Pregenerated sensors for OGFOD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000087263Ensembl transcript IDs: ENST00000336111.9, ENST00000561646.5, ENST00000562150.5, ENST00000563733.5, ENST00000565209.1, ENST00000565682.5, ENST00000566157.6, ENST00000568172.1, ENST00000568397.1, ENST00000569645.1, ENST00000569802.5
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACAGGCCACAATTGCAGGATGGAAAGGCAGTGGGCACTTGGAAGTaGCTACACATGGCAATAAGCAGCCTATCTTCTTTACCAACCAGA | + |
|
Preference number: 1 (lower is better) Translates to: HRPQLQDGKAVGTWK*LHMAISSLSSLPTR Trigger: TCTGGTTGGTAAAGAAGATAGGCTGCTTATTGCCATGTGTAGTCACTTCCAAGTGCCCACTGCCTTTCCATCCTGCAATTGTGGCCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR TCA 90 bp | GGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCCTCAACTCATaGAAACACATCAGAAGGCAAGTGAGTGAGATGACCTTTAGTCAG | + |
|
Preference number: 1 (lower is better) Translates to: GLPEVMPLTPFPLNS*KHIRRQVSEMTFSQ Trigger: CTGACTAAAGGTCATCTCACTCACTTGCCTTCTGATGTGTTTTCATGAGTTGAGGGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR TCA 90 bp | GCTTTCCAGAATTGGAAAATTGGCCTTGGATGGTGCCTACAGCCATaGGTCTCAAACTATTTTCCAAGCTTGGCACACATGACAGTTTCA | + |
|
Preference number: 1 (lower is better) Translates to: AFQNWKIGLGWCLQP*VSNYFPSLAHMTVS Trigger: TGAAACTGTCATGTGTGCCAAGCTTGGAAAATAGTTTGAGACTCATGGCTGTAGGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR CCA 90 bp | GTGAGGCTAAAATCATTTAATTATACACAGGCCACAATTGCAGGATaGAAAGGCAGTGGGCACTTGGAAGTGACTACACATGGCAATAAG | + |
|
Preference number: 1 (lower is better) Translates to: VRLKSFNYTQATIAG*KGSGHLEVTTHGNK Trigger: CTTATTGCCATGTGTAGTCACTTCCAAGTGCCCACTGCCTTTCCATCCTGCAATTGTGGCCTGTGTATAATTAAATGATTTTAGCCTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR CCA 90 bp | ATTCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTaGATGGTGCCTACAGCCATGAGTCTCAAACTATTTTCCAAGCTT | + |
|
Preference number: 1 (lower is better) Translates to: ILRFRFGFPELENWP*MVPTAMSLKLFSKL Trigger: AAGCTTGGAAAATAGTTTGAGACTCATGGCTGTAGGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR TCA 90 bp | GATGATGGTGATGGCTGGACAACAATGAGAATGTACTTAATCCACTaGATTGCATATTTAAAAATGGGTAAGCTGGTCAGTTTTATGTTA | + |
|
Preference number: 1 (lower is better) Translates to: DDGDGWTTMRMYLIH*IAYLKMGKLVSFML Trigger: TAACATAAAACTGACCAGCTTACCCATTTTTAAATATGCAATTCAGTGGATTAAGTACATTCTCATTGTTGTCCAGCCATCACCATCATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000336111.9 ENST00000566157.6 |
||
| 3UTR-3UTR GCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCTTCAACCAATTCTCCTaGCCCAGCCTCCTGAGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPFNQFS*PSLLSS Trigger: GCTACTCAGGAGGCTGGGGCAGGAGAATTGGTTGAA...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR-3UTR CCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCGCCACAATTGCAGGATaGAAAGGCAGTGGGCACTTG | + |
|
Preference number: 2 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPATIAG*KGSGHL Trigger: CAAGTGCCCACTGCCTTTCCATCCTGCAATTGTGGC...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR-3UTR TCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCGCCTACACTGTACTGTaGGAGTCATGGTGGAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPAYTVL*ESWWNK Trigger: CTTGTTCCACCATGACTCTCACAGTACAGTGTAGGC...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR-3UTR GCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCTACACAGGCCACAATTaGAGGATGGAAAGGCAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPYTGHN*RMERQW Trigger: CCACTGCCTTTCCATCCTGCAATTGTGGCCTGTGTA...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR-3UTR TCA 90 bp | GCTGCTGTAGATGATGTAACTGACAGCAACATCAGAGTTGGGCTCCTAGGGATTTTCCCTGGGTCTTCCTaGAGTTATGCCACTGACACC | + |
