RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OGDH (Homo sapiens)

Ensembl gene IDs: ENSG00000105953

Ensembl transcript IDs: ENST00000222673.6, ENST00000419661.5, ENST00000439616.6, ENST00000443864.6, ENST00000444676.5, ENST00000447398.5, ENST00000449767.5, ENST00000459672.5, ENST00000497326.1, ENST00000631326.2

Found 835 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCCCTTTCTGTGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTaGCCCGGGTCATCCTCAGTTCACGCCACGGCTGGGGCCCACCCT +
Preference number: 1 (lower is better)
Translates to: LPFLCQVRPRLSPAS*PGSSSVHATAGAHP
Trigger: AGGGTGGGCCCCAGCCGTGGCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACAGAAAGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR GCA 90 bp ACTGAAGCTGCCCTTTCTGTGCCAGGTCAGGCCAAGGCTCTCTCCTaGCAGCTGCCCCGGGTCATCCTCAGTTCACGCCACGGCTGGGGC +
Preference number: 1 (lower is better)
Translates to: TEAALSVPGQAKALS*QLPRVILSSRHGWG
Trigger: GCCCCAGCCGTGGCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACAGAAAGGGCAGCTTCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR CCA 90 bp TGGAGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTaGCTACCTGAGCGGGGCTTCCTGGCTACACACAGACTCTGTGGG +
Preference number: 1 (lower is better)
Translates to: WRVNRTKTEQPVPRW*LPERGFLATHRLCG
Trigger: CCCACAGAGTCTGTGTGTAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR CCA 90 bp AGGTGGAGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTaGTGGCTACCTGAGCGGGGCTTCCTGGCTACACACAGACTCTGT +
Preference number: 1 (lower is better)
Translates to: RWRVNRTKTEQPVPR*WLPERGFLATHRLC
Trigger: ACAGAGTCTGTGTGTAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCTCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR CCA 90 bp GTTCACGCCACGGCTGGGGCCCACCCTAGAAACCTCTGCCAGCCATaGCTAGATCCGACTCCAGGCTCCTCTACAGATTCTAAGGCTCAG +
Preference number: 1 (lower is better)
Translates to: VHATAGAHPRNLCQP*LDPTPGSSTDSKAQ
Trigger: CTGAGCCTTAGAATCTGTAGAGGAGCCTGGAGTCGGATCTAGCCATGGCTGGCAGAGGTTTCTAGGGTGGGCCCCAGCCGTGGCGTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR GCA 90 bp TCATCCTCAGTTCACGCCACGGCTGGGGCCCACCCTAGAAACCTCTaGCAGCCATGGCTAGATCCGACTCCAGGCTCCTCTACAGATTCT +
Preference number: 1 (lower is better)
Translates to: SSSVHATAGAHPRNL*QPWLDPTPGSSTDS
Trigger: AGAATCTGTAGAGGAGCCTGGAGTCGGATCTAGCCATGGCTGGCAGAGGTTTCTAGGGTGGGCCCCAGCCGTGGCGTGAACTGAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR TCA 90 bp CCTGGAACCCTCGAAGGAACAGCAGATAATGGACACTGCAGAGACTaGAGCTGCCCTTTCTGTGCCAGGTCAGGCCAAGGCTCTCTCCTG +
Preference number: 1 (lower is better)
Translates to: PGTLEGTADNGHCRD*SCPFCARSGQGSLL
Trigger: CAGGAGAGAGCCTTGGCCTGACCTGGCACAGAAAGGGCAGCTTCAGTCTCTGCAGTGTCCATTATCTGCTGTTCCTTCGAGGGTTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR TCA 90 bp CCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCCGGTGGTGGCTACCTaGGCGGGGCTTCCTGGCTAC +
Preference number: 2 (lower is better)
Translates to: PRQSSQCPGGGYLSGASWPVVAT*AGLPGY
Trigger: GTAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGG...CCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR CCA 90 bp AGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTACCCAGGAGGGGTGGGTaGGGCATGCTTGGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: RQSSQCPGGGYLSGASWLPRRGG*GMLGPH
Trigger: GTGGGGCCCAAGCATGCCCCACCCACCCCTCCTGGG...TAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR CCA 90 bp CCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCCAGTGCCCCGGTGGTaGCTACCTGAGCGGGGCTTC +
Preference number: 2 (lower is better)
Translates to: PRQSSQCPGGGYLSGASWPVPRW*LPERGF
Trigger: GAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGG...CCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR TCA 90 bp GCCCCGGGTCATCCTCAGTTCACGCCACGGCTGGGGCCCACCCTAGAAACCTCTCTGTGCCTTGCTGGGTaGCAGCGGAAGCCAGCACAC +
Preference number: 2 (lower is better)
Translates to: APGHPQFTPRLGPTLETSLCLAG*QRKPAH
Trigger: GTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAG...AGAGGTTTCTAGGGTGGGCCCCAGCCGTGGCGTGAACTGAGGATGACCCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR CCA 90 bp CAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCCACTGGTGGGGAGGATTGTaGCCAGAGCTGACCCCTCCC +
Preference number: 2 (lower is better)
Translates to: QAKALSCQLPRVILSSRHWWGGL*PELTPP
Trigger: GGGAGGGGTCAGCTCTGGCCACAATCCTCCCCACCA...GTGGCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR CCA 90 bp GGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCGCCCCACACACAGCCTaGAACCCTCGAAGGAACAGC +
Preference number: 2 (lower is better)
Translates to: GPRQSSQCPGGGYLSGASAPHTA*NPRRNS
Trigger: GCTGTTCCTTCGAGGGTTCCAGGCTGTGTGTGGGGC...GGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR CCA 90 bp AGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGTGGGCCCAGGAGGGGTaGGTGGGGCATGCTTGGGCC +
Preference number: 2 (lower is better)
Translates to: RVNRTKTEQPVPRWWLPEWAQEG*VGHAWA
Trigger: GGCCCAAGCATGCCCCACCCACCCCTCCTGGGCCCA...CTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR CCA 90 bp TGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTAGCAAGGGGCAGTCATaGGTGTGGAGAGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: CQVRPRLSPASCPGSSSVSKGQS*VWRGQW
Trigger: CCACTGCCCTCTCCACACCCATGACTGCCCCTTGCT...AACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR CCA 90 bp GGAGGTGGAGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCAGCAAGGGGCAGTCATaGGTGTGGAGAGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: GGGGLTGPRQSSQCPGGGSKGQS*VWRGQW
Trigger: CCACTGCCCTCTCCACACCCATGACTGCCCCTTGCT...GCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCTCCACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR CCA 90 bp GAGACTGAAGCTGCCCTTTCTGTGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGGCAGCGTGTGGCCTGTaGGGCAGCCAAGCACTGGAG +
Preference number: 2 (lower is better)
Translates to: ETEAALSVPGQAKALSCQAACGL*GSQALE
Trigger: CTCCAGTGCTTGGCTGCCCCACAGGCCACACGCTGC...CTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACAGAAAGGGCAGCTTCAGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR TCA 90 bp TCATCCTCAGTTCACGCCACGGCTGGGGCCCACCCTAGAAACCTCTGCCAGCCAGATTGTGGCCAGAGCTaGCCCCTCCCCAAGGACATC +
Preference number: 2 (lower is better)
Translates to: SSSVHATAGAHPRNLCQPDCGQS*PLPKDI
Trigger: GATGTCCTTGGGGAGGGGTCAGCTCTGGCCACAATC...TGGCTGGCAGAGGTTTCTAGGGTGGGCCCCAGCCGTGGCGTGAACTGAGGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR TCA 90 bp GGAGGTGGAGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCGGACACTGCAGAGACTaGAGCTGCCCTTTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: GGGGLTGPRQSSQCPGGGGHCRD*SCPFCA
Trigger: GGCACAGAAAGGGCAGCTTCAGTCTCTGCAGTGTCC...GCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCTCCACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR CCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAAGCAAGGGGCAGTCATaGGTGTGGAGAGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTSKGQS*VWRGQW
Trigger: CCACTGCCCTCTCCACACCCATGACTGCCCCTTGCT...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
3UTR-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAAGGAGGGCGGTGGTGTaGGCAGCGCTGAGGCACTAT +
Preference number: 2 (lower is better)
Translates to: LWGSQALEGDDSLTPMRARRAVV*AALRHY
Trigger: ATAGTGCCTCAGCGCTGCCCACACCACCGCCCTCCT...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
3UTR CAA 90 bp AGGGCAGTGGCCCAAGCAACCCTAGGCAGCATCTACGAGAAGTTCTaGAAGACGTCCAGGTCGAAGGCCGTGTCCAGGAGGCGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: RAVAQATLGSIYEKF*KTSRSKAVSRRRCS
Trigger: GCTGCAGCGCCTCCTGGACACGGCCTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGATGCTGCCTAGGGTTGCTTGGGCCACTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631326.2
3UTR-3UTR GCA 90 bp AGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGAAGCTGCCCTTTCTGTaGCAGGTCAGGCCAAGGCTC +
Preference number: 2 (lower is better)
Translates to: RVNRTKTEQPVPRWWLPEKLPFL*QVRPRL
Trigger: GAGCCTTGGCCTGACCTGGCACAGAAAGGGCAGCTT...CTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR GCA 90 bp ATACAGGAGCCTGTGCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGGCCTCCTGGAAAACTaGTCAGAAGTCAGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: IQEPVPCWVTAEASTQGPGLLEN*SEVSRA
Trigger: GGCTCTGCTGACTTCTGAGCAGTTTTCCAGGAGGCC...TGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR GCA 90 bp CAGCCATGGCTAGATCCGACTCCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTCAGGAGCCTGTGCCTTaGTGGGTGACAGCGGAAGCC +
Preference number: 2 (lower is better)
Translates to: QPWLDPTPGSSTDSKAQAQEPVP*WVTAEA
Trigger: GGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTG...AGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGGAGTCGGATCTAGCCATGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR GCA 90 bp AGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCACCCTAGAAACCTCTaGCAGCCATGGCTAGATCCG +
Preference number: 2 (lower is better)
Translates to: RVNRTKTEQPVPRWWLPEHPRNL*QPWLDP
Trigger: CGGATCTAGCCATGGCTGGCAGAGGTTTCTAGGGTG...CTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR CCA 90 bp CAGCCATGGCTAGATCCGACTCCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTGAGCCTGTGCCTTGCTaGGTGACAGCGGAAGCCAGC +
Preference number: 2 (lower is better)
Translates to: QPWLDPTPGSSTDSKAQAEPVPC*VTAEAS
Trigger: GCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTC...AGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGGAGTCGGATCTAGCCATGGCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR TCA 90 bp GTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCCGCACTATTCTTTAGTTaGGAAGCAAGGGGCAGTCAT +
Preference number: 2 (lower is better)
Translates to: VRPRLSPASCPGSSSVHAALFFS*EARGSH
Trigger: ATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGC...GGCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR TCA 90 bp GGAGGTGGAGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCGCACTATTCTTTAGTTaGGAAGCAAGGGGCAGTCAT +
Preference number: 2 (lower is better)
Translates to: GGGGLTGPRQSSQCPGGGALFFS*EARGSH
Trigger: ATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGC...GCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCTCCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR CCA 90 bp CCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCGCAGCGTGTGGCCTGTaGGGCAGCCAAGCACTGGAG +
Preference number: 2 (lower is better)
Translates to: PGSSTDSKAQAQDEAILVAACGL*GSQALE
Trigger: CTCCAGTGCTTGGCTGCCCCACAGGCCACACGCTGC...GACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR TCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCGCACTATTCTTTAGTTaGGAAGCAAGGGGCAGTCAT +
Preference number: 2 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESALFFS*EARGSH
Trigger: ATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGC...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
3UTR-3UTR CCA 90 bp CCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCAGGAGGGCGGTGGTGTaGGCAGCGCTGAGGCACTAT +
Preference number: 2 (lower is better)
Translates to: PGSSTDSKAQAQDEAILVRRAVV*AALRHY
Trigger: ATAGTGCCTCAGCGCTGCCCACACCACCGCCCTCCT...GACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR CAA 90 bp GCTCAAGATGAAGCTATCCTAGTCTCAAATACAGGAGCCTGTGCCTaGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTAT +
Preference number: 2 (lower is better)
Translates to: AQDEAILVSNTGACA*LGDSGSQHTRPSSY
Trigger: ATAGGAACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTGTATTTGAGACTAGGATAGCTTCATCTTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR TCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCACTATTCTTTAGTTaGGAAGCAAGGGGCAGTCAT +
Preference number: 2 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERALFFS*EARGSH
Trigger: ATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGC...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
3UTR-3UTR TCA 90 bp TCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATACAGGAGCCTGTTCTACGAGAAGTTCTTaGAGACGTCCAGGTCGAAGG +
Preference number: 2 (lower is better)
Translates to: SKAQAQDEAILVSNTGACSTRSS*RRPGRR
Trigger: CCTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGA...ACAGGCTCCTGTATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631326.2
3UTR GCA 72 bp CTGTGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTaGCCCGGGTCATCCTCAGTTCACGCCACGGCTGGG +
Preference number: 3 (lower is better)
Translates to: LCQVRPRLSPAS*PGSSSVHATAG
Trigger: CCCAGCCGTGGCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR CCA 72 bp CAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTaGCTACACACAGACTCTGTGGGCTCCAGGTGCTGC +
Preference number: 3 (lower is better)
Translates to: QCPGGGYLSGAS*LHTDSVGSRCC
Trigger: GCAGCACCTGGAGCCCACAGAGTCTGTGTGTAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR CAA 90 bp AAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTGACTGGTGGGGAGGATaGTGGCCAGAGCTGACCCCT +
Preference number: 3 (lower is better)
Translates to: KTEQPVPRWWLPERGFLADWWGG*WPELTP
Trigger: AGGGGTCAGCTCTGGCCACAATCCTCCCCACCAGTC...AGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR CAA 90 bp GGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCGACTGGTGGGGAGGATaGTGGCCAGAGCTGACCCCT +
Preference number: 3 (lower is better)
Translates to: GQAKALSCQLPRVILSSRDWWGG*WPELTP
Trigger: AGGGGTCAGCTCTGGCCACAATCCTCCCCACCAGTC...GCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR GCA 72 bp GCCCTTTCTGTGCCAGGTCAGGCCAAGGCTCTCTCCTaGCAGCTGCCCCGGGTCATCCTCAGTTCACGCCAC +
Preference number: 3 (lower is better)
Translates to: ALSVPGQAKALS*QLPRVILSSRH
Trigger: GTGGCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACAGAAAGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR GCA 72 bp GGTGGAGGGTTAACAGGACCAAGACAGAGCAGCCAGTaGCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGG +
Preference number: 3 (lower is better)
Translates to: GGGLTGPRQSSQ*PGGGYLSGASW
Trigger: CCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCTCCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR TCA 72 bp CAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTaGGCGGGGCTTCCTGGCTACACACAGACTCTGTGG +
Preference number: 3 (lower is better)
Translates to: QDRAASAPVVAT*AGLPGYTQTLW
Trigger: CCACAGAGTCTGTGTGTAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR GCA 72 bp GTTCACGCCACGGCTGGGGCCCACCCTAGAAACCTCTaGCAGCCATGGCTAGATCCGACTCCAGGCTCCTCT +
Preference number: 3 (lower is better)
Translates to: VHATAGAHPRNL*QPWLDPTPGSS
Trigger: AGAGGAGCCTGGAGTCGGATCTAGCCATGGCTGGCAGAGGTTTCTAGGGTGGGCCCCAGCCGTGGCGTGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR CCA 72 bp AACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTaGCTACCTGAGCGGGGCTTCCTGGCTACACACAGA +
Preference number: 3 (lower is better)
Translates to: NRTKTEQPVPRW*LPERGFLATHR
Trigger: TCTGTGTGTAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR CCA 72 bp GTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTaGTGGCTACCTGAGCGGGGCTTCCTGGCTACACAC +
Preference number: 3 (lower is better)
Translates to: VNRTKTEQPVPR*WLPERGFLATH
Trigger: GTGTGTAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR-3UTR CAA 90 bp AAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTATCTACGAGAAGTTCTaGAAGACGTCCAGGTCGAAG +
Preference number: 3 (lower is better)
Translates to: KTEQPVPRWWLPERGFLAIYEKF*KTSRSK
Trigger: CTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGAT...AGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631326.2
3UTR TCA 72 bp AATCAGATCTGTCCCTGTGAAGGTCAGAGTGATAAATaGGGGGCAGCTGGCCCCTTGGCCATGGCCTGGCCC +
Preference number: 3 (lower is better)
Translates to: NQICPCEGQSDK*GAAGPLAMAWP
Trigger: GGGCCAGGCCATGGCCAAGGGGCCAGCTGCCCCTCATTTATCACTCTGACCTTCACAGGGACAGATCTGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR TCA 72 bp CTCGAAGGAACAGCAGATAATGGACACTGCAGAGACTaGAGCTGCCCTTTCTGTGCCAGGTCAGGCCAAGGC +
Preference number: 3 (lower is better)
Translates to: LEGTADNGHCRD*SCPFCARSGQG
Trigger: GCCTTGGCCTGACCTGGCACAGAAAGGGCAGCTTCAGTCTCTGCAGTGTCCATTATCTGCTGTTCCTTCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCGGCTGGAGCAGCCGCTaGGTCCCGGCCGGCATACCA +
Preference number: 4 (lower is better)
Translates to: GPRQSSQCPGGGYLSGASGWSSR*VPAGIP
Trigger: TGGTATGCCGGCCGGGACCCAGCGGCTGCTCCAGCC...GGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGTGGGCCCAGGAGGGGTaGGTGGGGCATGCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: PRQSSQCPGGGYLSGASWWAQEG*VGHAWA
Trigger: GGCCCAAGCATGCCCCACCCACCCCTCCTGGGCCCA...CCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp AGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTAGGCTGGAGCAGCCGCTaGGTCCCGGCCGGCATACCA +
Preference number: 4 (lower is better)
Translates to: RQSSQCPGGGYLSGASWLGWSSR*VPAGIP
Trigger: TGGTATGCCGGCCGGGACCCAGCGGCTGCTCCAGCC...TAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCCCCAGGAGGGGTGGGTaGGGCATGCTTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GQAKALSCQLPRVILSSRPRRGG*GMLGPH
Trigger: GTGGGGCCCAAGCATGCCCCACCCACCCCTCCTGGG...GCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCCACGGCTGGGGCTGTGCCTTGCTGGGTaGCAGCGGAAGCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: GSLLPAAPGHPQFTPRLGLCLAG*QRKPAH
Trigger: GTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAG...CCCCAGCCGTGGCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGCCCTTTCTGTGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTGGAGGGGCAGGACATaGTCCTGGGCTGCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: LPFLCQVRPRLSPASCPGWRGRT*SWAARP
Trigger: TGGACGGGCAGCCCAGGAGCATGTCCTGCCCCTCCA...CCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACAGAAAGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GGAGGTGGAGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCCCGGTGGTGGCTACCTaGGCGGGGCTTCCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: GGGGLTGPRQSSQCPGGGPVVAT*AGLPGY
Trigger: GTAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGG...GCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCTCCACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCCCCCACCATGTCGCGTaGTTTGCGCTCCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GQAKALSCQLPRVILSSRPHHVA*FALPGE
Trigger: CTCACCCGGGAGCGCAAAGCACGCGACATGGTGGGG...GCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCGGTGGGTCTTCTTGTTaGCGGTGGCTGGAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: GPRQSSQCPGGGYLSGASGGSSC*RWLEQP
Trigger: CGGCTGCTCCAGCCACCGGCAACAAGAAGACCCACC...GGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222673.6
CDS-3UTR GCA 90 bp ACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTACAGCCAAGGCTCTCTCCTaGCAGCTGCCCCGGGTCATC +
Preference number: 4 (lower is better)
Translates to: TEQPVPRWWLPERGFLATAKALS*QLPRVI
Trigger: GATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGC...TGTAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCCCTCCGTCAGACCCGTaGAGGGGCAGGACATGCTCC +
Preference number: 4 (lower is better)
Translates to: GQAKALSCQLPRVILSSRPPSDP*RGRTCS
Trigger: GGAGCATGTCCTGCCCCTCCACGGGTCTGACGGAGG...GCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCGGCTGGAGCAGCCGCTaGGTCCCGGCCGGCATACCA +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESGWSSR*VPAGIP
Trigger: TGGTATGCCGGCCGGGACCCAGCGGCTGCTCCAGCC...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCGCAGCGTGTGGCCTGTaGGGCAGCCAAGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: GQAKALSCQLPRVILSSRAACGL*GSQALE
Trigger: CTCCAGTGCTTGGCTGCCCCACAGGCCACACGCTGC...GCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCTGGGTGGGGCATGCTTaGGCCCCACACACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GQAKALSCQLPRVILSSRWVGHA*APHTAW
Trigger: CCAGGCTGTGTGTGGGGCCCAAGCATGCCCCACCCA...GCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp TGTGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTGGGTGGGGCATGCTTaGGCCCCACACACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CARSGQGSLLPAAPGHPQWVGHA*APHTAW
Trigger: CCAGGCTGTGTGTGGGGCCCAAGCATGCCCCACCCA...CTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAGCTGCCCGTCCAGGGTaGAGAAGCCAGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTAARPG*RSQARE
Trigger: CTCCCTGGCCTGGCTTCTTCACCCTGGACGGGCAGC...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp TGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCGGGCTTGGCGCGGCTaGTGGTGGTCCGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: CQVRPRLSPASCPGSSSVRAWRG*WWSEVL
Trigger: CAAGACTTCGGACCACCATCAGCCGCGCCAAGCCCG...AACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp CCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGGATTGTGGCCAGAGCTaGCCCCTCCCCAAGGACATC +
Preference number: 4 (lower is better)
Translates to: PRQSSQCPGGGYLSGASWDCGQS*PLPKDI
Trigger: GATGTCCTTGGGGAGGGGTCAGCTCTGGCCACAATC...CCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp CTGCCCTTTCTGTGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGGATTGTGGCCAGAGCTaGCCCCTCCCCAAGGACATC +
Preference number: 4 (lower is better)
Translates to: LPFLCQVRPRLSPASCPGDCGQS*PLPKDI
Trigger: GATGTCCTTGGGGAGGGGTCAGCTCTGGCCACAATC...CCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACAGAAAGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp AAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTCTGTGCCTTGCTGGGTaGCAGCGGAAGCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: KTEQPVPRWWLPERGFLALCLAG*QRKPAH
Trigger: GTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAG...AGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGCCCTTTCTGTGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGCTTGTGATGGCCACCTaGCCCACCATGTCGCGTGCT +
Preference number: 4 (lower is better)
Translates to: LPFLCQVRPRLSPASCPGLVMAT*PTMSRA
Trigger: AGCACGCGACATGGTGGGGCAGGTGGCCATCACAAG...CCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACAGAAAGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCCACCAGGGACTGTGCATaGGCCACAGCAGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VRPRLSPASCPGSSSVHATRDCA*ATAARE
Trigger: CTCCCTGGCTGCTGTGGCCCATGCACAGTCCCTGGT...GGCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCCCCCGCTCCACGTCCTaGCCGCTCAGCCGAATGTGG +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESPRSTS*PLSRMW
Trigger: CCACATTCGGCTGAGCGGCCAGGACGTGGAGCGGGG...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTGCAAGAACCGCTCTaGGCGGGCGGAGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: PRQSSQCPGGGYLSGASWLQEPL*AGGGMF
Trigger: GAACATTCCTCCGCCCGCCCAGAGCGGTTCTTGCAG...CCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGGCTGGAGCAGCCGCTaGGTCCCGGCCGGCATACCA +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAGWSSR*VPAGIP
Trigger: TGGTATGCCGGCCGGGACCCAGCGGCTGCTCCAGCC...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp ACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTACAGAGCCTGTGCCTTGCTaGGTGACAGCGGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TEQPVPRWWLPERGFLATEPVPC*VTAEAS
Trigger: GCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTC...TGTAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp ACAGGAGCCTGTGCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTCCAGTGCCCCGGTGGTaGCTACCTGAGCGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: TGACALLGDSGSQHTRPSPVPRW*LPERGF
Trigger: GAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGG...ACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp AGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCAGCCAGTGCCCCGGTaGTGGCTACCTGAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: RVNRTKTEQPVPRWWLPEQPVPR*WLPERG
Trigger: GCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTG...CTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp AGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTATCTCCAGCCGACGGATaGTCTCCCGCAGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: RQSSQCPGGGYLSGASWLSPADG*SPAEEV
Trigger: CACTTCCTCTGCGGGAGATCATCCGTCGGCTGGAGA...TAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCCACGGCTGGGGAGCCTCGGGGTCATCTaGGTTCACGTGGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: GSLLPAAPGHPQFTPRLGSLGVI*VHVENG
Trigger: CCCATTTTCCACGTGAACTCAGATGACCCCGAGGCT...CCCCAGCCGTGGCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGCTGCCCGTCCAGGGTaGAGAAGCCAGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAAARPG*RSQARE
Trigger: CTCCCTGGCCTGGCTTCTTCACCCTGGACGGGCAGC...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACACGGGCTTGGCGCGGCTaGTGGTGGTCCGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTRAWRG*WWSEVL
Trigger: CAAGACTTCGGACCACCATCAGCCGCGCCAAGCCCG...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGACGGGCTTGGCGCGGCTaGTGGTGGTCCGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRRAWRG*WWSEVL
Trigger: CAAGACTTCGGACCACCATCAGCCGCGCCAAGCCCG...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCGGACACTGCAGAGACTaGAGCTGCCCTTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: GPRQSSQCPGGGYLSGASGHCRD*SCPFCA
Trigger: GGCACAGAAAGGGCAGCTTCAGTCTCTGCAGTGTCC...GGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCTCAGCTCCACCCGAATaGGGCGCCGACACCCCACTC +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESSAPPE*GADTPL
Trigger: GAGTGGGGTGTCGGCGCCTCATTCGGGTGGAGCTGA...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
CDS-3UTR GCA 90 bp ACGGCTGGGGCCCACCCTAGAAACCTCTGCCAGCCATGGCTAGATCCGACTCCAGACTCTGGTAGGCAGTaGCCGGTGGGGCTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: TAGAHPRNLCQPWLDPTPDSGRQ*PVGLRH
Trigger: ATGCCGGAGCCCCACCGGGCACTGCCTACCAGAGTC...TGGAGTCGGATCTAGCCATGGCTGGCAGAGGTTTCTAGGGTGGGCCCCAGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGGTCCACGTTGGGCTGTaGTTCTACCAGGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: PRQSSQCPGGGYLSGASWVHVGL*FYQGLC
Trigger: GCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGAC...CCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGCCCTTTCTGTGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGGTTCGGCTTTGGTCTTaGCCATCACCACGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LPFLCQVRPRLSPASCPGVRLWS*PSPRGQ
Trigger: CTGACCCCGTGGTGATGGGCAAGACCAAAGCCGAAC...CCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACAGAAAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGGTTCGGCTTTGGTCTTaGCCATCACCACGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PRQSSQCPGGGYLSGASWVRLWS*PSPRGQ
Trigger: CTGACCCCGTGGTGATGGGCAAGACCAAAGCCGAAC...CCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp TGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCGTCCTTGTGGAAGGTaGTCCTCCACTCGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: CQVRPRLSPASCPGSSSVRPCGR*SSTRPP
Trigger: TGGCGGCCGAGTGGAGGAGCACCTTCCACAAGGACG...AACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGATGGAGGGGCAGGACATaGTCCTGGGCTGCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRWRGRT*SWAARP
Trigger: TGGACGGGCAGCCCAGGAGCATGTCCTGCCCCTCCA...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGTGTCCAGGAGGCGCTaGAGCTCCGTCAGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRVSRRR*SSVRWV
