RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OGA (Homo sapiens)

Ensembl gene IDs: ENSG00000198408

Ensembl transcript IDs: ENST00000357797.9, ENST00000361464.8, ENST00000370094.7, ENST00000429860.1, ENST00000439817.5, ENST00000461645.1, ENST00000462994.1, ENST00000479811.5, ENST00000482611.5, ENST00000492204.1, ENST00000494347.5

Found 556 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTGACCTGAGGGCAAATGGGACCAATCAGTCCCTGAACCCTACCTaGCATGTCAAATCCAACATTTCACATGCTGACCTAATATTGAGG +
Preference number: 1 (lower is better)
Translates to: TDLRANGTNQSLNPT*HVKSNISHADLILR
Trigger: CCTCAATATTAGGTCAGCATGTGAAATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGACTGATTGGTCCCATTTGCCCTCAGGTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR TCA 90 bp AACGCAACCACACTGGATGCAGAAAATAGTGCTGACTACATTTATTaGAGACTCTCTCCCTGTATAAGCCCATGTAAAAGGTCTCAGCAC +
Preference number: 1 (lower is better)
Translates to: NATTLDAENSADYIY*RLSPCISPCKRSQH
Trigger: GTGCTGAGACCTTTTACATGGGCTTATACAGGGAGAGAGTCTTCAATAAATGTAGTCAGCACTATTTTCTGCATCCAGTGTGGTTGCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR TCA 90 bp TGCCACAAACAAATGCACATTTGTCCCTACAAAGTACAACATGCCTaGACCAACAGTCATTACAGGAGACAATTGGCCACGGCTTTACAA +
Preference number: 1 (lower is better)
Translates to: CHKQMHICPYKVQHA*TNSHYRRQLATALQ
Trigger: TTGTAAAGCCGTGGCCAATTGTCTCCTGTAATGACTGTTGGTTCAGGCATGTTGTACTTTGTAGGGACAAATGTGCATTTGTTTGTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR GCA 90 bp CTTTTGCCACAAACAAATGCACATTTGTCCCTACAAAGTACAACATaGCTGAACCAACAGTCATTACAGGAGACAATTGGCCACGGCTTT +
Preference number: 1 (lower is better)
Translates to: LLPQTNAHLSLQSTT*LNQQSLQETIGHGF
Trigger: AAAGCCGTGGCCAATTGTCTCCTGTAATGACTGTTGGTTCAGGCATGTTGTACTTTGTAGGGACAAATGTGCATTTGTTTGTGGCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR CCA 90 bp ACAAAGTACAACATGCCTGAACCAACAGTCATTACAGGAGACAATTaGCCACGGCTTTACAAAAAGCAGAATAACTGCCCCAAATTGAAA +
Preference number: 1 (lower is better)
Translates to: TKYNMPEPTVITGDN*PRLYKKQNNCPKLK
Trigger: TTTCAATTTGGGGCAGTTATTCTGCTTTTTGTAAAGCCGTGGCCAATTGTCTCCTGTAATGACTGTTGGTTCAGGCATGTTGTACTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR TCA 90 bp AATAAACCAAGGAAGATGACAGATGTTATCTTGATTACTCTCAGGTaGGAAACGCAACCACACTGGATGCAGAAAATAGTGCTGACTACA +
Preference number: 1 (lower is better)
Translates to: NKPRKMTDVILITLR*ETQPHWMQKIVLTT
Trigger: TGTAGTCAGCACTATTTTCTGCATCCAGTGTGGTTGCGTTTCTCACCTGAGAGTAATCAAGATAACATCTGTCATCTTCCTTGGTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR TCA 90 bp ATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCTaGTTTGTTACCATTCTAGAGGCTGAACTGTATGAAGACCTCAAC +
Preference number: 1 (lower is better)
Translates to: MGEFYIVFFVSNPIG*FVTILEAELYEDLN
Trigger: GTTGAGGTCTTCATACAGTTCAGCCTCTAGAATGGTAACAAATCAGCCAATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
3UTR GCA 90 bp ATTTCACATGCTGACCTAATATTGAGGTTAATTTCCAGAAGTAACTaGACTTTTCAACAGATTAAGTCCTACAAAATTAGGCTCTCGTAC +
Preference number: 1 (lower is better)
Translates to: ISHADLILRLISRSN*TFQQIKSYKIRLSY
Trigger: GTACGAGAGCCTAATTTTGTAGGACTTAATCTGTTGAAAAGTGCAGTTACTTCTGGAAATTAACCTCAATATTAGGTCAGCATGTGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR-3UTR CCA 90 bp TTAAGTCCTACAAAATTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTACACAACCATCCCACTTaGAATCACTCCACCCTGACA +
Preference number: 2 (lower is better)
Translates to: LSPTKLGSRTPNGHGLRLHNHPT*NHSTLT
Trigger: TGTCAGGGTGGAGTGATTCCAAGTGGGATGGTTGTG...TAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAATTTTGTAGGACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR-3UTR TCA 90 bp TGCATACTCAAAGGCTTTGGTTGGAAGTCACTAGGTACCACTAGGTACAATGCTATTAAACAACTGACCTaGGGGCAAATGGGACCAATC +
Preference number: 2 (lower is better)
Translates to: CILKGFGWKSLGTTRYNAIKQLT*GQMGPI
Trigger: GATTGGTCCCATTTGCCCTCAGGTCAGTTGTTTAAT...AGCATTGTACCTAGTGGTACCTAGTGACTTCCAACCAAAGCCTTTGAGTATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR-3UTR TCA 90 bp AGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCGAATCCAATTGGCTaGTTTGTTACCATTCTAGAG +
Preference number: 2 (lower is better)
Translates to: SPCKRSQHLTQDSKRKPTSNPIG*FVTILE
Trigger: CTCTAGAATGGTAACAAATCAGCCAATTGGATTCGA...TGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
3UTR-3UTR TCA 90 bp AGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCAAAGTGTGATGGGTaGGTTTTACATAGTCTTCTT +
Preference number: 2 (lower is better)
Translates to: SPCKRSQHLTQDSKRKPTSKCDG*VLHSLL
Trigger: AAGAAGACTATGTAAAACTCACCCATCACACTTTGA...TGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
3UTR-3UTR TCA 90 bp TGCACATTTGTCCCTACAAAGTACAACATGCCTGAACCAACAGTCATTACAGGATATTCTTCCAACCAGTaGGTAGTCTCAAAGTGTGAT +
Preference number: 2 (lower is better)
Translates to: CTFVPTKYNMPEPTVITGYSSNQ*VVSKCD
Trigger: ATCACACTTTGAGACTACTCACTGGTTGGAAGAATA...TCCTGTAATGACTGTTGGTTCAGGCATGTTGTACTTTGTAGGGACAAATGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR-3UTR GCA 90 bp TGCATACTCAAAGGCTTTGGTTGGAAGTCACTAGGTACCACTAGGTACAATGCTCTACAAAGTACAACATaGCTGAACCAACAGTCATTA +
Preference number: 2 (lower is better)
Translates to: CILKGFGWKSLGTTRYNALQSTT*LNQQSL
Trigger: TAATGACTGTTGGTTCAGGCATGTTGTACTTTGTAG...AGCATTGTACCTAGTGGTACCTAGTGACTTCCAACCAAAGCCTTTGAGTATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR-3UTR CCA 90 bp TTAAGTCCTACAAAATTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTATGTTTCGAATCCAATTaGCTGATTTGTTACCATTCT +
Preference number: 2 (lower is better)
Translates to: LSPTKLGSRTPNGHGLRLCFESN*LICYHS
Trigger: AGAATGGTAACAAATCAGCCAATTGGATTCGAAACA...TAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAATTTTGTAGGACTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR-3UTR CCA 90 bp AAGTGGTATACAGGGTTCCATCCAGAAAGCATTCAGTCAGAGCAAGTTAAAGTCCGAATTGAAGAGACTTaGAAATGTGCCAATTCCCTA +
Preference number: 2 (lower is better)
Translates to: KWYTGFHPESIQSEQVKVRIEET*KCANSL
Trigger: TAGGGAATTGGCACATTTCCAAGTCTCTTCAATTCG...GACTTTAACTTGCTCTGACTGAATGCTTTCTGGATGGAACCCTGTATACCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
3UTR-3UTR TCA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTCGAATCCAATTGGCTaGTTTGTTACCATTCTAGAG +
Preference number: 2 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQSNPIG*FVTILE
Trigger: CTCTAGAATGGTAACAAATCAGCCAATTGGATTCGA...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
3UTR-3UTR TCA 90 bp AACCTTCTCTCCTTTCTTCTCACCTATTTAGTGCATACTCAAAGGCTTTGGTTGTATTCTTCCAACCAGTaGGTAGTCTCAAAGTGTGAT +
Preference number: 2 (lower is better)
Translates to: NLLSFLLTYLVHTQRLWLYSSNQ*VVSKCD
Trigger: ATCACACTTTGAGACTACTCACTGGTTGGAAGAATA...CAACCAAAGCCTTTGAGTATGCACTAAATAGGTGAGAAGAAAGGAGAGAAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR-3UTR TCA 90 bp AACCTTCTCTCCTTTCTTCTCACCTATTTAGTGCATACTCAAAGGCTTTGGTTGGCTGACTACATTTATTaGAGACTCTCTCCCTGTATA +
Preference number: 2 (lower is better)
Translates to: NLLSFLLTYLVHTQRLWLADYIY*RLSPCI
Trigger: TATACAGGGAGAGAGTCTTCAATAAATGTAGTCAGC...CAACCAAAGCCTTTGAGTATGCACTAAATAGGTGAGAAGAAAGGAGAGAAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR-3UTR TCA 90 bp AAGTGGTATACAGGGTTCCATCCAGAAAGCATTCAGTCAGAGCAAGTTAAAGTCTTAAGATACTTATGCTaGATTAGCCCAAGGGAGAAA +
Preference number: 2 (lower is better)
Translates to: KWYTGFHPESIQSEQVKVLRYLC*ISPREK
Trigger: TTTCTCCCTTGGGCTAATTCAGCATAAGTATCTTAA...GACTTTAACTTGCTCTGACTGAATGCTTTCTGGATGGAACCCTGTATACCACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
3UTR-3UTR CCA 90 bp AACCTTCTCTCCTTTCTTCTCACCTATTTAGTGCATACTCAAAGGCTTTGGTTGATTACAGGAGACAATTaGCCACGGCTTTACAAAAAG +
Preference number: 2 (lower is better)
Translates to: NLLSFLLTYLVHTQRLWLITGDN*PRLYKK
Trigger: CTTTTTGTAAAGCCGTGGCCAATTGTCTCCTGTAAT...CAACCAAAGCCTTTGAGTATGCACTAAATAGGTGAGAAGAAAGGAGAGAAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR CAA 90 bp TACAAGTTTGTCAATTGTAGGCTTTTGCCACAAACAAATGCACATTaGTCCCTACAAAGTACAACATGCCTGAACCAACAGTCATTACAG +
Preference number: 2 (lower is better)
Translates to: YKFVNCRLLPQTNAH*SLQSTTCLNQQSLQ
Trigger: CTGTAATGACTGTTGGTTCAGGCATGTTGTACTTTGTAGGGACAAATGTGCATTTGTTTGTGGCAAAAGCCTACAATTGACAAACTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR-3UTR GCA 90 bp CTTTTTATTCTAAGCTCACGGTGTTTCAGATATCTATTTCACAACCAAGACCATAGAGAAACTTGGCCATaGTGGTGCTTTTTACCAAGT +
Preference number: 2 (lower is better)
Translates to: LFILSSRCFRYLFHNQDHRETWP*WCFLPS
Trigger: ACTTGGTAAAAAGCACCAGCATGGCCAAGTTTCTCT...ATGGTCTTGGTTGTGAAATAGATATCTGAAACACCGTGAGCTTAGAATAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370094.7
3UTR-3UTR CCA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGTTTCGAATCCAATTaGCTGATTTGTTACCATTCT +
Preference number: 2 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQCFESN*LICYHS
Trigger: AGAATGGTAACAAATCAGCCAATTGGATTCGAAACA...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
3UTR-3UTR CCA 90 bp ATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTTGTTTCGAATCCAATTaGCTGATTTGTTACCATTCT +
Preference number: 2 (lower is better)
Translates to: ISLSYRICCNTIFFQPVSCFESN*LICYHS
Trigger: AGAATGGTAACAAATCAGCCAATTGGATTCGAAACA...ACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
3UTR CCA 72 bp AATAGCCTTACACTAAAGCTCGCATGCGCACAGGGCTaGGAGGATGGCTTCCTCTTGCCAGGCCCTTTAGGT +
Preference number: 3 (lower is better)
Translates to: NSLTLKLACAQG*EDGFLLPGPLG
Trigger: ACCTAAAGGGCCTGGCAAGAGGAAGCCATCCTCCCAGCCCTGTGCGCATGCGAGCTTTAGTGTAAGGCTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
3UTR-3UTR CAA 90 bp CACCAGAATAGCCTTACACTAAAGCTCGCATGCGCACAGGGCTGGGAGGATGGCAACCTAGGCAACGAATaGAAGAGACTTGGAAATGTG +
Preference number: 3 (lower is better)
Translates to: HQNSLTLKLACAQGWEDGNLGNE*KRLGNV
Trigger: CACATTTCCAAGTCTCTTCAATTCGTTGCCTAGGTT...GCCATCCTCCCAGCCCTGTGCGCATGCGAGCTTTAGTGTAAGGCTATTCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
3UTR TCA 72 bp AGGGCAAATGGGACCAATCAGTCCCTGAACCCTACCTaGCATGTCAAATCCAACATTTCACATGCTGACCTA +
Preference number: 3 (lower is better)
Translates to: RANGTNQSLNPT*HVKSNISHADL
Trigger: TAGGTCAGCATGTGAAATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGACTGATTGGTCCCATTTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR-3UTR CAA 90 bp GACAATTGGCCACGGCTTTACAAAAAGCAGAATAACTGCCCCAAATTGAAATTACCACAACCATCCCACTaGGAATCACTCCACCCTGAC +
Preference number: 3 (lower is better)
Translates to: DNWPRLYKKQNNCPKLKLPQPSH*ESLHPD
Trigger: GTCAGGGTGGAGTGATTCCAAGTGGGATGGTTGTGG...TAATTTCAATTTGGGGCAGTTATTCTGCTTTTTGTAAAGCCGTGGCCAATTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR CCA 72 bp AACATGCCTGAACCAACAGTCATTACAGGAGACAATTaGCCACGGCTTTACAAAAAGCAGAATAACTGCCCC +
Preference number: 3 (lower is better)
Translates to: NMPEPTVITGDN*PRLYKKQNNCP
Trigger: GGGGCAGTTATTCTGCTTTTTGTAAAGCCGTGGCCAATTGTCTCCTGTAATGACTGTTGGTTCAGGCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR TCA 72 bp CAAATGCACATTTGTCCCTACAAAGTACAACATGCCTaGACCAACAGTCATTACAGGAGACAATTGGCCACG +
Preference number: 3 (lower is better)
Translates to: QMHICPYKVQHA*TNSHYRRQLAT
Trigger: CGTGGCCAATTGTCTCCTGTAATGACTGTTGGTTCAGGCATGTTGTACTTTGTAGGGACAAATGTGCATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR-3UTR CAA 90 bp TGCATACTCAAAGGCTTTGGTTGGAAGTCACTAGGTACCACTAGGTACAATGCTGCAGTTAAGAGACTTTaGGACAGTTCACAGTGTCAA +
Preference number: 3 (lower is better)
Translates to: CILKGFGWKSLGTTRYNAAVKRL*DSSQCQ
Trigger: TTGACACTGTGAACTGTCCAAAAGTCTCTTAACTGC...AGCATTGTACCTAGTGGTACCTAGTGACTTCCAACCAAAGCCTTTGAGTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR TCA 72 bp AGGAAGATGACAGATGTTATCTTGATTACTCTCAGGTaGGAAACGCAACCACACTGGATGCAGAAAATAGTG +
Preference number: 3 (lower is better)
Translates to: RKMTDVILITLR*ETQPHWMQKIV
Trigger: CACTATTTTCTGCATCCAGTGTGGTTGCGTTTCTCACCTGAGAGTAATCAAGATAACATCTGTCATCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR GCA 72 bp CAAACAAATGCACATTTGTCCCTACAAAGTACAACATaGCTGAACCAACAGTCATTACAGGAGACAATTGGC +
Preference number: 3 (lower is better)
Translates to: QTNAHLSLQSTT*LNQQSLQETIG
Trigger: GCCAATTGTCTCCTGTAATGACTGTTGGTTCAGGCATGTTGTACTTTGTAGGGACAAATGTGCATTTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR-3UTR CAA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGGCAGTTAAGAGACTTTaGGACAGTTCACAGTGTCAA +
Preference number: 3 (lower is better)
Translates to: HLSFIQDLLQYYILPTSEAVKRL*DSSQCQ
Trigger: TTGACACTGTGAACTGTCCAAAAGTCTCTTAACTGC...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
3UTR-3UTR CAA 90 bp GACAATTGGCCACGGCTTTACAAAAAGCAGAATAACTGCCCCAAATTGAAATTAGCAGTTAAGAGACTTTaGGACAGTTCACAGTGTCAA +
Preference number: 3 (lower is better)
Translates to: DNWPRLYKKQNNCPKLKLAVKRL*DSSQCQ
Trigger: TTGACACTGTGAACTGTCCAAAAGTCTCTTAACTGC...TAATTTCAATTTGGGGCAGTTATTCTGCTTTTTGTAAAGCCGTGGCCAATTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR TCA 72 bp ACACTGGATGCAGAAAATAGTGCTGACTACATTTATTaGAGACTCTCTCCCTGTATAAGCCCATGTAAAAGG +
Preference number: 3 (lower is better)
Translates to: TLDAENSADYIY*RLSPCISPCKR
Trigger: CCTTTTACATGGGCTTATACAGGGAGAGAGTCTTCAATAAATGTAGTCAGCACTATTTTCTGCATCCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR GCA 72 bp TATGAAAACTATGACATGTCAGTCAGCCTTGCTGCCTaGTGTGTGCTGTATATAAGTCCATTACATATTCCT +
Preference number: 3 (lower is better)
Translates to: YENYDMSVSLAA*CVLYISPLHIP
Trigger: AGGAATATGTAATGGACTTATATACAGCACACAGCAGGCAGCAAGGCTGACTGACATGTCATAGTTTTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
3UTR-3UTR CAA 90 bp CAACCACACTGGATGCAGAAAATAGTGCTGACTACATTTATTGAAGACTCTCTCTTGTTTCGAATCCAATaGGCTGATTTGTTACCATTC +
Preference number: 3 (lower is better)
Translates to: QPHWMQKIVLTTFIEDSLLFRIQ*ADLLPF
Trigger: GAATGGTAACAAATCAGCCAATTGGATTCGAAACAA...GAGAGAGTCTTCAATAAATGTAGTCAGCACTATTTTCTGCATCCAGTGTGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
3UTR-3UTR CAA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACTTGTTTCGAATCCAATaGGCTGATTTGTTACCATTC +
Preference number: 3 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNLFRIQ*ADLLPF
Trigger: GAATGGTAACAAATCAGCCAATTGGATTCGAAACAA...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
3UTR TCA 72 bp TTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCTaGTTTGTTACCATTCTAGAGGCTGAACTGTATGAA +
Preference number: 3 (lower is better)
Translates to: FYIVFFVSNPIG*FVTILEAELYE
Trigger: TTCATACAGTTCAGCCTCTAGAATGGTAACAAATCAGCCAATTGGATTCGAAACAAAGAAGACTATGTAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
3UTR GCA 72 bp GCTGACCTAATATTGAGGTTAATTTCCAGAAGTAACTaGACTTTTCAACAGATTAAGTCCTACAAAATTAGG +
Preference number: 3 (lower is better)
Translates to: ADLILRLISRSN*TFQQIKSYKIR
Trigger: CCTAATTTTGTAGGACTTAATCTGTTGAAAAGTGCAGTTACTTCTGGAAATTAACCTCAATATTAGGTCAGC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCACTTTTCCGGGTGCCGGAGCTaGCGGCGGCTCCAGCGATGC +
Preference number: 4 (lower is better)
Translates to: LGSRTPNGHGLRLGGRHFSGCRS*RRLQRC
Trigger: GCATCGCTGGAGCCGCCGGCAGCTCCGGCACCCGGA...AAAGTGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp CACCAGAATAGCCTTACACTAAAGCTCGCATGCGCACAGGGCTGGGAGGATGGCCGGCAGGGTTGGAGCTaGGCTCGCTCTCCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: HQNSLTLKLACAQGWEDGRQGWS*ARSPAP
Trigger: AGGAGCGGGAGAGCGAGCTCAGCTCCAACCCTGCCG...GCCATCCTCCCAGCCCTGTGCGCATGCGAGCTTTAGTGTAAGGCTATTCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp CACCAGAATAGCCTTACACTAAAGCTCGCATGCGCACAGGGCTGGGAGGATGGCGGCCGCTGCCACCTCTaGGGGTCCTCCTCGACCTCT +
Preference number: 4 (lower is better)
Translates to: HQNSLTLKLACAQGWEDGGRCHL*GSSSTS
Trigger: AGAGGTCGAGGAGGACCCGCAGAGGTGGCAGCGGCC...GCCATCCTCCCAGCCCTGTGCGCATGCGAGCTTTAGTGTAAGGCTATTCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp TTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCACTTTGTTGTCTTCTCCGGGTaGCGGAGCTGCCGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: LGSRTPNGHGLRLGGRHFVVFSG*RSCRRL
Trigger: GAGCCGCCGGCAGCTCCGGCACCCGGAGAAGACAAC...AAAGTGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp AAAATTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCATCGACCTCTGTCCGTTaGGGCACCGGCCCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: KIRLSYPKWSWPTPRWEASTSVR*GTGPEP
Trigger: GGGCTCCGGGCCGGTGCCCCAACGGACAGAGGTCGA...TGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp AAAATTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCAGAGCTCTCCCTCTGCTaGTGCCTCCACCGCCCGCTT +
Preference number: 4 (lower is better)
Translates to: KIRLSYPKWSWPTPRWEAELSLC*CLHRPL
Trigger: AAGCGGGCGGTGGAGGCAGCAGCAGAGGGAGAGCTC...TGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TTAAGTCCTACAAAATTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTATCGACCTCTGTCCGTTaGGGCACCGGCCCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LSPTKLGSRTPNGHGLRLSTSVR*GTGPEP
Trigger: GGGCTCCGGGCCGGTGCCCCAACGGACAGAGGTCGA...TAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAATTTTGTAGGACTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp GACCAATCAGTCCCTGAACCCTACCTGACATGTCAAATCCAACATTTCACATGCCCGCAGGGACCCGAATaGCCGGATGAGAAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: DQSVPEPYLTCQIQHFTCPQGPE*PDEKGG
Trigger: GCCGCCCTTCTCATCCGGGCATTCGGGTCCCTGCGG...GCATGTGAAATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGACTGATTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp AGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACAGGCCGCTGCCACCTCTaGGGGTCCTCCTCGACCTCT +