|
Preference number: 2 (lower is better) Translates to: AAVDDVTDSNIRVGLLGIFPGSS*SYATDT Trigger: GGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAA...AATCCCTAGGAGCCCAACTCTGATGTTGCTGTCAGTTACATCATCTACAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR-3UTR CCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCAGATGCACAGCCTCTTaGCATTCTGATGTGGTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPRCTAS*HSDVVL Trigger: TAAAACCACATCAGAATGCCAAGAGGCTGTGCATCT...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR-3UTR CCA 90 bp | GCTGCTGTAGATGATGTAACTGACAGCAACATCAGAGTTGGGCTCCTAGGGATTCCATGTTTGTCAGGCTaGTCTTTAACTCCTGACCTC | + |
|
Preference number: 2 (lower is better) Translates to: AAVDDVTDSNIRVGLLGIPCLSG*SLTPDL Trigger: GAGGTCAGGAGTTAAAGACCAGCCTGACAAACATGG...AATCCCTAGGAGCCCAACTCTGATGTTGCTGTCAGTTACATCATCTACAGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR-3UTR CCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCGAAACACTGGAAACATaGATGCATCTTAAAGACTTT | + |
|
Preference number: 2 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPETLET*MHLKDF Trigger: AAAGTCTTTAAGATGCATCCATGTTTCCAGTGTTTC...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR-3UTR TCA 90 bp | TCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTGGATGGTGCCAGCCTCTTGGCATTCTaGTGTGGTTTTAGCATTCCG | + |
|
Preference number: 2 (lower is better) Translates to: SKIQIWLSRIGKLALDGASLLAF*CGFSIP Trigger: CGGAATGCTAAAACCACATCAGAATGCCAAGAGGCT...GGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR-3UTR TCA 90 bp | TCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTGGATGGTGCCATTCGCAATCCCACTTaGGTGTTGCTACACTGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: SKIQIWLSRIGKLALDGAIRNPT*VLLHCG Trigger: ACCACAGTGTAGCAACACTCAAGTGGGATTGCGAAT...GGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR-3UTR CCA 90 bp | GCTGCTGTAGATGATGTAACTGACAGCAACATCAGAGTTGGGCTCCTAGGGATTAAGATGGAAAACTTCTaGAGATGGATGATGGTGATG | + |
|
Preference number: 2 (lower is better) Translates to: AAVDDVTDSNIRVGLLGIKMENF*RWMMVM Trigger: CATCACCATCATCCATCTCCAGAAGTTTTCCATCTT...AATCCCTAGGAGCCCAACTCTGATGTTGCTGTCAGTTACATCATCTACAGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR-3UTR CCA 90 bp | GCTGCTGTAGATGATGTAACTGACAGCAACATCAGAGTTGGGCTCCTAGGGATTAATGGGCACAGAATTTaGGAAGATGGAAAACTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: AAVDDVTDSNIRVGLLGINGHRI*EDGKLL Trigger: CAGAAGTTTTCCATCTTCCCAAATTCTGTGCCCATT...AATCCCTAGGAGCCCAACTCTGATGTTGCTGTCAGTTACATCATCTACAGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR-3UTR GCA 90 bp | GCTGCTGTAGATGATGTAACTGACAGCAACATCAGAGTTGGGCTCCTAGGGATTCACTGGAAACATGGATaGATCTTAAAGACTTTATGC | + |
|
Preference number: 2 (lower is better) Translates to: AAVDDVTDSNIRVGLLGIHWKHG*ILKTLC Trigger: GCATAAAGTCTTTAAGATGCATCCATGTTTCCAGTG...AATCCCTAGGAGCCCAACTCTGATGTTGCTGTCAGTTACATCATCTACAGCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR-3UTR GCA 90 bp | TCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTGGATGGTGCCTTCTCCTTGACTCCATaGTTAGCTCTTTCAGACTTC | + |
|
Preference number: 2 (lower is better) Translates to: SKIQIWLSRIGKLALDGAFSLTP*LALSDF Trigger: GAAGTCTGAAAGAGCTAAGCATGGAGTCAAGGAGAA...GGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR-3UTR CCA 90 bp | TCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTGGATGGTGCCGATGATGGTGATGGCTaGACAACAATGAGAATGTAC | + |
|