Trigger: GACCCACCTGACGGAGCTGCAGCGCCTCCTGGACAC...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
CDS-3UTR GCA 90 bp GCCCCGGGTCATCCTCAGTTCACGCCACGGCTGGGGCCCACCCTAGAAACCTCTCTCTCTCCTGCCAGCTaGCCCGGGTCATCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: APGHPQFTPRLGPTLETSLSPAS*PGSSSV
Trigger: AACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAG...AGAGGTTTCTAGGGTGGGCCCCAGCCGTGGCGTGAACTGAGGATGACCCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCCACGACTGCACTGCCAGGTaGTCCTCCACGAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: QAKALSCQLPRVILSSRHDCTAR*SSTSLS
Trigger: GGACAAGCTCGTGGAGGACCACCTGGCAGTGCAGTC...GTGGCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCTCAGCGGCCTCAAGGTaGGAAGGGTTGGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: GQAKALSCQLPRVILSSRSAASR*EGLATK
Trigger: CTTGGTGGCCAACCCTTCCCACCTTGAGGCCGCTGA...GCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp TGTGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGCCGCTCAGCCGAATGTaGATGCCCTCCTTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: CARSGQGSLLPAAPGHPQPLSRM*MPSFRS
Trigger: GCTCCTGAAGGAGGGCATCCACATTCGGCTGAGCGG...CTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCACCCCGCTCCACGTCCTaGCCGCTCAGCCGAATGTGG +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAPRSTS*PLSRMW
Trigger: CCACATTCGGCTGAGCGGCCAGGACGTGGAGCGGGG...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp ACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTACACTGCAAGAACCGCTCTaGGCGGGCGGAGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: TEQPVPRWWLPERGFLATLQEPL*AGGGMF
Trigger: GAACATTCCTCCGCCCGCCCAGAGCGGTTCTTGCAG...TGTAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCCACAGCAAGGGGCAGTCATaGGTGTGGAGAGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QAKALSCQLPRVILSSRHSKGQS*VWRGQW
Trigger: CCACTGCCCTCTCCACACCCATGACTGCCCCTTGCT...GTGGCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCAGCAAGGGGCAGTCATaGGTGTGGAGAGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GQAKALSCQLPRVILSSRSKGQS*VWRGQW
Trigger: CCACTGCCCTCTCCACACCCATGACTGCCCCTTGCT...GCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp ACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTACAGGACACTGCAGAGACTaGAGCTGCCCTTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: TEQPVPRWWLPERGFLATGHCRD*SCPFCA
Trigger: GGCACAGAAAGGGCAGCTTCAGTCTCTGCAGTGTCC...TGTAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp AAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTGGTCAGAGTGATAAATaGGGGGCAGCTGGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: KTEQPVPRWWLPERGFLAGQSDK*GAAGPL
Trigger: CAAGGGGCCAGCTGCCCCTCATTTATCACTCTGACC...AGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCCGTCCTTGTGGAAGGTaGTCCTCCACTCGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESRPCGR*SSTRPP
Trigger: TGGCGGCCGAGTGGAGGAGCACCTTCCACAAGGACG...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCATGGAGGGGCAGGACATaGTCCTGGGCTGCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAWRGRT*SWAARP
Trigger: TGGACGGGCAGCCCAGGAGCATGTCCTGCCCCTCCA...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGAATGTTCTGGACCCATaGCCTCCATGCCATGGGGCA +
Preference number: 4 (lower is better)
Translates to: PRQSSQCPGGGYLSGASWNVLDP*PPCHGA
Trigger: TGCCCCATGGCATGGAGGGCATGGGTCCAGAACATT...CCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCACCCCACCATGTCGCGTaGTTTGCGCTCCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAPHHVA*FALPGE
Trigger: CTCACCCGGGAGCGCAAAGCACGCGACATGGTGGGG...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGGTGGGTCTTCTTGTTaGCGGTGGCTGGAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRGGSSC*RWLEQP
Trigger: CGGCTGCTCCAGCCACCGGCAACAAGAAGACCCACC...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
CDS-3UTR GCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGACAGGAGCCTGTGCCTTaGTGGGTGACAGCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRQEPVP*WVTAEA
Trigger: GGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTG...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GGAGGTGGAGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCCTCTCTCCTGCCAGCTaGCCCGGGTCATCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: GGGGLTGPRQSSQCPGGGLSPAS*PGSSSV
Trigger: AACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAG...GCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCTCCACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCAAGCTGCCCTTTCTGTaGCAGGTCAGGCCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: GQAKALSCQLPRVILSSRKLPFL*QVRPRL
Trigger: GAGCCTTGGCCTGACCTGGCACAGAAAGGGCAGCTT...GCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGACAGAGCAGCCAGTaGCCCGGTGGTGGCTACCTG +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESRQSSQ*PGGGYL
Trigger: CAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCT...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp TCATCCTCAGTTCACGCCACGGCTGGGGCCCACCCTAGAAACCTCTGCCAGCCAAGACAGAGCAGCCAGTaGCCCGGTGGTGGCTACCTG +
Preference number: 4 (lower is better)
Translates to: SSSVHATAGAHPRNLCQPRQSSQ*PGGGYL
Trigger: CAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCT...TGGCTGGCAGAGGTTTCTAGGGTGGGCCCCAGCCGTGGCGTGAACTGAGGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAGTAGGCAGTGCCCGGTaGGGCTCCGGCATTCGTGTT +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTVGSAR*GSGIRV
Trigger: AACACGAATGCCGGAGCCCCACCGGGCACTGCCTAC...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAACCAGGGACTGTGCATaGGCCACAGCAGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRTRDCA*ATAARE
Trigger: CTCCCTGGCTGCTGTGGCCCATGCACAGTCCCTGGT...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGACAACCACGTCCTTGTaGAAGGTGCTCCTCCACTCG +
Preference number: 4 (lower is better)
Translates to: PRQSSQCPGGGYLSGASWTTTSL*KVLLHS
Trigger: CGAGTGGAGGAGCACCTTCCACAAGGACGTGGTTGT...CCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCACCTCCGTCAGACCCGTaGAGGGGCAGGACATGCTCC +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAPPSDP*RGRTCS
Trigger: GGAGCATGTCCTGCCCCTCCACGGGTCTGACGGAGG...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAAGCACATGGTGGCGGTaGCTGAATGTGCCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTSTWWR*LNVPRS
Trigger: GGAGCGGGGCACATTCAGCCACCGCCACCATGTGCT...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCCACTGCAGGGCCATCTTCTaGGATCACCCGCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: QAKALSCQLPRVILSSRHCRAIF*DHPLEV
Trigger: CACTTCCAGCGGGTGATCCCAGAAGATGGCCCTGCA...GTGGCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp TCATCCTCAGTTCACGCCACGGCTGGGGCCCACCCTAGAAACCTCTGCCAGCCAAGGAGGGCGGTGGTGTaGGCAGCGCTGAGGCACTAT +
Preference number: 4 (lower is better)
Translates to: SSSVHATAGAHPRNLCQPRRAVV*AALRHY
Trigger: ATAGTGCCTCAGCGCTGCCCACACCACCGCCCTCCT...TGGCTGGCAGAGGTTTCTAGGGTGGGCCCCAGCCGTGGCGTGAACTGAGGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGCAGCGTGTGGCCTGTaGGGCAGCCAAGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAAACGL*GSQALE
Trigger: CTCCAGTGCTTGGCTGCCCCACAGGCCACACGCTGC...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACATGGTGGGGAGGATTGTaGCCAGAGCTGACCCCTCCC +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTWWGGL*PELTPP
Trigger: GGGAGGGGTCAGCTCTGGCCACAATCCTCCCCACCA...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000222673.6
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGATGGTGGGGAGGATTGTaGCCAGAGCTGACCCCTCCC +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRWWGGL*PELTPP
Trigger: GGGAGGGGTCAGCTCTGGCCACAATCCTCCCCACCA...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000222673.6
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp TGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCCGCAGAGGAAGTGCTaGTTCCTGTCCCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: CQVRPRLSPASCPGSSSVPQRKC*FLSPDE
Trigger: TTCATCGGGGGACAGGAATCAGCACTTCCTCTGCGG...AACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACATCTCCAGCCGACGGATaGTCTCCCGCAGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTSPADG*SPAEEV
Trigger: CACTTCCTCTGCGGGAGATCATCCGTCGGCTGGAGA...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAAGCCGATCTGGTTGTTaGCGACCACGTGCACGGTGC +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRSRSGC*RPRARC
Trigger: GCACCGTGCACGTGGTCGTCAACAACCAGATCGGCT...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp ACAGGAGCCTGTGCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTGCTGCTCAATCCTTGTaGTGGCCACCTGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: TGACALLGDSGSQHTRPSAAQSL*WPPAPP
Trigger: TGGTGGGGCAGGTGGCCATCACAAGGATTGAGCAGC...ACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCGATTGTGGCCAGAGCTaGCCCCTCCCCAAGGACATC +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESDCGQS*PLPKDI
Trigger: GATGTCCTTGGGGAGGGGTCAGCTCTGGCCACAATC...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000222673.6
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCACGTCCTTGTGGAAGGTaGTCCTCCACTCGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRARPCGR*SSTRPP
Trigger: TGGCGGCCGAGTGGAGGAGCACCTTCCACAAGGACG...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCTGGTTGACCACACCCTaGGACACCAGCAGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESWLTTP*DTSSSA
Trigger: CGCTGAGCTGCTGGTGTCGCAGGGTGTGGTCAACCA...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCCCCGGGTCATCCTCAGTTCACGCCACGGCTGGGGCCCACCCTAGAAACCTCTAATGTTCTGGACCCATaGCCTCCATGCCATGGGGCA +
Preference number: 4 (lower is better)
Translates to: APGHPQFTPRLGPTLETSNVLDP*PPCHGA
Trigger: TGCCCCATGGCATGGAGGGCATGGGTCCAGAACATT...AGAGGTTTCTAGGGTGGGCCCCAGCCGTGGCGTGAACTGAGGATGACCCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp AGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTATCATCGTTGCACATCTaGAAGAACCGCTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: RQSSQCPGGGYLSGASWLSSLHI*KNRSGR
Trigger: CCGCCCAGAGCGGTTCTTGCAGATGTGCAACGATGA...TAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCCACCACCCTAGAAACCTCTaGCAGCCATGGCTAGATCCG +
Preference number: 4 (lower is better)
Translates to: QAKALSCQLPRVILSSRHHPRNL*QPWLDP
Trigger: CGGATCTAGCCATGGCTGGCAGAGGTTTCTAGGGTG...GTGGCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTATCCTAGTGCCAAGGCTCTCTCCTaGCAGCTGCCCCGGGTCATC +
Preference number: 4 (lower is better)
Translates to: ALLGDSGSQHTRPSSYPSAKALS*QLPRVI
Trigger: GATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGC...ACTAGGATAGGAACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGTAGGCAGTGCCCGGTaGGGCTCCGGCATTCGTGTT +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAVGSAR*GSGIRV
Trigger: AACACGAATGCCGGAGCCCCACCGGGCACTGCCTAC...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACATCAGCGGCCTCAAGGTaGGAAGGGTTGGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTSAASR*EGLATK
Trigger: CTTGGTGGCCAACCCTTCCCACCTTGAGGCCGCTGA...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGTCGTACACAATGCCCTaGCCAGCAAATGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: PRQSSQCPGGGYLSGASWSYTMP*PANAAS
Trigger: GGATGCTGCATTTGCTGGCCAGGGCATTGTGTACGA...CCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTATCCTAGTCCTCCGTCAGACCCGTaGAGGGGCAGGACATGCTCC +
Preference number: 4 (lower is better)
Translates to: ALLGDSGSQHTRPSSYPSPPSDP*RGRTCS
Trigger: GGAGCATGTCCTGCCCCTCCACGGGTCTGACGGAGG...ACTAGGATAGGAACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCCCGCTCAGCCGAATGTaGATGCCCTCCTTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESPLSRM*MPSFRS
Trigger: GCTCCTGAAGGAGGGCATCCACATTCGGCTGAGCGG...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp ACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTACATCCACATTCTGGTCATaGAGCACATGGTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: TEQPVPRWWLPERGFLATSTFWS*STWWRW
Trigger: CCACCGCCACCATGTGCTCCATGACCAGAATGTGGA...TGTAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAGGCGGAGGAATGTTCTaGACCCATGCCCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTGGGMF*THALHA
Trigger: GGCATGGAGGGCATGGGTCCAGAACATTCCTCCGCC...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACACTGCAAGAACCGCTCTaGGCGGGCGGAGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTLQEPL*AGGGMF
Trigger: GAACATTCCTCCGCCCGCCCAGAGCGGTTCTTGCAG...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGATCTGGCCTCGGGGTaGCGCAACAGGGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRADLASG*RNRDLG
Trigger: CCCCAAATCCCTGTTGCGCCACCCCGAGGCCAGATC...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGATCACCCGCTGGAAGTaGGTTCCTGGAAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: PRQSSQCPGGGYLSGASWITRWK*VPGSIS
Trigger: TGAGATGCTTCCAGGAACCCACTTCCAGCGGGTGAT...CCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTATCCTAGTGCAGCGTGTGGCCTGTaGGGCAGCCAAGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: ALLGDSGSQHTRPSSYPSAACGL*GSQALE
Trigger: CTCCAGTGCTTGGCTGCCCCACAGGCCACACGCTGC...ACTAGGATAGGAACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCCCGCAGAGGAAGTGCTaGTTCCTGTCCCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESPQRKC*FLSPDE
Trigger: TTCATCGGGGGACAGGAATCAGCACTTCCTCTGCGG...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACACATACTCAGGCTGGTTaGCCACACCCTGCGACACCA +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTHTQAG*PHPATP
Trigger: TGGTGTCGCAGGGTGTGGTCAACCAGCCTGAGTATG...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGACTCTGGTAGGCAGTaGCCGGTGGGGCTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGADSGRQ*PVGLRH
Trigger: ATGCCGGAGCCCCACCGGGCACTGCCTACCAGAGTC...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCGTTCGGCTTTGGTCTTaGCCATCACCACGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESVRLWS*PSPRGQ
Trigger: CTGACCCCGTGGTGATGGGCAAGACCAAAGCCGAAC...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACATCAGCCGAATGTGGATaGCCTCCTTCAGGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTSAECG*PPSGAS
Trigger: GCTCGCTCCTGAAGGAGGGCATCCACATTCGGCTGA...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCCAGACAGTGAGCTGTTaGACACAGTATAGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GQAKALSCQLPRVILSSRQTVSC*TQYRGP
Trigger: AGGCCCCCTATACTGTGTGCAACAGCTCACTGTCTG...GCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp AGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTATTCTGGGTTCTGAGCTaGAGGGCCATCTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RQSSQCPGGGYLSGASWLFWVLS*RAIFWD
Trigger: ATCCCAGAAGATGGCCCTGCAGCTCAGAACCCAGAA...TAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCACCCCACCATGTCGCGTaGTTTGCGCTCCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAPHHVA*FALPGE
Trigger: CTCACCCGGGAGCGCAAAGCACGCGACATGGTGGGG...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GGAGGTGGAGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCGCATTGGGGTACTTCTaGACCTCCTTCAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GGGGLTGPRQSSQCPGGGALGYF*TSFSRR
Trigger: CCTCCTGCTGAAGGAGGTGCAGAAGTACCCCAATGC...GCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCTCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTGTCCAGGAGGCGCTaGAGCTCCGTCAGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAVSRRR*SSVRWV
Trigger: GACCCACCTGACGGAGCTGCAGCGCCTCCTGGACAC...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
CDS-3UTR CCA 90 bp GCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTATCCTAGTGTAGGCAGTGCCCGGTaGGGCTCCGGCATTCGTGTT +
Preference number: 4 (lower is better)
Translates to: ALLGDSGSQHTRPSSYPSVGSAR*GSGIRV
Trigger: AACACGAATGCCGGAGCCCCACCGGGCACTGCCTAC...ACTAGGATAGGAACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGAACTCCTCAAACCTaGTGGACCGCACAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VNRTKTEQPVPRWWLPERGTPQT*WTAQAW
Trigger: CCAGGCTTGTGCGGTCCACCAGGTTTGAGGAGTTCC...CCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGACAGCCGCCCTCTGTGTaGCATGCCCATGATCACGTA +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRQPPSV*HAHDHV
Trigger: TACGTGATCATGGGCATGCCACACAGAGGGCGGCTG...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGCCCTTTCTGTGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGAAAACTGTTCGGCTTTaGTCTTGCCCATCACCACGG +
Preference number: 4 (lower is better)
Translates to: LPFLCQVRPRLSPASCPGKTVRL*SCPSPR
Trigger: CCGTGGTGATGGGCAAGACCAAAGCCGAACAGTTTT...CCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACAGAAAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp AGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTATCGTACACAATGCCCTaGCCAGCAAATGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: RQSSQCPGGGYLSGASWLSYTMP*PANAAS
Trigger: GGATGCTGCATTTGCTGGCCAGGGCATTGTGTACGA...TAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCCACAGTTCACGTGGAAAATaGGGGCATTCACCACTCGGG +
Preference number: 4 (lower is better)
Translates to: QAKALSCQLPRVILSSRHSSRGK*GHSPLG
Trigger: CCCGAGTGGTGAATGCCCCCATTTTCCACGTGAACT...GTGGCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GGAGGTGGAGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCACAACCACGTCCTTGTaGAAGGTGCTCCTCCACTCG +
Preference number: 4 (lower is better)
Translates to: GGGGLTGPRQSSQCPGGGTTTSL*KVLLHS
Trigger: CGAGTGGAGGAGCACCTTCCACAAGGACGTGGTTGT...GCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCTCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACATCATGGAGCACATGGTaGCGGTGGCTGAATGTGCCC +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTSWSTW*RWLNVP
Trigger: GGGCACATTCAGCCACCGCCACCATGTGCTCCATGA...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCCCCGGGCAGATGAACTaGTCGATGATACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESPGQMN*SMIHWA
Trigger: GGCCCAGTGTATCATCGACCAGTTCATCTGCCCGGG...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGACATCAAAGCTGGATCTaGCCTCGGGGTGGCGCAACA +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRHQSWI*PRGGAT
Trigger: TGTTGCGCCACCCCGAGGCCAGATCCAGCTTTGATG...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp ACAGGAGCCTGTGCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTCATCAAAGCTGGATCTaGCCTCGGGGTGGCGCAACA +
Preference number: 4 (lower is better)
Translates to: TGACALLGDSGSQHTRPSHQSWI*PRGGAT
Trigger: TGTTGCGCCACCCCGAGGCCAGATCCAGCTTTGATG...ACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAGCATCTCATCAAAGCTaGATCTGGCCTCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTASHQS*IWPRGG
Trigger: GCCACCCCGAGGCCAGATCCAGCTTTGATGAGATGC...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp AGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTAATCACCCGCTGGAAGTaGGTTCCTGGAAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: RQSSQCPGGGYLSGASWLITRWK*VPGSIS
Trigger: TGAGATGCTTCCAGGAACCCACTTCCAGCGGGTGAT...TAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGGCTGGAGCAGCCGCTaGGTCCCGGCCGGCATACCA +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEGWSSR*VPAGIP
Trigger: TGGTATGCCGGCCGGGACCCAGCGGCTGCTCCAGCC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp TTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGTGCAGCTCCGTCAGGTaGGTCTTCTTGTTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: LTGPRQSSQCPGGGYLSGCSSVR*VFLLPV
Trigger: CACCGGCAACAAGAAGACCCACCTGACGGAGCTGCA...CCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222673.6
CDS-3UTR CCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGATGCAGCTCCGTCAGGTaGGTCTTCTTGTTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRCSSVR*VFLLPV
Trigger: CACCGGCAACAAGAAGACCCACCTGACGGAGCTGCA...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
CDS-3UTR CCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACATGCAGCTCCGTCAGGTaGGTCTTCTTGTTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTCSSVR*VFLLPV
Trigger: CACCGGCAACAAGAAGACCCACCTGACGGAGCTGCA...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
CDS-3UTR CCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGCAGCGTGTGGCCTGTaGGGCAGCCAAGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAAACGL*GSQALE
Trigger: CTCCAGTGCTTGGCTGCCCCACAGGCCACACGCTGC...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp ACAGGAGCCTGTGCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTAACCTCTGCCAGCCATaGCTAGATCCGACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TGACALLGDSGSQHTRPSNLCQP*LDPTPG
Trigger: GCCTGGAGTCGGATCTAGCCATGGCTGGCAGAGGTT...ACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GAGACTGAAGCTGCCCTTTCTGTGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGGCCCCACACACAGCCTaGAACCCTCGAAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: ETEAALSVPGQAKALSCQAPHTA*NPRRNS
Trigger: GCTGTTCCTTCGAGGGTTCCAGGCTGTGTGTGGGGC...CTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACAGAAAGGGCAGCTTCAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp AGAAACCTCTGCCAGCCATGGCTAGATCCGACTCCAGGCTCCTCTACAGATTCTTGGGCCCAGGAGGGGTaGGTGGGGCATGCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RNLCQPWLDPTPGSSTDSWAQEG*VGHAWA
Trigger: GGCCCAAGCATGCCCCACCCACCCCTCCTGGGCCCA...AGAATCTGTAGAGGAGCCTGGAGTCGGATCTAGCCATGGCTGGCAGAGGTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACACTGAGCGGGGCTTCCTaGCTACACACAGACTCTGTG +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTLSGAS*LHTDSV
Trigger: CACAGAGTCTGTGTGTAGCCAGGAAGCCCCGCTCAG...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGCAGCCAGTGCCCCGGTaGTGGCTACCTGAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEQPVPR*WLPERG
Trigger: GCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTG...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp ATACAGGAGCCTGTGCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCACCGCAGAGGAAGTGCTaGTTCCTGTCCCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: IQEPVPCWVTAEASTQGPPQRKC*FLSPDE
Trigger: TTCATCGGGGGACAGGAATCAGCACTTCCTCTGCGG...TGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAAGCCTCGGGGTCATCTaGGTTCACGTGGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRSLGVI*VHVENG
Trigger: CCCATTTTCCACGTGAACTCAGATGACCCCGAGGCT...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACACTTTGCACACGTACATaGCAGCCTCGGGGTCATCTG +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTLCTRT*QPRGHL
Trigger: CAGATGACCCCGAGGCTGTCATGTACGTGTGCAAAG...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGCTTTGCACACGTACATaGCAGCCTCGGGGTCATCTG +
Preference number: 4 (lower is better)
Translates to: VNRTKTEQPVPRWWLPERLCTRT*QPRGHL
Trigger: CAGATGACCCCGAGGCTGTCATGTACGTGTGCAAAG...CCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCACATACTCAGGCTGGTTaGCCACACCCTGCGACACCA +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAHTQAG*PHPATP
Trigger: TGGTGTCGCAGGGTGTGGTCAACCAGCCTGAGTATG...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp AGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCATACTCAGGCTGGTTaGCCACACCCTGCGACACCA +
Preference number: 4 (lower is better)
Translates to: RVNRTKTEQPVPRWWLPEHTQAG*PHPATP
Trigger: TGGTGTCGCAGGGTGTGGTCAACCAGCCTGAGTATG...CTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGCTGCCCGTCCAGGGTaGAGAAGCCAGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEAARPG*RSQARE
Trigger: CTCCCTGGCCTGGCTTCTTCACCCTGGACGGGCAGC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCGGCTCAGCCCTCCATaGATAGTAAAGTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: PRQSSQCPGGGYLSGASWRLSPP*IVKFST
Trigger: TGTGGAAAACTTTACTATTCATGGAGGGCTGAGCCG...CCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp CAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCCACCAGGAGTGGAGCAGTTaGCAACAACCCAATTGCAGT +
Preference number: 4 (lower is better)
Translates to: QAKALSCQLPRVILSSRHQEWSS*QQPNCS
Trigger: ACTGCAATTGGGTTGTTGTCAACTGCTCCACTCCTG...GTGGCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GGAGGTGGAGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCCTTTGCGCTCCCGGGTaGGGTCATAATACACTTTGC +
Preference number: 4 (lower is better)
Translates to: GGGGLTGPRQSSQCPGGGLCAPG*GHNTLC
Trigger: GCAAAGTGTATTATGACCTCACCCGGGAGCGCAAAG...GCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCTCCACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp TGTGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTCTACGAGAAGTTCTTaGAGACGTCCAGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: CARSGQGSLLPAAPGHPQSTRSS*RRPGRR
Trigger: CCTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGA...CTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGACTCCTCTCCCTCTTCTaGCCTGCTTTGGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRLLSLF*PALAQQ
Trigger: TTGCTGTGCCAAAGCAGGTCAGAAGAGGGAGAGGAG...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCTCAGCTCCACCCGAATaGGGCGCCGACACCCCACTC +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVSAPPE*GADTPL
Trigger: GAGTGGGGTGTCGGCGCCTCATTCGGGTGGAGCTGA...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
CDS-3UTR TCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCACCTCCAGCCGACGGATaGTCTCCCGCAGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAPPADG*SPAEEV
Trigger: CACTTCCTCTGCGGGAGATCATCCGTCGGCTGGAGG...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439616.6
CDS-3UTR GCA 90 bp AGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTACTCAGCAGCAACAGGTaGAGAATAGCACCGAATCTG +
Preference number: 4 (lower is better)
Translates to: RQSSQCPGGGYLSGASWLLSSNR*RIAPNL
Trigger: CAGATTCGGTGCTATTCTGCACCTGTTGCTGCTGAG...TAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GAGACTGAAGCTGCCCTTTCTGTGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGTTCTACCAGGGACTGTaGATGGGCCACAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: ETEAALSVPGQAKALSCQFYQGL*MGHSSQ
Trigger: CTGGCTGCTGTGGCCCATGCACAGTCCCTGGTAGAA...CTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACAGAAAGGGCAGCTTCAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCATTCTACCAGGGACTGTaGATGGGCCACAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAFYQGL*MGHSSQ
Trigger: CTGGCTGCTGTGGCCCATGCACAGTCCCTGGTAGAA...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGCCCTGGCCAGCAAATaGAGCATCCCCATGCAACAG +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAALASK*SIPMQQ
Trigger: CTGTTGCATGGGGATGCTGCATTTGCTGGCCAGGGC...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAAATGTTCTGGACCCATaGCCTCCATGCCATGGGGCA +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTNVLDP*PPCHGA
Trigger: TGCCCCATGGCATGGAGGGCATGGGTCCAGAACATT...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GGAGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGTCATCGTTGCACATCTaGAAGAACCGCTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: GGLTGPRQSSQCPGGGYLSSLHI*KNRSGR
Trigger: CCGCCCAGAGCGGTTCTTGCAGATGTGCAACGATGA...CAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACATCATCGTTGCACATCTaGAAGAACCGCTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTSSLHI*KNRSGR
Trigger: CCGCCCAGAGCGGTTCTTGCAGATGTGCAACGATGA...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp AAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTCATCTGGGTCATCGTTaGACATCTGCAAGAACCGCT +
Preference number: 4 (lower is better)
Translates to: KTEQPVPRWWLPERGFLAHLGHR*TSARTA