Preference number: 4 (lower is better)
Translates to: SPCKRSQHLTQDSKRKPTGRCHL*GSSSTS
Trigger: AGAGGTCGAGGAGGACCCGCAGAGGTGGCAGCGGCC...TGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp AGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTGCACCATCCTCCTaGCCCCGGCCGCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: SPCKRSQHLTQDSKRKPTSAPSS*PRPLPP
Trigger: AGGTGGCAGCGGCCGGGGGCAGGAGGATGGTGCAGA...TGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TCAACTACCATTCACAAGGTGCAGTTAAGAGACTTTTGGACAGTTCACAGTGTCACCCGAATGCCCGGATaGGAAGGGCGGCGGCACCGG +
Preference number: 4 (lower is better)
Translates to: STTIHKVQLRDFWTVHSVTRMPG*EGRRHR
Trigger: CCGGTGCCGCCGCCCTTCTCATCCGGGCATTCGGGT...GACACTGTGAACTGTCCAAAAGTCTCTTAACTGCACCTTGTGAATGGTAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp ATAAGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCCGGCAGGGTTGGAGCTaGGCTCGCTCTCCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: ISPCKRSQHLTQDSKRKPRQGWS*ARSPAP
Trigger: AGGAGCGGGAGAGCGAGCTCAGCTCCAACCCTGCCG...GGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TGCATACTCAAAGGCTTTGGTTGGAAGTCACTAGGTACCACTAGGTACAATGCTCGGCAGGGTTGGAGCTaGGCTCGCTCTCCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: CILKGFGWKSLGTTRYNARQGWS*ARSPAP
Trigger: AGGAGCGGGAGAGCGAGCTCAGCTCCAACCCTGCCG...AGCATTGTACCTAGTGGTACCTAGTGACTTCCAACCAAAGCCTTTGAGTATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp GTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTCATACCCGCAGGGACCCGAATaGCCGGATGAGAAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: VSAPNTRLKKEAHISLSYPQGPE*PDEKGG
Trigger: GCCGCCCTTCTCATCCGGGCATTCGGGTCCCTGCGG...GTATGAAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TGCATACTCAAAGGCTTTGGTTGGAAGTCACTAGGTACCACTAGGTACAATGCTGTTGTCTTCTCCGGGTaGCGGAGCTGCCGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: CILKGFGWKSLGTTRYNAVVFSG*RSCRRL
Trigger: GAGCCGCCGGCAGCTCCGGCACCCGGAGAAGACAAC...AGCATTGTACCTAGTGGTACCTAGTGACTTCCAACCAAAGCCTTTGAGTATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCACTTTGTCCTGCCGACTATCTaGCAGCTTCATGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: LGSRTPNGHGLRLGGRHFVLPTI*QLHAQN
Trigger: GTTCTGAGCATGAAGCTGGCAGATAGTCGGCAGGAC...AAAGTGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTTCGACCTCTGTCCGTTaGGGCACCGGCCCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFSTSVR*GTGPEP
Trigger: GGGCTCCGGGCCGGTGCCCCAACGGACAGAGGTCGA...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTGGCCGCTGCCACCTCTaGGGGTCCTCCTCGACCTCT +
Preference number: 4 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFGRCHL*GSSSTS
Trigger: AGAGGTCGAGGAGGACCCGCAGAGGTGGCAGCGGCC...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACTCCGGGTGCCGGAGCTaGCGGCGGCTCCAGCGATGC +
Preference number: 4 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNSGCRS*RRLQRC
Trigger: GCATCGCTGGAGCCGCCGGCAGCTCCGGCACCCGGA...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCACTTTCACAACCATCCCACTTaGAATCACTCCACCCTGACA +
Preference number: 4 (lower is better)
Translates to: LGSRTPNGHGLRLGGRHFHNHPT*NHSTLT
Trigger: TGTCAGGGTGGAGTGATTCCAAGTGGGATGGTTGTG...AAAGTGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGCGGCAGGGTTGGAGCTaGGCTCGCTCTCCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQRQGWS*ARSPAP
Trigger: AGGAGCGGGAGAGCGAGCTCAGCTCCAACCCTGCCG...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TTATTTATTCAGCTTAAACTAATGCCACAACCATCCCACTTGGAATCACTCCACCCCGAGCTCTCCCTCTaGTGCTGCCTCCACCGCCCG +
Preference number: 4 (lower is better)
Translates to: LFIQLKLMPQPSHLESLHPELSL*CCLHRP
Trigger: CGGGCGGTGGAGGCAGCAGCAGAGGGAGAGCTCGGG...GTGGAGTGATTCCAAGTGGGATGGTTGTGGCATTAGTTTAAGCTGAATAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp CCAAATCAGATAAAAGTGGTATACAGGGTTCCATCCAGAAAGCATTCAGTCAGAGTTGTCTTCTCCGGGTaGCGGAGCTGCCGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: PNQIKVVYRVPSRKHSVRVVFSG*RSCRRL
Trigger: GAGCCGCCGGCAGCTCCGGCACCCGGAGAAGACAAC...TCTGACTGAATGCTTTCTGGATGGAACCCTGTATACCACTTTTATCTGATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CCA 90 bp GGAGTCACATTTCATAGTGTCTCATCTCCAAATCAGATAAAAGTGGTATACAGGTCGACCTCTGTCCGTTaGGGCACCGGCCCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GVTFHSVSSPNQIKVVYRSTSVR*GTGPEP
Trigger: GGGCTCCGGGCCGGTGCCCCAACGGACAGAGGTCGA...CCTGTATACCACTTTTATCTGATTTGGAGATGAGACACTATGAAATGTGACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR TCA 90 bp TGCACATTTGTCCCTACAAAGTACAACATGCCTGAACCAACAGTCATTACAGGACGGAGAGCGAGGCTGTaGCCTCTCGTTCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CTFVPTKYNMPEPTVITGRRARL*PLVPWK
Trigger: CTTCCAGGGAACGAGAGGTCACAGCCTCGCTCTCCG...TCCTGTAATGACTGTTGGTTCAGGCATGTTGTACTTTGTAGGGACAAATGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCACTTTAAACTTGGCTGCTCGTaGCCGCCATTCTTCAATTTT +
Preference number: 4 (lower is better)
Translates to: LGSRTPNGHGLRLGGRHFKLGCS*PPFFNF
Trigger: AAAATTGAAGAATGGCGGTCACGAGCAGCCAAGTTT...AAAGTGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCACTTTTCCCTGAACCCTACCTaGCATGTCAAATCCAACATT +
Preference number: 4 (lower is better)
Translates to: LGSRTPNGHGLRLGGRHFSLNPT*HVKSNI
Trigger: AATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGA...AAAGTGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACGGCCGCTGCCACCTCTaGGGGTCCTCCTCGACCTCT +
Preference number: 4 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNGRCHL*GSSSTS
Trigger: AGAGGTCGAGGAGGACCCGCAGAGGTGGCAGCGGCC...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp GGAGTCACATTTCATAGTGTCTCATCTCCAAATCAGATAAAAGTGGTATACAGGTCTGCACCATCCTCCTaGCCCCGGCCGCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: GVTFHSVSSPNQIKVVYRSAPSS*PRPLPP
Trigger: AGGTGGCAGCGGCCGGGGGCAGGAGGATGGTGCAGA...CCTGTATACCACTTTTATCTGATTTGGAGATGAGACACTATGAAATGTGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp CAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCTCTGCACCATCCTCCTaGCCCCGGCCGCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: QSVMGEFYIVFFVSNPIGSAPSS*PRPLPP
Trigger: AGGTGGCAGCGGCCGGGGGCAGGAGGATGGTGCAGA...GCCAATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TCTCAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTTCCGGGTGCCGGAGCTaGCGGCGGCTCCAGCGATGC +
Preference number: 4 (lower is better)
Translates to: SQSVMGEFYIVFFVSNPISGCRS*RRLQRC
Trigger: GCATCGCTGGAGCCGCCGGCAGCTCCGGCACCCGGA...AATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp CTTTTTATTCTAAGCTCACGGTGTTTCAGATATCTATTTCACAACCAAGACCATTCCGGGTGCCGGAGCTaGCGGCGGCTCCAGCGATGC +
Preference number: 4 (lower is better)
Translates to: LFILSSRCFRYLFHNQDHSGCRS*RRLQRC
Trigger: GCATCGCTGGAGCCGCCGGCAGCTCCGGCACCCGGA...ATGGTCTTGGTTGTGAAATAGATATCTGAAACACCGTGAGCTTAGAATAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACGTTGTCTTCTCCGGGTaGCGGAGCTGCCGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNVVFSG*RSCRRL
Trigger: GAGCCGCCGGCAGCTCCGGCACCCGGAGAAGACAAC...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGTCTCATGCCTCGGCTTTAAGCTaGGGCGCCAGAAGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: QDTASSRKLVESHFIVSHASALS*GARSLS
Trigger: GCTTAGGCTTCTGGCGCCCCAGCTTAAAGCCGAGGC...ATGAGACACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CCA 90 bp TTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCACTTTAAGCCATCATGCTTTTaGCCACACTTGGGTCAGTTA +
Preference number: 4 (lower is better)
Translates to: LGSRTPNGHGLRLGGRHFKPSCF*PHLGQL
Trigger: TAACTGACCCAAGTGTGGCCAAAAGCATGATGGCTT...AAAGTGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp AATGAAATGAAGTCCCTAGAGAAACTTGGCCATGCTGGTGCTTTTTACCAAGTTCGGAGAGCGAGGCTGTaGCCTCTCGTTCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: NEMKSLEKLGHAGAFYQVRRARL*PLVPWK
Trigger: CTTCCAGGGAACGAGAGGTCACAGCCTCGCTCTCCG...AACTTGGTAAAAAGCACCAGCATGGCCAAGTTTCTCTAGGGACTTCATTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR TCA 90 bp TTAAGTCCTACAAAATTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTATCCTCCAACGTCGCTTaGCTCTCCTTCTGCACCATC +
Preference number: 4 (lower is better)
Translates to: LSPTKLGSRTPNGHGLRLSSNVA*LSFCTI
Trigger: GATGGTGCAGAAGGAGAGTCAAGCGACGTTGGAGGA...TAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAATTTTGTAGGACTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp AAAATTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCAGATCTGCACCCAAACTaGGAAACCTGGTCCAATTTA +
Preference number: 4 (lower is better)
Translates to: KIRLSYPKWSWPTPRWEADLHPN*ETWSNL
Trigger: TAAATTGGACCAGGTTTCTCAGTTTGGGTGCAGATC...TGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACGAGCTCTCCCTCTGCTaGTGCCTCCACCGCCCGCTT +
Preference number: 4 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNELSLC*CLHRPL
Trigger: AAGCGGGCGGTGGAGGCAGCAGCAGAGGGAGAGCTC...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TCTCAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTCCCGAGCTCTCCCTCTaGTGCTGCCTCCACCGCCCG +
Preference number: 4 (lower is better)
Translates to: SQSVMGEFYIVFFVSNPIPELSL*CCLHRP
Trigger: CGGGCGGTGGAGGCAGCAGCAGAGGGAGAGCTCGGG...AATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp AAGTGGTATACAGGGTTCCATCCAGAAAGCATTCAGTCAGAGCAAGTTAAAGTCCCTGTCCTCGTTCTCTaGCTCTGCTGCCCTCCCGAT +
Preference number: 4 (lower is better)
Translates to: KWYTGFHPESIQSEQVKVPVLVL*LCCPPD
Trigger: ATCGGGAGGGCAGCAGAGGCAGAGAACGAGGACAGG...GACTTTAACTTGCTCTGACTGAATGCTTTCTGGATGGAACCCTGTATACCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CCA 90 bp TGCACATTTGTCCCTACAAAGTACAACATGCCTGAACCAACAGTCATTACAGGAGCCTCGGCTTTAAGCTaGGGCGCCAGAAGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: CTFVPTKYNMPEPTVITGASALS*GARSLS
Trigger: GCTTAGGCTTCTGGCGCCCCAGCTTAAAGCCGAGGC...TCCTGTAATGACTGTTGGTTCAGGCATGTTGTACTTTGTAGGGACAAATGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGACCGGCCCGGAGCCCTaGAGAGGGCTTCAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVTGPEP*RGLQLQ
Trigger: TTGGAGCTGAAGCCCTCTCCAGGGCTCCGGGCCGGT...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCACTTTCTTTTCATTTGGACCTaGCACAAACTGCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: LGSRTPNGHGLRLGGRHFLFIWT*HKLLLV
Trigger: AACAAGGAGCAGTTTGTGCCAGGTCCAAATGAAAAG...AAAGTGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCACTTTTCTCAAAGCCCACAATaGTGGAGTTCTGTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: LGSRTPNGHGLRLGGRHFSQSPQ*WSSVKE
Trigger: TTCTTTCACAGAACTCCACCATTGTGGGCTTTGAGA...AAAGTGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCGGAGAGCGAGGCTGTaGCCTCTCGTTCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNRRARL*PLVPWK
Trigger: CTTCCAGGGAACGAGAGGTCACAGCCTCGCTCTCCG...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGCGGAGAGCGAGGCTGTaGCCTCTCGTTCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: HLSFIQDLLQYYILPTSERRARL*PLVPWK
Trigger: CTTCCAGGGAACGAGAGGTCACAGCCTCGCTCTCCG...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp ATAAGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCTCCTCCAACGTCGCTTaGCTCTCCTTCTGCACCATC +
Preference number: 4 (lower is better)
Translates to: ISPCKRSQHLTQDSKRKPSSNVA*LSFCTI
Trigger: GATGGTGCAGAAGGAGAGTCAAGCGACGTTGGAGGA...GGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCACTTTGTGAGATCGCATAGATaGACTCTATCTCATATTCTC +
Preference number: 4 (lower is better)
Translates to: LGSRTPNGHGLRLGGRHFVRSHR*TLSHIL
Trigger: GAGAATATGAGATAGAGTTCATCTATGCGATCTCAC...AAAGTGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCACTTTTATTCTTCCAACCAGTaGGTAGTCTCAAAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: LGSRTPNGHGLRLGGRHFYSSNQ*VVSKCD
Trigger: ATCACACTTTGAGACTACTCACTGGTTGGAAGAATA...AAAGTGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp GACCAATCAGTCCCTGAACCCTACCTGACATGTCAAATCCAACATTTCACATGCGGACCAATCAGTCCCTaGACCCTACCTGACATGTCA +
Preference number: 4 (lower is better)
Translates to: DQSVPEPYLTCQIQHFTCGPISP*TLPDMS
Trigger: TGACATGTCAGGTAGGGTTCAGGGACTGATTGGTCC...GCATGTGAAATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGACTGATTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp AAAATTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCAGTTTTCTACAGGAACTaGGCTCTGATCCAAACAATC +
Preference number: 4 (lower is better)
Translates to: KIRLSYPKWSWPTPRWEAVFYRN*ALIQTI
Trigger: GATTGTTTGGATCAGAGCTCAGTTCCTGTAGAAAAC...TGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TCTCAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTCCGCAGGGACCCGAATaGCCGGATGAGAAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: SQSVMGEFYIVFFVSNPIPQGPE*PDEKGG
Trigger: GCCGCCCTTCTCATCCGGGCATTCGGGTCCCTGCGG...AATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp CTTTTTATTCTAAGCTCACGGTGTTTCAGATATCTATTTCACAACCAAGACCATCCGCAGGGACCCGAATaGCCGGATGAGAAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LFILSSRCFRYLFHNQDHPQGPE*PDEKGG
Trigger: GCCGCCCTTCTCATCCGGGCATTCGGGTCCCTGCGG...ATGGTCTTGGTTGTGAAATAGATATCTGAAACACCGTGAGCTTAGAATAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp ATAAGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCCTCACCACTCAAGGCTaGTCCCTGGCTCATAATGGG +
Preference number: 4 (lower is better)
Translates to: ISPCKRSQHLTQDSKRKPLTTQG*SLAHNG
Trigger: CCCATTATGAGCCAGGGAGCAGCCTTGAGTGGTGAG...GGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp CAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGTCTCATCTCACCACTCAAGGCTaGTCCCTGGCTCATAATGGG +
Preference number: 4 (lower is better)
Translates to: QDTASSRKLVESHFIVSHLTTQG*SLAHNG
Trigger: CCCATTATGAGCCAGGGAGCAGCCTTGAGTGGTGAG...ATGAGACACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp CACCAGAATAGCCTTACACTAAAGCTCGCATGCGCACAGGGCTGGGAGGATGGCGACAACACTACTATTTaGTCGAAGCCATTGAAATTC +
Preference number: 4 (lower is better)
Translates to: HQNSLTLKLACAQGWEDGDNTTI*SKPLKF
Trigger: GAATTTCAATGGCTTCGAGCAAATAGTAGTGTTGTC...GCCATCCTCCCAGCCCTGTGCGCATGCGAGCTTTAGTGTAAGGCTATTCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp TTAAGTCCTACAAAATTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGTCCTGCCGACTATCTaGCAGCTTCATGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: LSPTKLGSRTPNGHGLRLVLPTI*QLHAQN
Trigger: GTTCTGAGCATGAAGCTGGCAGATAGTCGGCAGGAC...TAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAATTTTGTAGGACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TTAAGTCCTACAAAATTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAATCCTCCAGGGTCACTaGTTCCGCAGTGTACAAAGG +
Preference number: 4 (lower is better)
Translates to: LSPTKLGSRTPNGHGLRLILQGH*FRSVQR
Trigger: CCTTTGTACACTGCGGAACCAGTGACCCTGGAGGAT...TAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAATTTTGTAGGACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp AAAATTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCATTCCTTGTCACCATTTaGCTTGGTATACTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KIRLSYPKWSWPTPRWEAFLVTI*LGILLL
Trigger: CAGGAGAAGTATACCAAGCCAAATGGTGACAAGGAA...TGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TGCATACTCAAAGGCTTTGGTTGGAAGTCACTAGGTACCACTAGGTACAATGCTCTCTCGTACCCCAAATaGTCATGGCCTACGCCTAGG +
Preference number: 4 (lower is better)
Translates to: CILKGFGWKSLGTTRYNALSYPK*SWPTPR
Trigger: CCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAG...AGCATTGTACCTAGTGGTACCTAGTGACTTCCAACCAAAGCCTTTGAGTATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp GTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTCATACGTCAGTGGAGGTGGCTaGAACTCTCCTGCTAGACCA +
Preference number: 4 (lower is better)
Translates to: VSAPNTRLKKEAHISLSYVSGGG*NSPARP
Trigger: TGGTCTAGCAGGAGAGTTCCAGCCACCTCCACTGAC...GTATGAAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357797.9
CDS-3UTR CCA 90 bp CCAAATCAGATAAAAGTGGTATACAGGGTTCCATCCAGAAAGCATTCAGTCAGAGCATGCGCACAGGGCTaGGAGGATGGCTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PNQIKVVYRVPSRKHSVRACAQG*EDGFLL
Trigger: CAAGAGGAAGCCATCCTCCCAGCCCTGTGCGCATGC...TCTGACTGAATGCTTTCTGGATGGAACCCTGTATACCACTTTTATCTGATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp CAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCCCTGTCCTCGTTCTCTaGCTCTGCTGCCCTCCCGAT +
Preference number: 4 (lower is better)
Translates to: QSVMGEFYIVFFVSNPIGPVLVL*LCCPPD
Trigger: ATCGGGAGGGCAGCAGAGGCAGAGAACGAGGACAGG...GCCAATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp AAAATTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCACGTCATACATTTCTCTaGAAATCTTGTACACGGATG +
Preference number: 4 (lower is better)
Translates to: KIRLSYPKWSWPTPRWEARHTFL*KSCTRM
Trigger: CATCCGTGTACAAGATTTGCAGAGAAATGTATGACG...TGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCACTTTTTACATTATTCAAAGTaGCATTCTGAACCAACACCC +
Preference number: 4 (lower is better)
Translates to: LGSRTPNGHGLRLGGRHFLHYSK*HSEPTP
Trigger: GGGTGTTGGTTCAGAATGGCACTTTGAATAATGTAA...AAAGTGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGGCCTCGGCTTTAAGCTaGGGCGCCAGAAGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVASALS*GARSLS
Trigger: GCTTAGGCTTCTGGCGCCCCAGCTTAAAGCCGAGGC...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CACCAGAATAGCCTTACACTAAAGCTCGCATGCGCACAGGGCTGGGAGGATGGCTTCGATGGACTCTACTaGAATTTCTTTAGAAACAAC +