Preference number: 2 (lower is better) Translates to: SKIQIWLSRIGKLALDGADDGDG*TTMRMY Trigger: GTACATTCTCATTGTTGTCCAGCCATCACCATCATC...GGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR CAA 90 bp | GTGAGGTATTCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATaGGCCTTGGATGGTGCCTACAGCCATGAGTCTCAAACTATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: VRYSKIQIWLSRIGK*ALDGAYSHESQTIF Trigger: GAAAATAGTTTGAGACTCATGGCTGTAGGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGAATACCTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR CAA 90 bp | TATTCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTaGGATGGTGCCTACAGCCATGAGTCTCAAACTATTTTCCAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: YSKIQIWLSRIGKLA*DGAYSHESQTIFQA Trigger: AGCTTGGAAAATAGTTTGAGACTCATGGCTGTAGGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR-3UTR CAA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCGGAGGTGGGGAGTTATaGTTCAATGGGCACAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPGGGEL*FNGHRI Trigger: AATTCTGTGCCCATTGAACAATAACTCCCCACCTCC...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR-3UTR CAA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCTATTCGCAATCCCACTaGAGTGTTGCTACACTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPYSQSH*SVATLW Trigger: CCACAGTGTAGCAACACTCAAGTGGGATTGCGAATA...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCTGTAGATGATGTAACTGACAGCAACATCAGAGTTGGGCTCCTAGGGATTATACACAGGCCACAATaGCAGGATGGAAAGGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: AAVDDVTDSNIRVGLLGIIHRPQ*QDGKAV Trigger: CACTGCCTTTCCATCCTGCAATTGTGGCCTGTGTAT...AATCCCTAGGAGCCCAACTCTGATGTTGCTGTCAGTTACATCATCTACAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR-3UTR CAA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCAAACAGAAGACTCTATaGGGATGGAATGAGAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPKQKTL*GWNENS Trigger: GCTGTTCTCATTCCATCCCAATAGAGTCTTCTGTTT...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR TCA 72 bp | GAAGTTATGCCACTGACACCCTTTCCCCTCAACTCATaGAAACACATCAGAAGGCAAGTGAGTGAGATGACC | + |
|
Preference number: 3 (lower is better) Translates to: EVMPLTPFPLNS*KHIRRQVSEMT Trigger: GGTCATCTCACTCACTTGCCTTCTGATGTGTTTTCATGAGTTGAGGGGAAAGGGTGTCAGTGGCATAACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR-3UTR CAA 90 bp | TCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTGGATGGTGCCCAATGGGCACAGAATTaGGGAAGATGGAAAACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SKIQIWLSRIGKLALDGAQWAQN*GRWKTS Trigger: AGAAGTTTTCCATCTTCCCAAATTCTGTGCCCATTG...GGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR CCA 72 bp | AAATCATTTAATTATACACAGGCCACAATTGCAGGATaGAAAGGCAGTGGGCACTTGGAAGTGACTACACAT | + |
|
Preference number: 3 (lower is better) Translates to: KSFNYTQATIAG*KGSGHLEVTTH Trigger: ATGTGTAGTCACTTCCAAGTGCCCACTGCCTTTCCATCCTGCAATTGTGGCCTGTGTATAATTAAATGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR CCA 72 bp | TTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTaGATGGTGCCTACAGCCATGAGTCTCAAACTATTT | + |
|
Preference number: 3 (lower is better) Translates to: FRFGFPELENWP*MVPTAMSLKLF Trigger: AAATAGTTTGAGACTCATGGCTGTAGGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR-3UTR CAA 90 bp | TCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTGGATGGTGCCAACTATTTTCCAAGCTaGGCACACATGACAGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SKIQIWLSRIGKLALDGANYFPS*AHMTVS Trigger: TGAAACTGTCATGTGTGCCAAGCTTGGAAAATAGTT...GGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR TCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCGGCAGGAGAATTGCTTaGACCCAGGAGACAGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPGRRIA*TQETEV Trigger: GACCTCTGTCTCCTGGGTTCAAGCAATTCTCCTGCC...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR GCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCGGCTCTGGGTCTGTCTaGTCATTGCTCTGTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPGSGSV*SLLCWL Trigger: CAGCCAACAGAGCAATGAGCAGACAGACCCAGAGCC...