Trigger: AGCGGTTCTTGCAGATGTGCAACGATGACCCAGATG...AGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCCCCCACCATGTCGCGTaGTTTGCGCTCCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVPHHVA*FALPGE
Trigger: CTCACCCGGGAGCGCAAAGCACGCGACATGGTGGGG...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAGGGAATGGCGACAGCTaGTCAATCCTTGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTGNGDS*SILVMA
Trigger: GGCCATCACAAGGATTGAGCAGCTGTCGCCATTCCC...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGGGAATGGCGACAGCTaGTCAATCCTTGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRGNGDS*SILVMA
Trigger: GGCCATCACAAGGATTGAGCAGCTGTCGCCATTCCC...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCATTGGGGTACTTCTaGACCTCCTTCAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRALGYF*TSFSRR
Trigger: CCTCCTGCTGAAGGAGGTGCAGAAGTACCCCAATGC...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGGTGGGTCTTCTTGTTaGCGGTGGCTGGAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAGGSSC*RWLEQP
Trigger: CGGCTGCTCCAGCCACCGGCAACAAGAAGACCCACC...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
CDS-3UTR GCA 90 bp TTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGGCCTCCTGGAAAACTaGTCAGAAGTCAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LTGPRQSSQCPGGGYLSGGLLEN*SEVSRA
Trigger: GGCTCTGCTGACTTCTGAGCAGTTTTCCAGGAGGCC...CCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp ACACTGCAGAGACTGAAGCTGCCCTTTCTGTGCCAGGTCAGGCCAAGGCTCTCTCAGGAGCCTGTGCCTTaGTGGGTGACAGCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: TLQRLKLPFLCQVRPRLSQEPVP*WVTAEA
Trigger: GGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTG...AGAGAGCCTTGGCCTGACCTGGCACAGAAAGGGCAGCTTCAGTCTCTGCAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp ACGGCTGGGGCCCACCCTAGAAACCTCTGCCAGCCATGGCTAGATCCGACTCCACACCCTAGAAACCTCTaGCAGCCATGGCTAGATCCG +
Preference number: 4 (lower is better)
Translates to: TAGAHPRNLCQPWLDPTPHPRNL*QPWLDP
Trigger: CGGATCTAGCCATGGCTGGCAGAGGTTTCTAGGGTG...TGGAGTCGGATCTAGCCATGGCTGGCAGAGGTTTCTAGGGTGGGCCCCAGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGCCCTTTCTGTGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGCTCCCTCTTCTGACCTaGTTTGGCACAGCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: LPFLCQVRPRLSPASCPGLPLLT*FGTAKK
Trigger: TTTCTTTGCTGTGCCAAAGCAGGTCAGAAGAGGGAG...CCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACAGAAAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCACCCCTGACCTGATATaGCCTGATGAGCGACTGCAC +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESTPDLI*PDERLH
Trigger: GTGCAGTCGCTCATCAGGGCATATCAGGTCAGGGGT...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000447398.5
ENST00000449767.5
CDS-3UTR CCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTAGGCAGTGCCCGGTaGGGCTCCGGCATTCGTGTT +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAVGSAR*GSGIRV
Trigger: AACACGAATGCCGGAGCCCCACCGGGCACTGCCTAC...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp ACAGGAGCCTGTGCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTGTGGTGGTGGGCAAGTaGAAGACCTTGTCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: TGACALLGDSGSQHTRPSVVVGK*KTLSRS
Trigger: TGACCTCGACAAGGTCTTCCACTTGCCCACCACCAC...ACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGTGGTGGTGGGCAAGTaGAAGACCTTGTCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRVVVGK*KTLSRS
Trigger: TGACCTCGACAAGGTCTTCCACTTGCCCACCACCAC...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAACTCCTCAAACCTGGTaGACCGCACAAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRATPQTW*TAQAWP
Trigger: TGGCCAGGCTTGTGCGGTCCACCAGGTTTGAGGAGT...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGGAACTCCTCAAACCTaGTGGACCGCACAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAGTPQT*WTAQAW
Trigger: CCAGGCTTGTGCGGTCCACCAGGTTTGAGGAGTTCC...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCACAGCCGCCCTCTGTGTaGCATGCCCATGATCACGTA +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAQPPSV*HAHDHV
Trigger: TACGTGATCATGGGCATGCCACACAGAGGGCGGCTG...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTATCCTAGTTCAGCGGCCTCAAGGTaGGAAGGGTTGGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: ALLGDSGSQHTRPSSYPSSAASR*EGLATK
Trigger: CTTGGTGGCCAACCCTTCCCACCTTGAGGCCGCTGA...ACTAGGATAGGAACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCGTGGTGAAGCCGATCTaGTTGTTGACGACCACGTGC +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESVVKPI*LLTTTC
Trigger: GCACGTGGTCGTCAACAACCAGATCGGCTTCACCAC...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAGTGGTGAAGCCGATCTaGTTGTTGACGACCACGTGC +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTVVKPI*LLTTTC
Trigger: GCACGTGGTCGTCAACAACCAGATCGGCTTCACCAC...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGTGGTGAAGCCGATCTaGTTGTTGACGACCACGTGC +
Preference number: 4 (lower is better)
Translates to: VNRTKTEQPVPRWWLPERVVKPI*LLTTTC
Trigger: GCACGTGGTCGTCAACAACCAGATCGGCTTCACCAC...CCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp TGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTAGTTCACGTGGAAAATaGGGGCATTCACCACTCGGG +
Preference number: 4 (lower is better)
Translates to: CQVRPRLSPASCPGSSSVSSRGK*GHSPLG
Trigger: CCCGAGTGGTGAATGCCCCCATTTTCCACGTGAACT...AACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAACAACCACGTCCTTGTaGAAGGTGCTCCTCCACTCG +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRTTTSL*KVLLHS
Trigger: CGAGTGGAGGAGCACCTTCCACAAGGACGTGGTTGT...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGATCCTCATACTCAGGCTaGTTGACCACACCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRSSYSG*LTTPCD
Trigger: GTCGCAGGGTGTGGTCAACCAGCCTGAGTATGAGGA...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCTCCTCATACTCAGGCTaGTTGACCACACCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESSSYSG*LTTPCD
Trigger: GTCGCAGGGTGTGGTCAACCAGCCTGAGTATGAGGA...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp AAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTGCCAGAGATGGTTCATaGGGATGCAGGTTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: KTEQPVPRWWLPERGFLAARDGS*GCRFSC
Trigger: ACAAGAGAACCTGCATCCCCATGAACCATCTCTGGC...AGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCACCCGGGCAGATGAACTaGTCGATGATACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAPGQMN*SMIHWA
Trigger: GGCCCAGTGTATCATCGACCAGTTCATCTGCCCGGG...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp TGTGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGGGCTTCTTTAAGGTCTaGCAGGACATCTGGGTCATC +
Preference number: 4 (lower is better)
Translates to: CARSGQGSLLPAAPGHPQGFFKV*QDIWVI
Trigger: GATGACCCAGATGTCCTGCCAGACCTTAAAGAAGCC...CTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGTGGCGTCGTAGCACGTaGAAGAAGTTGCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: VNRTKTEQPVPRWWLPERWRRST*KKLPGV
Trigger: CACTCCTGGCAACTTCTTCCACGTGCTACGACGCCA...CCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACATGGCGTCGTAGCACGTaGAAGAAGTTGCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTWRRST*KKLPGV
Trigger: CACTCCTGGCAACTTCTTCCACGTGCTACGACGCCA...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGATGGCGTCGTAGCACGTaGAAGAAGTTGCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRWRRST*KKLPGV
Trigger: CACTCCTGGCAACTTCTTCCACGTGCTACGACGCCA...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp TCAAATACAGGAGCCTGTGCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGGATCTGGCCTCGGGGTaGCGCAACAGGGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: SNTGACALLGDSGSQHTRDLASG*RNRDLG
Trigger: CCCCAAATCCCTGTTGCGCCACCCCGAGGCCAGATC...CCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTGTATTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCACATCAAAGCTGGATCTaGCCTCGGGGTGGCGCAACA +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAHQSWI*PRGGAT
Trigger: TGTTGCGCCACCCCGAGGCCAGATCCAGCTTTGATG...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCATGCAGGGCCATCTTCTaGGATCACCCGCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRACRAIF*DHPLEV
Trigger: CACTTCCAGCGGGTGATCCCAGAAGATGGCCCTGCA...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGAGGCCAGCTCAGCATTaGGGTACTTCTGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: VNRTKTEQPVPRWWLPERRPAQH*GTSAPP
Trigger: AGGAGGTGCAGAAGTACCCCAATGCTGAGCTGGCCT...CCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGGCCAGCTCAGCATTaGGGTACTTCTGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESRPAQH*GTSAPP
Trigger: AGGAGGTGCAGAAGTACCCCAATGCTGAGCTGGCCT...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGGCTGGAGCAGCCGCTaGGTCCCGGCCGGCATACCA +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERGWSSR*VPAGIP
Trigger: TGGTATGCCGGCCGGGACCCAGCGGCTGCTCCAGCC...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCATGGTGGGGAGGATTGTaGCCAGAGCTGACCCCTCCC +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAWWGGL*PELTPP
Trigger: GGGAGGGGTCAGCTCTGGCCACAATCCTCCCCACCA...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222673.6
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCATACACACAGACTCTGTaGGCTCCAGGTGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAYTQTL*APGAAW
Trigger: CCAGGCAGCACCTGGAGCCCACAGAGTCTGTGTGTA...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAAGCCGATCTGGTTGTTaGCGACCACGTGCACGGTGC +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGASRSGC*RPRARC
Trigger: GCACCGTGCACGTGGTCGTCAACAACCAGATCGGCT...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp AGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGAGCCTCGGGGTCATCTaGGTTCACGTGGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: RVNRTKTEQPVPRWWLPESLGVI*VHVENG
Trigger: CCCATTTTCCACGTGAACTCAGATGACCCCGAGGCT...CTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCTGCCCGTCCAGGGTaGAGAAGCCAGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERAARPG*RSQARE
Trigger: CTCCCTGGCCTGGCTTCTTCACCCTGGACGGGCAGC...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp TGGCTAGATCCGACTCCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGCTGCCCGTCCAGGGTaGAGAAGCCAGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: WLDPTPGSSTDSKAQAQDAARPG*RSQARE
Trigger: CTCCCTGGCCTGGCTTCTTCACCCTGGACGGGCAGC...ATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGGAGTCGGATCTAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp TGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTGCCGTACTCAGACAGTaGGCTGTTGCACACAGTATA +
Preference number: 4 (lower is better)
Translates to: CQVRPRLSPASCPGSSSVAVLRQ*AVAHSI
Trigger: TATACTGTGTGCAACAGCTCACTGTCTGAGTACGGC...AACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCCTTTGCGCTCCCGGGTaGGGTCATAATACACTTTGC +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESLCAPG*GHNTLC
Trigger: GCAAAGTGTATTATGACCTCACCCGGGAGCGCAAAG...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGCTGCTCAATCCTTGTaGTGGCCACCTGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAAAQSL*WPPAPP
Trigger: TGGTGGGGCAGGTGGCCATCACAAGGATTGAGCAGC...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGTCAGCTCCACCCGAATaGGGCGCCGACACCCCACTC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVESAPPE*GADTPL
Trigger: GAGTGGGGTGTCGGCGCCTCATTCGGGTGGAGCTGA...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
CDS-3UTR GCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGACTCTGGTAGGCAGTaGCCGGTGGGGCTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEDSGRQ*PVGLRH
Trigger: ATGCCGGAGCCCCACCGGGCACTGCCTACCAGAGTC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACACTTCCTGATGACATTTaGAAGCACGTTCAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTLPDDI*KHVQPP
Trigger: GGGCGGCTGAACGTGCTTGCAAATGTCATCAGGAAG...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCCTTCCTGATGACATTTaGAAGCACGTTCAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESLPDDI*KHVQPP
Trigger: GGGCGGCTGAACGTGCTTGCAAATGTCATCAGGAAG...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAAGGTCTCGTACACAATaGCCTGGCCAGCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTRSRTQ*PGQQMQ
Trigger: CTGCATTTGCTGGCCAGGGCATTGTGTACGAGACCT...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCATGGTTGACCACACCCTaGGACACCAGCAGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAWLTTP*DTSSSA
Trigger: CGCTGAGCTGCTGGTGTCGCAGGGTGTGGTCAACCA...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp ACGGCTGGGGCCCACCCTAGAAACCTCTGCCAGCCATGGCTAGATCCGACTCCATTCTGGGTTCTGAGCTaGAGGGCCATCTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: TAGAHPRNLCQPWLDPTPFWVLS*RAIFWD
Trigger: ATCCCAGAAGATGGCCCTGCAGCTCAGAACCCAGAA...TGGAGTCGGATCTAGCCATGGCTGGCAGAGGTTTCTAGGGTGGGCCCCAGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCTTCTGGGTTCTGAGCTaGAGGGCCATCTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESFWVLS*RAIFWD
Trigger: ATCCCAGAAGATGGCCCTGCAGCTCAGAACCCAGAA...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp TCAAATACAGGAGCCTGTGCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCTTGTGATGGCCACCTaGCCCACCATGTCGCGTGCT +
Preference number: 4 (lower is better)
Translates to: SNTGACALLGDSGSQHTRLVMAT*PTMSRA
Trigger: AGCACGCGACATGGTGGGGCAGGTGGCCATCACAAG...CCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTGTATTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCACTTGTGATGGCCACCTaGCCCACCATGTCGCGTGCT +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGALVMAT*PTMSRA
Trigger: AGCACGCGACATGGTGGGGCAGGTGGCCATCACAAG...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGTGTCCAGGAGGCGCTaGAGCTCCGTCAGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEVSRRR*SSVRWV
Trigger: GACCCACCTGACGGAGCTGCAGCGCCTCCTGGACAC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
CDS-3UTR GCA 90 bp CAGCCATGGCTAGATCCGACTCCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTGTGTCCAGGAGGCGCTaGAGCTCCGTCAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: QPWLDPTPGSSTDSKAQAVSRRR*SSVSGS
Trigger: AGACCCACTGACGGAGCTGCAGCGCCTCCTGGACAC...AGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGGAGTCGGATCTAGCCATGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631326.2
CDS-3UTR CCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGACTGGGAAGCCGTCAATaGCCTCAACTTAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRLGSRQ*PQLSST
Trigger: TGTGCTGCTAAGTTGAGGCCATTGACGGCTTCCCAG...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCGTAGGCAGTGCCCGGTaGGGCTCCGGCATTCGTGTT +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVVGSAR*GSGIRV
Trigger: AACACGAATGCCGGAGCCCCACCGGGCACTGCCTAC...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CAGCCATGGCTAGATCCGACTCCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTACCAGGGACTGTGCATaGGCCACAGCAGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: QPWLDPTPGSSTDSKAQATRDCA*ATAARE
Trigger: CTCCCTGGCTGCTGTGGCCCATGCACAGTCCCTGGT...AGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGGAGTCGGATCTAGCCATGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGACTGCACTGCCAGGTaGTCCTCCACGAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGADCTAR*SSTSLS
Trigger: GGACAAGCTCGTGGAGGACCACCTGGCAGTGCAGTC...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGTGGTGGTGGGCAAGTaGAAGACCTTGTCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAVVVGK*KTLSRS
Trigger: TGACCTCGACAAGGTCTTCCACTTGCCCACCACCAC...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp AGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGGTGGTGGTGGGCAAGTaGAAGACCTTGTCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: RVNRTKTEQPVPRWWLPEVVVGK*KTLSRS
Trigger: TGACCTCGACAAGGTCTTCCACTTGCCCACCACCAC...CTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCATCAGCGGCCTCAAGGTaGGAAGGGTTGGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGASAASR*EGLATK
Trigger: CTTGGTGGCCAACCCTTCCCACCTTGAGGCCGCTGA...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCTCGTACACAATGCCCTaGCCAGCAAATGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESSYTMP*PANAAS
Trigger: GGATGCTGCATTTGCTGGCCAGGGCATTGTGTACGA...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGATCGTACACAATGCCCTaGCCAGCAAATGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRSYTMP*PANAAS
Trigger: GGATGCTGCATTTGCTGGCCAGGGCATTGTGTACGA...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAAGTTCACGTGGAAAATaGGGGCATTCACCACTCGGG +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTSSRGK*GHSPLG
Trigger: CCCGAGTGGTGAATGCCCCCATTTTCCACGTGAACT...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAAGTTCACGTGGAAAATaGGGGCATTCACCACTCGGG +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRSSRGK*GHSPLG
Trigger: CCCGAGTGGTGAATGCCCCCATTTTCCACGTGAACT...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAACAACCACGTCCTTGTaGAAGGTGCTCCTCCACTCG +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRATTTSL*KVLLHS
Trigger: CGAGTGGAGGAGCACCTTCCACAAGGACGTGGTTGT...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCATCCTCATACTCAGGCTaGTTGACCACACCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRASSYSG*LTTPCD
Trigger: GTCGCAGGGTGTGGTCAACCAGCCTGAGTATGAGGA...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGCCTCCGTCAGACCCGTaGAGGGGCAGGACATGCTCC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEPPSDP*RGRTCS
Trigger: GGAGCATGTCCTGCCCCTCCACGGGTCTGACGGAGG...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGCCCCGCTCCACGTCCTaGCCGCTCAGCCGAATGTGG +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERPRSTS*PLSRMW
Trigger: CCACATTCGGCTGAGCGGCCAGGACGTGGAGCGGGG...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGCCCCGCTCCACGTCCTaGCCGCTCAGCCGAATGTGG +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVPRSTS*PLSRMW
Trigger: CCACATTCGGCTGAGCGGCCAGGACGTGGAGCGGGG...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCAGCACATGGTGGCGGTaGCTGAATGTGCCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVSTWWR*LNVPRS
Trigger: GGAGCGGGGCACATTCAGCCACCGCCACCATGTGCT...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGAGGTGGAGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCCTCTTGTCCACATTCTaGTCATGGAGCACATGGTGG +
Preference number: 4 (lower is better)
Translates to: GGGGLTGPRQSSQCPGGGLLSTF*SWSTWW
Trigger: CCACCATGTGCTCCATGACCAGAATGTGGACAAGAG...GCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCTCCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCGATCTGGCCTCGGGGTaGCGCAACAGGGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVDLASG*RNRDLG
Trigger: CCCCAAATCCCTGTTGCGCCACCCCGAGGCCAGATC...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAGAGGTCAAAGGGGAATaGCGACAGCTGCTCAATCCT +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTEVKGE*RQLLNP
Trigger: AGGATTGAGCAGCTGTCGCCATTCCCCTTTGACCTC...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAAGCAAGGGGCAGTCATaGGTGTGGAGAGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGASKGQS*VWRGQW
Trigger: CCACTGCCCTCTCCACACCCATGACTGCCCCTTGCT...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGCAGCGTGTGGCCTGTaGGGCAGCCAAGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEAACGL*GSQALE
Trigger: CTCCAGTGCTTGGCTGCCCCACAGGCCACACGCTGC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTATCCTAGTGGGTGAGACTGCCCCACACACAGCCTaGAACCCTCGAAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: VTAEASTQGPVPILVGETAPHTA*NPRRNS
Trigger: GCTGTTCCTTCGAGGGTTCCAGGCTGTGTGTGGGGC...AGTCTCACCCACTAGGATAGGAACTGGGCCTTGTGTGCTGGCTTCCGCTGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCCCCAGGAGGGGTGGGTaGGGCATGCTTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: PGSSTDSKAQAQDEAILVPRRGG*GMLGPH
Trigger: GTGGGGCCCAAGCATGCCCCACCCACCCCTCCTGGG...GACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTATCCTAGTCTGAGCGGGGCTTCCTaGCTACACACAGACTCTGTG +
Preference number: 4 (lower is better)
Translates to: ALLGDSGSQHTRPSSYPSLSGAS*LHTDSV
Trigger: CACAGAGTCTGTGTGTAGCCAGGAAGCCCCGCTCAG...ACTAGGATAGGAACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGCCAGTGCCCCGGTGGTaGCTACCTGAGCGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERPVPRW*LPERGF
Trigger: GAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGG...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTATCCTAGTCTGCAGCTCCGTCAGTaGGTCTTCTTGTTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: ALLGDSGSQHTRPSSYPSLQLRQ*VFLLPV
Trigger: CACCGGCAACAAGAAGACCCACTGACGGAGCTGCAG...ACTAGGATAGGAACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCACCGCAGAGGAAGTGCTaGTTCCTGTCCCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAPQRKC*FLSPDE
Trigger: TTCATCGGGGGACAGGAATCAGCACTTCCTCTGCGG...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCTCTCCAGCCGACGGATaGTCTCCCGCAGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVSPADG*SPAEEV
Trigger: CACTTCCTCTGCGGGAGATCATCCGTCGGCTGGAGA...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp AGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTAAGCTGCCTCCAGCTTTaGATCGAATTGACAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RQSSQCPGGGYLSGASWLSCLQL*IELTED
Trigger: ATCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGCT...TAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCAGCCGATCTGGTTGTTaGCGACCACGTGCACGGTGC +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVSRSGC*RPRARC
Trigger: GCACCGTGCACGTGGTCGTCAACAACCAGATCGGCT...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCACATACTCAGGCTGGTTaGCCACACCCTGCGACACCA +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAHTQAG*PHPATP
Trigger: TGGTGTCGCAGGGTGTGGTCAACCAGCCTGAGTATG...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCGCCGTACTCAGACAGTaGGCTGTTGCACACAGTATA +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESAVLRQ*AVAHSI
Trigger: TATACTGTGTGCAACAGCTCACTGTCTGAGTACGGC...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCCGTACTCAGACAGTaGGCTGTTGCACACAGTATA +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRAVLRQ*AVAHSI
Trigger: TATACTGTGTGCAACAGCTCACTGTCTGAGTACGGC...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAGCCGTACTCAGACAGTaGGCTGTTGCACACAGTATA +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTAVLRQ*AVAHSI
Trigger: TATACTGTGTGCAACAGCTCACTGTCTGAGTACGGC...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACACAGGAGTGGAGCAGTTaGCAACAACCCAATTGCAGT +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTQEWSS*QQPNCS
Trigger: ACTGCAATTGGGTTGTTGTCAACTGCTCCACTCCTG...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGACAGGAGTGGAGCAGTTaGCAACAACCCAATTGCAGT +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRQEWSS*QQPNCS
Trigger: ACTGCAATTGGGTTGTTGTCAACTGCTCCACTCCTG...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAACATTTTCTGGGTTCTaGGCTGCAGGGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTTFSGF*AAGPSS
Trigger: AGAAGATGGCCCTGCAGCTCAGAACCCAGAAAATGT...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCACATTTTCTGGGTTCTaGGCTGCAGGGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESTFSGF*AAGPSS
Trigger: AGAAGATGGCCCTGCAGCTCAGAACCCAGAAAATGT...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAACATTTTCTGGGTTCTaGGCTGCAGGGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRTFSGF*AAGPSS
Trigger: AGAAGATGGCCCTGCAGCTCAGAACCCAGAAAATGT...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCGCTGCTCAATCCTTGTaGTGGCCACCTGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVAAQSL*WPPAPP
Trigger: TGGTGGGGCAGGTGGCCATCACAAGGATTGAGCAGC...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGCGGGCTTGGCGCGGCTaGTGGTGGTCCGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVRAWRG*WWSEVL
Trigger: CAAGACTTCGGACCACCATCAGCCGCGCCAAGCCCG...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGGACTCTGGTAGGCAGTaGCCGGTGGGGCTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVDSGRQ*PVGLRH
Trigger: ATGCCGGAGCCCCACCGGGCACTGCCTACCAGAGTC...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGACTCTGGTAGGCAGTaGCCGGTGGGGCTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERDSGRQ*PVGLRH
Trigger: ATGCCGGAGCCCCACCGGGCACTGCCTACCAGAGTC...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCATTCTACCAGGGACTGTaGATGGGCCACAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAFYQGL*MGHSSQ
Trigger: CTGGCTGCTGTGGCCCATGCACAGTCCCTGGTAGAA...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp TCAAATACAGGAGCCTGTGCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGGTCCACGTTGGGCTGTaGTTCTACCAGGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: SNTGACALLGDSGSQHTRVHVGL*FYQGLC
Trigger: GCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGAC...CCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTGTATTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCCACGTTGGGCTGTaGTTCTACCAGGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAVHVGL*FYQGLC
Trigger: GCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGAC...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCACTTCCTGATGACATTTaGAAGCACGTTCAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRALPDDI*KHVQPP
Trigger: GGGCGGCTGAACGTGCTTGCAAATGTCATCAGGAAG...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp ACGGCTGGGGCCCACCCTAGAAACCTCTGCCAGCCATGGCTAGATCCGACTCCATCCTGCGGTGATACATaGCCAGGTGGTACTTCACAT +
Preference number: 4 (lower is better)
Translates to: TAGAHPRNLCQPWLDPTPSCGDT*PGGTSH
Trigger: ATGTGAAGTACCACCTGGGCATGTATCACCGCAGGA...TGGAGTCGGATCTAGCCATGGCTGGCAGAGGTTTCTAGGGTGGGCCCCAGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCTCCTGCGGTGATACATaGCCAGGTGGTACTTCACAT +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESSCGDT*PGGTSH
Trigger: ATGTGAAGTACCACCTGGGCATGTATCACCGCAGGA...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTTCGGCTTTGGTCTTaGCCATCACCACGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAVRLWS*PSPRGQ
Trigger: CTGACCCCGTGGTGATGGGCAAGACCAAAGCCGAAC...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGCGTCCTTGTGGAAGGTaGTCCTCCACTCGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVERPCGR*SSTRPP
Trigger: TGGCGGCCGAGTGGAGGAGCACCTTCCACAAGGACG...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGTGGAGGGGCAGGACATaGTCCTGGGCTGCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERWRGRT*SWAARP
Trigger: TGGACGGGCAGCCCAGGAGCATGTCCTGCCCCTCCA...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCATCAGCCGAATGTGGATaGCCTCCTTCAGGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGASAECG*PPSGAS
Trigger: GCTCGCTCCTGAAGGAGGGCATCCACATTCGGCTGA...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGACATCTGGGTCATCGTTaGACATCTGCAAGAACCGCT +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRHLGHR*TSARTA
Trigger: AGCGGTTCTTGCAGATGTGCAACGATGACCCAGATG...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGTGTCCAGGAGGCGCTaGAGCTCCGTCAGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERVSRRR*SSVRWV
Trigger: GACCCACCTGACGGAGCTGCAGCGCCTCCTGGACAC...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
CDS-3UTR GCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGGTGTCCAGGAGGCGCTaGAGCTCCGTCAGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVVSRRR*SSVRWV
Trigger: GACCCACCTGACGGAGCTGCAGCGCCTCCTGGACAC...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