Preference number: 4 (lower is better)
Translates to: HQNSLTLKLACAQGWEDGFDGLY*NFFRNN
Trigger: GTTGTTTCTAAAGAAATTCCAGTAGAGTCCATCGAA...GCCATCCTCCCAGCCCTGTGCGCATGCGAGCTTTAGTGTAAGGCTATTCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR TCA 90 bp GACCAATCAGTCCCTGAACCCTACCTGACATGTCAAATCCAACATTTCACATGCCTCAGCTTCCTCCACTaGATACATCTCTCGCCAAAA +
Preference number: 4 (lower is better)
Translates to: DQSVPEPYLTCQIQHFTCLSFLH*IHLSPK
Trigger: TTTTGGCGAGAGATGTATTCAGTGGAGGAAGCTGAG...GCATGTGAAATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGACTGATTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp AAAATTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCAATTTCACTCAGTATTTaGTTGTCATTCTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: KIRLSYPKWSWPTPRWEAISLSI*LSFLWS
Trigger: GGACCACAAGAATGACAATCAAATACTGAGTGAAAT...TGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp GACCAATCAGTCCCTGAACCCTACCTGACATGTCAAATCCAACATTTCACATGCTTGATTACTCTCAGGTaGGAAACGCAACCACACTGG +
Preference number: 4 (lower is better)
Translates to: DQSVPEPYLTCQIQHFTCLITLR*ETQPHW
Trigger: CCAGTGTGGTTGCGTTTCTCACCTGAGAGTAATCAA...GCATGTGAAATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGACTGATTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TCAACTACCATTCACAAGGTGCAGTTAAGAGACTTTTGGACAGTTCACAGTGTCGGACCAATCAGTCCCTaGACCCTACCTGACATGTCA +
Preference number: 4 (lower is better)
Translates to: STTIHKVQLRDFWTVHSVGPISP*TLPDMS
Trigger: TGACATGTCAGGTAGGGTTCAGGGACTGATTGGTCC...GACACTGTGAACTGTCCAAAAGTCTCTTAACTGCACCTTGTGAATGGTAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp ATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTCCTGTCCTCGTTCTCTaGCTCTGCTGCCCTCCCGAT +
Preference number: 4 (lower is better)
Translates to: ISLSYRICCNTIFFQPVSPVLVL*LCCPPD
Trigger: ATCGGGAGGGCAGCAGAGGCAGAGAACGAGGACAGG...ACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCACTTTATTTTGATTCAGCTATaGTCTCTTTATCAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LGSRTPNGHGLRLGGRHFILIQL*SLYQCP
Trigger: TGGACACTGATAAAGAGAGCATAGCTGAATCAAAAT...AAAGTGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp GACCAATCAGTCCCTGAACCCTACCTGACATGTCAAATCCAACATTTCACATGCGGACCTGGCACAAACTaGTCCTTGTTTGTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: DQSVPEPYLTCQIQHFTCGPGTN*SLFVCS
Trigger: TGAACAGACAAACAAGGAGCAGTTTGTGCCAGGTCC...GCATGTGAAATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGACTGATTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TTAAGTCCTACAAAATTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAACATCTGTGCTCCTTTaGGTCCATGCTCGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: LSPTKLGSRTPNGHGLRLTSVLL*VHARKE
Trigger: TTCCTTACGAGCATGGACCCAAAGGAGCACAGATGT...TAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAATTTTGTAGGACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCGGAGGTAGGAGTCAGTaGAGGTGGCTGGAACTCTCC +
Preference number: 4 (lower is better)
Translates to: QSVMGEFYIVFFVSNPIGGGRSQ*RWLELS
Trigger: GGAGAGTTCCAGCCACCTCCACTGACTCCTACCTCC...GCCAATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357797.9
CDS-3UTR TCA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTCCTCCAACGTCGCTTaGCTCTCCTTCTGCACCATC +
Preference number: 4 (lower is better)
Translates to: HLSFIQDLLQYYILPTSESSNVA*LSFCTI
Trigger: GATGGTGCAGAAGGAGAGTCAAGCGACGTTGGAGGA...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp GACCAATCAGTCCCTGAACCCTACCTGACATGTCAAATCCAACATTTCACATGCGATATCCAATCCAGGTaGGATCGCATAGATGAACTC +
Preference number: 4 (lower is better)
Translates to: DQSVPEPYLTCQIQHFTCDIQSR*DRIDEL
Trigger: GAGTTCATCTATGCGATCTCACCTGGATTGGATATC...GCATGTGAAATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGACTGATTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp ACTACTATGAAAACTATGACATGTCAGTCAGCCTTGCTGCCTGCTGTGTGCTGTGATATCCAATCCAGGTaGGATCGCATAGATGAACTC +
Preference number: 4 (lower is better)
Translates to: TTMKTMTCQSALLPAVCCDIQSR*DRIDEL
Trigger: GAGTTCATCTATGCGATCTCACCTGGATTGGATATC...ACAGCACACAGCAGGCAGCAAGGCTGACTGACATGTCATAGTTTTCATAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR TCA 90 bp AGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACAGATATCCAATCCAGGTaGGATCGCATAGATGAACTC +
Preference number: 4 (lower is better)
Translates to: SPCKRSQHLTQDSKRKPTDIQSR*DRIDEL
Trigger: GAGTTCATCTATGCGATCTCACCTGGATTGGATATC...TGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp AGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACACTTTTAACCGTGGGATaGGTTCTGTGGATCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SPCKRSQHLTQDSKRKPTLLTVG*VLWIFL
Trigger: AAGGAAGATCCACAGAACTCATCCCACGGTTAAAAG...TGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp GACCAATCAGTCCCTGAACCCTACCTGACATGTCAAATCCAACATTTCACATGCCACTCCATTCATGTTTaGTTTGTACCAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: DQSVPEPYLTCQIQHFTCHSIHV*FVPGGK
Trigger: CTTGCCACCTGGTACAAATCAAACATGAATGGAGTG...GCATGTGAAATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGACTGATTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp GTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTCATACAATTGGAGAGCCGAGTaGACATTCCCATCACTAGTC +
Preference number: 4 (lower is better)
Translates to: VSAPNTRLKKEAHISLSYNWRAE*TFPSLV
Trigger: GACTAGTGATGGGAATGTTCACTCGGCTCTCCAATT...GTATGAAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGAGCAGTAATCCAGGCTaGGGGAAAGCAGCCCTCCTA +
Preference number: 4 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVSSNPG*GKAALL
Trigger: TAGGAGGGCTGCTTTCCCTCAGCCTGGATTACTGCT...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGGTTCTCTGCCTCTGCTaGCCTCCCGATAATCTTAGG +
Preference number: 4 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQVLCLC*PPDNLR
Trigger: CCTAAGATTATCGGGAGGGCAGCAGAGGCAGAGAAC...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TCTCAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTCCTGTCCTCGTTCTCTaGCTCTGCTGCCCTCCCGAT +
Preference number: 4 (lower is better)
Translates to: SQSVMGEFYIVFFVSNPIPVLVL*LCCPPD
Trigger: ATCGGGAGGGCAGCAGAGGCAGAGAACGAGGACAGG...AATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp ATAAGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCCCCATCAACTACACTTaGTTTAGCTCCACTGTGTGC +
Preference number: 4 (lower is better)
Translates to: ISPCKRSQHLTQDSKRKPPINYT*FSSTVC
Trigger: GCACACAGTGGAGCTAAAGCAAGTGTAGTTGATGGG...GGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCTTAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TTATTTATTCAGCTTAAACTAATGCCACAACCATCCCACTTGGAATCACTCCACCTCACCACTCAAGGCTaGTCCCTGGCTCATAATGGG +
Preference number: 4 (lower is better)
Translates to: LFIQLKLMPQPSHLESLHLTTQG*SLAHNG
Trigger: CCCATTATGAGCCAGGGAGCAGCCTTGAGTGGTGAG...GTGGAGTGATTCCAAGTGGGATGGTTGTGGCATTAGTTTAAGCTGAATAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp GACCAATCAGTCCCTGAACCCTACCTGACATGTCAAATCCAACATTTCACATGCGTCTGTTCATCAGTTTaGATGGGGGCAATGTCACTA +
Preference number: 4 (lower is better)
Translates to: DQSVPEPYLTCQIQHFTCVCSSV*MGAMSL
Trigger: TAGTGACATTGCCCCCATGCAAACTGATGAACAGAC...GCATGTGAAATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGACTGATTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGGGAGGCAAGCCATCATaGTTTTGGCCACACTTGGGT +
Preference number: 4 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQGGKPS*FWPHLG
Trigger: ACCCAAGTGTGGCCAAAAGCATGATGGCTTGCCTCC...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TCTCAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGCCTCGGCTTTAAGCTaGGGCGCCAGAAGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: SQSVMGEFYIVFFVSNPIASALS*GARSLS
Trigger: GCTTAGGCTTCTGGCGCCCCAGCTTAAAGCCGAGGC...AATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TGTTATCAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGCCACCACCATGTCCATaGGTTCTTCATCAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: CYQDTASSRKLVESHFIVPPPCP*VLHQAV
Trigger: AACAGCCTGATGAAGAACCCATGGACATGGTGGTGG...CACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTGATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CCA 90 bp AATGAAATGAAGTCCCTAGAGAAACTTGGCCATGCTGGTGCTTTTTACCAAGTTATCCTCCAGGGTCACTaGTTCCGCAGTGTACAAAGG +
Preference number: 4 (lower is better)
Translates to: NEMKSLEKLGHAGAFYQVILQGH*FRSVQR
Trigger: CCTTTGTACACTGCGGAACCAGTGACCCTGGAGGAT...AACTTGGTAAAAAGCACCAGCATGGCCAAGTTTCTCTAGGGACTTCATTTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CCA 90 bp AACCTTCTCTCCTTTCTTCTCACCTATTTAGTGCATACTCAAAGGCTTTGGTTGATCCTCCAGGGTCACTaGTTCCGCAGTGTACAAAGG +
Preference number: 4 (lower is better)
Translates to: NLLSFLLTYLVHTQRLWLILQGH*FRSVQR
Trigger: CCTTTGTACACTGCGGAACCAGTGACCCTGGAGGAT...CAACCAAAGCCTTTGAGTATGCACTAAATAGGTGAGAAGAAAGGAGAGAAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp GTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTCATACACATCTCTTCAAACTTaGCTGCTCGTGACCGCCATT +
Preference number: 4 (lower is better)
Translates to: VSAPNTRLKKEAHISLSYTSLQT*LLVTAI
Trigger: AATGGCGGTCACGAGCAGCCAAGTTTGAAGAGATGT...GTATGAAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGTCTCATACATCTCTTCAAACTTaGCTGCTCGTGACCGCCATT +
Preference number: 4 (lower is better)
Translates to: QDTASSRKLVESHFIVSHTSLQT*LLVTAI
Trigger: AATGGCGGTCACGAGCAGCCAAGTTTGAAGAGATGT...ATGAGACACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CCA 90 bp AGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACAAAAGAATTGTCCTGTTaGCACAATTGGAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SPCKRSQHLTQDSKRKPTKELSC*HNWRAE
Trigger: CTCGGCTCTCCAATTGTGCCAACAGGACAATTCTTT...TGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TGCACATTTGTCCCTACAAAGTACAACATGCCTGAACCAACAGTCATTACAGGACACAACCATCCCACTTaGAATCACTCCACCCTGACA +
Preference number: 4 (lower is better)
Translates to: CTFVPTKYNMPEPTVITGHNHPT*NHSTLT
Trigger: TGTCAGGGTGGAGTGATTCCAAGTGGGATGGTTGTG...TCCTGTAATGACTGTTGGTTCAGGCATGTTGTACTTTGTAGGGACAAATGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACTACCCCAAATGGTCATaGCCTACGCCTAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNYPKWS*PTPRWE
Trigger: CTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTA...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp CAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGTCTCATCTTTTAACCGTGGGATaGGTTCTGTGGATCTTCCTT +
Preference number: 4 (lower is better)
Translates to: QDTASSRKLVESHFIVSHLLTVG*VLWIFL
Trigger: AAGGAAGATCCACAGAACTCATCCCACGGTTAAAAG...ATGAGACACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR TCA 90 bp GTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTCATACCTTTTAACCGTGGGATaGGTTCTGTGGATCTTCCTT +
Preference number: 4 (lower is better)
Translates to: VSAPNTRLKKEAHISLSYLLTVG*VLWIFL
Trigger: AAGGAAGATCCACAGAACTCATCCCACGGTTAAAAG...GTATGAAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp GTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTCATACCACTCCATTCATGTTTaGTTTGTACCAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: VSAPNTRLKKEAHISLSYHSIHV*FVPGGK
Trigger: CTTGCCACCTGGTACAAATCAAACATGAATGGAGTG...GTATGAAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TTAAGTCCTACAAAATTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTACATCTCTGGGGATTTTaGTTCAGCTATGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LSPTKLGSRTPNGHGLRLHLWGF*FSYALF
Trigger: AAAGAGAGCATAGCTGAATCAAAATCCCCAGAGATG...TAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAATTTTGTAGGACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp ATAAGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCAAACTTGGCTGCTCGTaGCCGCCATTCTTCAATTTT +
Preference number: 4 (lower is better)
Translates to: ISPCKRSQHLTQDSKRKPKLGCS*PPFFNF
Trigger: AAAATTGAAGAATGGCGGTCACGAGCAGCCAAGTTT...GGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTAATTGGAGAGCCGAGTaGACATTCCCATCACTAGTC +
Preference number: 4 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFNWRAE*TFPSLV
Trigger: GACTAGTGATGGGAATGTTCACTCGGCTCTCCAATT...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp ATAAGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCAATTGTGCTGAAGAATaGCTACGACACCCTAACCAC +
Preference number: 4 (lower is better)
Translates to: ISPCKRSQHLTQDSKRKPNCAEE*LRHPNH
Trigger: GTGGTTAGGGTGTCGTAGTCATTCTTCAGCACAATT...GGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp ATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGCAGTAATCCAGGCTaGGGGAAAGCAGCCCTCCTA +
Preference number: 4 (lower is better)
Translates to: ISLSYRICCNTIFFQPVSSSNPG*GKAALL
Trigger: TAGGAGGGCTGCTTTCCCTCAGCCTGGATTACTGCT...ACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp AGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACAAAAGTACAACATGCCTaGACCAACAGTCATTACAGG +
Preference number: 4 (lower is better)
Translates to: SPCKRSQHLTQDSKRKPTKVQHA*TNSHYR
Trigger: CCTGTAATGACTGTTGGTTCAGGCATGTTGTACTTT...TGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TGCATACTCAAAGGCTTTGGTTGGAAGTCACTAGGTACCACTAGGTACAATGCTTCCCTGAACCCTACCTaGCATGTCAAATCCAACATT +
Preference number: 4 (lower is better)
Translates to: CILKGFGWKSLGTTRYNASLNPT*HVKSNI
Trigger: AATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGA...AGCATTGTACCTAGTGGTACCTAGTGACTTCCAACCAAAGCCTTTGAGTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp ATAAGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCTTGAGATTAAACAACTaGCCTGAGGGCAAATGGGAC +
Preference number: 4 (lower is better)
Translates to: ISPCKRSQHLTQDSKRKPLRLNN*PEGKWD
Trigger: GTCCCATTTGCCCTCAGGTCAGTTGTTTAATCTCAA...GGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACGGAGGCAAGCCATCATaGTTTTGGCCACACTTGGGT +
Preference number: 4 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNGGKPS*FWPHLG
Trigger: ACCCAAGTGTGGCCAAAAGCATGATGGCTTGCCTCC...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TGCATACTCAAAGGCTTTGGTTGGAAGTCACTAGGTACCACTAGGTACAATGCTTTTAGCTCCACTGTGTaGAACTTGCCTACTCATCAC +
Preference number: 4 (lower is better)
Translates to: CILKGFGWKSLGTTRYNAFSSTV*NLPTHH
Trigger: GTGATGAGTAGGCAAGTTGCACACAGTGGAGCTAAA...AGCATTGTACCTAGTGGTACCTAGTGACTTCCAACCAAAGCCTTTGAGTATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439817.5
CDS-3UTR GCA 90 bp ACTACTATGAAAACTATGACATGTCAGTCAGCCTTGCTGCCTGCTGTGTGCTGTAGAGATTATTCCTGGTaGACCTACCTAACCACTGTA +
Preference number: 4 (lower is better)
Translates to: TTMKTMTCQSALLPAVCCRDYSW*TYLTTV
Trigger: TACAGTGGTTAGGTAGGTGCACCAGGAATAATCTCT...ACAGCACACAGCAGGCAGCAAGGCTGACTGACATGTCATAGTTTTCATAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp GGAGTCACATTTCATAGTGTCTCATCTCCAAATCAGATAAAAGTGGTATACAGGCATGTCAGTCAGCCTTaGTGCCTGCTGTGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: GVTFHSVSSPNQIKVVYRHVSQP*CLLCAV
Trigger: TACAGCACACAGCAGGCAGCAAGGCTGACTGACATG...CCTGTATACCACTTTTATCTGATTTGGAGATGAGACACTATGAAATGTGACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CCA 90 bp TTAAGTCCTACAAAATTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTATGCCACAGTATTCTGTaGGACAGAAGAGGAAAGTTT +
Preference number: 4 (lower is better)
Translates to: LSPTKLGSRTPNGHGLRLCHSIL*DRRGKF
Trigger: AAACTTTCCTCTTCTGTCCCACAGAATACTGTGGCA...TAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAATTTTGTAGGACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp AGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATTGTTACTACGGTTGTaGCATTTAAAGAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SPCKRSQHLTQDSKRKPTLLLRL*HLKRVL
Trigger: CAGCACCCTCTTTAAATGCCACAACCGTAGTAACAA...TGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TATCAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGTCTACATCTGTGCTCCTTTaGGTCCATGCTCGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: YQDTASSRKLVESHFIVSTSVLL*VHARKE
Trigger: TTCCTTACGAGCATGGACCCAAAGGAGCACAGATGT...AGACACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CCA 90 bp TCAACTACCATTCACAAGGTGCAGTTAAGAGACTTTTGGACAGTTCACAGTGTCACATCTCTTCAAACTTaGCTGCTCGTGACCGCCATT +
Preference number: 4 (lower is better)
Translates to: STTIHKVQLRDFWTVHSVTSLQT*LLVTAI
Trigger: AATGGCGGTCACGAGCAGCCAAGTTTGAAGAGATGT...GACACTGTGAACTGTCCAAAAGTCTCTTAACTGCACCTTGTGAATGGTAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTACATCTCTTCAAACTTaGCTGCTCGTGACCGCCATT +
Preference number: 4 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFTSLQT*LLVTAI
Trigger: AATGGCGGTCACGAGCAGCCAAGTTTGAAGAGATGT...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TGCACATTTGTCCCTACAAAGTACAACATGCCTGAACCAACAGTCATTACAGGAATTTGCCCCATCAATTaGCAGCAAACGCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: CTFVPTKYNMPEPTVITGICPIN*QQTLEL
Trigger: GAGTTCCAGCGTTTGCTGCCAATTGATGGGGCAAAT...TCCTGTAATGACTGTTGGTTCAGGCATGTTGTACTTTGTAGGGACAAATGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TCAACTACCATTCACAAGGTGCAGTTAAGAGACTTTTGGACAGTTCACAGTGTCATTTGCCCCATCAATTaGCAGCAAACGCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: STTIHKVQLRDFWTVHSVICPIN*QQTLEL
Trigger: GAGTTCCAGCGTTTGCTGCCAATTGATGGGGCAAAT...GACACTGTGAACTGTCCAAAAGTCTCTTAACTGCACCTTGTGAATGGTAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp AGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATTCCTTGTCACCATTTaGCTTGGTATACTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SPCKRSQHLTQDSKRKPTFLVTI*LGILLL