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR TCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCCTACCTAAGAGTTGTTaGCATTGGCCCCAGGCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPLPKSC*HWPQAL Trigger: TAGGGCCTGGGGCCAATGTCAACAACTCTTAGGTAG...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR GCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCAGTGAGCCGATATCATaGCACTGTACTCCAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPSEPIS*HCTPAW Trigger: CCAGGCTGGAGTACAGTGGCATGATATCGGCTCACT...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR TCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCGTGGGCACTTGGAAGTaGCTACACATGGCAATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPVGTWK*LHMAIS Trigger: GCTTATTGCCATGTGTAGTCACTTCCAAGTGCCCAC...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCTGCTCATTGCTCTGTTaGCTGTTGTTGCTGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPCSLLC*LLLLMA Trigger: GGCCATCAGCAACAACAGCCAACAGAGCAATGAGCA...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CCA 90 bp | TCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTGGATGGTGCCTGGGCCGGGCTCCGCTaGCCGCTTCCCATTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKIQIWLSRIGKLALDGAWAGLR*PLPIHL Trigger: GAGATGAATGGGAAGCGGCCAGCGGAGCCCGGCCCA...GGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR TCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCATTCGCAATCCCACTTaGGTGTTGCTACACTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPIRNPT*VLLHCG Trigger: ACCACAGTGTAGCAACACTCAAGTGGGATTGCGAAT...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR TCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCCTTAAAGTGGAGATGTaGGGCTCTCTTCTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPLKVEM*GSLLFF Trigger: GAAGAAGAGAAGAGAGCCTCACATCTCCACTTTAAG...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR TCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCACAATCTGCTTCGGCTaGAAGTGTTCATCAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPTICFG*KCSSML Trigger: CAGCATTGATGAACACTTTCAGCCGAAGCAGATTGT...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCCCAGAATTGGAAAATTaGCCTTGGATGGTGCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPPELEN*PWMVPT Trigger: TGTAGGCACCATCCAAGGCCAATTTTCCAATTCTGG...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR TCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCTTCATCAGTTCCTTCTaGAGCCCTTCTAAGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPFISSF*SPSKKS Trigger: AGACTTCTTAGAAGGGCTTCAGAAGGAACTGATGAA...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGTAGATGATGTAACTGACAGCAACATCAGAGTTGGGCTCCTAGGGATTGCCTACACTGTACTGTaGGAGTCATGGTGGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: AAVDDVTDSNIRVGLLGIAYTVL*ESWWNK Trigger: CTTGTTCCACCATGACTCTCACAGTACAGTGTAGGC...AATCCCTAGGAGCCCAACTCTGATGTTGCTGTCAGTTACATCATCTACAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGTAGATGATGTAACTGACAGCAACATCAGAGTTGGGCTCCTAGGGATTCAAGCTTGGCACACATaGCAGTTTCACCTACCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AAVDDVTDSNIRVGLLGIQAWHT*QFHLPK Trigger: CTTGGGTAGGTGAAACTGTCATGTGTGCCAAGCTTG...AATCCCTAGGAGCCCAACTCTGATGTTGCTGTCAGTTACATCATCTACAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGTAGATGATGTAACTGACAGCAACATCAGAGTTGGGCTCCTAGGGATTGGTCTGTCTGCTCATTaGTCTGTTGGCTGTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AAVDDVTDSNIRVGLLGIGLSAH*SVGCCC Trigger: GCAACAACAGCCAACAGAGCAATGAGCAGACAGACC...AATCCCTAGGAGCCCAACTCTGATGTTGCTGTCAGTTACATCATCTACAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR GCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCTTCTCCTTGACTCCATaGTTAGCTCTTTCAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPFSLTP*LALSDF Trigger: GAAGTCTGAAAGAGCTAAGCATGGAGTCAAGGAGAA...