTGCGCAGGATCTCGCCAGGAAAC +
Preference number: 6 (lower is better)
Translates to: RSTSCSSSANSCWKS*ALTQPRLRRISPGN
Trigger: GTTTCCTGGCGAGATCCTGCGCAGCCGAGGCTGTGTTAGCGCCAAGGACTTCCAGCAGCTGTTAGCAGAGCTTGAGCAGGAGGTGGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000454694.6
ENST00000538628.5
ENST00000538755.5
ENST00000542117.5
ENST00000544358.5
ENST00000545612.5
CDS CAA 90 bp CCTGTTTCATCACCCGATACTGTCTCCAGCCGCTGGAGAAGGCCCTaGAGGTCTGCGTCTGGGGACACGCTGTACTCAGTCACGGCCAGG +
Preference number: 6 (lower is better)
Translates to: PVSSPDTVSSRWRRP*RSASGDTLYSVTAR
Trigger: CCTGGCCGTGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCGGGTGATGAAACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545612.5
ENST00000545976.1
CDS TCA 72 bp CCTCCGATACTGTCTCCAGCCGCTGGAGAAGGCCCTTaGGGTCTGCGTCTGGGGACACGCTGTACTCAGTCA +
Preference number: 6 (lower is better)
Translates to: PPILSPAAGEGP*GLRLGTRCTQS
Trigger: TGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000406539.6
ENST00000454694.6
ENST00000536150.5
ENST00000536615.5
ENST00000542117.5
ENST00000542940.5
ENST00000545033.5
CDS TCA 72 bp GCCGTCTGCCCGGAGCTCGTGGAGAACCAGCCGAGCTaGGGACAGTTTAAAGAGCTCGGAGGTCCGACTAGT +
Preference number: 6 (lower is better)
Translates to: AVCPELVENQPS*GQFKELGGPTS
Trigger: ACTAGTCGGACCTCCGAGCTCTTTAAACTGTCCTCAGCTCGGCTGGTTCTCCACGAGCTCCGGGCAGACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000397389.6
ENST00000406539.6
ENST00000535970.5
ENST00000536150.5
ENST00000538628.5
ENST00000538755.5
ENST00000542117.5
ENST00000545056.5
ENST00000545317.5
ENST00000545612.5
CDS TCA 72 bp CACCCGATACTGTCTCCAGCCGCTGGAGAAGGCCCTTaGGGTCTGCGTCTGGGGACACGCTGTACTCAGTCA +
Preference number: 6 (lower is better)
Translates to: HPILSPAAGEGP*GLRLGTRCTQS
Trigger: TGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420319.6
ENST00000538628.5
ENST00000545612.5
ENST00000545976.1
CDS GCA 72 bp GCCCAGGGGCCTGGAAGCTGTGGCTGGGATCACATCTaGTCCTGCTGTAAAAGCTTGGGCAAGGGATCCCTC +
Preference number: 6 (lower is better)
Translates to: AQGPGSCGWDHI*SCCKSLGKGSL
Trigger: GAGGGATCCCTTGCCCAAGCTTTTACAGCAGGAGCAGATGTGATCCCAGCCACAGCTTCCAGGCCCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406539.6
ENST00000542037.1
CDS CCA 72 bp CTGCCTGGCGCTTCCGGTCCCTCCGCCACAGTCTGTTaGATTACCTCAGATTGCCCCAGTGAGTGTCTCCAC +
Preference number: 6 (lower is better)
Translates to: LPGASGPSATVC*ITSDCPSECLH
Trigger: GTGGAGACACTCACTGGGGCAATCTGAGGTAATCCAACAGACTGTGGCGGAGGGACCGGAAGCGCCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS CAA 72 bp TCCTGCTCAAGCTCTGCTAACAGCTGCTGGAAGTCCTaGGCGCTAACACAGCCTCGGCTGCGCAGGATCGGG +
Preference number: 6 (lower is better)
Translates to: SCSSSANSCWKS*ALTQPRLRRIG
Trigger: CCCGATCCTGCGCAGCCGAGGCTGTGTTAGCGCCAAGGACTTCCAGCAGCTGTTAGCAGAGCTTGAGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228922.11
ENST00000541360.5
ENST00000545396.5
CDS CAA 72 bp TCCTCCGATACTGTCTCCAGCCGCTGGAGAAGGCCCTaGAGGTCTGCGTCTGGGGACACGCTGTACTCAGTC +
Preference number: 6 (lower is better)