Trigger: CAGGAGAAGTATACCAAGCCAAATGGTGACAAGGAA...TGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp GTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTCATACAAGCCATCATGCTTTTaGCCACACTTGGGTCAGTTA +
Preference number: 4 (lower is better)
Translates to: VSAPNTRLKKEAHISLSYKPSCF*PHLGQL
Trigger: TAACTGACCCAAGTGTGGCCAAAAGCATGATGGCTT...GTATGAAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp GTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTCATACGAAACGCAACCACACTaGATGCAGAAAATAGTGCTG +
Preference number: 4 (lower is better)
Translates to: VSAPNTRLKKEAHISLSYETQPH*MQKIVL
Trigger: CAGCACTATTTTCTGCATCCAGTGTGGTTGCGTTTC...GTATGAAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp ATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTCTCTCGTACCCCAAATaGTCATGGCCTACGCCTAGG +
Preference number: 4 (lower is better)
Translates to: ISLSYRICCNTIFFQPVSLSYPK*SWPTPR
Trigger: CCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAG...ACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp CTTTTTATTCTAAGCTCACGGTGTTTCAGATATCTATTTCACAACCAAGACCATTCCTCCAACGTCGCTTaGCTCTCCTTCTGCACCATC +
Preference number: 4 (lower is better)
Translates to: LFILSSRCFRYLFHNQDHSSNVA*LSFCTI
Trigger: GATGGTGCAGAAGGAGAGTCAAGCGACGTTGGAGGA...ATGGTCTTGGTTGTGAAATAGATATCTGAAACACCGTGAGCTTAGAATAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR TCA 90 bp GACCAATCAGTCCCTGAACCCTACCTGACATGTCAAATCCAACATTTCACATGCAAAAAGCAAAGCAAATaGTCTGCACCCAAACTGAGA +
Preference number: 4 (lower is better)
Translates to: DQSVPEPYLTCQIQHFTCKKQSK*SAPKLR
Trigger: TCTCAGTTTGGGTGCAGATCATTTGCTTTGCTTTTT...GCATGTGAAATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGACTGATTGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TGCATACTCAAAGGCTTTGGTTGGAAGTCACTAGGTACCACTAGGTACAATGCTCATCTCTGGGGATTTTaGTTCAGCTATGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: CILKGFGWKSLGTTRYNAHLWGF*FSYALF
Trigger: AAAGAGAGCATAGCTGAATCAAAATCCCCAGAGATG...AGCATTGTACCTAGTGGTACCTAGTGACTTCCAACCAAAGCCTTTGAGTATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp ATAAGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCTTTGCTCGAAGCCATTaGAATTCCCGTAACATCTGT +
Preference number: 4 (lower is better)
Translates to: ISPCKRSQHLTQDSKRKPFARSH*NSRNIC
Trigger: ACAGATGTTACGGGAATTTCAATGGCTTCGAGCAAA...GGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp CAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGTCTCATTTTGCTCGAAGCCATTaGAATTCCCGTAACATCTGT +
Preference number: 4 (lower is better)
Translates to: QDTASSRKLVESHFIVSHFARSH*NSRNIC
Trigger: ACAGATGTTACGGGAATTTCAATGGCTTCGAGCAAA...ATGAGACACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR TCA 90 bp TCTCAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTAGCAGTAATCCAGGCTaGGGGAAAGCAGCCCTCCTA +
Preference number: 4 (lower is better)
Translates to: SQSVMGEFYIVFFVSNPISSNPG*GKAALL
Trigger: TAGGAGGGCTGCTTTCCCTCAGCCTGGATTACTGCT...AATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp AGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATATTCTTCCAACCAGTaGGTAGTCTCAAAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: SPCKRSQHLTQDSKRKPTYSSNQ*VVSKCD
Trigger: ATCACACTTTGAGACTACTCACTGGTTGGAAGAATA...TGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TTAAGTCCTACAAAATTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTATATTCTTCCAACCAGTaGGTAGTCTCAAAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: LSPTKLGSRTPNGHGLRLYSSNQ*VVSKCD
Trigger: ATCACACTTTGAGACTACTCACTGGTTGGAAGAATA...TAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAATTTTGTAGGACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp AGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACAGCTGACTACATTTATTaGAGACTCTCTCCCTGTATA +
Preference number: 4 (lower is better)
Translates to: SPCKRSQHLTQDSKRKPTADYIY*RLSPCI
Trigger: TATACAGGGAGAGAGTCTTCAATAAATGTAGTCAGC...TGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp CAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGTCTCATTTGGATAACAGAAAGTaGCACAGTATTCTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: QDTASSRKLVESHFIVSHLDNRK*HSILWD
Trigger: GTCCCACAGAATACTGTGGCACTTTCTGTTATCCAA...ATGAGACACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp TCAACTACCATTCACAAGGTGCAGTTAAGAGACTTTTGGACAGTTCACAGTGTCTTTAGCTCCACTGTGTaGAACTTGCCTACTGCTGTA +
Preference number: 4 (lower is better)
Translates to: STTIHKVQLRDFWTVHSVFSSTV*NLPTAV
Trigger: TACAGCAGTAGGCAAGTTGCACACAGTGGAGCTAAA...GACACTGTGAACTGTCCAAAAGTCTCTTAACTGCACCTTGTGAATGGTAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361464.8
CDS-3UTR GCA 90 bp CCAAATCAGATAAAAGTGGTATACAGGGTTCCATCCAGAAAGCATTCAGTCAGACCCATCAACTACACTTaGTTTAGCTCCACTGTGTGC +
Preference number: 4 (lower is better)
Translates to: PNQIKVVYRVPSRKHSVRPINYT*FSSTVC
Trigger: GCACACAGTGGAGCTAAAGCAAGTGTAGTTGATGGG...TCTGACTGAATGCTTTCTGGATGGAACCCTGTATACCACTTTTATCTGATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp TATCAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGTCTAGATCAGCAAGTAACTaGAAATCCTCCAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: YQDTASSRKLVESHFIVSRSASN*KSSRVT
Trigger: AGTGACCCTGGAGGATTTGCAGTTACTTGCTGATCT...AGACACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp GACCAATCAGTCCCTGAACCCTACCTGACATGTCAAATCCAACATTTCACATGCAGGCATAACCACATATaGCATCTTCATCTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: DQSVPEPYLTCQIQHFTCRHNHI*HLHLLG
Trigger: TCCTAGAAGATGAAGATGGCATATGTGGTTATGCCT...GCATGTGAAATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGACTGATTGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCCCACCACCATGTCCATaGGTTCTTCATCAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: QSVMGEFYIVFFVSNPIGPPPCP*VLHQAV
Trigger: AACAGCCTGATGAAGAACCCATGGACATGGTGGTGG...GCCAATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGCCACCACCATGTCCATaGGTTCTTCATCAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVPPPCP*VLHQAV
Trigger: AACAGCCTGATGAAGAACCCATGGACATGGTGGTGG...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp GACCAATCAGTCCCTGAACCCTACCTGACATGTCAAATCCAACATTTCACATGCTACAATCTTCTTGCATaGACATCTCTGGGGATTTTG +
Preference number: 4 (lower is better)
Translates to: DQSVPEPYLTCQIQHFTCYNLLA*TSLGIL
Trigger: CAAAATCCCCAGAGATGTCCATGCAAGAAGATTGTA...GCATGTGAAATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGACTGATTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGACATCTGTGCTCCTTTaGGTCCATGCTCGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQTSVLL*VHARKE
Trigger: TTCCTTACGAGCATGGACCCAAAGGAGCACAGATGT...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TGTTATCAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGAAAGAATTGTCCTGTTaGCACAATTGGAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: CYQDTASSRKLVESHFIVKELSC*HNWRAE
Trigger: CTCGGCTCTCCAATTGTGCCAACAGGACAATTCTTT...CACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTGATAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CCA 90 bp GACAATTGGCCACGGCTTTACAAAAAGCAGAATAACTGCCCCAAATTGAAATTAATTGGCAGCAAACGCTaGAACTCTCCTGCTAGACCA +
Preference number: 4 (lower is better)
Translates to: DNWPRLYKKQNNCPKLKLIGSKR*NSPARP
Trigger: TGGTCTAGCAGGAGAGTTCCAGCGTTTGCTGCCAAT...TAATTTCAATTTGGGGCAGTTATTCTGCTTTTTGTAAAGCCGTGGCCAATTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGATTGGCAGCAAACGCTaGAACTCTCCTGCTAGACCA +
Preference number: 4 (lower is better)
Translates to: HLSFIQDLLQYYILPTSEIGSKR*NSPARP
Trigger: TGGTCTAGCAGGAGAGTTCCAGCGTTTGCTGCCAAT...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp GTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTCATACTTCCTTGTCACCATTTaGCTTGGTATACTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: VSAPNTRLKKEAHISLSYFLVTI*LGILLL
Trigger: CAGGAGAAGTATACCAAGCCAAATGGTGACAAGGAA...GTATGAAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TCTCAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTTACCCCAAATGGTCATaGCCTACGCCTAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SQSVMGEFYIVFFVSNPIYPKWS*PTPRWE
Trigger: CTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTA...AATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCTCAGCTTCCTCCACTaGATACATCTCTCGCCAAAA +
Preference number: 4 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNLSFLH*IHLSPK
Trigger: TTTTGGCGAGAGATGTATTCAGTGGAGGAAGCTGAG...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp GGAGTCACATTTCATAGTGTCTCATCTCCAAATCAGATAAAAGTGGTATACAGGCTCAGCTTCCTCCACTaGATACATCTCTCGCCAAAA +
Preference number: 4 (lower is better)
Translates to: GVTFHSVSSPNQIKVVYRLSFLH*IHLSPK
Trigger: TTTTGGCGAGAGATGTATTCAGTGGAGGAAGCTGAG...CCTGTATACCACTTTTATCTGATTTGGAGATGAGACACTATGAAATGTGACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR TCA 90 bp CCAAATCAGATAAAAGTGGTATACAGGGTTCCATCCAGAAAGCATTCAGTCAGAGATCTGCACCCAAACTaGGAAACCTGGTCCAATTTA +
Preference number: 4 (lower is better)
Translates to: PNQIKVVYRVPSRKHSVRDLHPN*ETWSNL
Trigger: TAAATTGGACCAGGTTTCTCAGTTTGGGTGCAGATC...TCTGACTGAATGCTTTCTGGATGGAACCCTGTATACCACTTTTATCTGATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR TCA 90 bp ATAAGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCAAAAAGCAAAGCAAATaGTCTGCACCCAAACTGAGA +
Preference number: 4 (lower is better)
Translates to: ISPCKRSQHLTQDSKRKPKKQSK*SAPKLR
Trigger: TCTCAGTTTGGGTGCAGATCATTTGCTTTGCTTTTT...GGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TCAACTACCATTCACAAGGTGCAGTTAAGAGACTTTTGGACAGTTCACAGTGTCGATAGATTTCATTTGTaGTGGAGACTTGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: STTIHKVQLRDFWTVHSVDRFHL*WRLGHE
Trigger: CTCATGCCCAAGTCTCCATCACAAATGAAATCTATC...GACACTGTGAACTGTCCAAAAGTCTCTTAACTGCACCTTGTGAATGGTAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TGTTATCAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGCATCTCTGGGGATTTTaGTTCAGCTATGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: CYQDTASSRKLVESHFIVHLWGF*FSYALF
Trigger: AAAGAGAGCATAGCTGAATCAAAATCCCCAGAGATG...CACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTGATAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR TCA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGAATTGGAGAGCCGAGTaGACATTCCCATCACTAGTC +
Preference number: 4 (lower is better)
Translates to: HLSFIQDLLQYYILPTSENWRAE*TFPSLV
Trigger: GACTAGTGATGGGAATGTTCACTCGGCTCTCCAATT...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACGTCAGTGGAGGTGGCTaGAAAAAGAGATCATTTGCC +
Preference number: 4 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNVSGGG*KKRSFA
Trigger: GGCAAATGATCTCTTTTTTCAGCCACCTCCACTGAC...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TTATTTATTCAGCTTAAACTAATGCCACAACCATCCCACTTGGAATCACTCCACGTCAGTGGAGGTGGCTaGAAAAAGAGATCATTTGCC +
Preference number: 4 (lower is better)
Translates to: LFIQLKLMPQPSHLESLHVSGGG*KKRSFA
Trigger: GGCAAATGATCTCTTTTTTCAGCCACCTCCACTGAC...GTGGAGTGATTCCAAGTGGGATGGTTGTGGCATTAGTTTAAGCTGAATAAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TGCATACTCAAAGGCTTTGGTTGGAAGTCACTAGGTACCACTAGGTACAATGCTTCGAATCCAATTGGCTaGTTTGTTACCATTCTAGAG +
Preference number: 4 (lower is better)
Translates to: CILKGFGWKSLGTTRYNASNPIG*FVTILE
Trigger: CTCTAGAATGGTAACAAATCAGCCAATTGGATTCGA...AGCATTGTACCTAGTGGTACCTAGTGACTTCCAACCAAAGCCTTTGAGTATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp CAACCACACTGGATGCAGAAAATAGTGCTGACTACATTTATTGAAGACTCTCTCTTGAGATTAAACAACTaGCCTGAGGGCAAATGGGAC +
Preference number: 4 (lower is better)
Translates to: QPHWMQKIVLTTFIEDSLLRLNN*PEGKWD
Trigger: GTCCCATTTGCCCTCAGGTCAGTTGTTTAATCTCAA...GAGAGAGTCTTCAATAAATGTAGTCAGCACTATTTTCTGCATCCAGTGTGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp ACTACTATGAAAACTATGACATGTCAGTCAGCCTTGCTGCCTGCTGTGTGCTGTTTAAGATACTTATGCTaGATTAGCCCAAGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: TTMKTMTCQSALLPAVCCLRYLC*ISPREK
Trigger: TTTCTCCCTTGGGCTAATTCAGCATAAGTATCTTAA...ACAGCACACAGCAGGCAGCAAGGCTGACTGACATGTCATAGTTTTCATAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTTTGGATAACAGAAAGTaGCACAGTATTCTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFLDNRK*HSILWD
Trigger: GTCCCACAGAATACTGTGGCACTTTCTGTTATCCAA...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGCCCATCAACTACACTTaGTTTAGCTCCACTGTGTGC +
Preference number: 4 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVPINYT*FSSTVC
Trigger: GCACACAGTGGAGCTAAAGCAAGTGTAGTTGATGGG...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp GACAATTGGCCACGGCTTTACAAAAAGCAGAATAACTGCCCCAAATTGAAATTACCCATCAACTACACTTaGTTTAGCTCCACTGTGTGC +
Preference number: 4 (lower is better)
Translates to: DNWPRLYKKQNNCPKLKLPINYT*FSSTVC
Trigger: GCACACAGTGGAGCTAAAGCAAGTGTAGTTGATGGG...TAATTTCAATTTGGGGCAGTTATTCTGCTTTTTGTAAAGCCGTGGCCAATTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp CAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCGGACCTGGCACAAACTaGTCCTTGTTTGTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: QSVMGEFYIVFFVSNPIGGPGTN*SLFVCS
Trigger: TGAACAGACAAACAAGGAGCAGTTTGTGCCAGGTCC...GCCAATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGGGACCTGGCACAAACTaGTCCTTGTTTGTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: HLSFIQDLLQYYILPTSEGPGTN*SLFVCS
Trigger: TGAACAGACAAACAAGGAGCAGTTTGTGCCAGGTCC...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp GGAGTCACATTTCATAGTGTCTCATCTCCAAATCAGATAAAAGTGGTATACAGGGGACCTGGCACAAACTaGTCCTTGTTTGTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: GVTFHSVSSPNQIKVVYRGPGTN*SLFVCS
Trigger: TGAACAGACAAACAAGGAGCAGTTTGTGCCAGGTCC...CCTGTATACCACTTTTATCTGATTTGGAGATGAGACACTATGAAATGTGACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGAGATCAGCAAGTAACTaGAAATCCTCCAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQRSASN*KSSRVT
Trigger: AGTGACCCTGGAGGATTTGCAGTTACTTGCTGATCT...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp AACCTTCTCTCCTTTCTTCTCACCTATTTAGTGCATACTCAAAGGCTTTGGTTGAGATCAGCAAGTAACTaGAAATCCTCCAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: NLLSFLLTYLVHTQRLWLRSASN*KSSRVT
Trigger: AGTGACCCTGGAGGATTTGCAGTTACTTGCTGATCT...CAACCAAAGCCTTTGAGTATGCACTAAATAGGTGAGAAGAAAGGAGAGAAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp AGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACAGACAACACTACTATTTaGTCGAAGCCATTGAAATTC +
Preference number: 4 (lower is better)
Translates to: SPCKRSQHLTQDSKRKPTDNTTI*SKPLKF
Trigger: GAATTTCAATGGCTTCGAGCAAATAGTAGTGTTGTC...TGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp CAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCGGGTCACATCTACAGTaGCCAAGGCATAACCACATA +
Preference number: 4 (lower is better)
Translates to: QSVMGEFYIVFFVSNPIGGSHLQ*PRHNHI
Trigger: TATGTGGTTATGCCTTGGGCACTGTAGATGTGACCC...GCCAATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp GACAATTGGCCACGGCTTTACAAAAAGCAGAATAACTGCCCCAAATTGAAATTAGGGTCACATCTACAGTaGCCAAGGCATAACCACATA +
Preference number: 4 (lower is better)
Translates to: DNWPRLYKKQNNCPKLKLGSHLQ*PRHNHI
Trigger: TATGTGGTTATGCCTTGGGCACTGTAGATGTGACCC...TAATTTCAATTTGGGGCAGTTATTCTGCTTTTTGTAAAGCCGTGGCCAATTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp GACCAATCAGTCCCTGAACCCTACCTGACATGTCAAATCCAACATTTCACATGCCTACAAAGTACAACATaGCTGAACCAACAGTCATTA +
Preference number: 4 (lower is better)
Translates to: DQSVPEPYLTCQIQHFTCLQSTT*LNQQSL
Trigger: TAATGACTGTTGGTTCAGGCATGTTGTACTTTGTAG...GCATGTGAAATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGACTGATTGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp GGAGTCACATTTCATAGTGTCTCATCTCCAAATCAGATAAAAGTGGTATACAGGGTCAGCCTTGCTGCCTaGTGTGTGCTGTATATAAGT +
Preference number: 4 (lower is better)
Translates to: GVTFHSVSSPNQIKVVYRVSLAA*CVLYIS
Trigger: ACTTATATACAGCACACAGCAGGCAGCAAGGCTGAC...CCTGTATACCACTTTTATCTGATTTGGAGATGAGACACTATGAAATGTGACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CCA 90 bp TATCAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGTCTTGCCACAGTATTCTGTaGGACAGAAGAGGAAAGTTT +
Preference number: 4 (lower is better)
Translates to: YQDTASSRKLVESHFIVSCHSIL*DRRGKF
Trigger: AAACTTTCCTCTTCTGTCCCACAGAATACTGTGGCA...AGACACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CCA 90 bp ATAAGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCTACAATCTTCTTGCATaGACATCTCTGGGGATTTTG +
Preference number: 4 (lower is better)
Translates to: ISPCKRSQHLTQDSKRKPYNLLA*TSLGIL
Trigger: CAAAATCCCCAGAGATGTCCATGCAAGAAGATTGTA...GGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TCTCAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTATCCTCCAGGGTCACTaGTTCCGCAGTGTACAAAGG +
Preference number: 4 (lower is better)
Translates to: SQSVMGEFYIVFFVSNPIILQGH*FRSVQR
Trigger: CCTTTGTACACTGCGGAACCAGTGACCCTGGAGGAT...AATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACACATCTGTGCTCCTTTaGGTCCATGCTCGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNTSVLL*VHARKE
Trigger: TTCCTTACGAGCATGGACCCAAAGGAGCACAGATGT...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CCAAATCAGATAAAAGTGGTATACAGGGTTCCATCCAGAAAGCATTCAGTCAGAGTCCCTAGAGAAACTTaGCCATGCTGGTGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: PNQIKVVYRVPSRKHSVRVPRET*PCWCFL