CDS-3UTR CCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAAAAACTGTTCGGCTTTaGTCTTGCCCATCACCACGG +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTKTVRL*SCPSPR
Trigger: CCGTGGTGATGGGCAAGACCAAAGCCGAACAGTTTT...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAAAAACTGTTCGGCTTTaGTCTTGCCCATCACCACGG +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRKTVRL*SCPSPR
Trigger: CCGTGGTGATGGGCAAGACCAAAGCCGAACAGTTTT...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCATGAGTTGTGTAGGATaGCAGGTCGCTGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESMSCVG*QVAEVE
Trigger: TTCCACCTCAGCGACCTGCCATCCTACACAACTCAT...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAATGAGTTGTGTAGGATaGCAGGTCGCTGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRMSCVG*QVAEVE
Trigger: TTCCACCTCAGCGACCTGCCATCCTACACAACTCAT...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp TGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTTCATCTGAGTTCACGTaGAAAATGGGGGCATTCACC +
Preference number: 4 (lower is better)
Translates to: CQVRPRLSPASCPGSSSVSSEFT*KMGAFT
Trigger: GGTGAATGCCCCCATTTTCCACGTGAACTCAGATGA...AACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGCCTCCGTCAGACCCGTaGAGGGGCAGGACATGCTCC +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERPPSDP*RGRTCS
Trigger: GGAGCATGTCCTGCCCCTCCACGGGTCTGACGGAGG...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGCACATGGTGGCGGTaGCTGAATGTGCCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVESTWWR*LNVPRS
Trigger: GGAGCGGGGCACATTCAGCCACCGCCACCATGTGCT...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCATCATGGAGCACATGGTaGCGGTGGCTGAATGTGCCC +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGASWSTW*RWLNVP
Trigger: GGGCACATTCAGCCACCGCCACCATGTGCTCCATGA...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp TTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGCTCTTGTCCACATTCTaGTCATGGAGCACATGGTGG +
Preference number: 4 (lower is better)
Translates to: LTGPRQSSQCPGGGYLSGLLSTF*SWSTWW
Trigger: CCACCATGTGCTCCATGACCAGAATGTGGACAAGAG...CCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGACTCTTGTCCACATTCTaGTCATGGAGCACATGGTGG +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRLLSTF*SWSTWW
Trigger: CCACCATGTGCTCCATGACCAGAATGTGGACAAGAG...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCCTCTTGTCCACATTCTaGTCATGGAGCACATGGTGG +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESLLSTF*SWSTWW
Trigger: CCACCATGTGCTCCATGACCAGAATGTGGACAAGAG...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCACCCGGGCAGATGAACTaGTCGATGATACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAPGQMN*SMIHWA
Trigger: GGCCCAGTGTATCATCGACCAGTTCATCTGCCCGGG...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCGGCGGAGGAATGTTCTaGACCCATGCCCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVGGGMF*THALHA
Trigger: GGCATGGAGGGCATGGGTCCAGAACATTCCTCCGCC...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCCTGCAAGAACCGCTCTaGGCGGGCGGAGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVLQEPL*AGGGMF
Trigger: GAACATTCCTCCGCCCGCCCAGAGCGGTTCTTGCAG...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCGGCTTCTTTAAGGTCTaGCAGGACATCTGGGTCATC +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESGFFKV*QDIWVI
Trigger: GATGACCCAGATGTCCTGCCAGACCTTAAAGAAGCC...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAGGCTTCTTTAAGGTCTaGCAGGACATCTGGGTCATC +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTGFFKV*QDIWVI
Trigger: GATGACCCAGATGTCCTGCCAGACCTTAAAGAAGCC...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGATCTGGCCTCGGGGTaGCGCAACAGGGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEDLASG*RNRDLG
Trigger: CCCCAAATCCCTGTTGCGCCACCCCGAGGCCAGATC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCACATCAAAGCTGGATCTaGCCTCGGGGTGGCGCAACA +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAHQSWI*PRGGAT
Trigger: TGTTGCGCCACCCCGAGGCCAGATCCAGCTTTGATG...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTATCCTAGTGGGTGAGACTGCATCTCATCAAAGCTaGATCTGGCCTCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VTAEASTQGPVPILVGETASHQS*IWPRGG
Trigger: GCCACCCCGAGGCCAGATCCAGCTTTGATGAGATGC...AGTCTCACCCACTAGGATAGGAACTGGGCCTTGTGTGCTGGCTTCCGCTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAATCACCCGCTGGAAGTaGGTTCCTGGAAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAITRWK*VPGSIS
Trigger: TGAGATGCTTCCAGGAACCCACTTCCAGCGGGTGAT...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCATCTGGGATCACCCGCTaGAAGTGGGTTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGASGITR*KWVPGS
Trigger: GCTTCCAGGAACCCACTTCCAGCGGGTGATCCCAGA...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCATGCAGGGCCATCTTCTaGGATCACCCGCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGACRAIF*DHPLEV
Trigger: CACTTCCAGCGGGTGATCCCAGAAGATGGCCCTGCA...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGAGGGCGGTGGTGTaGGCAGCGCTGAGGCACTAT +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVERRAVV*AALRHY
Trigger: ATAGTGCCTCAGCGCTGCCCACACCACCGCCCTCCT...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGAGCCTGTGCCTTGCTaGGTGACAGCGGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEEPVPC*VTAEAS
Trigger: GCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR CAA 72 bp GCCCAAGCAACCCTAGGCAGCATCTACGAGAAGTTCTaGAAGACGTCCAGGTCGAAGGCCGTGTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AQATLGSIYEKF*KTSRSKAVSRR
Trigger: CCTCCTGGACACGGCCTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGATGCTGCCTAGGGTTGCTTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631326.2
CDS-3UTR TCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAAAGTTTGTCTGTGGATaGGATAATGTCAGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTKFVCG*DNVSGH
Trigger: GTGCCCGCTGACATTATCTCATCCACAGACAAACTT...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCCCGCAGAGGAAGTGCTaGTTCCTGTCCCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVPQRKC*FLSPDE
Trigger: TTCATCGGGGGACAGGAATCAGCACTTCCTCTGCGG...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCATGTGTGGCATGCCCATaGTCACGTAGTCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGACVACP*SRSPRH
Trigger: ATGGCGTGGACTACGTGATCATGGGCATGCCACACA...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAAGCCTCGGGGTCATCTaGGTTCACGTGGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGASLGVI*VHVENG
Trigger: CCCATTTTCCACGTGAACTCAGATGACCCCGAGGCT...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CCTGTGCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTATCGCCGTACTCAGACAGTaGGCTGTTGCACACAGTATA +
Preference number: 4 (lower is better)
Translates to: PVPCWVTAEASTQGPVPIAVLRQ*AVAHSI
Trigger: TATACTGTGTGCAACAGCTCACTGTCTGAGTACGGC...GATAGGAACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAACATTTTCTGGGTTCTaGGCTGCAGGGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRATFSGF*AAGPSS
Trigger: AGAAGATGGCCCTGCAGCTCAGAACCCAGAAAATGT...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCAGAAGAGAAGCCTTTTaGCATTTTCTGGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GQAKALSCQLPRVILSSRRREAF*HFLGSE
Trigger: CTCAGAACCCAGAAAATGTCAAAAGGCTTCTCTTCT...GCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCATCTACGAGAAGTTCTTaGAGACGTCCAGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRASTRSS*RRPGRR
Trigger: CCTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGA...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTATCCTAGTGGGTGAGACTCTCCTCTCCCTCTTCTaGCCTGCTTTGGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: VTAEASTQGPVPILVGETLLSLF*PALAQQ
Trigger: TTGCTGTGCCAAAGCAGGTCAGAAGAGGGAGAGGAG...AGTCTCACCCACTAGGATAGGAACTGGGCCTTGTGTGCTGGCTTCCGCTGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCTTCTACCAGGGACTGTaGATGGGCCACAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVFYQGL*MGHSSQ
Trigger: CTGGCTGCTGTGGCCCATGCACAGTCCCTGGTAGAA...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCGTCCACGTTGGGCTGTaGTTCTACCAGGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVVHVGL*FYQGLC
Trigger: GCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGAC...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp ACAGGAGCCTGTGCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTCATTTGTGAACTaGATGATCCCAGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: TGACALLGDSGSQHTRPSSSFVN*MIPGVS
Trigger: TGAGACCCCTGGGATCATGCAGTTCACAAATGAGGA...ACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACATCCTCATTTGTGAACTaGATGATCCCAGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTSSFVN*MIPGVS
Trigger: TGAGACCCCTGGGATCATGCAGTTCACAAATGAGGA...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGCGTCCTTGTGGAAGGTaGTCCTCCACTCGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVRPCGR*SSTRPP
Trigger: TGGCGGCCGAGTGGAGGAGCACCTTCCACAAGGACG...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACATGTAACACAGGCTTCTaGTTGCGGATCTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTCNTGF*LRICLY
Trigger: GTACAAGCAGATCCGCAAGCAGAAGCCTGTGTTACA...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp TCATCCTCAGTTCACGCCACGGCTGGGGCCCACCCTAGAAACCTCTGCCAGCCAGGAGAGTCCAGCCAGTaGTTAATGTGCAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: SSSVHATAGAHPRNLCQPGESSQ*LMCKIF
Trigger: GAAGATCTTGCACATTAAGCACTGGCTGGACTCTCC...TGGCTGGCAGAGGTTTCTAGGGTGGGCCCCAGCCGTGGCGTGAACTGAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGGAGAGTCCAGCCAGTaGTTAATGTGCAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRGESSQ*LMCKIF
Trigger: GAAGATCTTGCACATTAAGCACTGGCTGGACTCTCC...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCGGAGAGTCCAGCCAGTaGTTAATGTGCAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESGESSQ*LMCKIF
Trigger: GAAGATCTTGCACATTAAGCACTGGCTGGACTCTCC...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGATGGTTCATGGGGATaGAGGTTCTCTTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRDGSWG*RFSCPH
Trigger: ATGTGGACAAGAGAACCTGCATCCCCATGAACCATC...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GAGACTGAAGCTGCCCTTTCTGTGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCATCTGGGTCATCGTTaGACATCTGCAAGAACCGCT +
Preference number: 4 (lower is better)
Translates to: ETEAALSVPGQAKALSCQHLGHR*TSARTA
Trigger: AGCGGTTCTTGCAGATGTGCAACGATGACCCAGATG...CTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACAGAAAGGGCAGCTTCAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp TCATCCTCAGTTCACGCCACGGCTGGGGCCCACCCTAGAAACCTCTGCCAGCCAGGTCATAATACACTTTaGCGGTGCAGAAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SSSVHATAGAHPRNLCQPGHNTL*RCRREA
Trigger: GGCTTCTCTTCTGCACCGGCAAAGTGTATTATGACC...TGGCTGGCAGAGGTTTCTAGGGTGGGCCCCAGCCGTGGCGTGAACTGAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGGTCATAATACACTTTaGCGGTGCAGAAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRGHNTL*RCRREA
Trigger: GGCTTCTCTTCTGCACCGGCAAAGTGTATTATGACC...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGCTTGTGATGGCCACCTaGCCCACCATGTCGCGTGCT +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVELVMAT*PTMSRA
Trigger: AGCACGCGACATGGTGGGGCAGGTGGCCATCACAAG...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTATCCTAGTGGGTGAGACTGGGAATGGCGACAGCTaGTCAATCCTTGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: VTAEASTQGPVPILVGETGNGDS*SILVMA
Trigger: GGCCATCACAAGGATTGAGCAGCTGTCGCCATTCCC...AGTCTCACCCACTAGGATAGGAACTGGGCCTTGTGTGCTGGCTTCCGCTGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGGGTGGGTCTTCTTGTTaGCGGTGGCTGGAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVGGSSC*RWLEQP
Trigger: CGGCTGCTCCAGCCACCGGCAACAAGAAGACCCACC...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
CDS-3UTR GCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGGCCTCCTGGAAAACTaGTCAGAAGTCAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAGLLEN*SEVSRA
Trigger: GGCTCTGCTGACTTCTGAGCAGTTTTCCAGGAGGCC...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GGAGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGCTCCCTCTTCTGACCTaGTTTGGCACAGCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: GGLTGPRQSSQCPGGGYLLPLLT*FGTAKK
Trigger: TTTCTTTGCTGTGCCAAAGCAGGTCAGAAGAGGGAG...CAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAACCCCTGACCTGATATaGCCTGATGAGCGACTGCAC +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGATPDLI*PDERLH
Trigger: GTGCAGTCGCTCATCAGGGCATATCAGGTCAGGGGT...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447398.5
ENST00000449767.5
CDS-3UTR GCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAGAGAGGATCAAGTTTTaGAATGTGGTGACCCCTGAC +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTERIKF*NVVTPD
Trigger: GTCAGGGGTCACCACATTGCAAAACTTGATCCTCTC...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000447398.5
ENST00000449767.5
CDS-3UTR CCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAAATGTCTTAACAGTCTaGGAAGCCGTCAATGGCCTC +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTNVLTV*EAVNGL
Trigger: GAGGCCATTGACGGCTTCCCAGACTGTTAAGACATT...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp ACAGGAGCCTGTGCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTAATGTCTTAACAGTCTaGGAAGCCGTCAATGGCCTC +
Preference number: 4 (lower is better)
Translates to: TGACALLGDSGSQHTRPSNVLTV*EAVNGL
Trigger: GAGGCCATTGACGGCTTCCCAGACTGTTAAGACATT...ACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGACCAGGGACTGTGCATaGGCCACAGCAGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVTRDCA*ATAARE
Trigger: CTCCCTGGCTGCTGTGGCCCATGCACAGTCCCTGGT...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTGGTGGTGGGCAAGTaGAAGACCTTGTCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAVVVGK*KTLSRS
Trigger: TGACCTCGACAAGGTCTTCCACTTGCCCACCACCAC...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCACTCCTCAAACCTGGTaGACCGCACAAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVTPQTW*TAQAWP
Trigger: TGGCCAGGCTTGTGCGGTCCACCAGGTTTGAGGAGT...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp AGCATCTACGAGAAGTTCTTGAAGACGTCCAGGTCGAAGGCCGTGTCCAGGAGGGGAACTCCTCAAACCTaGTGGACCGCACAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SIYEKFLKTSRSKAVSRRGTPQT*WTAQAW
Trigger: CCAGGCTTGTGCGGTCCACCAGGTTTGAGGAGTTCC...CCTCCTGGACACGGCCTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631326.2
CDS-3UTR CCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCCAGCCGCCCTCTGTGTaGCATGCCCATGATCACGTA +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVQPPSV*HAHDHV
Trigger: TACGTGATCATGGGCATGCCACACAGAGGGCGGCTG...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGTCAGCGGCCTCAAGGTaGGAAGGGTTGGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVESAASR*EGLATK
Trigger: CTTGGTGGCCAACCCTTCCCACCTTGAGGCCGCTGA...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCTCATCTGAGTTCACGTaGAAAATGGGGGCATTCACC +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESSSEFT*KMGAFT
Trigger: GGTGAATGCCCCCATTTTCCACGTGAACTCAGATGA...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAACAACCACGTCCTTGTaGAAGGTGCTCCTCCACTCG +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGATTTSL*KVLLHS
Trigger: CGAGTGGAGGAGCACCTTCCACAAGGACGTGGTTGT...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGCCGCTCAGCCGAATGTaGATGCCCTCCTTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEPLSRM*MPSFRS
Trigger: GCTCCTGAAGGAGGGCATCCACATTCGGCTGAGCGG...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGAGCACATGGTGGCGGTaGCTGAATGTGCCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVSTWWR*LNVPRS
Trigger: GGAGCGGGGCACATTCAGCCACCGCCACCATGTGCT...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCTCATGGAGCACATGGTaGCGGTGGCTGAATGTGCCC +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVSWSTW*RWLNVP
Trigger: GGGCACATTCAGCCACCGCCACCATGTGCTCCATGA...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCCCCGGGCAGATGAACTaGTCGATGATACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVPGQMN*SMIHWA
Trigger: GGCCCAGTGTATCATCGACCAGTTCATCTGCCCGGG...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGGCGGAGGAATGTTCTaGACCCATGCCCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEGGGMF*THALHA
Trigger: GGCATGGAGGGCATGGGTCCAGAACATTCCTCCGCC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGGCTTCTTTAAGGTCTaGCAGGACATCTGGGTCATC +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAGFFKV*QDIWVI
Trigger: GATGACCCAGATGTCCTGCCAGACCTTAAAGAAGCC...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGGATCTGGCCTCGGGGTaGCGCAACAGGGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVDLASG*RNRDLG
Trigger: CCCCAAATCCCTGTTGCGCCACCCCGAGGCCAGATC...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCGCATCTCATCAAAGCTaGATCTGGCCTCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVASHQS*IWPRGG
Trigger: GCCACCCCGAGGCCAGATCCAGCTTTGATGAGATGC...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCCTGGAAGTGGGTTCCTaGAAGCATCTCATCAAAGCT +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESLEVGS*KHLIKA
Trigger: AGCTTTGATGAGATGCTTCCAGGAACCCACTTCCAG...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGACTGGAAGTGGGTTCCTaGAAGCATCTCATCAAAGCT +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRLEVGS*KHLIKA
Trigger: AGCTTTGATGAGATGCTTCCAGGAACCCACTTCCAG...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACACTGGAAGTGGGTTCCTaGAAGCATCTCATCAAAGCT +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTLEVGS*KHLIKA
Trigger: AGCTTTGATGAGATGCTTCCAGGAACCCACTTCCAG...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCTCTGGGATCACCCGCTaGAAGTGGGTTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVSGITR*KWVPGS
Trigger: GCTTCCAGGAACCCACTTCCAGCGGGTGATCCCAGA...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCGGTGGTCCGAAGTCTTaGCTTCACGTAGTCATAGTA +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESGGPKS*LHVVIV
Trigger: TACTATGACTACGTGAAGCCAAGACTTCGGACCACC...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGGTGGTCCGAAGTCTTaGCTTCACGTAGTCATAGTA +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRGGPKS*LHVVIV
Trigger: TACTATGACTACGTGAAGCCAAGACTTCGGACCACC...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCTGCAGCTCCGTCAGGTaGGTCTTCTTGTTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVCSSVR*VFLLPV
Trigger: CACCGGCAACAAGAAGACCCACCTGACGGAGCTGCA...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
CDS-3UTR CCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGAGGAGGGCGGTGGTGTaGGCAGCGCTGAGGCACTAT +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERRRAVV*AALRHY
Trigger: ATAGTGCCTCAGCGCTGCCCACACCACCGCCCTCCT...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CAGCATCTACGAGAAGTTCTTGAAGACGTCCAGGTCGAAGGCCGTGTCCAGGAGTACACACAGACTCTGTaGGCTCCAGGTGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: QHLREVLEDVQVEGRVQEYTQTL*APGAAW
Trigger: CCAGGCAGCACCTGGAGCCCACAGAGTCTGTGTGTA...CTCCTGGACACGGCCTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGATGCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631326.2
CDS-3UTR CCA 90 bp GCCCCGGGTCATCCTCAGTTCACGCCACGGCTGGGGCCCACCCTAGAAACCTCTTCTTCTGACCTGCTTTaGCACAGCAAAGAAAACGAT +
Preference number: 4 (lower is better)
Translates to: APGHPQFTPRLGPTLETSSSDLL*HSKEND
Trigger: ATCGTTTTCTTTGCTGTGCCAAAGCAGGTCAGAAGA...AGAGGTTTCTAGGGTGGGCCCCAGCCGTGGCGTGAACTGAGGATGACCCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
3UTR CAA 72 bp GAAGCTATCCTAGTCTCAAATACAGGAGCCTGTGCCTaGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCC +
Preference number: 4 (lower is better)
Translates to: EAILVSNTGACA*LGDSGSQHTRP
Trigger: GGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTGTATTTGAGACTAGGATAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGTCTCCAGCCGACGGATaGTCTCCCGCAGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVSPADG*SPAEEV
Trigger: CACTTCCTCTGCGGGAGATCATCCGTCGGCTGGAGA...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGTCTCCAGCCGACGGATaGTCTCCCGCAGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERSPADG*SPAEEV
Trigger: CACTTCCTCTGCGGGAGATCATCCGTCGGCTGGAGA...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGCTGCCTCCAGCTTTaGATCGAATTGACAGAAGAT +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESSCLQL*IELTED
Trigger: ATCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGCT...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAAGCTGCCTCCAGCTTTaGATCGAATTGACAGAAGAT +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRSCLQL*IELTED
Trigger: ATCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGCT...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GATCCGACTCCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTAGCCGATCTGGTTGTTaGCGACCACGTGCACGGTGC +
Preference number: 4 (lower is better)
Translates to: DPTPGSSTDSKAQAQDEASRSGC*RPRARC
Trigger: GCACCGTGCACGTGGTCGTCAACAACCAGATCGGCT...AGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGGAGTCGGATC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCACGGCTCAGCCCTCCATaGATAGTAAAGTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRARLSPP*IVKFST
Trigger: TGTGGAAAACTTTACTATTCATGGAGGGCTGAGCCG...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp ACACTGCAGAGACTGAAGCTGCCCTTTCTGTGCCAGGTCAGGCCAAGGCTCTCTCTTTGCGCTCCCGGGTaGGGTCATAATACACTTTGC +
Preference number: 4 (lower is better)
Translates to: TLQRLKLPFLCQVRPRLSLCAPG*GHNTLC
Trigger: GCAAAGTGTATTATGACCTCACCCGGGAGCGCAAAG...AGAGAGCCTTGGCCTGACCTGGCACAGAAAGGGCAGCTTCAGTCTCTGCAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCACTTTGCGCTCCCGGGTaGGGTCATAATACACTTTGC +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGALCAPG*GHNTLC
Trigger: GCAAAGTGTATTATGACCTCACCCGGGAGCGCAAAG...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGGCTGCTCAATCCTTGTaGTGGCCACCTGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVAAQSL*WPPAPP
Trigger: TGGTGGGGCAGGTGGCCATCACAAGGATTGAGCAGC...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAGCACTATTCTTTAGTTaGGAAGCAAGGGGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTALFFS*EARGSH
Trigger: ATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGC...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCTGCAAGATCCACGTTTaGAGAAACAGTTACTGGAGC +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESCKIHV*RNSYWS
Trigger: GCTCCAGTAACTGTTTCTTCAAACGTGGATCTTGCA...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447398.5
CDS-3UTR GCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGTTCTACCAGGGACTGTaGATGGGCCACAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEFYQGL*MGHSSQ
Trigger: CTGGCTGCTGTGGCCCATGCACAGTCCCTGGTAGAA...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGTCCACGTTGGGCTGTaGTTCTACCAGGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEVHVGL*FYQGLC
Trigger: GCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGAC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCATCCTCATTTGTGAACTaGATGATCCCAGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRASSFVN*MIPGVS
Trigger: TGAGACCCCTGGGATCATGCAGTTCACAAATGAGGA...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCACTTCCTGATGACATTTaGAAGCACGTTCAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGALPDDI*KHVQPP
Trigger: GGGCGGCTGAACGTGCTTGCAAATGTCATCAGGAAG...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGCCCTGGCCAGCAAATaGAGCATCCCCATGCAACAG +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEALASK*SIPMQQ
Trigger: CTGTTGCATGGGGATGCTGCATTTGCTGGCCAGGGC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTATCCTAGTGGGTGAGACTTCTCGTTGTGGCCGTTaGGCCGGTAACACACCAAAT +
Preference number: 4 (lower is better)
Translates to: VTAEASTQGPVPILVGETSRCGR*AGNTPN
Trigger: ATTTGGTGTGTTACCGGCGCAACGGCCACAACGAGA...AGTCTCACCCACTAGGATAGGAACTGGGCCTTGTGTGCTGGCTTCCGCTGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCATGTAACACAGGCTTCTaGTTGCGGATCTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRACNTGF*LRICLY
Trigger: GTACAAGCAGATCCGCAAGCAGAAGCCTGTGTTACA...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGTGGTTGACCACACCCTaGGACACCAGCAGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERWLTTP*DTSSSA
Trigger: CGCTGAGCTGCTGGTGTCGCAGGGTGTGGTCAACCA...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GAGACTGAAGCTGCCCTTTCTGTGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGGGAGAGTCCAGCCAGTaGTTAATGTGCAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: ETEAALSVPGQAKALSCQGESSQ*LMCKIF
Trigger: GAAGATCTTGCACATTAAGCACTGGCTGGACTCTCC...CTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACAGAAAGGGCAGCTTCAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGTCAGCCGAATGTGGATaGCCTCCTTCAGGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVESAECG*PPSGAS
Trigger: GCTCGCTCCTGAAGGAGGGCATCCACATTCGGCTGA...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCACAGACAGTGAGCTGTTaGACACAGTATAGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAQTVSC*TQYRGP
Trigger: AGGCCCCCTATACTGTGTGCAACAGCTCACTGTCTG...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCTCATCGTTGCACATCTaGAAGAACCGCTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVSSLHI*KNRSGR
Trigger: CCGCCCAGAGCGGTTCTTGCAGATGTGCAACGATGA...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp AGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGGGTCATAATACACTTTaGCGGTGCAGAAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: RVNRTKTEQPVPRWWLPEGHNTL*RCRREA
Trigger: GGCTTCTCTTCTGCACCGGCAAAGTGTATTATGACC...CTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGCTTGTGATGGCCACCTaGCCCACCATGTCGCGTGCT +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERLVMAT*PTMSRA
Trigger: AGCACGCGACATGGTGGGGCAGGTGGCCATCACAAG...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCGGGAATGGCGACAGCTaGTCAATCCTTGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVGNGDS*SILVMA
Trigger: GGCCATCACAAGGATTGAGCAGCTGTCGCCATTCCC...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCCCCGGGTCATCCTCAGTTCACGCCACGGCTGGGGCCCACCCTAGAAACCTCTTATGGGTCAAGCCAATaGAATGCAAAGTTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: APGHPQFTPRLGPTLETSYGSSQ*NAKLFL
Trigger: CAGAAACAACTTTGCATTGCATTGGCTTGACCCATA...AGAGGTTTCTAGGGTGGGCCCCAGCCGTGGCGTGAACTGAGGATGACCCGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222673.6
CDS-3UTR CCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCACTGGGAAGCCGTCAATaGCCTCAACTTAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGALGSRQ*PQLSST
Trigger: TGTGCTGCTAAGTTGAGGCCATTGACGGCTTCCCAG...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAAATGTCTTAACAGTCTaGGAAGCCGTCAATGGCCTC +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRANVLTV*EAVNGL
Trigger: GAGGCCATTGACGGCTTCCCAGACTGTTAAGACATT...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGGACTGCACTGCCAGGTaGTCCTCCACGAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVDCTAR*SSTSLS
Trigger: GGACAAGCTCGTGGAGGACCACCTGGCAGTGCAGTC...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGACTGCACTGCCAGGTaGTCCTCCACGAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERDCTAR*SSTSLS