Translates to: SSDTVSSRWRRP*RSASGDTLYSV
Trigger: GACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000228922.11
ENST00000397389.6
ENST00000406539.6
ENST00000454694.6
ENST00000536150.5
ENST00000536615.5
ENST00000542117.5
ENST00000542940.5
ENST00000545033.5
CDS CAA 72 bp TCACCCGATACTGTCTCCAGCCGCTGGAGAAGGCCCTaGAGGTCTGCGTCTGGGGACACGCTGTACTCAGTC +
Preference number: 6 (lower is better)
Translates to: SPDTVSSRWRRP*RSASGDTLYSV
Trigger: GACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACAGTATCGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420319.6
ENST00000538628.5
ENST00000545612.5
ENST00000545976.1
CDS CAA 72 bp GCTTTTCAGGGTGTCTCCAGCCGCTGGAGAAGGCCCTaGAGGTCTGCGTCTGGGGACACGCTGTACTCAGTC +
Preference number: 6 (lower is better)
Translates to: AFQGVSSRWRRP*RSASGDTLYSV
Trigger: GACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACACCCTGAAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535970.5
ENST00000540324.5
ENST00000545317.5
ENST00000545396.5
CDS TCA 72 bp CTTTTCAGGGTGTCTCCAGCCGCTGGAGAAGGCCCTTaGGGTCTGCGTCTGGGGACACGCTGTACTCAGTCA +
Preference number: 6 (lower is better)
Translates to: LFRVSPAAGEGP*GLRLGTRCTQS
Trigger: TGACTGAGTACAGCGTGTCCCCAGACGCAGACCTCAAGGGCCTTCTCCAGCGGCTGGAGACACCCTGAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535970.5
ENST00000540324.5
ENST00000545317.5
ENST00000545396.5
CDS GCA 72 bp CGTTTCAGTTTGGATTTAGCATCTACCCCGGGTCCCTaGCTGGCGCTTCCGGTCCCTCCGCCACAGTCTGTT +
Preference number: 6 (lower is better)
Translates to: RFSLDLASTPGP*LALPVPPPQSV
Trigger: AACAGACTGTGGCGGAGGGACCGGAAGCGCCAGGCAGGGACCCGGGGTAGATGCTAAATCCAAACTGAAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397389.6
ENST00000536150.5
ENST00000538755.5
CDS CAA 72 bp TCCTGCTCAAGCTCTGCTAACAGCTGCTGGAAGTCCTaGGCGCTAACACAGCCTCGGCTGCGCAGGATCTCG +
Preference number: 6 (lower is better)
Translates to: SCSSSANSCWKS*ALTQPRLRRIS
Trigger: CGAGATCCTGCGCAGCCGAGGCTGTGTTAGCGCCAAGGACTTCCAGCAGCTGTTAGCAGAGCTTGAGCAGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000454694.6
ENST00000538628.5
ENST00000538755.5
ENST00000542117.5
ENST00000544358.5
ENST00000545612.5
CDS CAA 72 bp GACTCCCAACAAAGCACAGGCTCCATGAGGGGAAACTaGTATCTGCCTCCCACAGGAGCCCCTAGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: DSQQSTGSMRGN*YLPPTGAPSPG
Trigger: GCCTGGGCTAGGGGCTCCTGTGGGAGGCAGATACAAGTTTCCCCTCATGGAGCCTGTGCTTTGTTGGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536439.1
CDS CAA 72 bp TCCTGCTCAAGCTCTGCTAACAGCTGCTGGAAGTCCTaGGCGCTAACACAGCCTCGGCTGCGCAGGATCCCT +
Preference number: 6 (lower is better)
Translates to: SCSSSANSCWKS*ALTQPRLRRIP
Trigger: AGGGATCCTGCGCAGCCGAGGCTGTGTTAGCGCCAAGGACTTCCAGCAGCTGTTAGCAGAGCTTGAGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542940.5
CDS CAA 90 bp CACAGGGACAGGAGACAGTCATGGCCAAGTCCTGTGTTCCAGAGGTaGCTGAGGACTCTCCTGGGAAGCTTCCCACCACTGACTCCAGGG +
Preference number: 6 (lower is better)
Translates to: HRDRRQSWPSPVFQR*LRTLLGSFPPLTPG