Trigger: TAAAAAGCACCAGCATGGCCAAGTTTCTCTAGGGAC...TCTGACTGAATGCTTTCTGGATGGAACCCTGTATACCACTTTTATCTGATTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370094.7
3UTR CAA 72 bp GTCAATTGTAGGCTTTTGCCACAAACAAATGCACATTaGTCCCTACAAAGTACAACATGCCTGAACCAACAG +
Preference number: 4 (lower is better)
Translates to: VNCRLLPQTNAH*SLQSTTCLNQQ
Trigger: CTGTTGGTTCAGGCATGTTGTACTTTGTAGGGACAAATGTGCATTTGTTTGTGGCAAAAGCCTACAATTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACGATATCCAATCCAGGTaGGATCGCATAGATGAACTC +
Preference number: 4 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNDIQSR*DRIDEL
Trigger: GAGTTCATCTATGCGATCTCACCTGGATTGGATATC...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGGATCTGCACCCAAACTaGGAAACCTGGTCCAATTTA +
Preference number: 4 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVDLHPN*ETWSNL
Trigger: TAAATTGGACCAGGTTTCTCAGTTTGGGTGCAGATC...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp GACAATTGGCCACGGCTTTACAAAAAGCAGAATAACTGCCCCAAATTGAAATTAGATCTGCACCCAAACTaGGAAACCTGGTCCAATTTA +
Preference number: 4 (lower is better)
Translates to: DNWPRLYKKQNNCPKLKLDLHPN*ETWSNL
Trigger: TAAATTGGACCAGGTTTCTCAGTTTGGGTGCAGATC...TAATTTCAATTTGGGGCAGTTATTCTGCTTTTTGTAAAGCCGTGGCCAATTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp AAGTGGTATACAGGGTTCCATCCAGAAAGCATTCAGTCAGAGCAAGTTAAAGTCAAAAAGCAAAGCAAATaGTCTGCACCCAAACTGAGA +
Preference number: 4 (lower is better)
Translates to: KWYTGFHPESIQSEQVKVKKQSK*SAPKLR
Trigger: TCTCAGTTTGGGTGCAGATCATTTGCTTTGCTTTTT...GACTTTAACTTGCTCTGACTGAATGCTTTCTGGATGGAACCCTGTATACCACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR TCA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGCATGAGCAAAAGAACTaGATACCTCTTTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQHEQKN*IPLCLL
Trigger: CAGCAGACAAAGAGGTATTCAGTTCTTTTGCTCATG...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp AATGAAATGAAGTCCCTAGAGAAACTTGGCCATGCTGGTGCTTTTTACCAAGTTCATGAGCAAAAGAACTaGATACCTCTTTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: NEMKSLEKLGHAGAFYQVHEQKN*IPLCLL
Trigger: CAGCAGACAAAGAGGTATTCAGTTCTTTTGCTCATG...AACTTGGTAAAAAGCACCAGCATGGCCAAGTTTCTCTAGGGACTTCATTTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR TCA 90 bp CAACCACACTGGATGCAGAAAATAGTGCTGACTACATTTATTGAAGACTCTCTCGATAGATTTCATTTGTaGTGGAGACTTGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: QPHWMQKIVLTTFIEDSLDRFHL*WRLGHE
Trigger: CTCATGCCCAAGTCTCCATCACAAATGAAATCTATC...GAGAGAGTCTTCAATAAATGTAGTCAGCACTATTTTCTGCATCCAGTGTGGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp CCAAATCAGATAAAAGTGGTATACAGGGTTCCATCCAGAAAGCATTCAGTCAGAGATAGATTTCATTTGTaGTGGAGACTTGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: PNQIKVVYRVPSRKHSVRDRFHL*WRLGHE
Trigger: CTCATGCCCAAGTCTCCATCACAAATGAAATCTATC...TCTGACTGAATGCTTTCTGGATGGAACCCTGTATACCACTTTTATCTGATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR TCA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCACTCCATTCATGTTTaGTTTGTACCAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNHSIHV*FVPGGK
Trigger: CTTGCCACCTGGTACAAATCAAACATGAATGGAGTG...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGAAACTTGGCTGCTCGTaGCCGCCATTCTTCAATTTT +
Preference number: 4 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVKLGCS*PPFFNF
Trigger: AAAATTGAAGAATGGCGGTCACGAGCAGCCAAGTTT...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGAATTGTGCTGAAGAATaGCTACGACACCCTAACCAC +
Preference number: 4 (lower is better)
Translates to: HLSFIQDLLQYYILPTSENCAEE*LRHPNH
Trigger: GTGGTTAGGGTGTCGTAGTCATTCTTCAGCACAATT...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTGCTGACTACATTTATTaGAGACTCTCTCCCTGTATA +
Preference number: 4 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFADYIY*RLSPCI
Trigger: TATACAGGGAGAGAGTCTTCAATAAATGTAGTCAGC...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TGCACATTTGTCCCTACAAAGTACAACATGCCTGAACCAACAGTCATTACAGGAGCTGACTACATTTATTaGAGACTCTCTCCCTGTATA +
Preference number: 4 (lower is better)
Translates to: CTFVPTKYNMPEPTVITGADYIY*RLSPCI
Trigger: TATACAGGGAGAGAGTCTTCAATAAATGTAGTCAGC...TCCTGTAATGACTGTTGGTTCAGGCATGTTGTACTTTGTAGGGACAAATGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp CAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCATTAAACAACTGACCTaGGGGCAAATGGGACCAATC +
Preference number: 4 (lower is better)
Translates to: QSVMGEFYIVFFVSNPIGIKQLT*GQMGPI
Trigger: GATTGGTCCCATTTGCCCTCAGGTCAGTTGTTTAAT...GCCAATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACATTAAACAACTGACCTaGGGGCAAATGGGACCAATC +
Preference number: 4 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNIKQLT*GQMGPI
Trigger: GATTGGTCCCATTTGCCCTCAGGTCAGTTGTTTAAT...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TGCATACTCAAAGGCTTTGGTTGGAAGTCACTAGGTACCACTAGGTACAATGCTACAGGAACTGAGCTCTaGTCCAAACAATCAATAAAA +
Preference number: 4 (lower is better)
Translates to: CILKGFGWKSLGTTRYNATGTEL*SKQSIK
Trigger: TTTTATTGATTGTTTGGATCAGAGCTCAGTTCCTGT...AGCATTGTACCTAGTGGTACCTAGTGACTTCCAACCAAAGCCTTTGAGTATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TATCAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGTCTTATCTCATATTCTCGTaGAGCAGAGATGAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: YQDTASSRKLVESHFIVSYLIFS*SRDESH
Trigger: ATGACTCTCATCTCTGCTGCACGAGAATATGAGATA...AGACACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTGAATACCTCTTTGTCTaGTGCACACATATTATGGTC +
Preference number: 4 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFEYLFV*CTHIMV
Trigger: GACCATAATATGTGTGCAGCAGACAAAGAGGTATTC...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTTGGATAACAGAAAGTaGCACAGTATTCTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQLDNRK*HSILWD
Trigger: GTCCCACAGAATACTGTGGCACTTTCTGTTATCCAA...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp GGAGTCACATTTCATAGTGTCTCATCTCCAAATCAGATAAAAGTGGTATACAGGGTCTGTTCATCAGTTTaGATGGGGGCAATGTCACTA +
Preference number: 4 (lower is better)
Translates to: GVTFHSVSSPNQIKVVYRVCSSV*MGAMSL
Trigger: TAGTGACATTGCCCCCATGCAAACTGATGAACAGAC...CCTGTATACCACTTTTATCTGATTTGGAGATGAGACACTATGAAATGTGACTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp CAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCGTCTGTTCATCAGTTTaGATGGGGGCAATGTCACTA +
Preference number: 4 (lower is better)
Translates to: QSVMGEFYIVFFVSNPIGVCSSV*MGAMSL
Trigger: TAGTGACATTGCCCCCATGCAAACTGATGAACAGAC...GCCAATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TTATTTATTCAGCTTAAACTAATGCCACAACCATCCCACTTGGAATCACTCCACAGATCAGCAAGTAACTaGAAATCCTCCAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: LFIQLKLMPQPSHLESLHRSASN*KSSRVT
Trigger: AGTGACCCTGGAGGATTTGCAGTTACTTGCTGATCT...GTGGAGTGATTCCAAGTGGGATGGTTGTGGCATTAGTTTAAGCTGAATAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TCAACTACCATTCACAAGGTGCAGTTAAGAGACTTTTGGACAGTTCACAGTGTCCGTCATACATTTCTCTaGAAATCTTGTACACGGATG +
Preference number: 4 (lower is better)
Translates to: STTIHKVQLRDFWTVHSVRHTFL*KSCTRM
Trigger: CATCCGTGTACAAGATTTGCAGAGAAATGTATGACG...GACACTGTGAACTGTCCAAAAGTCTCTTAACTGCACCTTGTGAATGGTAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TGCACATTTGTCCCTACAAAGTACAACATGCCTGAACCAACAGTCATTACAGGAAGGCATAACCACATATaGCATCTTCATCTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: CTFVPTKYNMPEPTVITGRHNHI*HLHLLG
Trigger: TCCTAGAAGATGAAGATGGCATATGTGGTTATGCCT...TCCTGTAATGACTGTTGGTTCAGGCATGTTGTACTTTGTAGGGACAAATGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp ATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTGGGTCACATCTACAGTaGCCAAGGCATAACCACATA +
Preference number: 4 (lower is better)
Translates to: ISLSYRICCNTIFFQPVSGSHLQ*PRHNHI
Trigger: TATGTGGTTATGCCTTGGGCACTGTAGATGTGACCC...ACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp CAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCTTGGTATACTTCTCCTaGATGAAGGGGATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: QSVMGEFYIVFFVSNPIGLVYFS*MKGIQE
Trigger: TTCCTGGATCCCCTTCATGCAGGAGAAGTATACCAA...GCCAATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGTTGGTATACTTCTCCTaGATGAAGGGGATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVLVYFS*MKGIQE
Trigger: TTCCTGGATCCCCTTCATGCAGGAGAAGTATACCAA...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp GACAATTGGCCACGGCTTTACAAAAAGCAGAATAACTGCCCCAAATTGAAATTATTGGTATACTTCTCCTaGATGAAGGGGATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: DNWPRLYKKQNNCPKLKLLVYFS*MKGIQE
Trigger: TTCCTGGATCCCCTTCATGCAGGAGAAGTATACCAA...TAATTTCAATTTGGGGCAGTTATTCTGCTTTTTGTAAAGCCGTGGCCAATTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp CAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCTTTAGCTCCACTGTGTaGAACTTGCCTACTCATCAC +
Preference number: 4 (lower is better)
Translates to: QSVMGEFYIVFFVSNPIGFSSTV*NLPTHH
Trigger: GTGATGAGTAGGCAAGTTGCACACAGTGGAGCTAAA...GCCAATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357797.9
ENST00000439817.5
CDS-3UTR GCA 90 bp CTTTTTATTCTAAGCTCACGGTGTTTCAGATATCTATTTCACAACCAAGACCATGTCAGTCAGCCTTGCTaGCTGCTGTGTGCTGTATAT +
Preference number: 4 (lower is better)
Translates to: LFILSSRCFRYLFHNQDHVSQPC*LLCAVY
Trigger: ATATACAGCACACAGCAGGCAGCAAGGCTGACTGAC...ATGGTCTTGGTTGTGAAATAGATATCTGAAACACCGTGAGCTTAGAATAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CCA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGCCACAGTATTCTGTaGGACAGAAGAGGAAAGTTT +
Preference number: 4 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQCHSIL*DRRGKF
Trigger: AAACTTTCCTCTTCTGTCCCACAGAATACTGTGGCA...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TGTTATCAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGAGACTGAGACACATTTaGATAACAGAAAGTGCCACA +
Preference number: 4 (lower is better)
Translates to: CYQDTASSRKLVESHFIVRLRHI*ITESAT
Trigger: TGTGGCACTTTCTGTTATCCAAATGTGTCTCAGTCT...CACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTGATAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CCA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTAGACTGAGACACATTTaGATAACAGAAAGTGCCACA +
Preference number: 4 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFRLRHI*ITESAT
Trigger: TGTGGCACTTTCTGTTATCCAAATGTGTCTCAGTCT...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp AGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATTCGATGGACTCTACTaGAATTTCTTTAGAAACAAC +
Preference number: 4 (lower is better)
Translates to: SPCKRSQHLTQDSKRKPTFDGLY*NFFRNN
Trigger: GTTGTTTCTAAAGAAATTCCAGTAGAGTCCATCGAA...TGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp AATGAAATGAAGTCCCTAGAGAAACTTGGCCATGCTGGTGCTTTTTACCAAGTTCTTTTCATTTGGACCTaGCACAAACTGCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: NEMKSLEKLGHAGAFYQVLFIWT*HKLLLV
Trigger: AACAAGGAGCAGTTTGTGCCAGGTCCAAATGAAAAG...AACTTGGTAAAAAGCACCAGCATGGCCAAGTTTCTCTAGGGACTTCATTTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CCA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGAAAGAATTGTCCTGTTaGCACAATTGGAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVKELSC*HNWRAE
Trigger: CTCGGCTCTCCAATTGTGCCAACAGGACAATTCTTT...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGAAAGAATTGTCCTGTTaGCACAATTGGAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: HLSFIQDLLQYYILPTSEKELSC*HNWRAE
Trigger: CTCGGCTCTCCAATTGTGCCAACAGGACAATTCTTT...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGAAGCCATCATGCTTTTaGCCACACTTGGGTCAGTTA +
Preference number: 4 (lower is better)
Translates to: HLSFIQDLLQYYILPTSEKPSCF*PHLGQL
Trigger: TAACTGACCCAAGTGTGGCCAAAAGCATGATGGCTT...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGGAAACGCAACCACACTaGATGCAGAAAATAGTGCTG +
Preference number: 4 (lower is better)
Translates to: HLSFIQDLLQYYILPTSEETQPH*MQKIVL
Trigger: CAGCACTATTTTCTGCATCCAGTGTGGTTGCGTTTC...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp AACCTTCTCTCCTTTCTTCTCACCTATTTAGTGCATACTCAAAGGCTTTGGTTGTCTCAAAGCCCACAATaGTGGAGTTCTGTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: NLLSFLLTYLVHTQRLWLSQSPQ*WSSVKE
Trigger: TTCTTTCACAGAACTCCACCATTGTGGGCTTTGAGA...CAACCAAAGCCTTTGAGTATGCACTAAATAGGTGAGAAGAAAGGAGAGAAGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TTATTTATTCAGCTTAAACTAATGCCACAACCATCCCACTTGGAATCACTCCACCTCAAAGGCTTTGGTTaGAAGTCACTAGGTACCACT +
Preference number: 4 (lower is better)
Translates to: LFIQLKLMPQPSHLESLHLKGFG*KSLGTT
Trigger: AGTGGTACCTAGTGACTTCCAACCAAAGCCTTTGAG...GTGGAGTGATTCCAAGTGGGATGGTTGTGGCATTAGTTTAAGCTGAATAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGCATACTCAAAGGCTTTaGTTGGAAGTCACTAGGTAC +
Preference number: 4 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQHTQRL*LEVTRY
Trigger: GTACCTAGTGACTTCCAACCAAAGCCTTTGAGTATG...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp CAACCACACTGGATGCAGAAAATAGTGCTGACTACATTTATTGAAGACTCTCTCGTGAGATCGCATAGATaGACTCTATCTCATATTCTC +
Preference number: 4 (lower is better)
Translates to: QPHWMQKIVLTTFIEDSLVRSHR*TLSHIL
Trigger: GAGAATATGAGATAGAGTTCATCTATGCGATCTCAC...GAGAGAGTCTTCAATAAATGTAGTCAGCACTATTTTCTGCATCCAGTGTGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGCATGAGCAAAAGAACTaGATACCTCTTTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVHEQKN*IPLCLL
Trigger: CAGCAGACAAAGAGGTATTCAGTTCTTTTGCTCATG...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGGATAGATTTCATTTGTaGTGGAGACTTGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVDRFHL*WRLGHE
Trigger: CTCATGCCCAAGTCTCCATCACAAATGAAATCTATC...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp ATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTCTTTTAACCGTGGGATaGGTTCTGTGGATCTTCCTT +
Preference number: 4 (lower is better)
Translates to: ISLSYRICCNTIFFQPVSLLTVG*VLWIFL
Trigger: AAGGAAGATCCACAGAACTCATCCCACGGTTAAAAG...ACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TCAACTACCATTCACAAGGTGCAGTTAAGAGACTTTTGGACAGTTCACAGTGTCATTTCACTCAGTATTTaGTTGTCATTCTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: STTIHKVQLRDFWTVHSVISLSI*LSFLWS
Trigger: GGACCACAAGAATGACAATCAAATACTGAGTGAAAT...GACACTGTGAACTGTCCAAAAGTCTCTTAACTGCACCTTGTGAATGGTAGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp CAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCCATCTCTGGGGATTTTaGTTCAGCTATGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: QSVMGEFYIVFFVSNPIGHLWGF*FSYALF
Trigger: AAAGAGAGCATAGCTGAATCAAAATCCCCAGAGATG...GCCAATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTTTGCTCGAAGCCATTaGAATTCCCGTAACATCTGT +
Preference number: 4 (lower is better)
Translates to: HLSFIQDLLQYYILPTSEFARSH*NSRNIC
Trigger: ACAGATGTTACGGGAATTTCAATGGCTTCGAGCAAA...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TTATTTATTCAGCTTAAACTAATGCCACAACCATCCCACTTGGAATCACTCCACTTTGCTCGAAGCCATTaGAATTCCCGTAACATCTGT +
Preference number: 4 (lower is better)
Translates to: LFIQLKLMPQPSHLESLHFARSH*NSRNIC
Trigger: ACAGATGTTACGGGAATTTCAATGGCTTCGAGCAAA...GTGGAGTGATTCCAAGTGGGATGGTTGTGGCATTAGTTTAAGCTGAATAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp CTTTTTATTCTAAGCTCACGGTGTTTCAGATATCTATTTCACAACCAAGACCATAATTGGAGAGCCGAGTaGACATTCCCATCACTAGTC +
Preference number: 4 (lower is better)
Translates to: LFILSSRCFRYLFHNQDHNWRAE*TFPSLV
Trigger: GACTAGTGATGGGAATGTTCACTCGGCTCTCCAATT...ATGGTCTTGGTTGTGAAATAGATATCTGAAACACCGTGAGCTTAGAATAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR TCA 90 bp ATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAATTGTGCTGAAGAATaGCTACGACACCCTAACCAC +
Preference number: 4 (lower is better)
Translates to: ISLSYRICCNTIFFQPVSNCAEE*LRHPNH
Trigger: GTGGTTAGGGTGTCGTAGTCATTCTTCAGCACAATT...ACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TCTCAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTTTGATTACTCTCAGGTaGGAAACGCAACCACACTGG +
Preference number: 4 (lower is better)
Translates to: SQSVMGEFYIVFFVSNPILITLR*ETQPHW
Trigger: CCAGTGTGGTTGCGTTTCTCACCTGAGAGTAATCAA...AATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp GACAATTGGCCACGGCTTTACAAAAAGCAGAATAACTGCCCCAAATTGAAATTACCAGACCAGCCAACATaGTTACTAAAAGCCAAGATA +
Preference number: 4 (lower is better)
Translates to: DNWPRLYKKQNNCPKLKLPDQPT*LLKAKI
Trigger: TATCTTGGCTTTTAGTAATCATGTTGGCTGGTCTGG...TAATTTCAATTTGGGGCAGTTATTCTGCTTTTTGTAAAGCCGTGGCCAATTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TTATTTATTCAGCTTAAACTAATGCCACAACCATCCCACTTGGAATCACTCCACGTTTTCTACAGGAACTaGGCTCTGATCCAAACAATC +
Preference number: 4 (lower is better)
Translates to: LFIQLKLMPQPSHLESLHVFYRN*ALIQTI
Trigger: GATTGTTTGGATCAGAGCTCAGTTCCTGTAGAAAAC...GTGGAGTGATTCCAAGTGGGATGGTTGTGGCATTAGTTTAAGCTGAATAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp AACCTTCTCTCCTTTCTTCTCACCTATTTAGTGCATACTCAAAGGCTTTGGTTGTATCTCATATTCTCGTaGAGCAGAGATGAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: NLLSFLLTYLVHTQRLWLYLIFS*SRDESH
Trigger: ATGACTCTCATCTCTGCTGCACGAGAATATGAGATA...CAACCAAAGCCTTTGAGTATGCACTAAATAGGTGAGAAGAAAGGAGAGAAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTTACCTCTTTGTCTGCTaGACACATATTATGGTCTAT +
Preference number: 4 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFYLFVC*THIMVY