Trigger: GGACAAGCTCGTGGAGGACCACCTGGCAGTGCAGTC...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCGTGGTGGTGGGCAAGTaGAAGACCTTGTCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVVVVGK*KTLSRS
Trigger: TGACCTCGACAAGGTCTTCCACTTGCCCACCACCAC...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGGAACTCCTCAAACCTaGTGGACCGCACAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEGTPQT*WTAQAW
Trigger: CCAGGCTTGTGCGGTCCACCAGGTTTGAGGAGTTCC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGCAGCCGCCCTCTGTGTaGCATGCCCATGATCACGTA +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEQPPSV*HAHDHV
Trigger: TACGTGATCATGGGCATGCCACACAGAGGGCGGCTG...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCGTGGTGAAGCCGATCTaGTTGTTGACGACCACGTGC +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVVVKPI*LLTTTC
Trigger: GCACGTGGTCGTCAACAACCAGATCGGCTTCACCAC...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAAGTTCACGTGGAAAATaGGGGCATTCACCACTCGGG +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGASSRGK*GHSPLG
Trigger: CCCGAGTGGTGAATGCCCCCATTTTCCACGTGAACT...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCATCATCTGAGTTCACGTaGAAAATGGGGGCATTCACC +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRASSEFT*KMGAFT
Trigger: GGTGAATGCCCCCATTTTCCACGTGAACTCAGATGA...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGCCGCTCAGCCGAATGTaGATGCCCTCCTTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVPLSRM*MPSFRS
Trigger: GCTCCTGAAGGAGGGCATCCACATTCGGCTGAGCGG...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCTCCACATTCTGGTCATaGAGCACATGGTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVSTFWS*STWWRW
Trigger: CCACCGCCACCATGTGCTCCATGACCAGAATGTGGA...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGGGCGGAGGAATGTTCTaGACCCATGCCCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVGGGMF*THALHA
Trigger: GGCATGGAGGGCATGGGTCCAGAACATTCCTCCGCC...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CAGCCATGGCTAGATCCGACTCCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTTGGCGTCGTAGCACGTaGAAGAAGTTGCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: QPWLDPTPGSSTDSKAQAWRRST*KKLPGV
Trigger: CACTCCTGGCAACTTCTTCCACGTGCTACGACGCCA...AGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGGAGTCGGATCTAGCCATGGCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGCATCTCATCAAAGCTaGATCTGGCCTCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEASHQS*IWPRGG
Trigger: GCCACCCCGAGGCCAGATCCAGCTTTGATGAGATGC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCACTGGAAGTGGGTTCCTaGAAGCATCTCATCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRALEVGS*KHLIKA
Trigger: AGCTTTGATGAGATGCTTCCAGGAACCCACTTCCAG...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGTGCAGGGCCATCTTCTaGGATCACCCGCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVECRAIF*DHPLEV
Trigger: CACTTCCAGCGGGTGATCCCAGAAGATGGCCCTGCA...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGAGGTCAAAGGGGAATaGCGACAGCTGCTCAATCCT +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAEVKGE*RQLLNP
Trigger: AGGATTGAGCAGCTGTCGCCATTCCCCTTTGACCTC...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CAGCCATGGCTAGATCCGACTCCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTAGGCCAGCTCAGCATTaGGGTACTTCTGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: QPWLDPTPGSSTDSKAQARPAQH*GTSAPP
Trigger: AGGAGGTGCAGAAGTACCCCAATGCTGAGCTGGCCT...AGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGGAGTCGGATCTAGCCATGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGAGCAAGGGGCAGTCATaGGTGTGGAGAGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVSKGQS*VWRGQW
Trigger: CCACTGCCCTCTCCACACCCATGACTGCCCCTTGCT...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGAGCAAGGGGCAGTCATaGGTGTGGAGAGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERSKGQS*VWRGQW
Trigger: CCACTGCCCTCTCCACACCCATGACTGCCCCTTGCT...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGACCTTATGTACACTTTTaGGGTTTTCCAGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRPYVHF*GFPAKH
Trigger: GTGCTTGGCTGGAAAACCCCAAAAGTGTACATAAGG...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000439616.6
CDS-3UTR TCA 90 bp CAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCCACGCACAAGTCCTTAAATaGAACATTTTTGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: QAKALSCQLPRVILSSRHAQVLK*NIFVLK
Trigger: CTTCAGGACAAAAATGTTTCATTTAAGGACTTGTGC...GTGGCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GGAGGTGGAGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTGCTGGTCTGTTTTGTaGAAATGTCTTAACAGTCTG +
Preference number: 4 (lower is better)
Translates to: GGGGLTGPRQSSQCPGGGCWSVL*KCLNSL
Trigger: CAGACTGTTAAGACATTTTCACAAAACAGACCAGCA...GCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCTCCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGCCGCAGAGGAAGTGCTaGTTCCTGTCCCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVPQRKC*FLSPDE
Trigger: TTCATCGGGGGACAGGAATCAGCACTTCCTCTGCGG...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGTGTGTGGCATGCCCATaGTCACGTAGTCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVECVACP*SRSPRH
Trigger: ATGGCGTGGACTACGTGATCATGGGCATGCCACACA...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAAGCTTTGAATCGAATTaGCAGAAGATCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRSFESN*QKICSS
Trigger: GCTGGAACAGATCTTCTGTCAATTCGATTCAAAGCT...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GGAGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCTTTGAATCGAATTaGCAGAAGATCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GGLTGPRQSSQCPGGGYLSFESN*QKICSS
Trigger: GCTGGAACAGATCTTCTGTCAATTCGATTCAAAGCT...CAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAAGCTGCCTCCAGCTTTaGATCGAATTGACAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRASCLQL*IELTED
Trigger: ATCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGCT...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGCCTCGGGGTCATCTaGGTTCACGTGGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVESLGVI*VHVENG
Trigger: CCCATTTTCCACGTGAACTCAGATGACCCCGAGGCT...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGCTTTGCACACGTACATaGCAGCCTCGGGGTCATCTG +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVELCTRT*QPRGHL
Trigger: CAGATGACCCCGAGGCTGTCATGTACGTGTGCAAAG...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGTTGCAGTCATATAGCTaGTTGATGTCGAAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: VNRTKTEQPVPRWWLPERLQSYS*LMSKLA
Trigger: AGCCAACTTCGACATCAATCAGCTATATGACTGCAA...CCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACATTGCAGTCATATAGCTaGTTGATGTCGAAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTLQSYS*LMSKLA
Trigger: AGCCAACTTCGACATCAATCAGCTATATGACTGCAA...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp ACAGGAGCCTGTGCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTTTGCAGTCATATAGCTaGTTGATGTCGAAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: TGACALLGDSGSQHTRPSLQSYS*LMSKLA
Trigger: AGCCAACTTCGACATCAATCAGCTATATGACTGCAA...ACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAACATTTTCTGGGTTCTaGGCTGCAGGGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGATFSGF*AAGPSS
Trigger: AGAAGATGGCCCTGCAGCTCAGAACCCAGAAAATGT...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAAGAGAAGCCTTTTaGCATTTTCTGGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESRREAF*HFLGSE
Trigger: CTCAGAACCCAGAAAATGTCAAAAGGCTTCTCTTCT...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCACTCAGCAGCAACAGGTaGAGAATAGCACCGAATCTG +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGALSSNR*RIAPNL
Trigger: CAGATTCGGTGCTATTCTGCACCTGTTGCTGCTGAG...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCCCCTCGTATCTGATATaGCCTGATGAGCGACTGCAC +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVPSYLI*PDERLH
Trigger: GTGCAGTCGCTCATCAGGGCATATCAGATACGAGGG...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCATCCTGCGGTGATACATaGCCAGGTGGTACTTCACAT +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGASCGDT*PGGTSH
Trigger: ATGTGAAGTACCACCTGGGCATGTATCACCGCAGGA...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp TCAAATACAGGAGCCTGTGCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGTCCTGCGGTGATACATaGCCAGGTGGTACTTCACAT +
Preference number: 4 (lower is better)
Translates to: SNTGACALLGDSGSQHTRSCGDT*PGGTSH
Trigger: ATGTGAAGTACCACCTGGGCATGTATCACCGCAGGA...CCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTGTATTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGTTCGGCTTTGGTCTTaGCCATCACCACGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERVRLWS*PSPRGQ
Trigger: CTGACCCCGTGGTGATGGGCAAGACCAAAGCCGAAC...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGGCCCTGGCCAGCAAATaGAGCATCCCCATGCAACAG +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVALASK*SIPMQQ
Trigger: CTGTTGCATGGGGATGCTGCATTTGCTGGCCAGGGC...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GTGGCCCAAGCAACCCTAGGCAGCATCTACGAGAAGTTCTTGAAGACGTCCAGGAGGTCTCGTACACAATaGCCTGGCCAGCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: VAQATLGSIYEKFLKTSRRSRTQ*PGQQMQ
Trigger: CTGCATTTGCTGGCCAGGGCATTGTGTACGAGACCT...CCTGGACGTCTTCAAGAACTTCTCGTAGATGCTGCCTAGGGTTGCTTGGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631326.2
CDS-3UTR GCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCTCTCGTTGTGGCCGTTaGGCCGGTAACACACCAAAT +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVSRCGR*AGNTPN
Trigger: ATTTGGTGTGTTACCGGCGCAACGGCCACAACGAGA...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTATCCTAGTTGTAACACAGGCTTCTaGTTGCGGATCTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: ALLGDSGSQHTRPSSYPSCNTGF*LRICLY
Trigger: GTACAAGCAGATCCGCAAGCAGAAGCCTGTGTTACA...ACTAGGATAGGAACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp ACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTACAAGCCAGTGCTTAATGTaGAAGATCTTCTCATCTTTA +
Preference number: 4 (lower is better)
Translates to: TEQPVPRWWLPERGFLATSQCLM*KIFSSL
Trigger: TAAAGATGAGAAGATCTTGCACATTAAGCACTGGCT...TGTAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp AGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTAAGCCAGTGCTTAATGTaGAAGATCTTCTCATCTTTA +
Preference number: 4 (lower is better)
Translates to: RQSSQCPGGGYLSGASWLSQCLM*KIFSSL
Trigger: TAAAGATGAGAAGATCTTGCACATTAAGCACTGGCT...TAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGTCAGCCGAATGTGGATaGCCTCCTTCAGGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVSAECG*PPSGAS
Trigger: GCTCGCTCCTGAAGGAGGGCATCCACATTCGGCTGA...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp AGGGCAGTGGCCCAAGCAACCCTAGGCAGCATCTACGAGAAGTTCTTGAAGACGCAGACAGTGAGCTGTTaGACACAGTATAGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RAVAQATLGSIYEKFLKTQTVSC*TQYRGP
Trigger: AGGCCCCCTATACTGTGTGCAACAGCTCACTGTCTG...CGTCTTCAAGAACTTCTCGTAGATGCTGCCTAGGGTTGCTTGGGCCACTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCACATCTGGGTCATCGTTaGACATCTGCAAGAACCGCT +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAHLGHR*TSARTA
Trigger: AGCGGTTCTTGCAGATGTGCAACGATGACCCAGATG...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCTTCTGGGTTCTGAGCTaGAGGGCCATCTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVFWVLS*RAIFWD
Trigger: ATCCCAGAAGATGGCCCTGCAGCTCAGAACCCAGAA...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp AGAAACCTCTGCCAGCCATGGCTAGATCCGACTCCAGGCTCCTCTACAGATTCTGCATTGGGGTACTTCTaGACCTCCTTCAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RNLCQPWLDPTPGSSTDSALGYF*TSFSRR
Trigger: CCTCCTGCTGAAGGAGGTGCAGAAGTACCCCAATGC...AGAATCTGTAGAGGAGCCTGGAGTCGGATCTAGCCATGGCTGGCAGAGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGCATTGGGGTACTTCTaGACCTCCTTCAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEALGYF*TSFSRR
Trigger: CCTCCTGCTGAAGGAGGTGCAGAAGTACCCCAATGC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGGCCTCCTGGAAAACTaGTCAGAAGTCAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEGLLEN*SEVSRA
Trigger: GGCTCTGCTGACTTCTGAGCAGTTTTCCAGGAGGCC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGAAGCTGCCCTTTCTGTaGCAGGTCAGGCCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERKLPFL*QVRPRL
Trigger: GAGCCTTGGCCTGACCTGGCACAGAAAGGGCAGCTT...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCGACTGCACTGCCAGGTaGTCCTCCACGAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PGSSTDSKAQAQDEAILVDCTAR*SSTSLS
Trigger: GGACAAGCTCGTGGAGGACCACCTGGCAGTGCAGTC...GACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGACTCCTCAAACCTGGTaGACCGCACAAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERTPQTW*TAQAWP
Trigger: TGGCCAGGCTTGTGCGGTCCACCAGGTTTGAGGAGT...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGGAACTCCTCAAACCTaGTGGACCGCACAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERGTPQT*WTAQAW
Trigger: CCAGGCTTGTGCGGTCCACCAGGTTTGAGGAGTTCC...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGCAGCCGCCCTCTGTGTaGCATGCCCATGATCACGTA +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVQPPSV*HAHDHV
Trigger: TACGTGATCATGGGCATGCCACACAGAGGGCGGCTG...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GATCCGACTCCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTCAGCCGCCCTCTGTGTaGCATGCCCATGATCACGTA +
Preference number: 4 (lower is better)
Translates to: DPTPGSSTDSKAQAQDEAQPPSV*HAHDHV
Trigger: TACGTGATCATGGGCATGCCACACAGAGGGCGGCTG...AGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGGAGTCGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGTGGTGAAGCCGATCTaGTTGTTGACGACCACGTGC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEVVKPI*LLTTTC
Trigger: GCACGTGGTCGTCAACAACCAGATCGGCTTCACCAC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGTCCTCATACTCAGGCTaGTTGACCACACCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVESSYSG*LTTPCD
Trigger: GTCGCAGGGTGTGGTCAACCAGCCTGAGTATGAGGA...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp AGAAACCTCTGCCAGCCATGGCTAGATCCGACTCCAGGCTCCTCTACAGATTCTTCCTCATACTCAGGCTaGTTGACCACACCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: RNLCQPWLDPTPGSSTDSSSYSG*LTTPCD
Trigger: GTCGCAGGGTGTGGTCAACCAGCCTGAGTATGAGGA...AGAATCTGTAGAGGAGCCTGGAGTCGGATCTAGCCATGGCTGGCAGAGGTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGTCATGGAGCACATGGTaGCGGTGGCTGAATGTGCCC +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERSWSTW*RWLNVP
Trigger: GGGCACATTCAGCCACCGCCACCATGTGCTCCATGA...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GATCCGACTCCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTCCCGGGCAGATGAACTaGTCGATGATACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: DPTPGSSTDSKAQAQDEAPGQMN*SMIHWA
Trigger: GGCCCAGTGTATCATCGACCAGTTCATCTGCCCGGG...AGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGGAGTCGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGCCCGGGCAGATGAACTaGTCGATGATACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERPGQMN*SMIHWA
Trigger: GGCCCAGTGTATCATCGACCAGTTCATCTGCCCGGG...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGGCATCTCATCAAAGCTaGATCTGGCCTCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVASHQS*IWPRGG
Trigger: GCCACCCCGAGGCCAGATCCAGCTTTGATGAGATGC...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGTCTGGGATCACCCGCTaGAAGTGGGTTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERSGITR*KWVPGS
Trigger: GCTTCCAGGAACCCACTTCCAGCGGGTGATCCCAGA...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CAGCATCTACGAGAAGTTCTTGAAGACGTCCAGGTCGAAGGCCGTGTCCAGGAGGAGGTCAAAGGGGAATaGCGACAGCTGCTCAATCCT +
Preference number: 4 (lower is better)
Translates to: QHLREVLEDVQVEGRVQEEVKGE*RQLLNP
Trigger: AGGATTGAGCAGCTGTCGCCATTCCCCTTTGACCTC...CTCCTGGACACGGCCTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGTGCAGCTCCGTCAGGTaGGTCTTCTTGTTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVCSSVR*VFLLPV
Trigger: CACCGGCAACAAGAAGACCCACCTGACGGAGCTGCA...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
CDS-3UTR TCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGATGCTGGTCTGTTTTGTaGAAATGTCTTAACAGTCTG +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRCWSVL*KCLNSL
Trigger: CAGACTGTTAAGACATTTTCACAAAACAGACCAGCA...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCTGCTGGTCTGTTTTGTaGAAATGTCTTAACAGTCTG +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESCWSVL*KCLNSL
Trigger: CAGACTGTTAAGACATTTTCACAAAACAGACCAGCA...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACATGCTGGTCTGTTTTGTaGAAATGTCTTAACAGTCTG +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTCWSVL*KCLNSL
Trigger: CAGACTGTTAAGACATTTTCACAAAACAGACCAGCA...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTATCCTAGTGGGTGAGACTAAGTTTGTCTGTGGATaGGATAATGTCAGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: VTAEASTQGPVPILVGETKFVCG*DNVSGH
Trigger: GTGCCCGCTGACATTATCTCATCCACAGACAAACTT...AGTCTCACCCACTAGGATAGGAACTGGGCCTTGTGTGCTGGCTTCCGCTGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GATCCGACTCCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTTGTGTGGCATGCCCATaGTCACGTAGTCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: DPTPGSSTDSKAQAQDEACVACP*SRSPRH
Trigger: ATGGCGTGGACTACGTGATCATGGGCATGCCACACA...AGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGGAGTCGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGTGTGTGGCATGCCCATaGTCACGTAGTCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVCVACP*SRSPRH
Trigger: ATGGCGTGGACTACGTGATCATGGGCATGCCACACA...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAAGCTTTGAATCGAATTaGCAGAAGATCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LWGSQALEGDDSLTPMRASFESN*QKICSS
Trigger: GCTGGAACAGATCTTCTGTCAATTCGATTCAAAGCT...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGCTTTGCACACGTACATaGCAGCCTCGGGGTCATCTG +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVLCTRT*QPRGHL
Trigger: CAGATGACCCCGAGGCTGTCATGTACGTGTGCAAAG...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGCTTTGCACACGTACATaGCAGCCTCGGGGTCATCTG +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERLCTRT*QPRGHL
Trigger: CAGATGACCCCGAGGCTGTCATGTACGTGTGCAAAG...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp ACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATACAGGAGCTGCCCGTCCAGGGTaGAGAAGCCAGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TDSKAQAQDEAILVSNTGAARPG*RSQARE
Trigger: CTCCCTGGCCTGGCTTCTTCACCCTGGACGGGCAGC...TCCTGTATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCACGGCTCAGCCCTCCATaGATAGTAAAGTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGARLSPP*IVKFST
Trigger: TGTGGAAAACTTTACTATTCATGGAGGGCTGAGCCG...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGTCATATAGCTGATTaGTGTCGAAGTTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESSHIAD*CRSWLL
Trigger: AAGAAGCCAACTTCGACATCAATCAGCTATATGACT...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGAGTCATATAGCTGATTaGTGTCGAAGTTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: VNRTKTEQPVPRWWLPERSHIAD*CRSWLL
Trigger: AAGAAGCCAACTTCGACATCAATCAGCTATATGACT...CCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCACATTTTCTGGGTTCTaGGCTGCAGGGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVTFSGF*AAGPSS
Trigger: AGAAGATGGCCCTGCAGCTCAGAACCCAGAAAATGT...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGCTTTGCGCTCCCGGGTaGGGTCATAATACACTTTGC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVELCAPG*GHNTLC
Trigger: GCAAAGTGTATTATGACCTCACCCGGGAGCGCAAAG...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCCTCAGCAGCAACAGGTaGAGAATAGCACCGAATCTG +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVLSSNR*RIAPNL
Trigger: CAGATTCGGTGCTATTCTGCACCTGTTGCTGCTGAG...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCTCCTGCGGTGATACATaGCCAGGTGGTACTTCACAT +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVSCGDT*PGGTSH
Trigger: ATGTGAAGTACCACCTGGGCATGTATCACCGCAGGA...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGTCTCGTACACAATaGCCTGGCCAGCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVERSRTQ*PGQQMQ
Trigger: CTGCATTTGCTGGCCAGGGCATTGTGTACGAGACCT...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGTCTCGTTGTGGCCGTTaGGCCGGTAACACACCAAAT +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVESRCGR*AGNTPN
Trigger: ATTTGGTGTGTTACCGGCGCAACGGCCACAACGAGA...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCATGTAACACAGGCTTCTaGTTGCGGATCTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGACNTGF*LRICLY
Trigger: GTACAAGCAGATCCGCAAGCAGAAGCCTGTGTTACA...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGAATGTTCTGGACCCATaGCCTCCATGCCATGGGGCA +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERNVLDP*PPCHGA
Trigger: TGCCCCATGGCATGGAGGGCATGGGTCCAGAACATT...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGAATGTTCTGGACCCATaGCCTCCATGCCATGGGGCA +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVNVLDP*PPCHGA
Trigger: TGCCCCATGGCATGGAGGGCATGGGTCCAGAACATT...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCCATCTGGGTCATCGTTaGACATCTGCAAGAACCGCT +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVHLGHR*TSARTA
Trigger: AGCGGTTCTTGCAGATGTGCAACGATGACCCAGATG...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGGTCATAATACACTTTaGCGGTGCAGAAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAGHNTL*RCRREA
Trigger: GGCTTCTCTTCTGCACCGGCAAAGTGTATTATGACC...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGGGAATGGCGACAGCTaGTCAATCCTTGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERGNGDS*SILVMA
Trigger: GGCCATCACAAGGATTGAGCAGCTGTCGCCATTCCC...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGGCATTGGGGTACTTCTaGACCTCCTTCAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVALGYF*TSFSRR
Trigger: CCTCCTGCTGAAGGAGGTGCAGAAGTACCCCAATGC...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp ACGGCTGGGGCCCACCCTAGAAACCTCTGCCAGCCATGGCTAGATCCGACTCCAGTCAAGCCAATGCAATaGAAAGTTGTTTCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: TAGAHPRNLCQPWLDPTPVKPMQ*KVVSVP
Trigger: AGGAACAGAAACAACTTTGCATTGCATTGGCTTGAC...TGGAGTCGGATCTAGCCATGGCTGGCAGAGGTTTCTAGGGTGGGCCCCAGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222673.6
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGCTGGGAAGCCGTCAATaGCCTCAACTTAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVELGSRQ*PQLSST
Trigger: TGTGCTGCTAAGTTGAGGCCATTGACGGCTTCCCAG...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAAATGTCTTAACAGTCTaGGAAGCCGTCAATGGCCTC +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGANVLTV*EAVNGL
Trigger: GAGGCCATTGACGGCTTCCCAGACTGTTAAGACATT...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCACTCCTCAAACCTGGTaGACCGCACAAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PGSSTDSKAQAQDEAILVTPQTW*TAQAWP
Trigger: TGGCCAGGCTTGTGCGGTCCACCAGGTTTGAGGAGT...GACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGTCGTACACAATGCCCTaGCCAGCAAATGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVESYTMP*PANAAS
Trigger: GGATGCTGCATTTGCTGGCCAGGGCATTGTGTACGA...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CAGCCATGGCTAGATCCGACTCCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTATGAGTTGTGTAGGATaGCAGGTCGCTGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: QPWLDPTPGSSTDSKAQAMSCVG*QVAEVE
Trigger: TTCCACCTCAGCGACCTGCCATCCTACACAACTCAT...AGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGGAGTCGGATCTAGCCATGGCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGACAACCACGTCCTTGTaGAAGGTGCTCCTCCACTCG +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVTTTSL*KVLLHS
Trigger: CGAGTGGAGGAGCACCTTCCACAAGGACGTGGTTGT...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGTCCACATTCTGGTCATaGAGCACATGGTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERSTFWS*STWWRW
Trigger: CCACCGCCACCATGTGCTCCATGACCAGAATGTGGA...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGTCCACATTCTGGTCATaGAGCACATGGTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVSTFWS*STWWRW
Trigger: CCACCGCCACCATGTGCTCCATGACCAGAATGTGGA...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCCTCTTGTCCACATTCTaGTCATGGAGCACATGGTGG +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVLLSTF*SWSTWW
Trigger: CCACCATGTGCTCCATGACCAGAATGTGGACAAGAG...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCGCCAGAGATGGTTCATaGGGATGCAGGTTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVARDGS*GCRFSC
Trigger: ACAAGAGAACCTGCATCCCCATGAACCATCTCTGGC...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGTGGCGTCGTAGCACGTaGAAGAAGTTGCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERWRRST*KKLPGV
Trigger: CACTCCTGGCAACTTCTTCCACGTGCTACGACGCCA...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCCATCAAAGCTGGATCTaGCCTCGGGGTGGCGCAACA +
Preference number: 4 (lower is better)
Translates to: PGSSTDSKAQAQDEAILVHQSWI*PRGGAT
Trigger: TGTTGCGCCACCCCGAGGCCAGATCCAGCTTTGATG...GACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCGCATCTCATCAAAGCTaGATCTGGCCTCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PGSSTDSKAQAQDEAILVASHQS*IWPRGG
Trigger: GCCACCCCGAGGCCAGATCCAGCTTTGATGAGATGC...GACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGATCACCCGCTGGAAGTaGGTTCCTGGAAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEITRWK*VPGSIS
Trigger: TGAGATGCTTCCAGGAACCCACTTCCAGCGGGTGAT...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGAGGCCAGCTCAGCATTaGGGTACTTCTGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVRPAQH*GTSAPP
Trigger: AGGAGGTGCAGAAGTACCCCAATGCTGAGCTGGCCT...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGAGGCCAGCTCAGCATTaGGGTACTTCTGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERRPAQH*GTSAPP
Trigger: AGGAGGTGCAGAAGTACCCCAATGCTGAGCTGGCCT...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAGCACAAGTCCTTAAATaGAACATTTTTGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTAQVLK*NIFVLK
Trigger: CTTCAGGACAAAAATGTTTCATTTAAGGACTTGTGC...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGCCGTACTCAGACAGTaGGCTGTTGCACACAGTATA +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEAVLRQ*AVAHSI
Trigger: TATACTGTGTGCAACAGCTCACTGTCTGAGTACGGC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGCAGGAGTGGAGCAGTTaGCAACAACCCAATTGCAGT +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEQEWSS*QQPNCS
Trigger: ACTGCAATTGGGTTGTTGTCAACTGCTCCACTCCTG...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGCTTTGCGCTCCCGGGTaGGGTCATAATACACTTTGC +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVLCAPG*GHNTLC
Trigger: GCAAAGTGTATTATGACCTCACCCGGGAGCGCAAAG...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp ACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATACAGGACGGGCTTGGCGCGGCTaGTGGTGGTCCGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: TDSKAQAQDEAILVSNTGRAWRG*WWSEVL
Trigger: CAAGACTTCGGACCACCATCAGCCGCGCCAAGCCCG...TCCTGTATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGTCTACGAGAAGTTCTTaGAGACGTCCAGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVESTRSS*RRPGRR
Trigger: CCTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGA...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGCACTATTCTTTAGTTaGGAAGCAAGGGGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAALFFS*EARGSH