Trigger: CCCTGGAGTCAGTGGTGGGAAGCTTCCCAGGAGAGTCCTCAGCAACCTCTGGAACACAGGACTTGGCCATGACTGTCTCCTGTCCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000406539.6
ENST00000537966.5
ENST00000542037.1
CDS CAA 90 bp TCCACCCATGACTCCCAACAAAGCACAGGCTCCATGAGGGGAAACTaGTATCTGCCTCCCACAGGAGCCCCTAGCCCAGGCTATCAGTGC +
Preference number: 6 (lower is better)
Translates to: STHDSQQSTGSMRGN*YLPPTGAPSPGYQC
Trigger: GCACTGATAGCCTGGGCTAGGGGCTCCTGTGGGAGGCAGATACAAGTTTCCCCTCATGGAGCCTGTGCTTTGTTGGGAGTCATGGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536439.1
CDS CCA 72 bp AGCTCCTGCTGGTTTGGTTTTTGGAGGCAGAGATGGTaGCTGGAGGGACCCCAGCATCCCACACCCAGGTTT +
Preference number: 6 (lower is better)
Translates to: SSCWFGFWRQRW*LEGPQHPTPRF
Trigger: AAACCTGGGTGTGGGATGCTGGGGTCCCTCCAGCCACCATCTCTGCCTCCAAAAACCAAACCAGCAGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420319.6
ENST00000538628.5
CDS TCA 72 bp AATGCGGATGTCCTGCTCCTGGCAGGTTGGTCCCACTaGCCCTTCCAGCTCCTGCTGGTTTGGTTTTTGGAG +
Preference number: 6 (lower is better)
Translates to: NADVLLLAGWSH*PFQLLLVWFLE
Trigger: CTCCAAAAACCAAACCAGCAGGAGCTGGAAGGGTCAGTGGGACCAACCTGCCAGGAGCAGGACATCCGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420319.6
ENST00000538628.5
CDS TCA 72 bp CTAACACAGCCTCGGCTGCGCAGGATCCCTTTACGGTaGGAAAACCGAGGCAGAGAGAGGCCGTCATTCTTG +
Preference number: 6 (lower is better)
Translates to: LTQPRLRRIPLR*ENRGRERPSFL
Trigger: CAAGAATGACGGCCTCTCTCTGCCTCGGTTTTCTCACCGTAAAGGGATCCTGCGCAGCCGAGGCTGTGTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542940.5
CDS GCA 72 bp TCAAGCTGCGGACACAAATCTAACGAGGAGGAGCTGTaGAGGGGCAGGGGACTGGTACCTCTGCTAACAGCT +
Preference number: 6 (lower is better)
Translates to: SSCGHKSNEEEL*RGRGLVPLLTA
Trigger: AGCTGTTAGCAGAGGTACCAGTCCCCTGCCCCTGCACAGCTCCTCCTCGTTAGATTTGTGTCCGCAGCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406539.6
CDS GCA 72 bp GGTCCCTCCGCCACAGTCTGTTGGATTACCTCAGATTaGCCCAGTGAGTGTCTCCACCAAAACGCTCCGTCT +
Preference number: 6 (lower is better)
Translates to: GPSATVCWITSD*PSECLHQNAPS
Trigger: AGACGGAGCGTTTTGGTGGAGACACTCACTGGGGCAATCTGAGGTAATCCAACAGACTGTGGCGGAGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397389.6
CDS CCA 72 bp AACCATCTGGGCCCACACAGGGACAGGAGACAGTCATaGCCAAGTCCTGTGTTCCAGAGGTTGCTGAGGACT +
Preference number: 6 (lower is better)
Translates to: NHLGPHRDRRQS*PSPVFQRLLRT
Trigger: AGTCCTCAGCAACCTCTGGAACACAGGACTTGGCCATGACTGTCTCCTGTCCCTGTGTGGGCCCAGATGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000406539.6
ENST00000537966.5
ENST00000542037.1
CDS CAA 72 bp AGGAGACAGTCATGGCCAAGTCCTGTGTTCCAGAGGTaGCTGAGGACTCTCCTGGGAAGCTTCCCACCACTG +
Preference number: 6 (lower is better)
Translates to: RRQSWPSPVFQR*LRTLLGSFPPL
Trigger: CAGTGGTGGGAAGCTTCCCAGGAGAGTCCTCAGCAACCTCTGGAACACAGGACTTGGCCATGACTGTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397389.6
ENST00000406539.6
ENST00000537966.5
ENST00000542037.1
CDS GCA 72 bp GGGCCTGGAAGCTGTGGCTGGGATCACATCTGCTCCTaGTGTAAAAGCTTGGGCAAGGGATCCCTCTTTAAG +
Preference number: 6 (lower is better)