Trigger: ATAGACCATAATATGTGTGCAGCAGACAAAGAGGTA...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGGAATACCTCTTTGTCTaGTGCACACATATTATGGTC +
Preference number: 4 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQEYLFV*CTHIMV
Trigger: GACCATAATATGTGTGCAGCAGACAAAGAGGTATTC...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACTTGGATAACAGAAAGTaGCACAGTATTCTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNLDNRK*HSILWD
Trigger: GTCCCACAGAATACTGTGGCACTTTCTGTTATCCAA...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp ATAAGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCATTTTGATTCAGCTATaGTCTCTTTATCAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ISPCKRSQHLTQDSKRKPILIQL*SLYQCP
Trigger: TGGACACTGATAAAGAGAGCATAGCTGAATCAAAAT...GGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp ATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTGTCTGTTCATCAGTTTaGATGGGGGCAATGTCACTA +
Preference number: 4 (lower is better)
Translates to: ISLSYRICCNTIFFQPVSVCSSV*MGAMSL
Trigger: TAGTGACATTGCCCCCATGCAAACTGATGAACAGAC...ACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTGACAACACTACTATTTaGTCGAAGCCATTGAAATTC +
Preference number: 4 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFDNTTI*SKPLKF
Trigger: GAATTTCAATGGCTTCGAGCAAATAGTAGTGTTGTC...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTAATCTTGTACACGGATaGCTCATCCTTAGGAAAATA +
Preference number: 4 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFNLVHG*LILRKI
Trigger: TATTTTCCTAAGGATGAGGCATCCGTGTACAAGATT...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp AACCTTCTCTCCTTTCTTCTCACCTATTTAGTGCATACTCAAAGGCTTTGGTTGTATCTGCCAGCTTCATaGTCAGAACCCTTAAAAACA +
Preference number: 4 (lower is better)
Translates to: NLLSFLLTYLVHTQRLWLYLPAS*SEPLKT
Trigger: TGTTTTTAAGGGTTCTGAGCATGAAGCTGGCAGATA...CAACCAAAGCCTTTGAGTATGCACTAAATAGGTGAGAAGAAAGGAGAGAAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp CAACCACACTGGATGCAGAAAATAGTGCTGACTACATTTATTGAAGACTCTCTCTCAAGCCCTCAAAAATaGAAACTTGGTTCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: QPHWMQKIVLTTFIEDSLSSPQK*KLGSSF
Trigger: AAAGCTGGAACCAAGTTTGCATTTTTGAGGGCTTGA...GAGAGAGTCTTCAATAAATGTAGTCAGCACTATTTTCTGCATCCAGTGTGGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp GGAGTCACATTTCATAGTGTCTCATCTCCAAATCAGATAAAAGTGGTATACAGGACTTGGCCATGCTGGTaGTTTTTACCAAGTTTGACA +
Preference number: 4 (lower is better)
Translates to: GVTFHSVSSPNQIKVVYRTWPCW*FLPSLT
Trigger: TGTCAAACTTGGTAAAAAGCACCAGCATGGCCAAGT...CCTGTATACCACTTTTATCTGATTTGGAGATGAGACACTATGAAATGTGACTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp GGAGTCACATTTCATAGTGTCTCATCTCCAAATCAGATAAAAGTGGTATACAGGAGAGAAACTTGGCCATaGTGGTGCTTTTTACCAAGT +
Preference number: 4 (lower is better)
Translates to: GVTFHSVSSPNQIKVVYRRETWP*WCFLPS
Trigger: ACTTGGTAAAAAGCACCAGCATGGCCAAGTTTCTCT...CCTGTATACCACTTTTATCTGATTTGGAGATGAGACACTATGAAATGTGACTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CCA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTGCCACAGTATTCTGTaGGACAGAAGAGGAAAGTTT +
Preference number: 4 (lower is better)
Translates to: HLSFIQDLLQYYILPTSECHSIL*DRRGKF
Trigger: AAACTTTCCTCTTCTGTCCCACAGAATACTGTGGCA...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp ATAAGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCTTCGATGGACTCTACTaGAATTTCTTTAGAAACAAC +
Preference number: 4 (lower is better)
Translates to: ISPCKRSQHLTQDSKRKPFDGLY*NFFRNN
Trigger: GTTGTTTCTAAAGAAATTCCAGTAGAGTCCATCGAA...GGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp AATGAAATGAAGTCCCTAGAGAAACTTGGCCATGCTGGTGCTTTTTACCAAGTTTACAATCTTCTTGCATaGACATCTCTGGGGATTTTG +
Preference number: 4 (lower is better)
Translates to: NEMKSLEKLGHAGAFYQVYNLLA*TSLGIL
Trigger: CAAAATCCCCAGAGATGTCCATGCAAGAAGATTGTA...AACTTGGTAAAAAGCACCAGCATGGCCAAGTTTCTCTAGGGACTTCATTTCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CCA 90 bp CAACCACACTGGATGCAGAAAATAGTGCTGACTACATTTATTGAAGACTCTCTCTACAATCTTCTTGCATaGACATCTCTGGGGATTTTG +
Preference number: 4 (lower is better)
Translates to: QPHWMQKIVLTTFIEDSLYNLLA*TSLGIL
Trigger: CAAAATCCCCAGAGATGTCCATGCAAGAAGATTGTA...GAGAGAGTCTTCAATAAATGTAGTCAGCACTATTTTCTGCATCCAGTGTGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCTTTTCATTTGGACCTaGCACAAACTGCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNLFIWT*HKLLLV
Trigger: AACAAGGAGCAGTTTGTGCCAGGTCCAAATGAAAAG...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp ATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTCTCAAAGGCTTTGGTTaGAAGTCACTAGGTACCACT +
Preference number: 4 (lower is better)
Translates to: ISLSYRICCNTIFFQPVSLKGFG*KSLGTT
Trigger: AGTGGTACCTAGTGACTTCCAACCAAAGCCTTTGAG...ACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TTATTTATTCAGCTTAAACTAATGCCACAACCATCCCACTTGGAATCACTCCACCATACTCAAAGGCTTTaGTTGGAAGTCACTAGGTAC +
Preference number: 4 (lower is better)
Translates to: LFIQLKLMPQPSHLESLHHTQRL*LEVTRY
Trigger: GTACCTAGTGACTTCCAACCAAAGCCTTTGAGTATG...GTGGAGTGATTCCAAGTGGGATGGTTGTGGCATTAGTTTAAGCTGAATAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp GTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTCATACATTTTGCCTCTTGCATaGTCTTTTACAGTTCGTTTT +
Preference number: 4 (lower is better)
Translates to: VSAPNTRLKKEAHISLSYILPLA*SFTVRF
Trigger: AAAACGAACTGTAAAAGACCATGCAAGAGGCAAAAT...GTATGAAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CCAAATCAGATAAAAGTGGTATACAGGGTTCCATCCAGAAAGCATTCAGTCAGACGAATTGAAGAGACTTaGAAATGTGCCAATTCCCTA +
Preference number: 4 (lower is better)
Translates to: PNQIKVVYRVPSRKHSVRRIEET*KCANSL
Trigger: TAGGGAATTGGCACATTTCCAAGTCTCTTCAATTCG...TCTGACTGAATGCTTTCTGGATGGAACCCTGTATACCACTTTTATCTGATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CCA 90 bp GGAGTCACATTTCATAGTGTCTCATCTCCAAATCAGATAAAAGTGGTATACAGGGAAACTTGGCCATGCTaGTGCTTTTTACCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: GVTFHSVSSPNQIKVVYRETWPC*CFLPSL
Trigger: CAAACTTGGTAAAAAGCACCAGCATGGCCAAGTTTC...CCTGTATACCACTTTTATCTGATTTGGAGATGAGACACTATGAAATGTGACTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR TCA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGGTGAGATCGCATAGATaGACTCTATCTCATATTCTC +
Preference number: 4 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVVRSHR*TLSHIL
Trigger: GAGAATATGAGATAGAGTTCATCTATGCGATCTCAC...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp GGAGTCACATTTCATAGTGTCTCATCTCCAAATCAGATAAAAGTGGTATACAGGGTGAGATCGCATAGATaGACTCTATCTCATATTCTC +
Preference number: 4 (lower is better)
Translates to: GVTFHSVSSPNQIKVVYRVRSHR*TLSHIL
Trigger: GAGAATATGAGATAGAGTTCATCTATGCGATCTCAC...CCTGTATACCACTTTTATCTGATTTGGAGATGAGACACTATGAAATGTGACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR TCA 90 bp GACAATTGGCCACGGCTTTACAAAAAGCAGAATAACTGCCCCAAATTGAAATTAAAAAAGCAAAGCAAATaGTCTGCACCCAAACTGAGA +
Preference number: 4 (lower is better)
Translates to: DNWPRLYKKQNNCPKLKLKKQSK*SAPKLR
Trigger: TCTCAGTTTGGGTGCAGATCATTTGCTTTGCTTTTT...TAATTTCAATTTGGGGCAGTTATTCTGCTTTTTGTAAAGCCGTGGCCAATTGTC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp CTTTTTATTCTAAGCTCACGGTGTTTCAGATATCTATTTCACAACCAAGACCATCACTCCATTCATGTTTaGTTTGTACCAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: LFILSSRCFRYLFHNQDHHSIHV*FVPGGK
Trigger: CTTGCCACCTGGTACAAATCAAACATGAATGGAGTG...ATGGTCTTGGTTGTGAAATAGATATCTGAAACACCGTGAGCTTAGAATAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR TCA 90 bp AATGAAATGAAGTCCCTAGAGAAACTTGGCCATGCTGGTGCTTTTTACCAAGTTATTTCACTCAGTATTTaGTTGTCATTCTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: NEMKSLEKLGHAGAFYQVISLSI*LSFLWS
Trigger: GGACCACAAGAATGACAATCAAATACTGAGTGAAAT...AACTTGGTAAAAAGCACCAGCATGGCCAAGTTTCTCTAGGGACTTCATTTCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR TCA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGATTTCACTCAGTATTTaGTTGTCATTCTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQISLSI*LSFLWS
Trigger: GGACCACAAGAATGACAATCAAATACTGAGTGAAAT...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp CTTTTTATTCTAAGCTCACGGTGTTTCAGATATCTATTTCACAACCAAGACCATAAACTTGGCTGCTCGTaGCCGCCATTCTTCAATTTT +
Preference number: 4 (lower is better)
Translates to: LFILSSRCFRYLFHNQDHKLGCS*PPFFNF
Trigger: AAAATTGAAGAATGGCGGTCACGAGCAGCCAAGTTT...ATGGTCTTGGTTGTGAAATAGATATCTGAAACACCGTGAGCTTAGAATAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR TCA 90 bp CAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCTCGAATCCAATTGGCTaGTTTGTTACCATTCTAGAG +
Preference number: 4 (lower is better)
Translates to: QSVMGEFYIVFFVSNPIGSNPIG*FVTILE
Trigger: CTCTAGAATGGTAACAAATCAGCCAATTGGATTCGA...GCCAATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTCAAAGTGTGATGGGTaGGTTTTACATAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQSKCDG*VLHSLL
Trigger: AAGAAGACTATGTAAAACTCACCCATCACACTTTGA...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp AACCTTCTCTCCTTTCTTCTCACCTATTTAGTGCATACTCAAAGGCTTTGGTTGTCAAAGTGTGATGGGTaGGTTTTACATAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: NLLSFLLTYLVHTQRLWLSKCDG*VLHSLL
Trigger: AAGAAGACTATGTAAAACTCACCCATCACACTTTGA...CAACCAAAGCCTTTGAGTATGCACTAAATAGGTGAGAAGAAAGGAGAGAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp ATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTCCAGACCAGCCAACATaGTTACTAAAAGCCAAGATA +
Preference number: 4 (lower is better)
Translates to: ISLSYRICCNTIFFQPVSPDQPT*LLKAKI
Trigger: TATCTTGGCTTTTAGTAATCATGTTGGCTGGTCTGG...ACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGTATCTCATATTCTCGTaGAGCAGAGATGAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVYLIFS*SRDESH
Trigger: ATGACTCTCATCTCTGCTGCACGAGAATATGAGATA...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTACCTCTTTGTCTGCTaGACACATATTATGGTCTAT +
Preference number: 4 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQYLFVC*THIMVY
Trigger: ATAGACCATAATATGTGTGCAGCAGACAAAGAGGTA...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp AATGAAATGAAGTCCCTAGAGAAACTTGGCCATGCTGGTGCTTTTTACCAAGTTTACCTCTTTGTCTGCTaGACACATATTATGGTCTAT +
Preference number: 4 (lower is better)
Translates to: NEMKSLEKLGHAGAFYQVYLFVC*THIMVY
Trigger: ATAGACCATAATATGTGTGCAGCAGACAAAGAGGTA...AACTTGGTAAAAAGCACCAGCATGGCCAAGTTTCTCTAGGGACTTCATTTCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGGAATACCTCTTTGTCTaGTGCACACATATTATGGTC +
Preference number: 4 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVEYLFV*CTHIMV
Trigger: GACCATAATATGTGTGCAGCAGACAAAGAGGTATTC...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp GGAGTCACATTTCATAGTGTCTCATCTCCAAATCAGATAAAAGTGGTATACAGGGAATACCTCTTTGTCTaGTGCACACATATTATGGTC +
Preference number: 4 (lower is better)
Translates to: GVTFHSVSSPNQIKVVYREYLFV*CTHIMV
Trigger: GACCATAATATGTGTGCAGCAGACAAAGAGGTATTC...CCTGTATACCACTTTTATCTGATTTGGAGATGAGACACTATGAAATGTGACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp CTTTTTATTCTAAGCTCACGGTGTTTCAGATATCTATTTCACAACCAAGACCATTTTAGCTCCACTGTGTaGAACTTGCCTACTGCTGTA +
Preference number: 4 (lower is better)
Translates to: LFILSSRCFRYLFHNQDHFSSTV*NLPTAV
Trigger: TACAGCAGTAGGCAAGTTGCACACAGTGGAGCTAAA...ATGGTCTTGGTTGTGAAATAGATATCTGAAACACCGTGAGCTTAGAATAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTATTTTGATTCAGCTATaGTCTCTTTATCAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFILIQL*SLYQCP
Trigger: TGGACACTGATAAAGAGAGCATAGCTGAATCAAAAT...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TATCAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGTCTATTTTGATTCAGCTATaGTCTCTTTATCAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: YQDTASSRKLVESHFIVSILIQL*SLYQCP
Trigger: TGGACACTGATAAAGAGAGCATAGCTGAATCAAAAT...AGACACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGGACAACACTACTATTTaGTCGAAGCCATTGAAATTC +
Preference number: 4 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQDNTTI*SKPLKF
Trigger: GAATTTCAATGGCTTCGAGCAAATAGTAGTGTTGTC...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp CAACCACACTGGATGCAGAAAATAGTGCTGACTACATTTATTGAAGACTCTCTCAATCTTGTACACGGATaGCTCATCCTTAGGAAAATA +
Preference number: 4 (lower is better)
Translates to: QPHWMQKIVLTTFIEDSLNLVHG*LILRKI
Trigger: TATTTTCCTAAGGATGAGGCATCCGTGTACAAGATT...GAGAGAGTCTTCAATAAATGTAGTCAGCACTATTTTCTGCATCCAGTGTGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp CAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCTATCTGCCAGCTTCATaGTCAGAACCCTTAAAAACA +
Preference number: 4 (lower is better)
Translates to: QSVMGEFYIVFFVSNPIGYLPAS*SEPLKT
Trigger: TGTTTTTAAGGGTTCTGAGCATGAAGCTGGCAGATA...GCCAATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGAGACTGAGACACATTTaGATAACAGAAAGTGCCACA +
Preference number: 4 (lower is better)
Translates to: HLSFIQDLLQYYILPTSERLRHI*ITESAT
Trigger: TGTGGCACTTTCTGTTATCCAAATGTGTCTCAGTCT...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGAGACTGAGACACATTTaGATAACAGAAAGTGCCACA +
Preference number: 4 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVRLRHI*ITESAT
Trigger: TGTGGCACTTTCTGTTATCCAAATGTGTCTCAGTCT...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TCAACTACCATTCACAAGGTGCAGTTAAGAGACTTTTGGACAGTTCACAGTGTCGTTATCCCAGATTACTaGAGCTCTCTTAATAATCTT +
Preference number: 4 (lower is better)
Translates to: STTIHKVQLRDFWTVHSVVIPDY*SSLNNL
Trigger: AAGATTATTAAGAGAGCTCCAGTAATCTGGGATAAC...GACACTGTGAACTGTCCAAAAGTCTCTTAACTGCACCTTGTGAATGGTAGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGATTACAGGAGACAATTaGCCACGGCTTTACAAAAAG +
Preference number: 4 (lower is better)
Translates to: HLSFIQDLLQYYILPTSEITGDN*PRLYKK
Trigger: CTTTTTGTAAAGCCGTGGCCAATTGTCTCCTGTAAT...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp GACAATTGGCCACGGCTTTACAAAAAGCAGAATAACTGCCCCAAATTGAAATTAATTACAGGAGACAATTaGCCACGGCTTTACAAAAAG +
Preference number: 4 (lower is better)
Translates to: DNWPRLYKKQNNCPKLKLITGDN*PRLYKK
Trigger: CTTTTTGTAAAGCCGTGGCCAATTGTCTCCTGTAAT...TAATTTCAATTTGGGGCAGTTATTCTGCTTTTTGTAAAGCCGTGGCCAATTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTCAAAGTGTGATGGGTaGGTTTTACATAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: HLSFIQDLLQYYILPTSESKCDG*VLHSLL
Trigger: AAGAAGACTATGTAAAACTCACCCATCACACTTTGA...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp GACAATTGGCCACGGCTTTACAAAAAGCAGAATAACTGCCCCAAATTGAAATTATCAAAGTTAAACAGCTaGTGCAAAACTACAGAGAAG +
Preference number: 4 (lower is better)
Translates to: DNWPRLYKKQNNCPKLKLSKLNS*CKTTEK
Trigger: CTTCTCTGTAGTTTTGCATCAGCTGTTTAACTTTGA...TAATTTCAATTTGGGGCAGTTATTCTGCTTTTTGTAAAGCCGTGGCCAATTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp TTATTTATTCAGCTTAAACTAATGCCACAACCATCCCACTTGGAATCACTCCACTCAAAGTTAAACAGCTaGTGCAAAACTACAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LFIQLKLMPQPSHLESLHSKLNS*CKTTEK
Trigger: CTTCTCTGTAGTTTTGCATCAGCTGTTTAACTTTGA...GTGGAGTGATTCCAAGTGGGATGGTTGTGGCATTAGTTTAAGCTGAATAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR TCA 90 bp GACAATTGGCCACGGCTTTACAAAAAGCAGAATAACTGCCCCAAATTGAAATTAACAGGAACTGAGCTCTaGTCCAAACAATCAATAAAA +
Preference number: 4 (lower is better)
Translates to: DNWPRLYKKQNNCPKLKLTGTEL*SKQSIK
Trigger: TTTTATTGATTGTTTGGATCAGAGCTCAGTTCCTGT...TAATTTCAATTTGGGGCAGTTATTCTGCTTTTTGTAAAGCCGTGGCCAATTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGTACCTCTTTGTCTGCTaGACACATATTATGGTCTAT +
Preference number: 4 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVYLFVC*THIMVY
Trigger: ATAGACCATAATATGTGTGCAGCAGACAAAGAGGTA...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGAATCTTGTACACGGATaGCTCATCCTTAGGAAAATA +
Preference number: 4 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVNLVHG*LILRKI
Trigger: TATTTTCCTAAGGATGAGGCATCCGTGTACAAGATT...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp ATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTCGTCATACATTTCTCTaGAAATCTTGTACACGGATG +
Preference number: 4 (lower is better)
Translates to: ISLSYRICCNTIFFQPVSRHTFL*KSCTRM
Trigger: CATCCGTGTACAAGATTTGCAGAGAAATGTATGACG...ACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp ATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGGCATAACCACATATaGCATCTTCATCTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: ISLSYRICCNTIFFQPVSRHNHI*HLHLLG
Trigger: TCCTAGAAGATGAAGATGGCATATGTGGTTATGCCT...ACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACTTACATTATTCAAAGTaGCATTCTGAACCAACACCC +
Preference number: 4 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNLHYSK*HSEPTP
Trigger: GGGTGTTGGTTCAGAATGGCACTTTGAATAATGTAA...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR GCA 90 bp ATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTTCAAGCCCTCAAAAATaGAAACTTGGTTCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: ISLSYRICCNTIFFQPVSSSPQK*KLGSSF
Trigger: AAAGCTGGAACCAAGTTTGCATTTTTGAGGGCTTGA...ACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CAACCACACTGGATGCAGAAAATAGTGCTGACTACATTTATTGAAGACTCTCTCTTCGATGGACTCTACTaGAATTTCTTTAGAAACAAC +
Preference number: 4 (lower is better)
Translates to: QPHWMQKIVLTTFIEDSLFDGLY*NFFRNN
Trigger: GTTGTTTCTAAAGAAATTCCAGTAGAGTCCATCGAA...GAGAGAGTCTTCAATAAATGTAGTCAGCACTATTTTCTGCATCCAGTGTGGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CTTTTTATTCTAAGCTCACGGTGTTTCAGATATCTATTTCACAACCAAGACCATTTGTTACTACGGTTGTaGCATTTAAAGAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LFILSSRCFRYLFHNQDHLLLRL*HLKRVL