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR GCA 90 bp | GGGCACTTGGAAGTGACTACACATGGCAATAAGCAGCCTATCTTCTTTACCAACTTCAACCAATTCTCCTaGCCCAGCCTCCTGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHLEVTTHGNKQPIFFTNFNQFS*PSLLSS Trigger: GCTACTCAGGAGGCTGGGGCAGGAGAATTGGTTGAA...GTTGGTAAAGAAGATAGGCTGCTTATTGCCATGTGTAGTCACTTCCAAGTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCGATGATGGTGATGGCTaGACAACAATGAGAATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPDDGDG*TTMRMY Trigger: GTACATTCTCATTGTTGTCCAGCCATCACCATCATC...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGTAGATGATGTAACTGACAGCAACATCAGAGTTGGGCTCCTAGGGATTACTTCAGACACCTGGTaGAAGGACACAGGAGATACT | + |
|
Preference number: 4 (lower is better) Translates to: AAVDDVTDSNIRVGLLGITSDTW*KDTGDT Trigger: AGTATCTCCTGTGTCCTTTCACCAGGTGTCTGAAGT...AATCCCTAGGAGCCCAACTCTGATGTTGCTGTCAGTTACATCATCTACAGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR TCA 90 bp | TCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTGGATGGTGCCCTGGTCTTTAACTCCTaGCCTCAGGTGATCCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKIQIWLSRIGKLALDGALVFNS*PQVIRL Trigger: CAGGCGGATCACCTGAGGTCAGGAGTTAAAGACCAG...GGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCAATGGGCACAGAATTTaGGAAGATGGAAAACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPNGHRI*EDGKLL Trigger: CAGAAGTTTTCCATCTTCCCAAATTCTGTGCCCATT...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGTAGATGATGTAACTGACAGCAACATCAGAGTTGGGCTCCTAGGGATTTTGGAAAATTGGCCTTaGATGGTGCCTACAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: AAVDDVTDSNIRVGLLGILENWP*MVPTAM Trigger: CATGGCTGTAGGCACCATCCAAGGCCAATTTTCCAA...AATCCCTAGGAGCCCAACTCTGATGTTGCTGTCAGTTACATCATCTACAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGTAGATGATGTAACTGACAGCAACATCAGAGTTGGGCTCCTAGGGATTGTTGGCTGTTGTTGCTaGTGGCCATCTGATTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: AAVDDVTDSNIRVGLLGIVGCCC*WPSDYS Trigger: AGAATAATCAGATGGCCATCAGCAACAACAGCCAAC...AATCCCTAGGAGCCCAACTCTGATGTTGCTGTCAGTTACATCATCTACAGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGTAGATGATGTAACTGACAGCAACATCAGAGTTGGGCTCCTAGGGATTTGGTGCCTACAGCCATaGGTCTCAAACTATTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AAVDDVTDSNIRVGLLGIWCLQP*VSNYFP Trigger: TGGAAAATAGTTTGAGACTCATGGCTGTAGGCACCA...AATCCCTAGGAGCCCAACTCTGATGTTGCTGTCAGTTACATCATCTACAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCAAGACTCTATTGGGATaGAATGAGAACAGCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPKTLLG*NENSIF Trigger: AAAGATGCTGTTCTCATTCCATCCCAATAGAGTCTT...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR GCA 90 bp | TCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTGGATGGTGCCTACACAGGCCACAATTaGAGGATGGAAAGGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKIQIWLSRIGKLALDGAYTGHN*RMERQW Trigger: CCACTGCCTTTCCATCCTGCAATTGTGGCCTGTGTA...GGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CCA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCGTCTCCAAAATAGTATaGTGTAAAATGGTTCGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPVSKIV*CKMVRY Trigger: GTAACGAACCATTTTACACCATACTATTTTGGAGAC...