Translates to: GPGSCGWDHICS*CKSLGKGSLFK
Trigger: CTTAAAGAGGGATCCCTTGCCCAAGCTTTTACAGCAGGAGCAGATGTGATCCCAGCCACAGCTTCCAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406539.6
ENST00000542037.1
CDS GCA 72 bp CAGGCCTGGGCTTCAGTCTTCCTGTTTCATCACCTGTaGCATGGAGATGAGGCCTTTGCTTTTCAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: QAWASVFLFHHL*HGDEAFAFQGR
Trigger: CCTGCCCTGAAAAGCAAAGGCCTCATCTCCATGGCACAGGTGATGAAACAGGAAGACTGAAGCCCAGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538628.5
CDS CAA 72 bp GCCCAGCAAGAAATCCGAAGAGAAGTGGGGCATTTTTaGCCCTACTTGGAGTTTGGCATGGCCGCAGGCCTC +
Preference number: 6 (lower is better)
Translates to: AQQEIRREVGHF*PYLEFGMAAGL
Trigger: GAGGCCTGCGGCCATGCCAAACTCCAAGTAGGGCAAAAAATGCCCCACTTCTCTTCGGATTTCTTGCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420319.6
CDS CAA 72 bp TCCTGTTTCATCACCTGTGCCATGGAGATGAGGCCTTaGCTTTTCAGGGTGTCTCCAGCCGCTGGAGAAGGC +
Preference number: 6 (lower is better)
Translates to: SCFITCAMEMRP*LFRVSPAAGEG
Trigger: GCCTTCTCCAGCGGCTGGAGACACCCTGAAAAGCAAAGGCCTCATCTCCATGGCACAGGTGATGAAACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535970.5
ENST00000545317.5
ENST00000545396.5
CDS TCA 72 bp CTTTTCAGGGCAGGCTCATGGCAGGTATTGAATGAATaGATGCGGATGTCCTGCTCCTGGCAGGTTGGTCCC +
Preference number: 6 (lower is better)
Translates to: LFRAGSWQVLNE*MRMSCSWQVGP
Trigger: GGGACCAACCTGCCAGGAGCAGGACATCCGCATTCATTCATTCAATACCTGCCATGAGCCTGCCCTGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538628.5
CDS TCA 72 bp GGCCTTTGCTTTTCAGGGCAGGCTCATGGCAGGTATTaGATGAATGAATGCGGATGTCCTGCTCCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: GLCFSGQAHGRY*MNECGCPAPGR
Trigger: CCTGCCAGGAGCAGGACATCCGCATTCATTCATTCAATACCTGCCATGAGCCTGCCCTGAAAAGCAAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538628.5
CDS TCA 72 bp CACAGGGTTGTTACCAGGTGGGGCCTCCCATCCTCCTaGGGCCACTGTACAGATGAAGAAACTCAACCATCT +
Preference number: 6 (lower is better)
Translates to: HRVVTRWGLPSS*GHCTDEETQPS
Trigger: AGATGGTTGAGTTTCTTCATCTGTACAGTGGCCTCAGGAGGATGGGAGGCCCCACCTGGTAACAACCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537966.5
CDS GCA 72 bp CAGGCCTGGGCTTCAGTCTTCCTGTTTCATCACCTGTaGCATGGAGATGAGGCCTTTGCTTTTCAGGGTGTC +
Preference number: 6 (lower is better)
Translates to: QAWASVFLFHHL*HGDEAFAFQGV
Trigger: GACACCCTGAAAAGCAAAGGCCTCATCTCCATGGCACAGGTGATGAAACAGGAAGACTGAAGCCCAGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535970.5
ENST00000545317.5
ENST00000545396.5
CDS GCA 72 bp CAAGTCGGGATCACAGAGCCAACTTCAGGCTCTCTCTaGACCTCCTTTCATCTGATGAGCCACCGAAGTCTG +
Preference number: 6 (lower is better)
Translates to: QVGITEPTSGSL*TSFHLMSHRSL
Trigger: CAGACTTCGGTGGCTCATCAGATGAAAGGAGGTGCAGAGAGAGCCTGAAGTTGGCTCTGTGATCCCGACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536439.1
ENST00000545056.5
CDS CCA 72 bp GTGGCTGGGATCACATCTGCTCCTGCTGTAAAAGCTTaGGCAAGGGATCCCTCTTTAAGCCTCAGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: VAGITSAPAVKA*ARDPSLSLSFS