Trigger: CAGCACCCTCTTTAAATGCCACAACCGTAGTAACAA...ATGGTCTTGGTTGTGAAATAGATATCTGAAACACCGTGAGCTTAGAATAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CCA 90 bp TCTCAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTTTGTTACTACGGTTGTaGCATTTAAAGAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SQSVMGEFYIVFFVSNPILLLRL*HLKRVL
Trigger: CAGCACCCTCTTTAAATGCCACAACCGTAGTAACAA...AATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CAACCACACTGGATGCAGAAAATAGTGCTGACTACATTTATTGAAGACTCTCTCTGTTTCGAATCCAATTaGCTGATTTGTTACCATTCT +
Preference number: 4 (lower is better)
Translates to: QPHWMQKIVLTTFIEDSLCFESN*LICYHS
Trigger: AGAATGGTAACAAATCAGCCAATTGGATTCGAAACA...GAGAGAGTCTTCAATAAATGTAGTCAGCACTATTTTCTGCATCCAGTGTGGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CTTTTTATTCTAAGCTCACGGTGTTTCAGATATCTATTTCACAACCAAGACCATAGAAGAGATTATTCCTaGTGCACCTACCTAACCACT +
Preference number: 4 (lower is better)
Translates to: LFILSSRCFRYLFHNQDHRRDYS*CTYLTT
Trigger: AGTGGTTAGGTAGGTGCACCAGGAATAATCTCTTCT...ATGGTCTTGGTTGTGAAATAGATATCTGAAACACCGTGAGCTTAGAATAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR GCA 90 bp TCTCAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTTATCTCATATTCTCGTaGAGCAGAGATGAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: SQSVMGEFYIVFFVSNPIYLIFS*SRDESH
Trigger: ATGACTCTCATCTCTGCTGCACGAGAATATGAGATA...AATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCGTTATCCCAGATTACTaGAGCTCTCTTAATAATCTT +
Preference number: 4 (lower is better)
Translates to: QSVMGEFYIVFFVSNPIGVIPDY*SSLNNL
Trigger: AAGATTATTAAGAGAGCTCCAGTAATCTGGGATAAC...GCCAATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCTATAACCACATCCTTTaGAAATCCTTCCATTTTTGC +
Preference number: 4 (lower is better)
Translates to: QSVMGEFYIVFFVSNPIGYNHIL*KSFHFC
Trigger: GCAAAAATGGAAGGATTTCCAAAGGATGTGGTTATA...GCCAATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp TTATTTATTCAGCTTAAACTAATGCCACAACCATCCCACTTGGAATCACTCCACTATAACCACATCCTTTaGAAATCCTTCCATTTTTGC +
Preference number: 4 (lower is better)
Translates to: LFIQLKLMPQPSHLESLHYNHIL*KSFHFC
Trigger: GCAAAAATGGAAGGATTTCCAAAGGATGTGGTTATA...GTGGAGTGATTCCAAGTGGGATGGTTGTGGCATTAGTTTAAGCTGAATAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTGTTTCGAATCCAATTaGCTGATTTGTTACCATTCT +
Preference number: 4 (lower is better)
Translates to: HLSFIQDLLQYYILPTSECFESN*LICYHS
Trigger: AGAATGGTAACAAATCAGCCAATTGGATTCGAAACA...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp GGAGTCACATTTCATAGTGTCTCATCTCCAAATCAGATAAAAGTGGTATACAGGTATACAGGCAGAAAGTaGAAAATCTCACTACTACTT +
Preference number: 4 (lower is better)
Translates to: GVTFHSVSSPNQIKVVYRYTGRK*KISLLL
Trigger: AAGTAGTAGTGAGATTTTCCACTTTCTGCCTGTATA...CCTGTATACCACTTTTATCTGATTTGGAGATGAGACACTATGAAATGTGACTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CCA 90 bp ATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTGTTATCCCAGATTACTaGAGCTCTCTTAATAATCTT +
Preference number: 4 (lower is better)
Translates to: ISLSYRICCNTIFFQPVSVIPDY*SSLNNL
Trigger: AAGATTATTAAGAGAGCTCCAGTAATCTGGGATAAC...ACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CCA 90 bp CTTTTTATTCTAAGCTCACGGTGTTTCAGATATCTATTTCACAACCAAGACCATGTTATCCCAGATTACTaGAGCTCTCTTAATAATCTT +
Preference number: 4 (lower is better)
Translates to: LFILSSRCFRYLFHNQDHVIPDY*SSLNNL
Trigger: AAGATTATTAAGAGAGCTCCAGTAATCTGGGATAAC...ATGGTCTTGGTTGTGAAATAGATATCTGAAACACCGTGAGCTTAGAATAAAAAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS GCA 90 bp GGGGTTGTCTTCTCCGGGTGCCGGAGCTGCCGGCGGCTCCAGCGATaGCCCCGCAGAGGCGGCAGGGTTGGAGCTGAGCTCGCTCTCCCG +
Preference number: 5 (lower is better)
Translates to: GVVFSGCRSCRRLQR*PRRGGRVGAELALP
Trigger: CGGGAGAGCGAGCTCAGCTCCAACCCTGCCGCCTCTGCGGGGGCATCGCTGGAGCCGCCGGCAGCTCCGGCACCCGGAGAAGACAACCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS GCA 90 bp CCCTCCCCCTCTGCCCTTCCCCCTCCCTCTCCGCAGGGACCCGAATaGCCGGATGAGAAGGGCGGCGGCACCGGCGCGAGCCCTTTGTCA +
Preference number: 5 (lower is better)
Translates to: PSPSALPPPSPQGPE*PDEKGGGTGASPLS
Trigger: TGACAAAGGGCTCGCGCCGGTGCCGCCGCCCTTCTCATCCGGGCATTCGGGTCCCTGCGGAGAGGGAGGGGGAAGGGCAGAGGGGGAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS CCA 90 bp GGGTCCTCCTCGACCTCTGTCCGTTGGGGCACCGGCCCGGAGCCCTaGAGAGGGCTTCAGCTCCAAGTGTGCGCCCCTCCGGCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: GSSSTSVRWGTGPEP*RGLQLQVCAPPAPS
Trigger: GGAAGGAGCCGGAGGGGCGCACACTTGGAGCTGAAGCCCTCTCCAGGGCTCCGGGCCGGTGCCCCAACGGACAGAGGTCGAGGAGGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS TCA 90 bp CCGGCGGCTCCAGCGATGCCCCCGCAGAGGCGGCAGGGTTGGAGCTaGGCTCGCTCTCCCGCTCCTCCAACGTCGCTTGACTCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: PAAPAMPPQRRQGWS*ARSPAPPTSLDSPS
Trigger: AGAAGGAGAGTCAAGCGACGTTGGAGGAGCGGGAGAGCGAGCTCAGCTCCAACCCTGCCGCCTCTGCGGGGGCATCGCTGGAGCCGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS TCA 90 bp GCAGGGTTGGAGCTGAGCTCGCTCTCCCGCTCCTCCAACGTCGCTTaGCTCTCCTTCTGCACCATCCTCCTGCCCCCGGCCGCTGCCACC +
Preference number: 5 (lower is better)
Translates to: AGLELSSLSRSSNVA*LSFCTILLPPAAAT
Trigger: GGTGGCAGCGGCCGGGGGCAGGAGGATGGTGCAGAAGGAGAGTCAAGCGACGTTGGAGGAGCGGGAGAGCGAGCTCAGCTCCAACCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS GCA 90 bp TCTTCCGCTGTTTCCCCTCCAAGCCCCGAGCTCTCCCTCTGCTGCTaGCTCCACCGCCCGCTTCCTGTTTATCCGCACTGCGCTTGCGCT +
Preference number: 5 (lower is better)
Translates to: SSAVSPPSPELSLCC*LHRPLPVYPHCACA
Trigger: AGCGCAAGCGCAGTGCGGATAAACAGGAAGCGGGCGGTGGAGGCAGCAGCAGAGGGAGAGCTCGGGGCTTGGAGGGGAAACAGCGGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439817.5
CDS GCA 90 bp AGGTCTTCCGCTGTTTCCCCTCCAAGCCCCGAGCTCTCCCTCTGCTaGTGCCTCCACCGCCCGCTTCCTGTTTATCCGCACTGCGCTTGC +
Preference number: 5 (lower is better)
Translates to: RSSAVSPPSPELSLC*CLHRPLPVYPHCAC
Trigger: GCAAGCGCAGTGCGGATAAACAGGAAGCGGGCGGTGGAGGCAGCAGCAGAGGGAGAGCTCGGGGCTTGGAGGGGAAACAGCGGAAGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439817.5
CDS-3UTR CAA 90 bp CACCAGAATAGCCTTACACTAAAGCTCGCATGCGCACAGGGCTGGGAGGATGGCCCAGCCCCGGCGGGGTaGTCTTCTCCGGGTGCCGGA +
Preference number: 5 (lower is better)
Translates to: HQNSLTLKLACAQGWEDGPAPAG*SSPGAG
Trigger: TCCGGCACCCGGAGAAGACAACCCCGCCGGGGCTGG...GCCATCCTCCCAGCCCTGTGCGCATGCGAGCTTTAGTGTAAGGCTATTCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS TCA 90 bp GGCTTTAAGCTGGGGCGCCAGAAGCCTAAGCGGAGAGCGAGGCTGTaGCCTCTCGTTCCCTGGAAGAAGACGGCCAAGGGTCCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: GFKLGRQKPKRRARL*PLVPWKKTAKGPVL
Trigger: GAGGACAGGACCCTTGGCCGTCTTCTTCCAGGGAACGAGAGGTCACAGCCTCGCTCTCCGCTTAGGCTTCTGGCGCCCCAGCTTAAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS GCA 90 bp CCCTGGAAGAAGACGGCCAAGGGTCCTGTCCTCGTTCTCTGCCTCTaGTGCCCTCCCGATAATCTTAGGTCTTCCGCTGTTTCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: PWKKTAKGPVLVLCL*CPPDNLRSSAVSPP
Trigger: TGGAGGGGAAACAGCGGAAGACCTAAGATTATCGGGAGGGCAGCAGAGGCAGAGAACGAGGACAGGACCCTTGGCCGTCTTCTTCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS GCA 90 bp TGGAAGAAGACGGCCAAGGGTCCTGTCCTCGTTCTCTGCCTCTGCTaGCCTCCCGATAATCTTAGGTCTTCCGCTGTTTCCCCTCCAAGC +
Preference number: 5 (lower is better)
Translates to: WKKTAKGPVLVLCLC*PPDNLRSSAVSPPS
Trigger: GCTTGGAGGGGAAACAGCGGAAGACCTAAGATTATCGGGAGGGCAGCAGAGGCAGAGAACGAGGACAGGACCCTTGGCCGTCTTCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS GCA 90 bp CTCGTTCCCTGGAAGAAGACGGCCAAGGGTCCTGTCCTCGTTCTCTaGCTCTGCTGCCCTCCCGATAATCTTAGGTCTTCCGCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: LVPWKKTAKGPVLVL*LCCPPDNLRSSAVS
Trigger: GGAAACAGCGGAAGACCTAAGATTATCGGGAGGGCAGCAGAGGCAGAGAACGAGGACAGGACCCTTGGCCGTCTTCTTCCAGGGAACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS-3UTR CAA 90 bp AGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACACCAGCCCCGGCGGGGTaGTCTTCTCCGGGTGCCGGA +
Preference number: 5 (lower is better)
Translates to: SPCKRSQHLTQDSKRKPTPAPAG*SSPGAG
Trigger: TCCGGCACCCGGAGAAGACAACCCCGCCGGGGCTGG...TGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS TCA 90 bp GGTCTCGAATTCCTGGGCTCGAGTGATCCTTCTATCTCGGCCTCCTaGAGTGCTAGAATTACAAGTGTGTGCTGCCGTGCCTGGCCACCG +
Preference number: 5 (lower is better)
Translates to: GLEFLGSSDPSISAS*SARITSVCCRAWPP
Trigger: CGGTGGCCAGGCACGGCAGCACACACTTGTAATTCTAGCACTTCAGGAGGCCGAGATAGAAGGATCACTCGAGCCCAGGAATTCGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462994.1
CDS GCA 90 bp CCTTCTGTTGGCCAGGCTGGAGAGGGGCAGGCATTCTCCCTCGCGTaGACGCGCTCTCTCTCTCTCTCTCTCTCTTTCCCTATTTATATC +
Preference number: 5 (lower is better)
Translates to: PSVGQAGEGQAFSLA*TRSLSLSLSFPIYI
Trigger: GATATAAATAGGGAAAGAGAGAGAGAGAGAGAGAGAGCGCGTGCACGCGAGGGAGAATGCCTGCCCCTCTCCAGCCTGGCCAACAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462994.1
CDS-3UTR CAA 90 bp CACCAGAATAGCCTTACACTAAAGCTCGCATGCGCACAGGGCTGGGAGGATGGCGAGGATGGCTTCCTCTaGCCAGGCCCTTTAGGTCAT +
Preference number: 5 (lower is better)
Translates to: HQNSLTLKLACAQGWEDGEDGFL*PGPLGH
Trigger: ATGACCTAAAGGGCCTGGCAAGAGGAAGCCATCCTC...GCCATCCTCCCAGCCCTGTGCGCATGCGAGCTTTAGTGTAAGGCTATTCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp CAACCACACTGGATGCAGAAAATAGTGCTGACTACATTTATTGAAGACTCTCTCCCAGCCCCGGCGGGGTaGTCTTCTCCGGGTGCCGGA +
Preference number: 5 (lower is better)
Translates to: QPHWMQKIVLTTFIEDSLPAPAG*SSPGAG
Trigger: TCCGGCACCCGGAGAAGACAACCCCGCCGGGGCTGG...GAGAGAGTCTTCAATAAATGTAGTCAGCACTATTTTCTGCATCCAGTGTGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGCCAGCCCCGGCGGGGTaGTCTTCTCCGGGTGCCGGA +
Preference number: 5 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQPAPAG*SSPGAG
Trigger: TCCGGCACCCGGAGAAGACAACCCCGCCGGGGCTGG...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTGCAGAGGCGGCAGGGTaGGAGCTGAGCTCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFAEAAG*ELSSLS
Trigger: GGAGAGCGAGCTCAGCTCCAACCCTGCCGCCTCTGC...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCACTTTGCCTCAGAGAGTTCCTaGTCACCATTTGGCTTGGTA +
Preference number: 5 (lower is better)
Translates to: LGSRTPNGHGLRLGGRHFASESS*SPFGLV
Trigger: TACCAAGCCAAATGGTGACAAGGAACTCTCTGAGGC...AAAGTGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp CACCAGAATAGCCTTACACTAAAGCTCGCATGCGCACAGGGCTGGGAGGATGGCCTGTTGTTACTACGGTaGTGGCATTTAAAGAGGGTG +
Preference number: 5 (lower is better)
Translates to: HQNSLTLKLACAQGWEDGLLLLR*WHLKRV
Trigger: CACCCTCTTTAAATGCCACAACCGTAGTAACAACAG...GCCATCCTCCCAGCCCTGTGCGCATGCGAGCTTTAGTGTAAGGCTATTCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp TTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCACTTTGGCACAAACTGCTCCTaGTTTGTCTGTTCATCAGTT +
Preference number: 5 (lower is better)
Translates to: LGSRTPNGHGLRLGGRHFGTNCS*FVCSSV
Trigger: AACTGATGAACAGACAAACAAGGAGCAGTTTGTGCC...AAAGTGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS CCA 90 bp CTCTCTCTTTCCCTATTTATATCGTCAGGGCTGGTCTCGAATTCCTaGGCTCGAGTGATCCTTCTATCTCGGCCTCCTGAAGTGCTAGAA +
Preference number: 5 (lower is better)
Translates to: LSLSLFISSGLVSNS*ARVILLSRPPEVLE
Trigger: TTCTAGCACTTCAGGAGGCCGAGATAGAAGGATCACTCGAGCCCAGGAATTCGAGACCAGCCCTGACGATATAAATAGGGAAAGAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462994.1
CDS-3UTR CAA 90 bp GACCAATCAGTCCCTGAACCCTACCTGACATGTCAAATCCAACATTTCACATGCCTCCTCCAACGTCGCTaGACTCTCCTTCTGCACCAT +
Preference number: 5 (lower is better)
Translates to: DQSVPEPYLTCQIQHFTCLLQRR*TLLLHH
Trigger: ATGGTGCAGAAGGAGAGTCAAGCGACGTTGGAGGAG...GCATGTGAAATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGACTGATTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS TCA 90 bp CACATATGCCATCTTCATCTTCTAGGACAAAGCAGTAATCCAGGCTaGGGGAAAGCAGCCCTCCTACTAACCTGCTCAGAAGGAAAGAGG +
Preference number: 5 (lower is better)
Translates to: HICHLHLLGQSSNPG*GKAALLLTCSEGKR
Trigger: CCTCTTTCCTTCTGAGCAGGTTAGTAGGAGGGCTGCTTTCCCTCAGCCTGGATTACTGCTTTGTCCTAGAAGATGAAGATGGCATATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461645.1
CDS-3UTR CAA 90 bp AGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACACACATCTCTTCAAACTaGGCTGCTCGTGACCGCCAT +
Preference number: 5 (lower is better)
Translates to: SPCKRSQHLTQDSKRKPTHISSN*AARDRH
Trigger: ATGGCGGTCACGAGCAGCCAAGTTTGAAGAGATGTG...TGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp GTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTCATACCCACAACCATCCCACTaGGAATCACTCCACCCTGAC +
Preference number: 5 (lower is better)
Translates to: VSAPNTRLKKEAHISLSYPQPSH*ESLHPD
Trigger: GTCAGGGTGGAGTGATTCCAAGTGGGATGGTTGTGG...GTATGAAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp ATAAGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCCCACAACCATCCCACTaGGAATCACTCCACCCTGAC +
Preference number: 5 (lower is better)
Translates to: ISPCKRSQHLTQDSKRKPPQPSH*ESLHPD
Trigger: GTCAGGGTGGAGTGATTCCAAGTGGGATGGTTGTGG...GGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS GCA 90 bp CTTTTCTTCTTCCTTGGTCAGAGTAGTAGGCTCACCACTCAAGGCTaGTCCCTGGCTCATAATGGGCTCCTGATAAACTGTTGTTACTAC +
Preference number: 5 (lower is better)
Translates to: LFFFLGQSSRLTTQG*SLAHNGLLINCCYY
Trigger: GTAGTAACAACAGTTTATCAGGAGCCCATTATGAGCCAGGGAGCAGCCTTGAGTGGTGAGCCTACTACTCTGACCAAGGAAGAAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS-3UTR CAA 90 bp GACCAATCAGTCCCTGAACCCTACCTGACATGTCAAATCCAACATTTCACATGCTCTGTGGATCTTCCTTaGTACGGGCCCAGAAACAGT +
Preference number: 5 (lower is better)
Translates to: DQSVPEPYLTCQIQHFTCSVDLP*YGPRNS
Trigger: ACTGTTTCTGGGCCCGTACAAAGGAAGATCCACAGA...GCATGTGAAATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGACTGATTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp ACTACTATGAAAACTATGACATGTCAGTCAGCCTTGCTGCCTGCTGTGTGCTGTTCTGTGGATCTTCCTTaGTACGGGCCCAGAAACAGT +
Preference number: 5 (lower is better)
Translates to: TTMKTMTCQSALLPAVCCSVDLP*YGPRNS
Trigger: ACTGTTTCTGGGCCCGTACAAAGGAAGATCCACAGA...ACAGCACACAGCAGGCAGCAAGGCTGACTGACATGTCATAGTTTTCATAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp GTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTCATACCACATCTCTTCAAACTaGGCTGCTCGTGACCGCCAT +
Preference number: 5 (lower is better)
Translates to: VSAPNTRLKKEAHISLSYHISSN*AARDRH
Trigger: ATGGCGGTCACGAGCAGCCAAGTTTGAAGAGATGTG...GTATGAAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCACTTTCAAACAAATGCACATTaGTCCCTACAAAGTACAACA +
Preference number: 5 (lower is better)
Translates to: LGSRTPNGHGLRLGGRHFQTNAH*SLQSTT
Trigger: TGTTGTACTTTGTAGGGACAAATGTGCATTTGTTTG...AAAGTGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp AAAATTAGGCTCTCGTACCCCAAATGGTCATGGCCTACGCCTAGGTGGGAGGCAGTCAATTGTAGGCTTTaGCCACAAACAAATGCACAT +
Preference number: 5 (lower is better)
Translates to: KIRLSYPKWSWPTPRWEAVNCRL*PQTNAH
Trigger: ATGTGCATTTGTTTGTGGCAAAAGCCTACAATTGAC...TGCCTCCCACCTAGGCGTAGGCCATGACCATTTGGGGTACGAGAGCCTAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS TCA 90 bp AAGGCCCAGGGTTCTTGGTCTCCAATTAAGAATTGTGCTGAAGAATaGCTACGACACCCTGTTGAGATCAGATCCAAGCGGAGAACGTTA +
Preference number: 5 (lower is better)
Translates to: KAQGSWSPIKNCAEE*LRHPVEIRSKRRTL
Trigger: TAACGTTCTCCGCTTGGATCTGATCTCAACAGGGTGTCGTAGTCATTCTTCAGCACAATTCTTAATTGGAGACCAAGAACCCTGGGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492204.1
CDS-3UTR CAA 90 bp AATGAAATGAAGTCCCTAGAGAAACTTGGCCATGCTGGTGCTTTTTACCAAGTTCTCCTCCAACGTCGCTaGACTCTCCTTCTGCACCAT +
Preference number: 5 (lower is better)
Translates to: NEMKSLEKLGHAGAFYQVLLQRR*TLLLHH
Trigger: ATGGTGCAGAAGGAGAGTCAAGCGACGTTGGAGGAG...AACTTGGTAAAAAGCACCAGCATGGCCAAGTTTCTCTAGGGACTTCATTTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp ACTACTATGAAAACTATGACATGTCAGTCAGCCTTGCTGCCTGCTGTGTGCTGTCCATTCATGTTTGATTaGTACCAGGTGGCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: TTMKTMTCQSALLPAVCCPFMFD*YQVARV
Trigger: CACCCTTGCCACCTGGTACAAATCAAACATGAATGG...ACAGCACACAGCAGGCAGCAAGGCTGACTGACATGTCATAGTTTTCATAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp GACCAATCAGTCCCTGAACCCTACCTGACATGTCAAATCCAACATTTCACATGCTTGCCTACTGCTGTATaGATGAGGCACACCAAACTC +
Preference number: 5 (lower is better)
Translates to: DQSVPEPYLTCQIQHFTCLPTAV*MRHTKL
Trigger: GAGTTTGGTGTGCCTCATCAATACAGCAGTAGGCAA...GCATGTGAAATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGACTGATTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361464.8
CDS-3UTR CAA 90 bp GACCAATCAGTCCCTGAACCCTACCTGACATGTCAAATCCAACATTTCACATGCGTGGTCCGTTTCTTCTaGTTTTTCCACCACCATGTC +
Preference number: 5 (lower is better)
Translates to: DQSVPEPYLTCQIQHFTCVVRFF*FFHHHV
Trigger: GACATGGTGGTGGAAAAACAAGAAGAAACGGACCAC...GCATGTGAAATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGACTGATTGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp ACTACTATGAAAACTATGACATGTCAGTCAGCCTTGCTGCCTGCTGTGTGCTGTGTGGTCCGTTTCTTCTaGTTTTTCCACCACCATGTC +
Preference number: 5 (lower is better)
Translates to: TTMKTMTCQSALLPAVCCVVRFF*FFHHHV
Trigger: GACATGGTGGTGGAAAAACAAGAAGAAACGGACCAC...ACAGCACACAGCAGGCAGCAAGGCTGACTGACATGTCATAGTTTTCATAGTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTCACATCTCTTCAAACTaGGCTGCTCGTGACCGCCAT +
Preference number: 5 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFHISSN*AARDRH