Trigger: ATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGC...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAATAGAACCCCACGTTTaGAGAAACAGTTACTGGAGC +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAIEPHV*RNSYWS
Trigger: GCTCCAGTAACTGTTTCTTCAAACGTGGGGTTCTAT...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449767.5
CDS-3UTR GCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGCTCAGCAGCAACAGGTaGAGAATAGCACCGAATCTG +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVELSSNR*RIAPNL
Trigger: CAGATTCGGTGCTATTCTGCACCTGTTGCTGCTGAG...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGAGGTCTCGTACACAATaGCCTGGCCAGCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERRSRTQ*PGQQMQ
Trigger: CTGCATTTGCTGGCCAGGGCATTGTGTACGAGACCT...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGAGGTCTCGTACACAATaGCCTGGCCAGCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVRSRTQ*PGQQMQ
Trigger: CTGCATTTGCTGGCCAGGGCATTGTGTACGAGACCT...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGTCTCGTTGTGGCCGTTaGGCCGGTAACACACCAAAT +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVSRCGR*AGNTPN
Trigger: ATTTGGTGTGTTACCGGCGCAACGGCCACAACGAGA...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGTCTCGTTGTGGCCGTTaGGCCGGTAACACACCAAAT +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERSRCGR*AGNTPN
Trigger: ATTTGGTGTGTTACCGGCGCAACGGCCACAACGAGA...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAAGCCAGTGCTTAATGTaGAAGATCTTCTCATCTTTA +
Preference number: 4 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRSQCLM*KIFSSL
Trigger: TAAAGATGAGAAGATCTTGCACATTAAGCACTGGCT...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCGATGGTTCATGGGGATaGAGGTTCTCTTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVDGSWG*RFSCPH
Trigger: ATGTGGACAAGAGAACCTGCATCCCCATGAACCATC...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp AGCATCTACGAGAAGTTCTTGAAGACGTCCAGGTCGAAGGCCGTGTCCAGGAGGGATGGTTCATGGGGATaGAGGTTCTCTTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: SIYEKFLKTSRSKAVSRRDGSWG*RFSCPH
Trigger: ATGTGGACAAGAGAACCTGCATCCCCATGAACCATC...CCTCCTGGACACGGCCTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGCAGACAGTGAGCTGTTaGACACAGTATAGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERQTVSC*TQYRGP
Trigger: AGGCCCCCTATACTGTGTGCAACAGCTCACTGTCTG...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGCAGACAGTGAGCTGTTaGACACAGTATAGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVQTVSC*TQYRGP
Trigger: AGGCCCCCTATACTGTGTGCAACAGCTCACTGTCTG...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGTTCTGGGTTCTGAGCTaGAGGGCCATCTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERFWVLS*RAIFWD
Trigger: ATCCCAGAAGATGGCCCTGCAGCTCAGAACCCAGAA...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGCTGGGAAGCCGTCAATaGCCTCAACTTAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVLGSRQ*PQLSST
Trigger: TGTGCTGCTAAGTTGAGGCCATTGACGGCTTCCCAG...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGATGAGTTGTGTAGGATaGCAGGTCGCTGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEMSCVG*QVAEVE
Trigger: TTCCACCTCAGCGACCTGCCATCCTACACAACTCAT...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGAGTTCACGTGGAAAATaGGGGCATTCACCACTCGGG +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVSSRGK*GHSPLG
Trigger: CCCGAGTGGTGAATGCCCCCATTTTCCACGTGAACT...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGCCAGAGATGGTTCATaGGGATGCAGGTTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEARDGS*GCRFSC
Trigger: ACAAGAGAACCTGCATCCCCATGAACCATCTCTGGC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGGCTTCTTTAAGGTCTaGCAGGACATCTGGGTCATC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEGFFKV*QDIWVI
Trigger: GATGACCCAGATGTCCTGCCAGACCTTAAAGAAGCC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGATCACCCGCTGGAAGTaGGTTCCTGGAAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVITRWK*VPGSIS
Trigger: TGAGATGCTTCCAGGAACCCACTTCCAGCGGGTGAT...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGGAGGTCAAAGGGGAATaGCGACAGCTGCTCAATCCT +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVEVKGE*RQLLNP
Trigger: AGGATTGAGCAGCTGTCGCCATTCCCCTTTGACCTC...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGAGGTCAAAGGGGAATaGCGACAGCTGCTCAATCCT +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVEREVKGE*RQLLNP
Trigger: AGGATTGAGCAGCTGTCGCCATTCCCCTTTGACCTC...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCGGTGGTCCGAAGTCTTaGCTTCACGTAGTCATAGTA +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVGGPKS*LHVVIV
Trigger: TACTATGACTACGTGAAGCCAAGACTTCGGACCACC...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAAGTTTGTCTGTGGATaGGATAATGTCAGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEKFVCG*DNVSGH
Trigger: GTGCCCGCTGACATTATCTCATCCACAGACAAACTT...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGCGGCTCAGCCCTCCATaGATAGTAAAGTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVERLSPP*IVKFST
Trigger: TGTGGAAAACTTTACTATTCATGGAGGGCTGAGCCG...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGCAGGAGTGGAGCAGTTaGCAACAACCCAATTGCAGT +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERQEWSS*QQPNCS
Trigger: ACTGCAATTGGGTTGTTGTCAACTGCTCCACTCCTG...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAAGAAGAGAAGCCTTTTaGCATTTTCTGGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGARREAF*HFLGSE
Trigger: CTCAGAACCCAGAAAATGTCAAAAGGCTTCTCTTCT...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGTCTACGAGAAGTTCTTaGAGACGTCCAGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVSTRSS*RRPGRR
Trigger: CCTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGA...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGTCTACGAGAAGTTCTTaGAGACGTCCAGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERSTRSS*RRPGRR
Trigger: CCTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGA...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCGCACTATTCTTTAGTTaGGAAGCAAGGGGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVALFFS*EARGSH
Trigger: ATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGC...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCTTCGAAGTCGTTCCTTaGAAACTGCAAGATCCACGT +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVFEVVP*KLQDPR
Trigger: ACGTGGATCTTGCAGTTTTCAAGGAACGACTTCGAA...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447398.5
CDS-3UTR GCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGCTCAGCAGCAACAGGTaGAGAATAGCACCGAATCTG +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERLSSNR*RIAPNL
Trigger: CAGATTCGGTGCTATTCTGCACCTGTTGCTGCTGAG...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGTCCTGCGGTGATACATaGCCAGGTGGTACTTCACAT +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERSCGDT*PGGTSH
Trigger: ATGTGAAGTACCACCTGGGCATGTATCACCGCAGGA...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGGAGAGTCCAGCCAGTaGTTAATGTGCAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEGESSQ*LMCKIF
Trigger: GAAGATCTTGCACATTAAGCACTGGCTGGACTCTCC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp TCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATACAGGAGCCTGTTCAGCCGAATGTGGATaGCCTCCTTCAGGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: SKAQAQDEAILVSNTGACSAECG*PPSGAS
Trigger: GCTCGCTCCTGAAGGAGGGCATCCACATTCGGCTGA...ACAGGCTCCTGTATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGATGGTTCATGGGGATaGAGGTTCTCTTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEDGSWG*RFSCPH
Trigger: ATGTGGACAAGAGAACCTGCATCCCCATGAACCATC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGCATCTGGGTCATCGTTaGACATCTGCAAGAACCGCT +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERHLGHR*TSARTA
Trigger: AGCGGTTCTTGCAGATGTGCAACGATGACCCAGATG...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTATCCTAGTCAGCAAAGAAAACGATaGATCAGAAAGTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: ALLGDSGSQHTRPSSYPSQQRKR*IRKSPL
Trigger: CAATGGAGACTTTCTGATGCATCGTTTTCTTTGCTG...ACTAGGATAGGAACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGAGAGGATCAAGTTTTaGAATGTGGTGACCCCTGAC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEERIKF*NVVTPD
Trigger: GTCAGGGGTCACCACATTGCAAAACTTGATCCTCTC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000447398.5
ENST00000449767.5
CDS-3UTR CCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGAAAACTGTTCGGCTTTaGTCTTGCCCATCACCACGG +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERKTVRL*SCPSPR
Trigger: CCGTGGTGATGGGCAAGACCAAAGCCGAACAGTTTT...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGATGAGTTGTGTAGGATaGCAGGTCGCTGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVMSCVG*QVAEVE
Trigger: TTCCACCTCAGCGACCTGCCATCCTACACAACTCAT...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp ACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATACAGGAAGCACATGGTGGCGGTaGCTGAATGTGCCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: TDSKAQAQDEAILVSNTGSTWWR*LNVPRS
Trigger: GGAGCGGGGCACATTCAGCCACCGCCACCATGTGCT...TCCTGTATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGCTCTTGTCCACATTCTaGTCATGGAGCACATGGTGG +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERLLSTF*SWSTWW
Trigger: CCACCATGTGCTCCATGACCAGAATGTGGACAAGAG...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCCAGAGATGGTTCATaGGGATGCAGGTTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERARDGS*GCRFSC
Trigger: ACAAGAGAACCTGCATCCCCATGAACCATCTCTGGC...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGGCCAGAGATGGTTCATaGGGATGCAGGTTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVARDGS*GCRFSC
Trigger: ACAAGAGAACCTGCATCCCCATGAACCATCTCTGGC...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGGGCTTCTTTAAGGTCTaGCAGGACATCTGGGTCATC +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVGFFKV*QDIWVI
Trigger: GATGACCCAGATGTCCTGCCAGACCTTAAAGAAGCC...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGGTGGTCCGAAGTCTTaGCTTCACGTAGTCATAGTA +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEGGPKS*LHVVIV
Trigger: TACTATGACTACGTGAAGCCAAGACTTCGGACCACC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCAGCTTTGAATCGAATTaGCAGAAGATCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVSFESN*QKICSS
Trigger: GCTGGAACAGATCTTCTGTCAATTCGATTCAAAGCT...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGCGGCTCAGCCCTCCATaGATAGTAAAGTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERRLSPP*IVKFST
Trigger: TGTGGAAAACTTTACTATTCATGGAGGGCTGAGCCG...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAAGTCATATAGCTGATTaGTGTCGAAGTTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGASHIAD*CRSWLL
Trigger: AAGAAGCCAACTTCGACATCAATCAGCTATATGACT...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCTTGCAGTCATATAGCTaGTTGATGTCGAAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVLQSYS*LMSKLA
Trigger: AGCCAACTTCGACATCAATCAGCTATATGACTGCAA...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCTACGAGAAGTTCTTaGAGACGTCCAGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: PGSSTDSKAQAQDEAILVSTRSS*RRPGRR
Trigger: CCTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGA...GACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGTCCTCATTTGTGAACTaGATGATCCCAGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVSSFVN*MIPGVS
Trigger: TGAGACCCCTGGGATCATGCAGTTCACAAATGAGGA...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGTGTAACACAGGCTTCTaGTTGCGGATCTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVCNTGF*LRICLY
Trigger: GTACAAGCAGATCCGCAAGCAGAAGCCTGTGTTACA...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp TCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATTGGTTGACCACACCCTaGGACACCAGCAGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: SSTDSKAQAQDEAILVSNWLTTP*DTSSSA
Trigger: CGCTGAGCTGCTGGTGTCGCAGGGTGTGGTCAACCA...ATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGGATGGTTCATGGGGATaGAGGTTCTCTTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVDGSWG*RFSCPH
Trigger: ATGTGGACAAGAGAACCTGCATCCCCATGAACCATC...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGGTCATAATACACTTTaGCGGTGCAGAAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERGHNTL*RCRREA
Trigger: GGCTTCTCTTCTGCACCGGCAAAGTGTATTATGACC...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp TCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATAGTGGGTCTTCTTGTTaGCGGTGGCTGGAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SSTDSKAQAQDEAILVSNSGSSC*RWLEQP
Trigger: CGGCTGCTCCAGCCACCGGCAACAAGAAGACCCACT...ATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631326.2
CDS-3UTR CCA 90 bp CAGCATCTACGAGAAGTTCTTGAAGACGTCCAGGTCGAAGGCCGTGTCCAGGAGACTTATGTACACTTTTaGGGTTTTCCAGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: QHLREVLEDVQVEGRVQETYVHF*GFPAKH
Trigger: GTGCTTGGCTGGAAAACCCCAAAAGTGTACATAAGT...CTCCTGGACACGGCCTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631326.2
CDS-3UTR CCA 90 bp CCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCAAAACTGTTCGGCTTTaGTCTTGCCCATCACCACGG +
Preference number: 4 (lower is better)
Translates to: PGSSTDSKAQAQDEAILVKTVRL*SCPSPR
Trigger: CCGTGGTGATGGGCAAGACCAAAGCCGAACAGTTTT...GACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGTCATCTGAGTTCACGTaGAAAATGGGGGCATTCACC +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVSSEFT*KMGAFT
Trigger: GGTGAATGCCCCCATTTTCCACGTGAACTCAGATGA...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp TCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATGGCGGAGGAATGTTCTaGACCCATGCCCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: SSTDSKAQAQDEAILVSNGGGMF*THALHA
Trigger: GGCATGGAGGGCATGGGTCCAGAACATTCCTCCGCC...ATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGCTGGAAGTGGGTTCCTaGAAGCATCTCATCAAAGCT +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVLEVGS*KHLIKA
Trigger: AGCTTTGATGAGATGCTTCCAGGAACCCACTTCCAG...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGCTGGAAGTGGGTTCCTaGAAGCATCTCATCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERLEVGS*KHLIKA
Trigger: AGCTTTGATGAGATGCTTCCAGGAACCCACTTCCAG...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp AGCATCTACGAGAAGTTCTTGAAGACGTCCAGGTCGAAGGCCGTGTCCAGGAGGTCTTCTGACCTGCTTTaGCACAGCAAAGAAAACGAT +
Preference number: 4 (lower is better)
Translates to: SIYEKFLKTSRSKAVSRRSSDLL*HSKEND
Trigger: ATCGTTTTCTTTGCTGTGCCAAAGCAGGTCAGAAGA...CCTCCTGGACACGGCCTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGCACAAGTCCTTAAATaGAACATTTTTGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAAQVLK*NIFVLK
Trigger: CTTCAGGACAAAAATGTTTCATTTAAGGACTTGTGC...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCTGCTGGTCTGTTTTGTaGAAATGTCTTAACAGTCTG +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVCWSVL*KCLNSL
Trigger: CAGACTGTTAAGACATTTTCACAAAACAGACCAGCA...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CAGCCATGGCTAGATCCGACTCCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTTGCTGGTCTGTTTTGTaGAAATGTCTTAACAGTCTG +
Preference number: 4 (lower is better)
Translates to: QPWLDPTPGSSTDSKAQACWSVL*KCLNSL
Trigger: CAGACTGTTAAGACATTTTCACAAAACAGACCAGCA...AGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGGAGTCGGATCTAGCCATGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGAGCTGCCTCCAGCTTTaGATCGAATTGACAGAAGAT +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVSCLQL*IELTED
Trigger: ATCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGCT...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp AGAAACCTCTGCCAGCCATGGCTAGATCCGACTCCAGGCTCCTCTACAGATTCTAGAAGAGAAGCCTTTTaGCATTTTCTGGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: RNLCQPWLDPTPGSSTDSRREAF*HFLGSE
Trigger: CTCAGAACCCAGAAAATGTCAAAAGGCTTCTCTTCT...AGAATCTGTAGAGGAGCCTGGAGTCGGATCTAGCCATGGCTGGCAGAGGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGAAGAGAAGCCTTTTaGCATTTTCTGGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVERREAF*HFLGSE
Trigger: CTCAGAACCCAGAAAATGTCAAAAGGCTTCTCTTCT...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCATCGTTCCTTGAAAACTaGAAGATCAAGTTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: AVVWAALRHYSLVEKQGASFLEN*KIKFVC
Trigger: ACAGACAAACTTGATCTTGCAGTTTTCAAGGAACGA...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444676.5
CDS-3UTR CCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGACTTATGTACACTTTTaGGGTTTTCCAGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVETYVHF*GFPAKH
Trigger: GTGCTTGGCTGGAAAACCCCAAAAGTGTACATAAGT...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp ACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATACAGGATCATGGAGCACATGGTaGCGGTGGCTGAATGTGCCC +
Preference number: 4 (lower is better)
Translates to: TDSKAQAQDEAILVSNTGSWSTW*RWLNVP
Trigger: GGGCACATTCAGCCACCGCCACCATGTGCTCCATGA...TCCTGTATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp ACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATACAGGATCTGGGATCACCCGCTaGAAGTGGGTTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TDSKAQAQDEAILVSNTGSGITR*KWVPGS
Trigger: GCTTCCAGGAACCCACTTCCAGCGGGTGATCCCAGA...TCCTGTATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp TCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATAACCTCTGCCAGCCATaGCTAGATCCGACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSTDSKAQAQDEAILVSNNLCQP*LDPTPG
Trigger: GCCTGGAGTCGGATCTAGCCATGGCTGGCAGAGGTT...ATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGAGCTTTGAATCGAATTaGCAGAAGATCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERSFESN*QKICSS
Trigger: GCTGGAACAGATCTTCTGTCAATTCGATTCAAAGCT...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGTCATATAGCTGATTaGTGTCGAAGTTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVESHIAD*CRSWLL
Trigger: AAGAAGCCAACTTCGACATCAATCAGCTATATGACT...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGTTGCAGTCATATAGCTaGTTGATGTCGAAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERLQSYS*LMSKLA
Trigger: AGCCAACTTCGACATCAATCAGCTATATGACTGCAA...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGTTCGAAGTCGTTCCTTaGAAACTGCAAGATCAAGTT +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEFEVVP*KLQDQV
Trigger: AACTTGATCTTGCAGTTTTCAAGGAACGACTTCGAA...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444676.5
CDS-3UTR GCA 90 bp GCAAAGAAAACGATGCATCAGAAAGTCTCCATTGGGTTAAAGGAGAAAGAAAGATGGTTGACCACACCCTaGGACACCAGCAGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: AKKTMHQKVSIGLKEKERWLTTP*DTSSSA
Trigger: CGCTGAGCTGCTGGTGTCGCAGGGTGTGGTCAACCA...TCTTTCTTTCTCCTTTAACCCAATGGAGACTTTCTGATGCATCGTTTTCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCAGCCAGTGCTTAATGTaGAAGATCTTCTCATCTTTA +
Preference number: 4 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVSQCLM*KIFSSL
Trigger: TAAAGATGAGAAGATCTTGCACATTAAGCACTGGCT...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGCAGCAAAGAAAACGATaGATCAGAAAGTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEQQRKR*IRKSPL
Trigger: CAATGGAGACTTTCTGATGCATCGTTTTCTTTGCTG...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGACTTATGTACACTTTTaGGGTTTTCCAGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVTYVHF*GFPAKH
Trigger: GTGCTTGGCTGGAAAACCCCAAAAGTGTACATAAGT...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGCACAAGTCCTTAAATaGAACATTTTTGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEAQVLK*NIFVLK
Trigger: CTTCAGGACAAAAATGTTTCATTTAAGGACTTGTGC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR TCA 90 bp GCAAAGAAAACGATGCATCAGAAAGTCTCCATTGGGTTAAAGGAGAAAGAAAGAGGTCAGAGTGATAAATaGGGGGCAGCTGGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: AKKTMHQKVSIGLKEKERGQSDK*GAAGPL
Trigger: CAAGGGGCCAGCTGCCCCTCATTTATCACTCTGACC...TCTTTCTTTCTCCTTTAACCCAATGGAGACTTTCTGATGCATCGTTTTCTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp TCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATCCCTCGTATCTGATATaGCCTGATGAGCGACTGCAC +
Preference number: 4 (lower is better)
Translates to: SSTDSKAQAQDEAILVSNPSYLI*PDERLH
Trigger: GTGCAGTCGCTCATCAGGGCATATCAGATACGAGGG...ATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp ACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATACAGGACTTCCTGATGACATTTaGAAGCACGTTCAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: TDSKAQAQDEAILVSNTGLPDDI*KHVQPP
Trigger: GGGCGGCTGAACGTGCTTGCAAATGTCATCAGGAAG...TCCTGTATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp TCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATTCTCGTTGTGGCCGTTaGGCCGGTAACACACCAAAT +
Preference number: 4 (lower is better)
Translates to: SSTDSKAQAQDEAILVSNSRCGR*AGNTPN
Trigger: ATTTGGTGTGTTACCGGCGCAACGGCCACAACGAGA...ATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR GCA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGCCAGTGCTTAATGTaGAAGATCTTCTCATCTTTA +
Preference number: 4 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVESQCLM*KIFSSL
Trigger: TAAAGATGAGAAGATCTTGCACATTAAGCACTGGCT...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp GCAAAGAAAACGATGCATCAGAAAGTCTCCATTGGGTTAAAGGAGAAAGAAAGATCAGCCGAATGTGGATaGCCTCCTTCAGGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: AKKTMHQKVSIGLKEKERSAECG*PPSGAS
Trigger: GCTCGCTCCTGAAGGAGGGCATCCACATTCGGCTGA...TCTTTCTTTCTCCTTTAACCCAATGGAGACTTTCTGATGCATCGTTTTCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp TCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATACAGGAGCCTGTAATGTCTTAACAGTCTaGGAAGCCGTCAATGGCCTC +
Preference number: 4 (lower is better)
Translates to: SKAQAQDEAILVSNTGACNVLTV*EAVNGL
Trigger: GAGGCCATTGACGGCTTCCCAGACTGTTAAGACATT...ACAGGCTCCTGTATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GCAAAGAAAACGATGCATCAGAAAGTCTCCATTGGGTTAAAGGAGAAAGAAAGAACTCCTCAAACCTGGTaGACCGCACAAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: AKKTMHQKVSIGLKEKERTPQTW*TAQAWP
Trigger: TGGCCAGGCTTGTGCGGTCCACCAGGTTTGAGGAGT...TCTTTCTTTCTCCTTTAACCCAATGGAGACTTTCTGATGCATCGTTTTCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GCAAAGAAAACGATGCATCAGAAAGTCTCCATTGGGTTAAAGGAGAAAGAAAGATGCAGGGCCATCTTCTaGGATCACCCGCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: AKKTMHQKVSIGLKEKERCRAIF*DHPLEV
Trigger: CACTTCCAGCGGGTGATCCCAGAAGATGGCCCTGCA...TCTTTCTTTCTCCTTTAACCCAATGGAGACTTTCTGATGCATCGTTTTCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp TCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATACAGGAGCCTGTGGTGGTCCGAAGTCTTaGCTTCACGTAGTCATAGTA +
Preference number: 4 (lower is better)
Translates to: SKAQAQDEAILVSNTGACGGPKS*LHVVIV
Trigger: TACTATGACTACGTGAAGCCAAGACTTCGGACCACC...ACAGGCTCCTGTATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCACAAGTCCTTAAATaGAACATTTTTGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERAQVLK*NIFVLK
Trigger: CTTCAGGACAAAAATGTTTCATTTAAGGACTTGTGC...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR GCA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGAGCCAGTGCTTAATGTaGAAGATCTTCTCATCTTTA +
Preference number: 4 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERSQCLM*KIFSSL
Trigger: TAAAGATGAGAAGATCTTGCACATTAAGCACTGGCT...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CCA 90 bp ACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATACAGGAATGAGTTGTGTAGGATaGCAGGTCGCTGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: TDSKAQAQDEAILVSNTGMSCVG*QVAEVE
Trigger: TTCCACCTCAGCGACCTGCCATCCTACACAACTCAT...TCCTGTATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GCAAAGAAAACGATGCATCAGAAAGTCTCCATTGGGTTAAAGGAGAAAGAAAGATCCACATTCTGGTCATaGAGCACATGGTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: AKKTMHQKVSIGLKEKERSTFWS*STWWRW
Trigger: CCACCGCCACCATGTGCTCCATGACCAGAATGTGGA...TCTTTCTTTCTCCTTTAACCCAATGGAGACTTTCTGATGCATCGTTTTCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR TCA 90 bp TCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATACAGGAGCCTGTAGCTTTGAATCGAATTaGCAGAAGATCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SKAQAQDEAILVSNTGACSFESN*QKICSS
Trigger: GCTGGAACAGATCTTCTGTCAATTCGATTCAAAGCT...ACAGGCTCCTGTATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp GCAAAGAAAACGATGCATCAGAAAGTCTCCATTGGGTTAAAGGAGAAAGAAAGACTGGGAAGCCGTCAATaGCCTCAACTTAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: AKKTMHQKVSIGLKEKERLGSRQ*PQLSST
Trigger: TGTGCTGCTAAGTTGAGGCCATTGACGGCTTCCCAG...TCTTTCTTTCTCCTTTAACCCAATGGAGACTTTCTGATGCATCGTTTTCTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CCA 90 bp ACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATACAGGAACTTATGTACACTTTTaGGGTTTTCCAGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: TDSKAQAQDEAILVSNTGTYVHF*GFPAKH
Trigger: GTGCTTGGCTGGAAAACCCCAAAAGTGTACATAAGT...TCCTGTATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp GGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCCACGGCTGGGGGCACGGTGCCATGAGTaGTGTAGGATGGCAGGTCGC +
Preference number: 5 (lower is better)
Translates to: GSLLPAAPGHPQFTPRLGARCHE*CRMAGR
Trigger: GCGACCTGCCATCCTACACAACTCATGGCACCGTGC...CCCCAGCCGTGGCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp CAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCCACGCATACCAGACGGGCTaGGCGCGGCTGATGGTGGTC +
Preference number: 5 (lower is better)
Translates to: QAKALSCQLPRVILSSRHAYQTG*ARLMVV
Trigger: GACCACCATCAGCCGCGCCAAGCCCGTCTGGTATGC...GTGGCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp GCCCCGGGTCATCCTCAGTTCACGCCACGGCTGGGGCCCACCCTAGAAACCTCTGCATACCAGACGGGCTaGGCGCGGCTGATGGTGGTC +
Preference number: 5 (lower is better)
Translates to: APGHPQFTPRLGPTLETSAYQTG*ARLMVV
Trigger: GACCACCATCAGCCGCGCCAAGCCCGTCTGGTATGC...AGAGGTTTCTAGGGTGGGCCCCAGCCGTGGCGTGAACTGAGGATGACCCGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS GCA 90 bp CTCCACGAGCTTGTCCACGTTGGGCTGTGCTTCTACCAGGGACTGTaGATGGGCCACAGCAGCCAGGGAGCCTCGGCTCAGGGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: LHELVHVGLCFYQGL*MGHSSQGASAQGKG
Trigger: CCCCTTCCCCTGAGCCGAGGCTCCCTGGCTGCTGTGGCCCATGCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGACAAGCTCGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222673.6
ENST00000419661.5
ENST00000443864.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS GCA 90 bp ATATCCTCCGTCAGACCCGTGGAGGGGCAGGACATGCTCCTGGGCTaGCCGTCCAGGGTGAAGAAGCCAGGCCAGGGAGAGTCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: ISSVRPVEGQDMLLG*PSRVKKPGQGESSQ
Trigger: CTGGCTGGACTCTCCCTGGCCTGGCTTCTTCACCCTGGACGGGCAGCCCAGGAGCATGTCCTGCCCCTCCACGGGTCTGACGGAGGATAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCCGTCAGTGGGTCTTCTaGTTGCCGGTGGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: GPRQSSQCPGGGYLSGASRQWVF*LPVAGA
Trigger: TGCTCCAGCCACCGGCAACAAGAAGACCCACTGACG...GGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631326.2
CDS CCA 90 bp ACGAGCTTGTCCACGTTGGGCTGTGCTTCTACCAGGGACTGTGCATaGGCCACAGCAGCCAGGGAGCCTCGGCTCAGGGGAAGGGGACTC +
Preference number: 5 (lower is better)
Translates to: TSLSTLGCASTRDCA*ATAAREPRLRGRGL