Trigger: TGAGAAGCTGAGGCTTAAAGAGGGATCCCTTGCCCAAGCTTTTACAGCAGGAGCAGATGTGATCCCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406539.6
ENST00000542037.1
CDS CAA 72 bp TGTGGCTGGGATCACATCTGCTCCTGCTGTAAAAGCTaGGGCAAGGGATCCCTCTTTAAGCCTCAGCTTCTC +
Preference number: 6 (lower is better)
Translates to: CGWDHICSCCKS*GKGSLFKPQLL
Trigger: GAGAAGCTGAGGCTTAAAGAGGGATCCCTTGCCCAAGCTTTTACAGCAGGAGCAGATGTGATCCCAGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406539.6
ENST00000542037.1
CDS TCA 72 bp ATGAAGATACCAGGCTCATGGCAGGTATTGAATGAATaGATGCGGATGTCCTGCTCCTGGCAGGTTGGTCCC +
Preference number: 6 (lower is better)
Translates to: MKIPGSWQVLNE*MRMSCSWQVGP
Trigger: GGGACCAACCTGCCAGGAGCAGGACATCCGCATTCATTCATTCAATACCTGCCATGAGCCTGGTATCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420319.6
CDS TCA 72 bp CTTGCCCAGCATTTCCTGCTGGGTTTAGCCAATAAGTaGGCCCAGCAAGAAATCCGAAGAGAAGTGGGGCAT +
Preference number: 6 (lower is better)
Translates to: LAQHFLLGLANK*AQQEIRREVGH
Trigger: ATGCCCCACTTCTCTTCGGATTTCTTGCTGGGCTCACTTATTGGCTAAACCCAGCAGGAAATGCTGGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420319.6
ENST00000536439.1
CDS GCA 72 bp TTTAAAGAGCTCGGAGGTCCGACTAGTTCCCGCTGGTaGTTCAATCATCCAGCCCTGTACGTTTCAGTTTGG +
Preference number: 6 (lower is better)
Translates to: FKELGGPTSSRW*FNHPALYVSVW
Trigger: CCAAACTGAAACGTACAGGGCTGGATGATTGAAGCACCAGCGGGAACTAGTCGGACCTCCGAGCTCTTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397389.6
ENST00000406539.6
ENST00000536150.5
ENST00000538628.5
ENST00000538755.5
ENST00000542117.5
ENST00000545056.5
ENST00000545612.5
CDS CCA 72 bp CAGTTTAAAGAGCTCGGAGGTCCGACTAGTTCCCGCTaGTGCTTCAATCATCCAGCCCTGTACGTTTCAGTT +
Preference number: 6 (lower is better)
Translates to: QFKELGGPTSSR*CFNHPALYVSV
Trigger: AACTGAAACGTACAGGGCTGGATGATTGAAGCACCAGCGGGAACTAGTCGGACCTCCGAGCTCTTTAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397389.6
ENST00000406539.6
ENST00000536150.5
ENST00000538628.5
ENST00000538755.5
ENST00000542117.5
ENST00000545056.5
ENST00000545612.5
CDS CAA 72 bp TCCTGTTTCATCACCTGTGCCATGGAGATGAGGCCTTaGCTTTTCAGGGCAGGCTCATGGCAGGTATTGAAT +
Preference number: 6 (lower is better)
Translates to: SCFITCAMEMRP*LFRAGSWQVLN
Trigger: ATTCAATACCTGCCATGAGCCTGCCCTGAAAAGCAAAGGCCTCATCTCCATGGCACAGGTGATGAAACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538628.5
CDS CAA 72 bp CTCAATGGTCCCTTTAAGATCTTGGATCAGCCCTGTTaGAGTGTGCCAGCTGTCCCACACATGACACAAATA +
Preference number: 6 (lower is better)
Translates to: LNGPFKILDQPC*SVPAVPHMTQI
Trigger: TATTTGTGTCATGTGTGGGACAGCTGGCACACTCAAACAGGGCTGATCCAAGATCTTAAAGGGACCATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420319.6
CDS CAA 90 bp CATACCTGTCTCAATGGTCCCTTTAAGATCTTGGATCAGCCCTGTTaGAGTGTGCCAGCTGTCCCACACATGACACAAATATCCACTATT +
Preference number: 6 (lower is better)
Translates to: HTCLNGPFKILDQPC*SVPAVPHMTQISTI
Trigger: AATAGTGGATATTTGTGTCATGTGTGGGACAGCTGGCACACTCAAACAGGGCTGATCCAAGATCTTAAAGGGACCATTGAGACAGGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420319.6