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGTAGATGATGTAACTGACAGCAACATCAGAGTTGGGCTCCTAGGGATTTTGGCTTTCCAGAATTaGAAAATTGGCCTTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: AAVDDVTDSNIRVGLLGILAFQN*KIGLGW Trigger: CCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAA...AATCCCTAGGAGCCCAACTCTGATGTTGCTGTCAGTTACATCATCTACAGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CCA 90 bp | TCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTGGATGGTGCCCAGCAACATCAGAGTTaGGCTCCTAGGGATTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKIQIWLSRIGKLALDGAQQHQS*APRDSL Trigger: GAGAGAATCCCTAGGAGCCCAACTCTGATGTTGCTG...GGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CCA 90 bp | TCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTGGATGGTGCCTGTTTCATTTTCCTCTaGCTCTGGGTCTGTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKIQIWLSRIGKLALDGACFIFL*LWVCLL Trigger: GAGCAGACAGACCCAGAGCCAGAGGAAAATGAAACA...GGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CCA 90 bp | GGGCACTTGGAAGTGACTACACATGGCAATAAGCAGCCTATCTTCTTTACCAACAGATGCACAGCCTCTTaGCATTCTGATGTGGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GHLEVTTHGNKQPIFFTNRCTAS*HSDVVL Trigger: TAAAACCACATCAGAATGCCAAGAGGCTGTGCATCT...GTTGGTAAAGAAGATAGGCTGCTTATTGCCATGTGTAGTCACTTCCAAGTGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR TCA 90 bp | TCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTGGATGGTGCCAGTCTTGGCTTTGGATaGAGTTTGGGATCACACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SKIQIWLSRIGKLALDGASLGFG*SLGSHS Trigger: ACTGTGTGATCCCAAACTTCATCCAAAGCCAAGACT...GGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR TCA 90 bp | GGGCACTTGGAAGTGACTACACATGGCAATAAGCAGCCTATCTTCTTTACCAACGGACATGTCAATGGTTaGTTCCAGGTCAATTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GHLEVTTHGNKQPIFFTNGHVNG*FQVNFR Trigger: TCTAAAATTGACCTGGAATCAACCATTGACATGTCC...GTTGGTAAAGAAGATAGGCTGCTTATTGCCATGTGTAGTCACTTCCAAGTGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR TCA 90 bp | GGGCACTTGGAAGTGACTACACATGGCAATAAGCAGCCTATCTTCTTTACCAACACTTATAGACAAACGTaGCTTTTCTTCAGACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GHLEVTTHGNKQPIFFTNTYRQT*LFFRQH Trigger: GTGCTGTCTGAAGAAAAGTCACGTTTGTCTATAAGT...GTTGGTAAAGAAGATAGGCTGCTTATTGCCATGTGTAGTCACTTCCAAGTGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CCA 90 bp | TCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTGGATGGTGCCGAAAACTTCTGGAGATaGATGATGGTGATGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKIQIWLSRIGKLALDGAENFWR*MMVMAG Trigger: TCCAGCCATCACCATCATCCATCTCCAGAAGTTTTC...GGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CCA 90 bp | GGGCACTTGGAAGTGACTACACATGGCAATAAGCAGCCTATCTTCTTTACCAACGGAGTTATTGTTCAATaGGCACAGAATTTGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GHLEVTTHGNKQPIFFTNGVIVQ*AQNLGR Trigger: TCTTCCCAAATTCTGTGCCCATTGAACAATAACTCC...GTTGGTAAAGAAGATAGGCTGCTTATTGCCATGTGTAGTCACTTCCAAGTGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| 3UTR CAA 72 bp | TCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATaGGCCTTGGATGGTGCCTACAGCCATGAGTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SKIQIWLSRIGK*ALDGAYSHESQ Trigger: TTGAGACTCATGGCTGTAGGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR TCA 90 bp | GGGCACTTGGAAGTGACTACACATGGCAATAAGCAGCCTATCTTCTTTACCAACGCACATGGGAACACTTaGTTCTTTCTTTGTTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: GHLEVTTHGNKQPIFFTNAHGNT*FFLCFI Trigger: AATGAAACAAAGAAAGAATCAAGTGTTCCCATGTGC...GTTGGTAAAGAAGATAGGCTGCTTATTGCCATGTGTAGTCACTTCCAAGTGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGTAGATGATGTAACTGACAGCAACATCAGAGTTGGGCTCCTAGGGATTGAAACACTGGAAACATaGATGCATCTTAAAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: AAVDDVTDSNIRVGLLGIETLET*MHLKDF Trigger: AAAGTCTTTAAGATGCATCCATGTTTCCAGTGTTTC...AATCCCTAGGAGCCCAACTCTGATGTTGCTGTCAGTTACATCATCTACAGCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR GCA 90 bp | TCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTGGATGGTGCCGGGCAAATTCAGCCTTaGTATGGTCATGAATTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKIQIWLSRIGKLALDGAGQIQP*YGHELK