Trigger: GAGTCCCCTTCCCCTGAGCCGAGGCTCCCTGGCTGCTGTGGCCCATGCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGACAAGCTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222673.6
ENST00000419661.5
ENST00000443864.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCCACCACTCGGCCGCCACTTaGCACACGTACATGACAGCC +
Preference number: 5 (lower is better)
Translates to: QAKALSCQLPRVILSSRHHSAAT*HTYMTA
Trigger: GGCTGTCATGTACGTGTGCAAAGTGGCGGCCGAGTG...GTGGCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp TGTGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGCACTCGGCCGCCACTTaGCACACGTACATGACAGCC +
Preference number: 5 (lower is better)
Translates to: CARSGQGSLLPAAPGHPQHSAAT*HTYMTA
Trigger: GGCTGTCATGTACGTGTGCAAAGTGGCGGCCGAGTG...CTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp CTGCCCTTTCTGTGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATACTCAGGCTGGTaGACCACACCCTGCGACACC +
Preference number: 5 (lower is better)
Translates to: LPFLCQVRPRLSPASCPGSYSGW*TTPCDT
Trigger: GGTGTCGCAGGGTGTGGTCAACCAGCCTGAGTATGA...CCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCACAGAAAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp TGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTTTCTGCCGCACCCACTaGGCTTGTCCCGGGCAGATG +
Preference number: 5 (lower is better)
Translates to: CQVRPRLSPASCPGSSSVFCRTH*ACPGQM
Trigger: CATCTGCCCGGGACAAGCCAAGTGGGTGCGGCAGAA...AACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAGCATACCAGACGGGCTaGGCGCGGCTGATGGTGGTC +
Preference number: 5 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTAYQTG*ARLMVV
Trigger: GACCACCATCAGCCGCGCCAAGCCCGTCTGGTATGC...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp AAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTTCGACAACCACGTCCTaGTGGAAGGTGCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: KTEQPVPRWWLPERGFLASTTTS*WKVLLH
Trigger: GTGGAGGAGCACCTTCCACAAGGACGTGGTTGTCGA...AGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGATTCTGCCGCACCCACTaGGCTTGTCCCGGGCAGATG +
Preference number: 5 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRFCRTH*ACPGQM
Trigger: CATCTGCCCGGGACAAGCCAAGTGGGTGCGGCAGAA...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp TTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGTTCTGCCGCACCCACTaGGCTTGTCCCGGGCAGATG +
Preference number: 5 (lower is better)
Translates to: LTGPRQSSQCPGGGYLSGFCRTH*ACPGQM
Trigger: CATCTGCCCGGGACAAGCCAAGTGGGTGCGGCAGAA...CCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp ACGGCTGGGGCCCACCCTAGAAACCTCTGCCAGCCATGGCTAGATCCGACTCCAACCATGTCGCGTGCTTaGCGCTCCCGGGTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: TAGAHPRNLCQPWLDPTPTMSRA*RSRVRS
Trigger: TGACCTCACCCGGGAGCGCAAAGCACGCGACATGGT...TGGAGTCGGATCTAGCCATGGCTGGCAGAGGTTTCTAGGGTGGGCCCCAGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp TGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCAGGCCAGCTCAGCATaGGGGTACTTCTGCACCTCC +
Preference number: 5 (lower is better)
Translates to: CQVRPRLSPASCPGSSSVQASSA*GYFCTS
Trigger: GGAGGTGCAGAAGTACCCCAATGCTGAGCTGGCCTG...AACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp ACAGGAGCCTGTGCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTCAGTGGGTCTTCTTGTaGCCGGTGGCTGGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: TGACALLGDSGSQHTRPSQWVFL*PVAGAA
Trigger: GGCTGCTCCAGCCACCGGCAACAAGAAGACCCACTG...ACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631326.2
CDS-3UTR CAA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAGCACGGTGCCATGAGTaGTGTAGGATGGCAGGTCGC +
Preference number: 5 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTARCHE*CRMAGR
Trigger: GCGACCTGCCATCCTACACAACTCATGGCACCGTGC...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCGCACGGTGCCATGAGTaGTGTAGGATGGCAGGTCGC +
Preference number: 5 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESARCHE*CRMAGR
Trigger: GCGACCTGCCATCCTACACAACTCATGGCACCGTGC...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAAGGTGGGTCTTCTTGTaGCCGGTGGCTGGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: LWGSQALEGDDSLTPMRARWVFL*PVAGAA
Trigger: GGCTGCTCCAGCCACCGGCAACAAGAAGACCCACCT...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
CDS-3UTR CAA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAGTCAGGTGGGTCTTCTaGTTGCCGGTGGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTVRWVF*LPVAGA
Trigger: TGCTCCAGCCACCGGCAACAAGAAGACCCACCTGAC...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
CDS GCA 90 bp AAGTTCTTGAAGACGTCCAGGTCGAAGGCCGTGTCCAGGAGGCGCTaGAGCTCCGTCAGGTGGGTCTTCTTGTTGCCGGTGGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: KFLKTSRSKAVSRRR*SSVRWVFLLPVAGA
Trigger: TGCTCCAGCCACCGGCAACAAGAAGACCCACCTGACGGAGCTGCAGCGCCTCCTGGACACGGCCTTCGACCTGGACGTCTTCAAGAACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
CDS GCA 90 bp AAGTTCTTGAAGACGTCCAGGTCGAAGGCCGTGTCCAGGAGGCGCTaGAGCTCCGTCAGTGGGTCTTCTTGTTGCCGGTGGCTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: KFLKTSRSKAVSRRR*SSVSGSSCCRWLEQ
Trigger: CTGCTCCAGCCACCGGCAACAAGAAGACCCACTGACGGAGCTGCAGCGCCTCCTGGACACGGCCTTCGACCTGGACGTCTTCAAGAACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631326.2
CDS-3UTR CAA 90 bp ACAGGAGCCTGTGCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTACGAGCTTGTCCACGTaGGGCTGTGCTTCTACCAGG +
Preference number: 5 (lower is better)
Translates to: TGACALLGDSGSQHTRPSTSLST*GCASTR
Trigger: CCTGGTAGAAGCACAGCCCAACGTGGACAAGCTCGT...ACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp CCTGTGCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTATCTGGTCCTCCACGAGCTaGTCCACGTTGGGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: PVPCWVTAEASTQGPVPIWSSTS*STLGCA
Trigger: AGCACAGCCCAACGTGGACAAGCTCGTGGAGGACCA...GATAGGAACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCATGGTCCTCCACGAGCTaGTCCACGTTGGGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAWSSTS*STLGCA
Trigger: AGCACAGCCCAACGTGGACAAGCTCGTGGAGGACCA...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp TCATCCTCAGTTCACGCCACGGCTGGGGCCCACCCTAGAAACCTCTGCCAGCCATGTTCGGCTTTGGTCTaGCCCATCACCACGGGGTCA +
Preference number: 5 (lower is better)
Translates to: SSSVHATAGAHPRNLCQPCSALV*PITTGS
Trigger: TGACCCCGTGGTGATGGGCAAGACCAAAGCCGAACA...TGGCTGGCAGAGGTTTCTAGGGTGGGCCCCAGCCGTGGCGTGAACTGAGGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCGTGAAGCCGATCTGGTaGTTGACGACCACGTGCACG +
Preference number: 5 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESVKPIW*LTTTCT
Trigger: CGTGCACGTGGTCGTCAACAACCAGATCGGCTTCAC...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCACACTCGGCCGCCACTTaGCACACGTACATGACAGCC +
Preference number: 5 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAHSAAT*HTYMTA
Trigger: GGCTGTCATGTACGTGTGCAAAGTGGCGGCCGAGTG...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGTCGACAACCACGTCCTaGTGGAAGGTGCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: VNRTKTEQPVPRWWLPERSTTTS*WKVLLH
Trigger: GTGGAGGAGCACCTTCCACAAGGACGTGGTTGTCGA...CCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACATCGACAACCACGTCCTaGTGGAAGGTGCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTSTTTS*WKVLLH
Trigger: GTGGAGGAGCACCTTCCACAAGGACGTGGTTGTCGA...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACATCATACTCAGGCTGGTaGACCACACCCTGCGACACC +
Preference number: 5 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTSYSGW*TTPCDT
Trigger: GGTGTCGCAGGGTGTGGTCAACCAGCCTGAGTATGA...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp AAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTACATCTGGGTCATCGTaGCACATCTGCAAGAACCGC +
Preference number: 5 (lower is better)
Translates to: KTEQPVPRWWLPERGFLATSGSS*HICKNR
Trigger: GCGGTTCTTGCAGATGTGCAACGATGACCCAGATGT...AGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp CAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTCACGCCACACATCTGGGTCATCGTaGCACATCTGCAAGAACCGC +
Preference number: 5 (lower is better)
Translates to: QAKALSCQLPRVILSSRHTSGSS*HICKNR
Trigger: GCGGTTCTTGCAGATGTGCAACGATGACCCAGATGT...GTGGCGTGAACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCACAGGCCAGCTCAGCATaGGGGTACTTCTGCACCTCC +
Preference number: 5 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAQASSA*GYFCTS
Trigger: GGAGGTGCAGAAGTACCCCAATGCTGAGCTGGCCTG...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGTGGTCCGAAGTCTaGGCTTCACGTAGTCATAGT +
Preference number: 5 (lower is better)
Translates to: GPRQSSQCPGGGYLSGASWWSEV*ASRSHS
Trigger: ACTATGACTACGTGAAGCCAAGACTTCGGACCACCA...GGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp ATACAGGAGCCTGTGCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTCAGGTGGGTCTTCTaGTTGCCGGTGGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: IQEPVPCWVTAEASTQGPVRWVF*LPVAGA
Trigger: TGCTCCAGCCACCGGCAACAAGAAGACCCACCTGAC...TGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTGTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222673.6
CDS-3UTR CAA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGTCAGGTGGGTCTTCTaGTTGCCGGTGGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAVRWVF*LPVAGA
Trigger: TGCTCCAGCCACCGGCAACAAGAAGACCCACCTGAC...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
CDS-3UTR CAA 90 bp GCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTATCCTAGTGACTGGTGGGGAGGATaGTGGCCAGAGCTGACCCCT +
Preference number: 5 (lower is better)
Translates to: ALLGDSGSQHTRPSSYPSDWWGG*WPELTP
Trigger: AGGGGTCAGCTCTGGCCACAATCCTCCCCACCAGTC...ACTAGGATAGGAACTGGGCCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS TCA 90 bp CTCAGTGCCTTTACCTGGTGCCTCCTACACAGCCCACAGGGATGGTaGGAAACCAGGTTGGGCGCGCCCTTGGCTGTACCTGTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: LSAFTWCLLHSPQGW*ETRLGAPLAVPVWH
Trigger: ATGCCACACAGGTACAGCCAAGGGCGCGCCCAACCTGGTTTCTCACCATCCCTGTGGGCTGTGTAGGAGGCACCAGGTAAAGGCACTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497326.1
CDS CCA 90 bp TGGCAGGACATCTGGGTCATCGTTGCACATCTGCAAGAACCGCTCTaGGCGGGCGGAGGAATGTTCTGGACCCATGCCCTCCATGCCATG +
Preference number: 5 (lower is better)
Translates to: WQDIWVIVAHLQEPL*AGGGMFWTHALHAM
Trigger: CATGGCATGGAGGGCATGGGTCCAGAACATTCCTCCGCCCGCCCAGAGCGGTTCTTGCAGATGTGCAACGATGACCCAGATGTCCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGATAGCACCGAATCTGTaGAAATGTCCTAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PRQSSQCPGGGYLSGASWIAPNL*KCPSCC
Trigger: GCAGCAGCTAGGACATTTCAACAGATTCGGTGCTAT...CCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGGCAAGTGGAAGACCTaGTCGAGGTCAGACTCATCC +
Preference number: 5 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRGKWKT*SRSDSS
Trigger: GGATGAGTCTGACCTCGACAAGGTCTTCCACTTGCC...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCATCGACAACCACGTCCTaGTGGAAGGTGCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: LWGSQALEGDDSLTPMRASTTTS*WKVLLH
Trigger: GTGGAGGAGCACCTTCCACAAGGACGTGGTTGTCGA...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCGCAACAGGGATTaGGGGGTGAAGATAATTAAC +
Preference number: 5 (lower is better)
Translates to: GPRQSSQCPGGGYLSGASWRNRD*GVKIIN
Trigger: GTTAATTATCTTCACCCCCAAATCCCTGTTGCGCCA...GGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAACCATGTCGCGTGCTTaGCGCTCCCGGGTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: AVVWAALRHYSLVEKQGATMSRA*RSRVRS
Trigger: TGACCTCACCCGGGAGCGCAAAGCACGCGACATGGT...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCGCATACCAGACGGGCTaGGCGCGGCTGATGGTGGTC +
Preference number: 5 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVAYQTG*ARLMVV
Trigger: GACCACCATCAGCCGCGCCAAGCCCGTCTGGTATGC...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS GCA 90 bp CAGCTGCTCAATCCTTGTGATGGCCACCTGCCCCACCATGTCGCGTaGTTTGCGCTCCCGGGTGAGGTCATAATACACTTTGCCGGTGCA +
Preference number: 5 (lower is better)
Translates to: QLLNPCDGHLPHHVA*FALPGEVIIHFAGA
Trigger: TGCACCGGCAAAGTGTATTATGACCTCACCCGGGAGCGCAAAGCACGCGACATGGTGGGGCAGGTGGCCATCACAAGGATTGAGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp AGGGTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGGGCAAGTGGAAGACCTaGTCGAGGTCAGACTCATCC +
Preference number: 5 (lower is better)
Translates to: RVNRTKTEQPVPRWWLPEGKWKT*SRSDSS
Trigger: GGATGAGTCTGACCTCGACAAGGTCTTCCACTTGCC...CTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCATCAAGGTGGGAAGGGTaGGCCACCAAGGACAAGGTA +
Preference number: 5 (lower is better)
Translates to: LWGSQALEGDDSLTPMRASRWEG*ATKDKV
Trigger: TACCTTGTCCTTGGTGGCCAACCCTTCCCACCTTGA...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGCACGGTGCCATGAGTaGTGTAGGATGGCAGGTCGC +
Preference number: 5 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAARCHE*CRMAGR
Trigger: GCGACCTGCCATCCTACACAACTCATGGCACCGTGC...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACAGGGATGCAGGTTCTCTaGTCCACATTCTGGTCATGG +
Preference number: 5 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTGMQVL*STFWSW
Trigger: CCATGACCAGAATGTGGACAAGAGAACCTGCATCCC...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAACATCTGGGTCATCGTaGCACATCTGCAAGAACCGC +
Preference number: 5 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRTSGSS*HICKNR
Trigger: GCGGTTCTTGCAGATGTGCAACGATGACCCAGATGT...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCACAGGCCAGCTCAGCATaGGGGTACTTCTGCACCTCC +
Preference number: 5 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAQASSA*GYFCTS
Trigger: GGAGGTGCAGAAGTACCCCAATGCTGAGCTGGCCTG...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp TGCCAGGTCAGGCCAAGGCTCTCTCCTGCCAGCTGCCCCGGGTCATCCTCAGTTTGGTGGTCCGAAGTCTaGGCTTCACGTAGTCATAGT +
Preference number: 5 (lower is better)
Translates to: CQVRPRLSPASCPGSSSVWWSEV*ASRSHS
Trigger: ACTATGACTACGTGAAGCCAAGACTTCGGACCACCA...AACTGAGGATGACCCGGGGCAGCTGGCAGGAGAGAGCCTTGGCCTGACCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGCATACCAGACGGGCTaGGCGCGGCTGATGGTGGTC +
Preference number: 5 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEAYQTG*ARLMVV
Trigger: GACCACCATCAGCCGCGCCAAGCCCGTCTGGTATGC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCAGGTGGGTCTTCTTGTaGCCGGTGGCTGGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVRWVFL*PVAGAA
Trigger: GGCTGCTCCAGCCACCGGCAACAAGAAGACCCACCT...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
CDS-3UTR CAA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCAGGTGGGTCTTCTaGTTGCCGGTGGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAVRWVF*LPVAGA
Trigger: TGCTCCAGCCACCGGCAACAAGAAGACCCACCTGAC...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
CDS-3UTR CAA 90 bp ACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTACAGACTTATGTACACTTTaGGGGTTTTCCAGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: TEQPVPRWWLPERGFLATDLCTL*GFSSQA
Trigger: TGCTTGGCTGGAAAACCCCAAAAGTGTACATAAGTC...TGTAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp AGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGGGCTTCCTGGCTAGACTTATGTACACTTTaGGGGTTTTCCAGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: RQSSQCPGGGYLSGASWLDLCTL*GFSSQA
Trigger: TGCTTGGCTGGAAAACCCCAAAAGTGTACATAAGTC...TAGCCAGGAAGCCCCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp ACACTGCAGAGACTGAAGCTGCCCTTTCTGTGCCAGGTCAGGCCAAGGCTCTCTTGTTCGGCTTTGGTCTaGCCCATCACCACGGGGTCA +
Preference number: 5 (lower is better)
Translates to: TLQRLKLPFLCQVRPRLSCSALV*PITTGS
Trigger: TGACCCCGTGGTGATGGGCAAGACCAAAGCCGAACA...AGAGAGCCTTGGCCTGACCTGGCACAGAAAGGGCAGCTTCAGTCTCTGCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCATGTTCGGCTTTGGTCTaGCCCATCACCACGGGGTCA +
Preference number: 5 (lower is better)
Translates to: AVVWAALRHYSLVEKQGACSALV*PITTGS
Trigger: TGACCCCGTGGTGATGGGCAAGACCAAAGCCGAACA...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTGAAGCCGATCTGGTaGTTGACGACCACGTGCACG +
Preference number: 5 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAVKPIW*LTTTCT
Trigger: CGTGCACGTGGTCGTCAACAACCAGATCGGCTTCAC...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCCACTCGGCCGCCACTTaGCACACGTACATGACAGCC +
Preference number: 5 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVHSAAT*HTYMTA
Trigger: GGCTGTCATGTACGTGTGCAAAGTGGCGGCCGAGTG...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCATCATACTCAGGCTGGTaGACCACACCCTGCGACACC +
Preference number: 5 (lower is better)
Translates to: AVVWAALRHYSLVEKQGASYSGW*TTPCDT
Trigger: GGTGTCGCAGGGTGTGGTCAACCAGCCTGAGTATGA...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGGGATGCAGGTTCTCTaGTCCACATTCTGGTCATGG +
Preference number: 5 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAGMQVL*STFWSW
Trigger: CCATGACCAGAATGTGGACAAGAGAACCTGCATCCC...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGATGGTGGTCCGAAGTCTaGGCTTCACGTAGTCATAGT +
Preference number: 5 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRWWSEV*ASRSHS
Trigger: ACTATGACTACGTGAAGCCAAGACTTCGGACCACCA...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGTGGGTCTTCTTGTaGCCGGTGGCTGGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVERWVFL*PVAGAA
Trigger: GGCTGCTCCAGCCACCGGCAACAAGAAGACCCACCT...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
CDS GCA 90 bp GCTTCTTTAAGGTCTGGCAGGACATCTGGGTCATCGTTGCACATCTaGAAGAACCGCTCTGGGCGGGCGGAGGAATGTTCTGGACCCATG +
Preference number: 5 (lower is better)
Translates to: ASLRSGRTSGSSLHI*KNRSGRAEECSGPM
Trigger: CATGGGTCCAGAACATTCCTCCGCCCGCCCAGAGCGGTTCTTGCAGATGTGCAACGATGACCCAGATGTCCTGCCAGACCTTAAAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS GCA 90 bp GTTGGTGAGCGGAACTCCATGCTGGAACATGGGGCCTTGACGATCTaGCTTGCACGCCTCTCTCTGGGCCTTACCTTTTTCCCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: VGERNSMLEHGALTI*LARLSLGLTFFPSV
Trigger: CACTGAAGGGAAAAAGGTAAGGCCCAGAGAGAGGCGTGCAAGGCAGATCGTCAAGGCCCCATGTTCCAGCATGGAGTTCCGCTCACCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443864.6
CDS GCA 90 bp CCAGATGAGCCCAGACTCACAACTGGCACTCAAGGAGGAAACAGCTaGTCTCTCAGTGCCTTTACCTGGTGCCTCCTACACAGCCCACAG +
Preference number: 5 (lower is better)
Translates to: PDEPRLTTGTQGGNS*SLSAFTWCLLHSPQ
Trigger: CTGTGGGCTGTGTAGGAGGCACCAGGTAAAGGCACTGAGAGAGCAGCTGTTTCCTCCTTGAGTGCCAGTTGTGAGTCTGGGCTCATCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497326.1
CDS-3UTR CAA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCATAGCACCGAATCTGTaGAAATGTCCTAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESIAPNL*KCPSCC
Trigger: GCAGCAGCTAGGACATTTCAACAGATTCGGTGCTAT...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCACGAGCTTGTCCACGTaGGGCTGTGCTTCTACCAGG +
Preference number: 5 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVTSLST*GCASTR
Trigger: CCTGGTAGAAGCACAGCCCAACGTGGACAAGCTCGT...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp AGGGCAGTGGCCCAAGCAACCCTAGGCAGCATCTACGAGAAGTTCTTGAAGACGACGAGCTTGTCCACGTaGGGCTGTGCTTCTACCAGG +
Preference number: 5 (lower is better)
Translates to: RAVAQATLGSIYEKFLKTTSLST*GCASTR
Trigger: CCTGGTAGAAGCACAGCCCAACGTGGACAAGCTCGT...CGTCTTCAAGAACTTCTCGTAGATGCTGCCTAGGGTTGCTTGGGCCACTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGTGGTCCTCCACGAGCTaGTCCACGTTGGGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEWSSTS*STLGCA
Trigger: AGCACAGCCCAACGTGGACAAGCTCGTGGAGGACCA...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGGCAAGTGGAAGACCTaGTCGAGGTCAGACTCATCC +
Preference number: 5 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAGKWKT*SRSDSS
Trigger: GGATGAGTCTGACCTCGACAAGGTCTTCCACTTGCC...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGACAGCTGCCTCCAGCTTaGAATCGAATTGACAGAAGA +
Preference number: 5 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRQLPPA*NRIDRR
Trigger: TCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGCTG...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GTTAACAGGACCAAGACAGAGCAGCCAGTGCCCCGGTGGTGGCTACCTGAGCGGCAGCTGCCTCCAGCTTaGAATCGAATTGACAGAAGA +
Preference number: 5 (lower is better)
Translates to: VNRTKTEQPVPRWWLPERQLPPA*NRIDRR
Trigger: TCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGCTG...CCGCTCAGGTAGCCACCACCGGGGCACTGGCTGCTCTGTCTTGGTCCTGTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCATCAAGGTGGGAAGGGTaGGCCACCAAGGACAAGGTA +
Preference number: 5 (lower is better)
Translates to: AVVWAALRHYSLVEKQGASRWEG*ATKDKV
Trigger: TACCTTGTCCTTGGTGGCCAACCCTTCCCACCTTGA...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCTCGACAACCACGTCCTaGTGGAAGGTGCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVSTTTS*WKVLLH
Trigger: GTGGAGGAGCACCTTCCACAAGGACGTGGTTGTCGA...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGTTCTGCCGCACCCACTaGGCTTGTCCCGGGCAGATG +
Preference number: 5 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERFCRTH*ACPGQM
Trigger: CATCTGCCCGGGACAAGCCAAGTGGGTGCGGCAGAA...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGATGGCGCAACAGGGATTaGGGGGTGAAGATAATTAAC +
Preference number: 5 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRWRNRD*GVKIIN
Trigger: GTTAATTATCTTCACCCCCAAATCCCTGTTGCGCCA...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGACCATGTCGCGTGCTTaGCGCTCCCGGGTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERTMSRA*RSRVRS
Trigger: TGACCTCACCCGGGAGCGCAAAGCACGCGACATGGT...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGACCATGTCGCGTGCTTaGCGCTCCCGGGTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVTMSRA*RSRVRS
Trigger: TGACCTCACCCGGGAGCGCAAAGCACGCGACATGGT...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGCAGGCCAGCTCAGCATaGGGGTACTTCTGCACCTCC +
Preference number: 5 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEQASSA*GYFCTS
Trigger: GGAGGTGCAGAAGTACCCCAATGCTGAGCTGGCCTG...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGAGGTGGGTCTTCTTGTaGCCGGTGGCTGGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERRWVFL*PVAGAA
Trigger: GGCTGCTCCAGCCACCGGCAACAAGAAGACCCACCT...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
CDS-3UTR CAA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAATCTACGAGAAGTTCTaGAAGACGTCCAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRIYEKF*KTSRSK
Trigger: CTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGAT...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp TCATCCTCAGTTCACGCCACGGCTGGGGCCCACCCTAGAAACCTCTGCCAGCCAATCTACGAGAAGTTCTaGAAGACGTCCAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: SSSVHATAGAHPRNLCQPIYEKF*KTSRSK
Trigger: CTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGAT...TGGCTGGCAGAGGTTTCTAGGGTGGGCCCCAGCCGTGGCGTGAACTGAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGGACTGGTGGGGAGGATaGTGGCCAGAGCTGACCCCT +
Preference number: 5 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVDWWGG*WPELTP
Trigger: AGGGGTCAGCTCTGGCCACAATCCTCCCCACCAGTC...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222673.6
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAATAGCACCGAATCTGTaGAAATGTCCTAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAIAPNL*KCPSCC
Trigger: GCAGCAGCTAGGACATTTCAACAGATTCGGTGCTAT...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCGACTTATGTACACTTTaGGGGTTTTCCAGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: PVGQPSTGGGRQPNSYESDLCTL*GFSSQA
Trigger: TGCTTGGCTGGAAAACCCCAAAAGTGTACATAAGTC...GCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGACGAGCTTGTCCACGTaGGGCTGTGCTTCTACCAGG +
Preference number: 5 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVETSLST*GCASTR
Trigger: CCTGGTAGAAGCACAGCCCAACGTGGACAAGCTCGT...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGTGGTCCTCCACGAGCTaGTCCACGTTGGGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERWSSTS*STLGCA
Trigger: AGCACAGCCCAACGTGGACAAGCTCGTGGAGGACCA...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGCACTCGGCCGCCACTTaGCACACGTACATGACAGCC +
Preference number: 5 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVHSAAT*HTYMTA
Trigger: GGCTGTCATGTACGTGTGCAAAGTGGCGGCCGAGTG...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGTCGACAACCACGTCCTaGTGGAAGGTGCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVESTTTS*WKVLLH
Trigger: GTGGAGGAGCACCTTCCACAAGGACGTGGTTGTCGA...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGTCATACTCAGGCTGGTaGACCACACCCTGCGACACC +
Preference number: 5 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVESYSGW*TTPCDT
Trigger: GGTGTCGCAGGGTGTGGTCAACCAGCCTGAGTATGA...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp TCAAATACAGGAGCCTGTGCCTTGCTGGGTGACAGCGGAAGCCAGCACACAAGGGGGATGCAGGTTCTCTaGTCCACATTCTGGTCATGG +
Preference number: 5 (lower is better)
Translates to: SNTGACALLGDSGSQHTRGMQVL*STFWSW
Trigger: CCATGACCAGAATGTGGACAAGAGAACCTGCATCCC...CCTTGTGTGCTGGCTTCCGCTGTCACCCAGCAAGGCACAGGCTCCTGTATTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGGGATGCAGGTTCTCTaGTCCACATTCTGGTCATGG +
Preference number: 5 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAGMQVL*STFWSW
Trigger: CCATGACCAGAATGTGGACAAGAGAACCTGCATCCC...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAACATCTGGGTCATCGTaGCACATCTGCAAGAACCGC +
Preference number: 5 (lower is better)
Translates to: AVVWAALRHYSLVEKQGATSGSS*HICKNR
Trigger: GCGGTTCTTGCAGATGTGCAACGATGACCCAGATGT...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCATGGCGCAACAGGGATTaGGGGGTGAAGATAATTAAC +
Preference number: 5 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAWRNRD*GVKIIN
Trigger: GTTAATTATCTTCACCCCCAAATCCCTGTTGCGCCA...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGCAGGCCAGCTCAGCATaGGGGTACTTCTGCACCTCC +
Preference number: 5 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVQASSA*GYFCTS
Trigger: GGAGGTGCAGAAGTACCCCAATGCTGAGCTGGCCTG...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGCAGGCCAGCTCAGCATaGGGGTACTTCTGCACCTCC +
Preference number: 5 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERQASSA*GYFCTS
Trigger: GGAGGTGCAGAAGTACCCCAATGCTGAGCTGGCCTG...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGTCAGGTGGGTCTTCTaGTTGCCGGTGGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERVRWVF*LPVAGA
Trigger: TGCTCCAGCCACCGGCAACAAGAAGACCCACCTGAC...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
CDS-3UTR CAA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCAATCTACGAGAAGTTCTaGAAGACGTCCAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAIYEKF*KTSRSK
Trigger: CTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGAT...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCGACTGGTGGGGAGGATaGTGGCCAGAGCTGACCCCT +
Preference number: 5 (lower is better)
Translates to: PGSSTDSKAQAQDEAILVDWWGG*WPELTP
Trigger: AGGGGTCAGCTCTGGCCACAATCCTCCCCACCAGTC...GACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp GGCCTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGACATAGAACCCCACGTTaGAAGAAACAGTTACTGGAG +
Preference number: 5 (lower is better)
Translates to: GLWGSQALEGDDSLTPMRHRTPR*KKQLLE
Trigger: CTCCAGTAACTGTTTCTTCAAACGTGGGGTTCTATG...TCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449767.5
CDS-3UTR CAA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGGCAAGTGGAAGACCTaGTCGAGGTCAGACTCATCC +
Preference number: 5 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEGKWKT*SRSDSS
Trigger: GGATGAGTCTGACCTCGACAAGGTCTTCCACTTGCC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGTCAAGGTGGGAAGGGTaGGCCACCAAGGACAAGGTA +
Preference number: 5 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVESRWEG*ATKDKV
Trigger: TACCTTGTCCTTGGTGGCCAACCCTTCCCACCTTGA...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGTGTTCGGCTTTGGTCTaGCCCATCACCACGGGGTCA +
Preference number: 5 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVCSALV*PITTGS
Trigger: TGACCCCGTGGTGATGGGCAAGACCAAAGCCGAACA...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCGCACGGTGCCATGAGTaGTGTAGGATGGCAGGTCGC +
Preference number: 5 (lower is better)
Translates to: PGSSTDSKAQAQDEAILVARCHE*CRMAGR
Trigger: GCGACCTGCCATCCTACACAACTCATGGCACCGTGC...GACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGGTGAAGCCGATCTGGTaGTTGACGACCACGTGCACG +
Preference number: 5 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVVKPIW*LTTTCT
Trigger: CGTGCACGTGGTCGTCAACAACCAGATCGGCTTCAC...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GTGGCCCAAGCAACCCTAGGCAGCATCTACGAGAAGTTCTTGAAGACGTCCAGGGGGATGCAGGTTCTCTaGTCCACATTCTGGTCATGG +
Preference number: 5 (lower is better)
Translates to: VAQATLGSIYEKFLKTSRGMQVL*STFWSW
Trigger: CCATGACCAGAATGTGGACAAGAGAACCTGCATCCC...CCTGGACGTCTTCAAGAACTTCTCGTAGATGCTGCCTAGGGTTGCTTGGGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631326.2
CDS-3UTR CAA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCACATCTGGGTCATCGTaGCACATCTGCAAGAACCGC +
Preference number: 5 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVTSGSS*HICKNR
Trigger: GCGGTTCTTGCAGATGTGCAACGATGACCCAGATGT...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGGGCAAGTGGAAGACCTaGTCGAGGTCAGACTCATCC +
Preference number: 5 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVGKWKT*SRSDSS
Trigger: GGATGAGTCTGACCTCGACAAGGTCTTCCACTTGCC...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGTCAAGGTGGGAAGGGTaGGCCACCAAGGACAAGGTA +
Preference number: 5 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVSRWEG*ATKDKV
Trigger: TACCTTGTCCTTGGTGGCCAACCCTTCCCACCTTGA...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CCAGGCTCCTCTACAGATTCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCATACTCAGGCTGGTaGACCACACCCTGCGACACC +
Preference number: 5 (lower is better)
Translates to: PGSSTDSKAQAQDEAILVSYSGW*TTPCDT
Trigger: GGTGTCGCAGGGTGTGGTCAACCAGCCTGAGTATGA...GACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGAATCTGTAGAGGAGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGGGGATGCAGGTTCTCTaGTCCACATTCTGGTCATGG +
Preference number: 5 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEGMQVL*STFWSW
Trigger: CCATGACCAGAATGTGGACAAGAGAACCTGCATCCC...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCATGGCGCAACAGGGATTaGGGGGTGAAGATAATTAAC +
Preference number: 5 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAWRNRD*GVKIIN
Trigger: GTTAATTATCTTCACCCCCAAATCCCTGTTGCGCCA...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp TCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATACAGGAGCCTGTACCATGTCGCGTGCTTaGCGCTCCCGGGTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: SKAQAQDEAILVSNTGACTMSRA*RSRVRS
Trigger: TGACCTCACCCGGGAGCGCAAAGCACGCGACATGGT...ACAGGCTCCTGTATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCTGGTGGTCCGAAGTCTaGGCTTCACGTAGTCATAGT +
Preference number: 5 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVWWSEV*ASRSHS
Trigger: ACTATGACTACGTGAAGCCAAGACTTCGGACCACCA...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp TCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATACAGGAGCCTGTAGGTGGGTCTTCTTGTaGCCGGTGGCTGGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: SKAQAQDEAILVSNTGACRWVFL*PVAGAA
Trigger: GGCTGCTCCAGCCACCGGCAACAAGAAGACCCACCT...ACAGGCTCCTGTATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222673.6
CDS TCA 90 bp CAATGTGAGAATCCCCTGCAAAGCAATACACCCTCAGGTACCAGATaGGCCCAGACTCACAACTGGCACTCAAGGAGGAAACAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: QCENPLQSNTPSGTR*AQTHNWHSRRKQLL
Trigger: GAGCAGCTGTTTCCTCCTTGAGTGCCAGTTGTGAGTCTGGGCTCATCTGGTACCTGAGGGTGTATTGCTTTGCAGGGGATTCTCACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497326.1
CDS GCA 90 bp TACTTGGAAATTTCCTCCTCATACTCAGGCTGGTTGACCACACCCTaGGACACCAGCAGCTCAGCGTACTTCTGTAACACAGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: YLEISSSYSGWLTTP*DTSSSAYFCNTGFC
Trigger: GCAGAAGCCTGTGTTACAGAAGTACGCTGAGCTGCTGGTGTCGCAGGGTGTGGTCAACCAGCCTGAGTATGAGGAGGAAATTTCCAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATAGCACCGAATCTGTaGAAATGTCCTAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVIAPNL*KCPSCC
Trigger: GCAGCAGCTAGGACATTTCAACAGATTCGGTGCTAT...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCCAGCTGCCTCCAGCTTaGAATCGAATTGACAGAAGA +
Preference number: 5 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVQLPPA*NRIDRR
Trigger: TCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGCTG...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GGAGGGGGACGACAGCCTAACTCCTATGAGAGCAGAGGGAGGGGTGGTGGCACACAGATCTTATCATACTaGGAAATTTCCTCCTCATAC +
Preference number: 5 (lower is better)
Translates to: GGGRQPNSYESRGRGGGTQILSY*EISSSY
Trigger: GTATGAGGAGGAAATTTCCAAGTATGATAAGATCTG...TGTGCCACCACCCCTCCCTCTGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGACATCTGGGTCATCGTaGCACATCTGCAAGAACCGC +
Preference number: 5 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERTSGSS*HICKNR
Trigger: GCGGTTCTTGCAGATGTGCAACGATGACCCAGATGT...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCTGGCGCAACAGGGATTaGGGGGTGAAGATAATTAAC +
Preference number: 5 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVWRNRD*GVKIIN
Trigger: GTTAATTATCTTCACCCCCAAATCCCTGTTGCGCCA...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATCTACGAGAAGTTCTaGAAGACGTCCAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVIYEKF*KTSRSK
Trigger: CTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGAT...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGGTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAATTCGAAGTCGTTCCTaGAAAACTGCAAGATCCACG +
Preference number: 5 (lower is better)
Translates to: AVVWAALRHYSLVEKQGAIRSRS*KTARST
Trigger: CGTGGATCTTGCAGTTTTCAAGGAACGACTTCGAAT...TGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCACCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447398.5
CDS-3UTR CAA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCGACTTATGTACACTTTaGGGGTTTTCCAGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVDLCTL*GFSSQA
Trigger: TGCTTGGCTGGAAAACCCCAAAAGTGTACATAAGTC...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CTGTGGGGCAGCCAAGCACTGGAGGGGGACGACAGCCTAACTCCTATGAGAGCACAGATCTTATCATACTaGGAAATTTCCTCCTCATAC +
Preference number: 5 (lower is better)
Translates to: LWGSQALEGDDSLTPMRAQILSY*EISSSY
Trigger: GTATGAGGAGGAAATTTCCAAGTATGATAAGATCTG...TGCTCTCATAGGAGTTAGGCTGTCGTCCCCCTCCAGTGCTTGGCTGCCCCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGTGGTGGTCCGAAGTCTaGGCTTCACGTAGTCATAGT +
Preference number: 5 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVWWSEV*ASRSHS
Trigger: ACTATGACTACGTGAAGCCAAGACTTCGGACCACCA...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGATAGCACCGAATCTGTaGAAATGTCCTAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVIAPNL*KCPSCC
Trigger: GCAGCAGCTAGGACATTTCAACAGATTCGGTGCTAT...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGCAGCTGCCTCCAGCTTaGAATCGAATTGACAGAAGA +
Preference number: 5 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVQLPPA*NRIDRR
Trigger: TCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGCTG...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp TCTAAGGCTCAGGCTCAAGATGAAGCTATCCTAGTCTCAAATACAGGAGCCTGTTCAAGGTGGGAAGGGTaGGCCACCAAGGACAAGGTA +
Preference number: 5 (lower is better)
Translates to: SKAQAQDEAILVSNTGACSRWEG*ATKDKV
Trigger: TACCTTGTCCTTGGTGGCCAACCCTTCCCACCTTGA...ACAGGCTCCTGTATTTGAGACTAGGATAGCTTCATCTTGAGCCTGAGCCTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGATCTACGAGAAGTTCTaGAAGACGTCCAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVIYEKF*KTSRSK
Trigger: CTTCGACCTGGACGTCTTCAAGAACTTCTCGTAGAT...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGCTGCAAGATCCACGTTaGAAGAAACAGTTACTGGAG +
Preference number: 5 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVELQDPR*KKQLLE
Trigger: CTCCAGTAACTGTTTCTTCAAACGTGGATCTTGCAG...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447398.5
CDS-3UTR CAA 90 bp CACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGGCAGTGGACTTATGTACACTTTaGGGGTTTTCCAGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: HYSLVEKQGAVMGVERAVDLCTL*GFSSQA
Trigger: TGCTTGGCTGGAAAACCCCAAAAGTGTACATAAGTC...CACTGCCCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GTGACAGCGGAAGCCAGCACACAAGGCCCAGTTCCTATCCTAGTGGGTGAGACTCAGATCTTATCATACTaGGAAATTTCCTCCTCATAC +
Preference number: 5 (lower is better)
Translates to: VTAEASTQGPVPILVGETQILSY*EISSSY
Trigger: GTATGAGGAGGAAATTTCCAAGTATGATAAGATCTG...AGTCTCACCCACTAGGATAGGAACTGGGCCTTGTGTGCTGGCTTCCGCTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp GCAAAGAAAACGATGCATCAGAAAGTCTCCATTGGGTTAAAGGAGAAAGAAAGATGGTCCTCCACGAGCTaGTCCACGTTGGGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: AKKTMHQKVSIGLKEKERWSSTS*STLGCA
Trigger: AGCACAGCCCAACGTGGACAAGCTCGTGGAGGACCA...TCTTTCTTTCTCCTTTAACCCAATGGAGACTTTCTGATGCATCGTTTTCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp GTGGTGTGGGCAGCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCCAGATCTTATCATACTaGGAAATTTCCTCCTCATAC +
Preference number: 5 (lower is better)
Translates to: VVWAALRHYSLVEKQGAVQILSY*EISSSY
Trigger: GTATGAGGAGGAAATTTCCAAGTATGATAAGATCTG...GACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGCTGCCCACACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GCGCTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGATTCGAAGTCGTTCCTaGAAAACTGCAAGATCAAGT +
Preference number: 5 (lower is better)
Translates to: ALRHYSLVEKQGAVMGVEIRSRS*KTARSS
Trigger: ACTTGATCTTGCAGTTTTCAAGGAACGACTTCGAAT...CTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444676.5
CDS CCA 90 bp GTCCTAGCTGCTGCTGGTCTGTTTTGTGAAAATGTCTTAACAGTCTaGGAAGCCGTCAATGGCCTCAACTTAGCAGCACAAGTCCTTAAA +
Preference number: 5 (lower is better)
Translates to: VLAAAGLFCENVLTV*EAVNGLNLAAQVLK
Trigger: TTTAAGGACTTGTGCTGCTAAGTTGAGGCCATTGACGGCTTCCCAGACTGTTAAGACATTTTCACAAAACAGACCAGCAGCAGCTAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000222673.6
ENST00000419661.5
ENST00000439616.6
ENST00000443864.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS-3UTR CAA 90 bp GCAAAGAAAACGATGCATCAGAAAGTCTCCATTGGGTTAAAGGAGAAAGAAAGAGTGAAGCCGATCTGGTaGTTGACGACCACGTGCACG +
Preference number: 5 (lower is better)
Translates to: AKKTMHQKVSIGLKEKERVKPIW*LTTTCT
Trigger: CGTGCACGTGGTCGTCAACAACCAGATCGGCTTCAC...TCTTTCTTTCTCCTTTAACCCAATGGAGACTTTCTGATGCATCGTTTTCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222673.6
ENST00000631326.2
CDS-3UTR CAA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGACTGCAAGATCAAGTTaGTCTGTGGATGAGATAATG +
Preference number: 5 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERTARSS*SVDEIM
Trigger: CATTATCTCATCCACAGACAAACTTGATCTTGCAGT...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444676.5
CDS-3UTR CAA 90 bp CTGAGGCACTATTCTTTAGTTGAGAAGCAAGGGGCAGTCATGGGTGTGGAGAGGCAGATCTTATCATACTaGGAAATTTCCTCCTCATAC +
Preference number: 5 (lower is better)
Translates to: LRHYSLVEKQGAVMGVERQILSY*EISSSY
Trigger: GTATGAGGAGGAAATTTCCAAGTATGATAAGATCTG...CCTCTCCACACCCATGACTGCCCCTTGCTTCTCAACTAAAGAATAGTGCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS CCA 72 bp GTGGGTCTTCTTGTTGCCGGTGGCTGGAGCAGCCGCTaGGTCCCGGCCGGCATACCAGACGGGCTTGGCGCG +
Preference number: 6 (lower is better)
Translates to: VGLLVAGGWSSR*VPAGIPDGLGA
Trigger: CGCGCCAAGCCCGTCTGGTATGCCGGCCGGGACCCAGCGGCTGCTCCAGCCACCGGCAACAAGAAGACCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS CCA 72 bp GTGCCCCGCTCCACGTCCTGGCCGCTCAGCCGAATGTaGATGCCCTCCTTCAGGAGCGAGCCAAACGCCATG +
Preference number: 6 (lower is better)
Translates to: VPRSTSWPLSRM*MPSFRSEPNAM
Trigger: CATGGCGTTTGGCTCGCTCCTGAAGGAGGGCATCCACATTCGGCTGAGCGGCCAGGACGTGGAGCGGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS CCA 72 bp AAGGCCGTGTCCAGGAGGCGCTGCAGCTCCGTCAGGTaGGTCTTCTTGTTGCCGGTGGCTGGAGCAGCCGCT +
Preference number: 6 (lower is better)
Translates to: KAVSRRRCSSVR*VFLLPVAGAAA
Trigger: AGCGGCTGCTCCAGCCACCGGCAACAAGAAGACCCACCTGACGGAGCTGCAGCGCCTCCTGGACACGGCCTT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
CDS TCA 72 bp TCACAACTGCCTGTCTCCGGCTCAGCTCCACCCGAATaGGGCGCCGACACCCCACTCCGGGGCTCCAAACTC +
Preference number: 6 (lower is better)
Translates to: SQLPVSGSAPPE*GADTPLRGSKL
Trigger: GAGTTTGGAGCCCCGGAGTGGGGTGTCGGCGCCTCATTCGGGTGGAGCTGAGCCGGAGACAGGCAGTTGTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439616.6
ENST00000443864.6
ENST00000447398.5
ENST00000449767.5
CDS TCA 72 bp GGTCCCGGCCGGCATACCAGACGGGCTTGGCGCGGCTaGTGGTGGTCCGAAGTCTTGGCTTCACGTAGTCAT +
Preference number: 6 (lower is better)
Translates to: GPGRHTRRAWRG*WWSEVLASRSH
Trigger: ATGACTACGTGAAGCCAAGACTTCGGACCACCATCAGCCGCGCCAAGCCCGTCTGGTATGCCGGCCGGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS GCA 72 bp CTTGTCCACGTTGGGCTGTGCTTCTACCAGGGACTGTaGATGGGCCACAGCAGCCAGGGAGCCTCGGCTCAG +
Preference number: 6 (lower is better)
Translates to: LVHVGLCFYQGL*MGHSSQGASAQ
Trigger: CTGAGCCGAGGCTCCCTGGCTGCTGTGGCCCATGCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGACAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222673.6
ENST00000419661.5
ENST00000443864.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS GCA 72 bp CCCGCTCCACGTCCTGGCCGCTCAGCCGAATGTGGATaGCCTCCTTCAGGAGCGAGCCAAACGCCATGTACT +
Preference number: 6 (lower is better)
Translates to: PAPRPGRSAECG*PPSGASQTPCT
Trigger: AGTACATGGCGTTTGGCTCGCTCCTGAAGGAGGGCATCCACATTCGGCTGAGCGGCCAGGACGTGGAGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS GCA 72 bp AAGACGTCCAGGTCGAAGGCCGTGTCCAGGAGGCGCTaGAGCTCCGTCAGGTGGGTCTTCTTGTTGCCGGTG +
Preference number: 6 (lower is better)
Translates to: KTSRSKAVSRRR*SSVRWVFLLPV
Trigger: CACCGGCAACAAGAAGACCCACCTGACGGAGCTGCAGCGCCTCCTGGACACGGCCTTCGACCTGGACGTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
CDS GCA 72 bp AAGACGTCCAGGTCGAAGGCCGTGTCCAGGAGGCGCTaGAGCTCCGTCAGTGGGTCTTCTTGTTGCCGGTGG +
Preference number: 6 (lower is better)
Translates to: KTSRSKAVSRRR*SSVSGSSCCRW
Trigger: CCACCGGCAACAAGAAGACCCACTGACGGAGCTGCAGCGCCTCCTGGACACGGCCTTCGACCTGGACGTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631326.2
CDS GCA 72 bp CAGGTGGTCCTCCACGAGCTTGTCCACGTTGGGCTGTaGTTCTACCAGGGACTGTGCATGGGCCACAGCAGC +
Preference number: 6 (lower is better)
Translates to: QVVLHELVHVGL*FYQGLCMGHSS
Trigger: GCTGCTGTGGCCCATGCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGACAAGCTCGTGGAGGACCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222673.6
ENST00000419661.5
ENST00000443864.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS GCA 72 bp AATGGCGACAGCTGCTCAATCCTTGTGATGGCCACCTaGCCCACCATGTCGCGTGCTTTGCGCTCCCGGGTG +
Preference number: 6 (lower is better)
Translates to: NGDSCSILVMAT*PTMSRALRSRV
Trigger: CACCCGGGAGCGCAAAGCACGCGACATGGTGGGGCAGGTGGCCATCACAAGGATTGAGCAGCTGTCGCCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS CCA 72 bp GCACTGCCAGGTGGTCCTCCACGAGCTTGTCCACGTTaGGCTGTGCTTCTACCAGGGACTGTGCATGGGCCA +
Preference number: 6 (lower is better)
Translates to: ALPGGPPRACPR*AVLLPGTVHGP
Trigger: TGGCCCATGCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGACAAGCTCGTGGAGGACCACCTGGCAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222673.6
ENST00000419661.5
ENST00000443864.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS CCA 72 bp TCCCGATGTGTGTCAGAATATCCTCCGTCAGACCCGTaGAGGGGCAGGACATGCTCCTGGGCTGCCCGTCCA +
Preference number: 6 (lower is better)
Translates to: SRCVSEYPPSDP*RGRTCSWAARP
Trigger: TGGACGGGCAGCCCAGGAGCATGTCCTGCCCCTCCACGGGTCTGACGGAGGATATTCTGACACACATCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS CAA 72 bp TGCACTGCCAGGTGGTCCTCCACGAGCTTGTCCACGTaGGGCTGTGCTTCTACCAGGGACTGTGCATGGGCC +
Preference number: 6 (lower is better)
Translates to: CTARWSSTSLST*GCASTRDCAWA
Trigger: GGCCCATGCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGACAAGCTCGTGGAGGACCACCTGGCAGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222673.6
ENST00000419661.5
ENST00000443864.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS TCA 72 bp GGTCAAAGGGGAATGGCGACAGCTGCTCAATCCTTGTaGTGGCCACCTGCCCCACCATGTCGCGTGCTTTGC +
Preference number: 6 (lower is better)
Translates to: GQRGMATAAQSL*WPPAPPCRVLC
Trigger: GCAAAGCACGCGACATGGTGGGGCAGGTGGCCATCACAAGGATTGAGCAGCTGTCGCCATTCCCCTTTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS TCA 72 bp TTTACCTGGTGCCTCCTACACAGCCCACAGGGATGGTaGGAAACCAGGTTGGGCGCGCCCTTGGCTGTACCT +
Preference number: 6 (lower is better)
Translates to: FTWCLLHSPQGW*ETRLGAPLAVP
Trigger: AGGTACAGCCAAGGGCGCGCCCAACCTGGTTTCTCACCATCCCTGTGGGCTGTGTAGGAGGCACCAGGTAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497326.1
CDS CCA 72 bp ATCTGGGTCATCGTTGCACATCTGCAAGAACCGCTCTaGGCGGGCGGAGGAATGTTCTGGACCCATGCCCTC +
Preference number: 6 (lower is better)
Translates to: IWVIVAHLQEPL*AGGGMFWTHAL
Trigger: GAGGGCATGGGTCCAGAACATTCCTCCGCCCGCCCAGAGCGGTTCTTGCAGATGTGCAACGATGACCCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS CCA 72 bp GAAACCAGGTTGGGCGCGCCCTTGGCTGTACCTGTGTaGCATGCCCATGATCACGTAGTCCACGCCATTCTC +
Preference number: 6 (lower is better)
Translates to: ETRLGAPLAVPV*HAHDHVVHAIL
Trigger: GAGAATGGCGTGGACTACGTGATCATGGGCATGCCACACAGGTACAGCCAAGGGCGCGCCCAACCTGGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497326.1
CDS CAA 72 bp ATCACCACGGGGTCAGCGGCCTCAAGGTGGGAAGGGTaGGCCACCAAGGACAAGGTAATGTTCCTGTCGGTG +
Preference number: 6 (lower is better)
Translates to: ITTGSAASRWEG*ATKDKVMFLSV
Trigger: CACCGACAGGAACATTACCTTGTCCTTGGTGGCCAACCCTTCCCACCTTGAGGCCGCTGACCCCGTGGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000443864.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS CAA 72 bp TCCTTGTGGAAGGTGCTCCTCCACTCGGCCGCCACTTaGCACACGTACATGACAGCCTCGGGGTCATCTGAG +
Preference number: 6 (lower is better)
Translates to: SLWKVLLHSAAT*HTYMTASGSSE
Trigger: CTCAGATGACCCCGAGGCTGTCATGTACGTGTGCAAAGTGGCGGCCGAGTGGAGGAGCACCTTCCACAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS CAA 90 bp GTCTTGCCCATCACCACGGGGTCAGCGGCCTCAAGGTGGGAAGGGTaGGCCACCAAGGACAAGGTAATGTTCCTGTCGGTGACACGATTG +
Preference number: 6 (lower is better)
Translates to: VLPITTGSAASRWEG*ATKDKVMFLSVTRL
Trigger: CAATCGTGTCACCGACAGGAACATTACCTTGTCCTTGGTGGCCAACCCTTCCCACCTTGAGGCCGCTGACCCCGTGGTGATGGGCAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000443864.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS CAA 90 bp ACAACCACGTCCTTGTGGAAGGTGCTCCTCCACTCGGCCGCCACTTaGCACACGTACATGACAGCCTCGGGGTCATCTGAGTTCACGTGG +
Preference number: 6 (lower is better)
Translates to: TTTSLWKVLLHSAAT*HTYMTASGSSEFTW
Trigger: CCACGTGAACTCAGATGACCCCGAGGCTGTCATGTACGTGTGCAAAGTGGCGGCCGAGTGGAGGAGCACCTTCCACAAGGACGTGGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS TCA 72 bp CAATATGCTGGCAGTAGGCCATCTCCAGCCGACGGATaGTCTCCCGCAGAGGAAGTGCTGATTCCTGTCCCC +
Preference number: 6 (lower is better)
Translates to: QYAGSRPSPADG*SPAEEVLIPVP
Trigger: GGGGACAGGAATCAGCACTTCCTCTGCGGGAGATCATCCGTCGGCTGGAGATGGCCTACTGCCAGCATATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000222673.6
ENST00000443864.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000459672.5
ENST00000497326.1
ENST00000631326.2
CDS TCA 72 bp CCTGCCCCACCATGTCGCGTGCTTTGCGCTCCCGGGTaGGGTCATAATACACTTTGCCGGTGCAGAAGAGAA +
Preference number: 6 (lower is better)
Translates to: PAPPCRVLCAPG*GHNTLCRCRRE
Trigger: TTCTCTTCTGCACCGGCAAAGTGTATTATGACCTCACCCGGGAGCGCAAAGCACGCGACATGGTGGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS TCA 72 bp TTGGTGAGCGGAACTCCATGCTGGAACATGGGGCCTTaGCGATCTGCCTTGCACGCCTCTCTCTGGGCCTTA +
Preference number: 6 (lower is better)
Translates to: LVSGTPCWNMGP*RSALHASLWAL
Trigger: TAAGGCCCAGAGAGAGGCGTGCAAGGCAGATCGTCAAGGCCCCATGTTCCAGCATGGAGTTCCGCTCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443864.6
CDS GCA 72 bp AGGTCTGGCAGGACATCTGGGTCATCGTTGCACATCTaGAAGAACCGCTCTGGGCGGGCGGAGGAATGTTCT +
Preference number: 6 (lower is better)
Translates to: RSGRTSGSSLHI*KNRSGRAEECS
Trigger: AGAACATTCCTCCGCCCGCCCAGAGCGGTTCTTGCAGATGTGCAACGATGACCCAGATGTCCTGCCAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS GCA 72 bp CAAGCCCCAGCACGCCGTACTCAGACAGTGAGCTGTTaGACACAGTATAGGGGGCCTGATTGGGCCAGAGAT +
Preference number: 6 (lower is better)
Translates to: QAPARRTQTVSC*TQYRGPDWARD
Trigger: ATCTCTGGCCCAATCAGGCCCCCTATACTGTGTGCAACAGCTCACTGTCTGAGTACGGCGTGCTGGGGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631326.2
CDS CCA 72 bp GCTGGAAGTGGGTTCCTGGAAGCATCTCATCAAAGCTaGATCTGGCCTCGGGGTGGCGCAACAGGGATTTGG +
Preference number: 6 (lower is better)
Translates to: AGSGFLEASHQS*IWPRGGATGIW
Trigger: CCAAATCCCTGTTGCGCCACCCCGAGGCCAGATCCAGCTTTGATGAGATGCTTCCAGGAACCCACTTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS CAA 72 bp GCTTCTTTAAGGTCTGGCAGGACATCTGGGTCATCGTaGCACATCTGCAAGAACCGCTCTGGGCGGGCGGAG +
Preference number: 6 (lower is better)
Translates to: ASLRSGRTSGSS*HICKNRSGRAE
Trigger: CTCCGCCCGCCCAGAGCGGTTCTTGCAGATGTGCAACGATGACCCAGATGTCCTGCCAGACCTTAAAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS TCA 72 bp TGCTCCTCCACTCGGCCGCCACTTTGCACACGTACATaGCAGCCTCGGGGTCATCTGAGTTCACGTGGAAAA +
Preference number: 6 (lower is better)
Translates to: CSSTRPPLCTRT*QPRGHLSSRGK
Trigger: TTTTCCACGTGAACTCAGATGACCCCGAGGCTGTCATGTACGTGTGCAAAGTGGCGGCCGAGTGGAGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS GCA 72 bp CAAAGCCCAGCACGCCGTACTCAGACAGTGAGCTGTTaGACACAGTATAGGGGGCCTGATTGGGCCAGAGAT +
Preference number: 6 (lower is better)
Translates to: QSPARRTQTVSC*TQYRGPDWARD
Trigger: ATCTCTGGCCCAATCAGGCCCCCTATACTGTGTGCAACAGCTCACTGTCTGAGTACGGCGTGCTGGGCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
CDS GCA 72 bp CGGAACTCCATGCTGGAACATGGGGCCTTGACGATCTaGCTTGCACGCCTCTCTCTGGGCCTTACCTTTTTC +
Preference number: 6 (lower is better)
Translates to: RNSMLEHGALTI*LARLSLGLTFF
Trigger: GAAAAAGGTAAGGCCCAGAGAGAGGCGTGCAAGGCAGATCGTCAAGGCCCCATGTTCCAGCATGGAGTTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443864.6
CDS CCA 72 bp TCCCTTCAGTGTCGCCACAGTAAAACTGTTCGGCTTTaGTCTTGCCCATCACCACGGGGTCAGCGGCCTCAA +
Preference number: 6 (lower is better)
Translates to: SLQCRHSKTVRL*SCPSPRGQRPQ
Trigger: TTGAGGCCGCTGACCCCGTGGTGATGGGCAAGACCAAAGCCGAACAGTTTTACTGTGGCGACACTGAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000443864.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS CCA 72 bp GACGGGCTTGGCGCGGCTGATGGTGGTCCGAAGTCTTaGCTTCACGTAGTCATAGTAGCCTTGGTTCTTGTG +
Preference number: 6 (lower is better)
Translates to: DGLGAADGGPKS*LHVVIVALVLV
Trigger: CACAAGAACCAAGGCTACTATGACTACGTGAAGCCAAGACTTCGGACCACCATCAGCCGCGCCAAGCCCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS TCA 72 bp AAGTCTAGATGCACCCAGGGCTCTGGGTTATGTTGGTaGGCGGAACTCCATGCTGGAACATGGGGCCTTGAC +
Preference number: 6 (lower is better)
Translates to: KSRCTQGSGLCW*AELHAGTWGLD
Trigger: GTCAAGGCCCCATGTTCCAGCATGGAGTTCCGCTCACCAACATAACCCAGAGCCCTGGGTGCATCTAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443864.6
CDS GCA 72 bp AACACACCAAATCGACAACCACGTCCTTGTGGAAGGTaGTCCTCCACTCGGCCGCCACTTTGCACACGTACA +
Preference number: 6 (lower is better)
Translates to: NTPNRQPRPCGR*SSTRPPLCTRT
Trigger: TGTACGTGTGCAAAGTGGCGGCCGAGTGGAGGAGCACCTTCCACAAGGACGTGGTTGTCGATTTGGTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS GCA 72 bp AATCCTTGTGATGGCCACCTGCCCCACCATGTCGCGTaGTTTGCGCTCCCGGGTGAGGTCATAATACACTTT +
Preference number: 6 (lower is better)
Translates to: NPCDGHLPHHVA*FALPGEVIIHF
Trigger: AAAGTGTATTATGACCTCACCCGGGAGCGCAAAGCACGCGACATGGTGGGGCAGGTGGCCATCACAAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS GCA 72 bp CCCAGACTCACAACTGGCACTCAAGGAGGAAACAGCTaGTCTCTCAGTGCCTTTACCTGGTGCCTCCTACAC +
Preference number: 6 (lower is better)
Translates to: PRLTTGTQGGNS*SLSAFTWCLLH
Trigger: GTGTAGGAGGCACCAGGTAAAGGCACTGAGAGAGCAGCTGTTTCCTCCTTGAGTGCCAGTTGTGAGTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497326.1
CDS TCA 72 bp CTCATCCAGGCCATAGAACCCAAGTTTGTCTGTGGATaGGATAATGTCAGCGGGCACGGAGGAGTCCAGATC +
Preference number: 6 (lower is better)
Translates to: LIQAIEPKFVCG*DNVSGHGGVQI
Trigger: GATCTGGACTCCTCCGTGCCCGCTGACATTATCTCATCCACAGACAAACTTGGGTTCTATGGCCTGGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222673.6
ENST00000419661.5
ENST00000443864.6
ENST00000631326.2
CDS TCA 72 bp CATACTTGGAAATTTCCTCCTCATACTCAGGCTGGTTaGCCACACCCTGCGACACCAGCAGCTCAGCGTACT +
Preference number: 6 (lower is better)
Translates to: HTWKFPPHTQAG*PHPATPAAQRT
Trigger: AGTACGCTGAGCTGCTGGTGTCGCAGGGTGTGGTCAACCAGCCTGAGTATGAGGAGGAAATTTCCAAGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS GCA 72 bp ATTTCCTCCTCATACTCAGGCTGGTTGACCACACCCTaGGACACCAGCAGCTCAGCGTACTTCTGTAACACA +
Preference number: 6 (lower is better)
Translates to: ISSSYSGWLTTP*DTSSSAYFCNT
Trigger: TGTGTTACAGAAGTACGCTGAGCTGCTGGTGTCGCAGGGTGTGGTCAACCAGCCTGAGTATGAGGAGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS CAA 72 bp TCATACTTGGAAATTTCCTCCTCATACTCAGGCTGGTaGACCACACCCTGCGACACCAGCAGCTCAGCGTAC +
Preference number: 6 (lower is better)
Translates to: SYLEISSSYSGW*TTPCDTSSSAY
Trigger: GTACGCTGAGCTGCTGGTGTCGCAGGGTGTGGTCAACCAGCCTGAGTATGAGGAGGAAATTTCCAAGTATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000631326.2
CDS TCA 72 bp AATCCCCTGCAAAGCAATACACCCTCAGGTACCAGATaGGCCCAGACTCACAACTGGCACTCAAGGAGGAAA +
Preference number: 6 (lower is better)
Translates to: NPLQSNTPSGTR*AQTHNWHSRRK
Trigger: TTTCCTCCTTGAGTGCCAGTTGTGAGTCTGGGCTCATCTGGTACCTGAGGGTGTATTGCTTTGCAGGGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497326.1
CDS CAA 72 bp TCCACGCCATTCTCACTAGACTTGTCAATGATGGTCTaGAGGGCAGGGATCAGTACCTCGCAGCCTTCTAGA +
Preference number: 6 (lower is better)
Translates to: STPFSLDLSMMV*RAGISTSQPSR
Trigger: TCTAGAAGGCTGCGAGGTACTGATCCCTGCCCTCAAGACCATCATTGACAAGTCTAGTGAGAATGGCGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000222673.6
ENST00000439616.6
ENST00000443864.6
ENST00000444676.5
ENST00000447398.5
ENST00000449767.5
ENST00000459672.5
ENST00000497326.1
ENST00000631326.2
CDS TCA 72 bp AGAACCCTCCTACTGTTAGCATTCGAAGTCGTTCCTTaGAAACTGCAAGATCAAGTTTGTCTGTGGATGAGA +
Preference number: 6 (lower is better)
Translates to: RTLLLLAFEVVP*KLQDQVCLWMR
Trigger: TCTCATCCACAGACAAACTTGATCTTGCAGTTTTCAAGGAACGACTTCGAATGCTAACAGTAGGAGGGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444676.5
CDS TCA 72 bp AGAACCCTCCTACTGTTAGCATTCGAAGTCGTTCCTTaGAAACTGCAAGATCCACGTTTGAAGAAACAGTTA +
Preference number: 6 (lower is better)
Translates to: RTLLLLAFEVVP*KLQDPRLKKQL
Trigger: TAACTGTTTCTTCAAACGTGGATCTTGCAGTTTTCAAGGAACGACTTCGAATGCTAACAGTAGGAGGGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447398.5