Trigger: CTTTAATTCATGACCATAGCAAGGCTGAATTTGCCC...GGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CCA 90 bp | TCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTGGATGGTGCCAAGATGGAAAACTTCTaGAGATGGATGATGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SKIQIWLSRIGKLALDGAKMENF*RWMMVM Trigger: CATCACCATCATCCATCTCCAGAAGTTTTCCATCTT...GGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS GCA 90 bp | CTGGTCCTAGCATTGTCATTAAGAGCCCAGACTCTGAAGCCAGGCTaGTTAGGTTTAACACAGGGCCCCTCCATTGGATGGGTCTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LVLALSLRAQTLKPG*LGLTQGPSIGWVCD Trigger: GTCACAGACCCATCCAATGGAGGGGCCCTGTGTTAAACCTAAGCAGCCTGGCTTCAGAGTCTGGGCTCTTAATGACAATGCTAGGACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565209.1 |
||
| CDS-3UTR CAA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCCTGCTCATTGCTCTGTaGGCTGTTGTTGCTGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPLLIAL*AVVADG Trigger: GCCATCAGCAACAACAGCCAACAGAGCAATGAGCAG...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CAA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCATTGGAAAATTGGCCTaGGATGGTGCCTACAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPIGKLA*DGAYSH Trigger: ATGGCTGTAGGCACCATCCAAGGCCAATTTTCCAAT...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CAA 90 bp | GCTGCTGTAGATGATGTAACTGACAGCAACATCAGAGTTGGGCTCCTAGGGATTCAAAATCTCATGATCTaGTGGGATGTGAGGGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: AAVDDVTDSNIRVGLLGIQNLMI*WDVRAP Trigger: CGGAGCCCTCACATCCCACAAGATCATGAGATTTTG...AATCCCTAGGAGCCCAACTCTGATGTTGCTGTCAGTTACATCATCTACAGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CAA 90 bp | CCCAAGCACTTTTCCCTGGGTCTTCCTGAAGTTATGCCACTGACACCCTTTCCCGGCACATGGGAACACTaGATTCTTTCTTTGTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PKHFSLGLPEVMPLTPFPGTWEH*ILSLFH Trigger: ATGAAACAAAGAAAGAATCAAGTGTTCCCATGTGCC...GGGAAAGGGTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CAA 90 bp | GCTGCTGTAGATGATGTAACTGACAGCAACATCAGAGTTGGGCTCCTAGGGATTGGAGGTGGGGAGTTATaGTTCAATGGGCACAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: AAVDDVTDSNIRVGLLGIGGGEL*FNGHRI Trigger: AATTCTGTGCCCATTGAACAATAACTCCCCACCTCC...AATCCCTAGGAGCCCAACTCTGATGTTGCTGTCAGTTACATCATCTACAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CAA 90 bp | GGGCACTTGGAAGTGACTACACATGGCAATAAGCAGCCTATCTTCTTTACCAACATACACAGGCCACAATaGCAGGATGGAAAGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GHLEVTTHGNKQPIFFTNIHRPQ*QDGKAV Trigger: CACTGCCTTTCCATCCTGCAATTGTGGCCTGTGTAT...GTTGGTAAAGAAGATAGGCTGCTTATTGCCATGTGTAGTCACTTCCAAGTGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CAA 90 bp | TCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTGGATGGTGCCGGGTCTGTCTGCTCATaGCTCTGTTGGCTGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SKIQIWLSRIGKLALDGAGSVCS*LCWLLL Trigger: CAACAACAGCCAACAGAGCAATGAGCAGACAGACCC...GGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS CCA 90 bp | CTGGTTAATTCAGTCATGTGTATAAGGTCCAAAGACAGAAAGATCTaGGGAAGGTCAGGATACAACCATCTGACCAATCAGCTCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVNSVMCIRSKDRKI*GRSGYNHLTNQLCW Trigger: CCAGCAGAGCTGATTGGTCAGATGGTTGTATCCTGACCTTCCCCAGATCTTTCTGTCTTTGGACCTTATACACATGACTGAATTAACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569802.5 |
||
| CDS-3UTR CAA 90 bp | GCTGCTGTAGATGATGTAACTGACAGCAACATCAGAGTTGGGCTCCTAGGGATTCAATGGGCACAGAATTaGGGAAGATGGAAAACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AAVDDVTDSNIRVGLLGIQWAQN*GRWKTS Trigger: AGAAGTTTTCCATCTTCCCAAATTCTGTGCCCATTG...AATCCCTAGGAGCCCAACTCTGATGTTGCTGTCAGTTACATCATCTACAGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CAA 90 bp | TCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTGGATGGTGCCTATTCGCAATCCCACTaGAGTGTTGCTACACTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SKIQIWLSRIGKLALDGAYSQSH*SVATLW Trigger: CCACAGTGTAGCAACACTCAAGTGGGATTGCGAATA...GGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CAA 90 bp | GCTGCTGTAGATGATGTAACTGACAGCAACATCAGAGTTGGGCTCCTAGGGATTAACTATTTTCCAAGCTaGGCACACATGACAGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AAVDDVTDSNIRVGLLGINYFPS*AHMTVS Trigger: TGAAACTGTCATGTGTGCCAAGCTTGGAAAATAGTT...AATCCCTAGGAGCCCAACTCTGATGTTGCTGTCAGTTACATCATCTACAGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CAA 90 bp | TCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTGGATGGTGCCTCCAGAATTGGAAAATaGGCCTTGGATGGTGCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: SKIQIWLSRIGKLALDGASRIGK*ALDGAY Trigger: GTAGGCACCATCCAAGGCCAATTTTCCAATTCTGGA...GGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS-3UTR CAA 90 bp | TCTAAGATTCAGATTTGGCTTTCCAGAATTGGAAAATTGGCCTTGGATGGTGCCAAACAGAAGACTCTATaGGGATGGAATGAGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SKIQIWLSRIGKLALDGAKQKTL*GWNENS Trigger: GCTGTTCTCATTCCATCCCAATAGAGTCTTCTGTTT...GGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566157.6 |
||
| CDS CCA 90 bp | AGCTATGCAAACTCAATTTCTCGGTCTCTTTCCTCCTCTACAAAGTaGGTTAACAATGTCAACAAGAATTATATGACATACACAATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SYANSISRSLSSSTK*VNNVNKNYMTYTML Trigger: CAACATTGTGTATGTCATATAATTCTTGTTGACATTGTTAACCCACTTTGTAGAGGAGGAAAGAGACCGAGAAATTGAGTTTGCATAGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563733.5 |
||
| CDS TCA 72 bp | CAGAACCACGCCACGCAGATCAAGACGCTACCTTCCTaGGGGTACTGCAACTCCCGGCATGTCCCCTTTATC | + |
|
Preference number: 6 (lower is better) Translates to: QNHATQIKTLPS*GYCNSRHVPFI Trigger: GATAAAGGGGACATGCCGGGAGTTGCAGTACCCTCAGGAAGGTAGCGTCTTGATCTGCGTGGCGTGGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000562150.5 ENST00000565682.5 |
||
| CDS CCA 72 bp | CCCAGGGAAAGAATGGGGAGTGCTAAGCCTGGGGAGTaGTTTGCAATTATAAACAGGTTGGCCAAGGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: PRERMGSAKPGE*FAIINRLAKVD Trigger: GTCTACCTTGGCCAACCTGTTTATAATTGCAAACCACTCCCCAGGCTTAGCACTCCCCATTCTTTCCCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565209.1 |
||
| CDS TCA 72 bp | AGGTTTAACACAGGGCCCCTCCATTGGATGGGTCTGTaGCTTGACAAGTTATTACCCTCTGTGCTTTATTCA | + |
|
Preference number: 6 (lower is better) Translates to: RFNTGPLHWMGL*LDKLLPSVLYS Trigger: TGAATAAAGCACAGAGGGTAATAACTTGTCAAGTCACAGACCCATCCAATGGAGGGGCCCTGTGTTAAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565209.1 |
||
| CDS TCA 72 bp | AGATTCTCATGGAAGTCCAAGTTCATCAGTTCCTTCTaGAGCCCTTCTAAGAAGTCTTGGCTTTGGATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RFSWKSKFISSF*SPSKKSWLWMK Trigger: CTTCATCCAAAGCCAAGACTTCTTAGAAGGGCTTCAGAAGGAACTGATGAACTTGGACTTCCATGAGAATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336111.9 |
||
| CDS TCA 72 bp | TACTTCTCATGGAAGTCCAAGTTCATCAGTTCCTTCTaGAGCCCTTCTAAGAAGTCTTGGCTTTGGATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: YFSWKSKFISSF*SPSKKSWLWMK Trigger: CTTCATCCAAAGCCAAGACTTCTTAGAAGGGCTTCAGAAGGAACTGATGAACTTGGACTTCCATGAGAAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000561646.5 ENST00000562150.5 ENST00000563733.5 ENST00000565682.5 ENST00000566157.6 ENST00000568172.1 ENST00000568397.1 ENST00000569645.1 ENST00000569802.5 |
||
| CDS GCA 72 bp | TTAGGTTTGTATGCTAGCTCCCTTAATTTTAAGCTATaGAAACTCAATTTCTCGGTCTCTTTCCTCCTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: LGLYASSLNFKL*KLNFSVSFLLY Trigger: GTAGAGGAGGAAAGAGACCGAGAAATTGAGTTTGCATAGCTTAAAATTAAGGGAGCTAGCATACAAACCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563733.5 |
||