Trigger: ATGGCGGTCACGAGCAGCCAAGTTTGAAGAGATGTG...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TGCATACTCAAAGGCTTTGGTTGGAAGTCACTAGGTACCACTAGGTACAATGCTCAAGCCATCATGCTTTaGGCCACACTTGGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: CILKGFGWKSLGTTRYNAQAIML*ATLGSV
Trigger: AACTGACCCAAGTGTGGCCAAAAGCATGATGGCTTG...AGCATTGTACCTAGTGGTACCTAGTGACTTCCAACCAAAGCCTTTGAGTATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp GACCAATCAGTCCCTGAACCCTACCTGACATGTCAAATCCAACATTTCACATGCACTCAAAGGCTTTGGTaGGAAGTCACTAGGTACCAC +
Preference number: 5 (lower is better)
Translates to: DQSVPEPYLTCQIQHFTCTQRLW*EVTRYH
Trigger: GTGGTACCTAGTGACTTCCAACCAAAGCCTTTGAGT...GCATGTGAAATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGACTGATTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCTCCTCCAACGTCGCTaGACTCTCCTTCTGCACCAT +
Preference number: 5 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNLLQRR*TLLLHH
Trigger: ATGGTGCAGAAGGAGAGTCAAGCGACGTTGGAGGAG...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp GACAATTGGCCACGGCTTTACAAAAAGCAGAATAACTGCCCCAAATTGAAATTACTCCTCCAACGTCGCTaGACTCTCCTTCTGCACCAT +
Preference number: 5 (lower is better)
Translates to: DNWPRLYKKQNNCPKLKLLLQRR*TLLLHH
Trigger: ATGGTGCAGAAGGAGAGTCAAGCGACGTTGGAGGAG...TAATTTCAATTTGGGGCAGTTATTCTGCTTTTTGTAAAGCCGTGGCCAATTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp GTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTCATACCCATTCATGTTTGATTaGTACCAGGTGGCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: VSAPNTRLKKEAHISLSYPFMFD*YQVARV
Trigger: CACCCTTGCCACCTGGTACAAATCAAACATGAATGG...GTATGAAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp AGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACAACAAAGGCTTTTCATTaGGACCTGGCACAAACTGCT +
Preference number: 5 (lower is better)
Translates to: SPCKRSQHLTQDSKRKPTTKAFH*DLAQTA
Trigger: AGCAGTTTGTGCCAGGTCCAAATGAAAAGCCTTTGT...TGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp AATGAAATGAAGTCCCTAGAGAAACTTGGCCATGCTGGTGCTTTTTACCAAGTTCACATCTCTTCAAACTaGGCTGCTCGTGACCGCCAT +
Preference number: 5 (lower is better)
Translates to: NEMKSLEKLGHAGAFYQVHISSN*AARDRH
Trigger: ATGGCGGTCACGAGCAGCCAAGTTTGAAGAGATGTG...AACTTGGTAAAAAGCACCAGCATGGCCAAGTTTCTCTAGGGACTTCATTTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp TGCACATTTGTCCCTACAAAGTACAACATGCCTGAACCAACAGTCATTACAGGAGTCCTGTTGGCACAATaGGAGAGCCGAGTGAACATT +
Preference number: 5 (lower is better)
Translates to: CTFVPTKYNMPEPTVITGVLLAQ*ESRVNI
Trigger: AATGTTCACTCGGCTCTCCAATTGTGCCAACAGGAC...TCCTGTAATGACTGTTGGTTCAGGCATGTTGTACTTTGTAGGGACAAATGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTCATTTGCCCCATCAATaGGCAGCAAACGCTGGAACT +
Preference number: 5 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFHLPHQ*AANAGT
Trigger: AGTTCCAGCGTTTGCTGCCAATTGATGGGGCAAATG...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp ATAAGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCAGCCCTCCTACTAACTaGTCTCCAATAAGATCAGGC +
Preference number: 5 (lower is better)
Translates to: ISPCKRSQHLTQDSKRKPSPPTN*SPIRSG
Trigger: GCCTGATCTTATTGGAGACAAGTTAGTAGGAGGGCT...GGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TGCACATTTGTCCCTACAAAGTACAACATGCCTGAACCAACAGTCATTACAGGAGCCTCAGAGAGTTCCTaGTCACCATTTGGCTTGGTA +
Preference number: 5 (lower is better)
Translates to: CTFVPTKYNMPEPTVITGASESS*SPFGLV
Trigger: TACCAAGCCAAATGGTGACAAGGAACTCTCTGAGGC...TCCTGTAATGACTGTTGGTTCAGGCATGTTGTACTTTGTAGGGACAAATGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS TCA 90 bp TTCACTGTCAGTCATCACTACATCTTTTCTCACTCCATTCATGTTTaGTTTGTACCAGGTGGCAAGGGTGTGGATAGCAACGTAGTTGGC +
Preference number: 5 (lower is better)
Translates to: FTVSHHYIFSHSIHV*FVPGGKGVDSNVVG
Trigger: GCCAACTACGTTGCTATCCACACCCTTGCCACCTGGTACAAATCAAACATGAATGGAGTGAGAAAAGATGTAGTGATGACTGACAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000370094.7
CDS TCA 90 bp ACATGTCATAAAGAATTGTCCTGTTGGCACAATTGGAGAGCCGAGTaGACATTCCCATCACTAGTCCACACATCTCTTCAAACTTGGCTG +
Preference number: 5 (lower is better)
Translates to: TCHKELSCWHNWRAE*TFPSLVHTSLQTWL
Trigger: CAGCCAAGTTTGAAGAGATGTGTGGACTAGTGATGGGAATGTTCACTCGGCTCTCCAATTGTGCCAACAGGACAATTCTTTATGACATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
ENST00000482611.5
CDS TCA 90 bp AACTTGCCTACTCATCACTACATCTTTTCTCACTCCATTCATGTTTaGTTTGTACCAGGTGGCAAGGGTGTGGATAGCAACGTAGTTGGC +
Preference number: 5 (lower is better)
Translates to: NLPTHHYIFSHSIHV*FVPGGKGVDSNVVG
Trigger: GCCAACTACGTTGCTATCCACACCCTTGCCACCTGGTACAAATCAAACATGAATGGAGTGAGAAAAGATGTAGTGATGAGTAGGCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357797.9
ENST00000439817.5
CDS CCA 90 bp CATTCTTGTGGTCCGTTTCTTCTTGTTTTTCCACCACCATGTCCATaGGTTCTTCATCAGGCTGTTTCTTTTCTTCTTCCTTGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: HSCGPFLLVFPPPCP*VLHQAVSFLLPWSE
Trigger: CTCTGACCAAGGAAGAAGAAAAGAAACAGCCTGATGAAGAACCCATGGACATGGTGGTGGAAAAACAAGAAGAAACGGACCACAAGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
ENST00000482611.5
CDS CCA 90 bp ATGAAGACCTCAACTACCATTCACAAGGTGCAGTTAAGAGACTTTTaGACAGTTCACAGTGTCAACAAATGTCACAGGCTCCGACCAAGT +
Preference number: 5 (lower is better)
Translates to: MKTSTTIHKVQLRDF*TVHSVNKCHRLRPS
Trigger: ACTTGGTCGGAGCCTGTGACATTTGTTGACACTGTGAACTGTCCAAAAGTCTCTTAACTGCACCTTGTGAATGGTAGTTGAGGTCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
ENST00000462994.1
ENST00000482611.5
ENST00000494347.5
CDS-3UTR CAA 90 bp CAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGTCTCATGAGACTGAGACACATTaGGATAACAGAAAGTGCCAC +
Preference number: 5 (lower is better)
Translates to: QDTASSRKLVESHFIVSHETETH*DNRKCH
Trigger: GTGGCACTTTCTGTTATCCAAATGTGTCTCAGTCTC...ATGAGACACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTCTGTGGATCTTCCTTaGTACGGGCCCAGAAACAGT +
Preference number: 5 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQSVDLP*YGPRNS
Trigger: ACTGTTTCTGGGCCCGTACAAAGGAAGATCCACAGA...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TATCAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGTCTTTGCCTACTGCTGTATaGATGAGGCACACCAAACTC +
Preference number: 5 (lower is better)
Translates to: YQDTASSRKLVESHFIVSLPTAV*MRHTKL
Trigger: GAGTTTGGTGTGCCTCATCAATACAGCAGTAGGCAA...AGACACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp ATAAGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCCTGTTGTTACTACGGTaGTGGCATTTAAAGAGGGTG +
Preference number: 5 (lower is better)
Translates to: ISPCKRSQHLTQDSKRKPLLLLR*WHLKRV
Trigger: CACCCTCTTTAAATGCCACAACCGTAGTAACAACAG...GGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp GTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTCATACGCTCCTGATAAACTGTaGTTACTACGGTTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: VSAPNTRLKKEAHISLSYAPDKL*LLRLWH
Trigger: ATGCCACAACCGTAGTAACAACAGTTTATCAGGAGC...GTATGAAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp CAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGTCTCATGCTCCTGATAAACTGTaGTTACTACGGTTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: QDTASSRKLVESHFIVSHAPDKL*LLRLWH
Trigger: ATGCCACAACCGTAGTAACAACAGTTTATCAGGAGC...ATGAGACACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp ACTACTATGAAAACTATGACATGTCAGTCAGCCTTGCTGCCTGCTGTGTGCTGTACATCTCTGGGGATTTaGATTCAGCTATGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: TTMKTMTCQSALLPAVCCTSLGI*IQLCSL
Trigger: AAGAGAGCATAGCTGAATCAAAATCCCCAGAGATGT...ACAGCACACAGCAGGCAGCAAGGCTGACTGACATGTCATAGTTTTCATAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp ATAAGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACAAAGGCTTTTCATTaGGACCTGGCACAAACTGCT +
Preference number: 5 (lower is better)
Translates to: ISPCKRSQHLTQDSKRKPTKAFH*DLAQTA
Trigger: AGCAGTTTGTGCCAGGTCCAAATGAAAAGCCTTTGT...GGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TGCATACTCAAAGGCTTTGGTTGGAAGTCACTAGGTACCACTAGGTACAATGCTGTTCCTTGTCACCATTaGGCTTGGTATACTTCTCCT +
Preference number: 5 (lower is better)
Translates to: CILKGFGWKSLGTTRYNAVPCHH*AWYTSP
Trigger: AGGAGAAGTATACCAAGCCAAATGGTGACAAGGAAC...AGCATTGTACCTAGTGGTACCTAGTGACTTCCAACCAAAGCCTTTGAGTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp AGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACAGCAGTTAAGAGACTTTaGGACAGTTCACAGTGTCAA +
Preference number: 5 (lower is better)
Translates to: SPCKRSQHLTQDSKRKPTAVKRL*DSSQCQ
Trigger: TTGACACTGTGAACTGTCCAAAAGTCTCTTAACTGC...TGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS CCA 90 bp TATTTGCTCGAAGCCATTGAAATTCCCGTAACATCTGTGCTCCTTTaGGTCCATGCTCGTAAGGAAGGTAGAATAGATCAGCAAGTAACT +
Preference number: 5 (lower is better)
Translates to: YLLEAIEIPVTSVLL*VHARKEGRIDQQVT
Trigger: AGTTACTTGCTGATCTATTCTACCTTCCTTACGAGCATGGACCCAAAGGAGCACAGATGTTACGGGAATTTCAATGGCTTCGAGCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
ENST00000482611.5
CDS-3UTR CAA 90 bp TCAACTACCATTCACAAGGTGCAGTTAAGAGACTTTTGGACAGTTCACAGTGTCGAGACTGAGACACATTaGGATAACAGAAAGTGCCAC +
Preference number: 5 (lower is better)
Translates to: STTIHKVQLRDFWTVHSVETETH*DNRKCH
Trigger: GTGGCACTTTCTGTTATCCAAATGTGTCTCAGTCTC...GACACTGTGAACTGTCCAAAAGTCTCTTAACTGCACCTTGTGAATGGTAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGTCTGTGGATCTTCCTTaGTACGGGCCCAGAAACAGT +
Preference number: 5 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVSVDLP*YGPRNS
Trigger: ACTGTTTCTGGGCCCGTACAAAGGAAGATCCACAGA...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGCCATTCATGTTTGATTaGTACCAGGTGGCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQPFMFD*YQVARV
Trigger: CACCCTTGCCACCTGGTACAAATCAAACATGAATGG...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp ATAAGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCTCACTCCATTCATGTTaGATTTGTACCAGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: ISPCKRSQHLTQDSKRKPSLHSC*ICTRWQ
Trigger: TTGCCACCTGGTACAAATCAAACATGAATGGAGTGA...GGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TGCACATTTGTCCCTACAAAGTACAACATGCCTGAACCAACAGTCATTACAGGAGCTCCTGATAAACTGTaGTTACTACGGTTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: CTFVPTKYNMPEPTVITGAPDKL*LLRLWH
Trigger: ATGCCACAACCGTAGTAACAACAGTTTATCAGGAGC...TCCTGTAATGACTGTTGGTTCAGGCATGTTGTACTTTGTAGGGACAAATGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp ATAAGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCCTTTATCAGTGTCCATaGGTTTCAATTCCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: ISPCKRSQHLTQDSKRKPLYQCP*VSIPLP
Trigger: TGGCAGAGGAATTGAAACCAATGGACACTGATAAAG...GGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp GTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTCATACCTTTATCAGTGTCCATaGGTTTCAATTCCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: VSAPNTRLKKEAHISLSYLYQCP*VSIPLP
Trigger: TGGCAGAGGAATTGAAACCAATGGACACTGATAAAG...GTATGAAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp GTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTCATACACATCTCTGGGGATTTaGATTCAGCTATGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: VSAPNTRLKKEAHISLSYTSLGI*IQLCSL
Trigger: AAGAGAGCATAGCTGAATCAAAATCCCCAGAGATGT...GTATGAAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp CAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGTCTCATACTAATACAATCTTCTaGCATGGACATCTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: QDTASSRKLVESHFIVSHTNTIF*HGHLWG
Trigger: TCCCCAGAGATGTCCATGCAAGAAGATTGTATTAGT...ATGAGACACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTGGCACAAACTGCTCCTaGTTTGTCTGTTCATCAGTT +
Preference number: 5 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFGTNCS*FVCSSV
Trigger: AACTGATGAACAGACAAACAAGGAGCAGTTTGTGCC...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp AAGTGGTATACAGGGTTCCATCCAGAAAGCATTCAGTCAGAGCAAGTTAAAGTCACAAAGGCTTTTCATTaGGACCTGGCACAAACTGCT +
Preference number: 5 (lower is better)
Translates to: KWYTGFHPESIQSEQVKVTKAFH*DLAQTA
Trigger: AGCAGTTTGTGCCAGGTCCAAATGAAAAGCCTTTGT...GACTTTAACTTGCTCTGACTGAATGCTTTCTGGATGGAACCCTGTATACCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACGTCCTGTTGGCACAATaGGAGAGCCGAGTGAACATT +
Preference number: 5 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNVLLAQ*ESRVNI
Trigger: AATGTTCACTCGGCTCTCCAATTGTGCCAACAGGAC...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TTATTTATTCAGCTTAAACTAATGCCACAACCATCCCACTTGGAATCACTCCACCATTTGCCCCATCAATaGGCAGCAAACGCTGGAACT +
Preference number: 5 (lower is better)
Translates to: LFIQLKLMPQPSHLESLHHLPHQ*AANAGT
Trigger: AGTTCCAGCGTTTGCTGCCAATTGATGGGGCAAATG...GTGGAGTGATTCCAAGTGGGATGGTTGTGGCATTAGTTTAAGCTGAATAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TGCACATTTGTCCCTACAAAGTACAACATGCCTGAACCAACAGTCATTACAGGAATTTCTCTGCAAATCTaGTACACGGATGCCTCATCC +
Preference number: 5 (lower is better)
Translates to: CTFVPTKYNMPEPTVITGISLQI*YTDASS
Trigger: GGATGAGGCATCCGTGTACAAGATTTGCAGAGAAAT...TCCTGTAATGACTGTTGGTTCAGGCATGTTGTACTTTGTAGGGACAAATGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGGCCTCAGAGAGTTCCTaGTCACCATTTGGCTTGGTA +
Preference number: 5 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVASESS*SPFGLV
Trigger: TACCAAGCCAAATGGTGACAAGGAACTCTCTGAGGC...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp CAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCCAAGCCATCATGCTTTaGGCCACACTTGGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: QSVMGEFYIVFFVSNPIGQAIML*ATLGSV
Trigger: AACTGACCCAAGTGTGGCCAAAAGCATGATGGCTTG...GCCAATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGCAAGCCATCATGCTTTaGGCCACACTTGGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: HLSFIQDLLQYYILPTSEQAIML*ATLGSV
Trigger: AACTGACCCAAGTGTGGCCAAAAGCATGATGGCTTG...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp AACCTTCTCTCCTTTCTTCTCACCTATTTAGTGCATACTCAAAGGCTTTGGTTGACTCAAAGGCTTTGGTaGGAAGTCACTAGGTACCAC +
Preference number: 5 (lower is better)
Translates to: NLLSFLLTYLVHTQRLWLTQRLW*EVTRYH
Trigger: GTGGTACCTAGTGACTTCCAACCAAAGCCTTTGAGT...CAACCAAAGCCTTTGAGTATGCACTAAATAGGTGAGAAGAAAGGAGAGAAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp CTTTTTATTCTAAGCTCACGGTGTTTCAGATATCTATTTCACAACCAAGACCATACATGTCAGTCAGCCTaGCTGCCTGCTGTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: LFILSSRCFRYLFHNQDHTCQSA*LPAVCC
Trigger: ACAGCACACAGCAGGCAGCAAGGCTGACTGACATGT...ATGGTCTTGGTTGTGAAATAGATATCTGAAACACCGTGAGCTTAGAATAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS TCA 90 bp TGTGGATACTTCCTTGGGGTTAGAAAAAGTGATATCCAATCCAGGTaGGATCGCATAGATGAACTCTATCTCATATTCTCGTGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: CGYFLGVRKSDIQSR*DRIDELYLIFSCSR
Trigger: TCTGCTGCACGAGAATATGAGATAGAGTTCATCTATGCGATCTCACCTGGATTGGATATCACTTTTTCTAACCCCAAGGAAGTATCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000429860.1
ENST00000439817.5
CDS-3UTR CAA 90 bp AGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACAGTTTGTAGTCATCTTTaGGGGCATACAAGTATGTAT +
Preference number: 5 (lower is better)
Translates to: SPCKRSQHLTQDSKRKPTVCSHL*GHTSMY
Trigger: ATACATACTTGTATGCCCCAAAAGATGACTACAAAC...TGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp CAACCACACTGGATGCAGAAAATAGTGCTGACTACATTTATTGAAGACTCTCTCGAGACTGAGACACATTaGGATAACAGAAAGTGCCAC +
Preference number: 5 (lower is better)
Translates to: QPHWMQKIVLTTFIEDSLETETH*DNRKCH
Trigger: GTGGCACTTTCTGTTATCCAAATGTGTCTCAGTCTC...GAGAGAGTCTTCAATAAATGTAGTCAGCACTATTTTCTGCATCCAGTGTGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTTCTTTAGAAACAACTTaGGGACCTGTCCAAAGCACT +
Preference number: 5 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFSLETT*GPVQST
Trigger: AGTGCTTTGGACAGGTCCCAAAGTTGTTTCTAAAGA...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp AAGTGGTATACAGGGTTCCATCCAGAAAGCATTCAGTCAGAGCAAGTTAAAGTCTCTTTAGAAACAACTTaGGGACCTGTCCAAAGCACT +
Preference number: 5 (lower is better)
Translates to: KWYTGFHPESIQSEQVKVSLETT*GPVQST
Trigger: AGTGCTTTGGACAGGTCCCAAAGTTGTTTCTAAAGA...GACTTTAACTTGCTCTGACTGAATGCTTTCTGGATGGAACCCTGTATACCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGCCATTCATGTTTGATTaGTACCAGGTGGCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: HLSFIQDLLQYYILPTSEPFMFD*YQVARV
Trigger: CACCCTTGCCACCTGGTACAAATCAAACATGAATGG...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp GACAATTGGCCACGGCTTTACAAAAAGCAGAATAACTGCCCCAAATTGAAATTATCCACTGTGTGCAACTaGCCTACTGCTGTATTGATG +
Preference number: 5 (lower is better)
Translates to: DNWPRLYKKQNNCPKLKLSTVCN*PTAVLM
Trigger: CATCAATACAGCAGTAGGCAAGTTGCACACAGTGGA...TAATTTCAATTTGGGGCAGTTATTCTGCTTTTTGTAAAGCCGTGGCCAATTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361464.8
CDS-3UTR CAA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTTTCTTTTCTTCTTCCTaGGTCAGAGTAGTAGGCTCA +
Preference number: 5 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFFFSSS*VRVVGS
Trigger: TGAGCCTACTACTCTGACCAAGGAAGAAGAAAAGAA...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp CAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCGTGGTCCGTTTCTTCTaGTTTTTCCACCACCATGTC +
Preference number: 5 (lower is better)
Translates to: QSVMGEFYIVFFVSNPIGVVRFF*FFHHHV
Trigger: GACATGGTGGTGGAAAAACAAGAAGAAACGGACCAC...GCCAATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp GACAATTGGCCACGGCTTTACAAAAAGCAGAATAACTGCCCCAAATTGAAATTAGTGGTCCGTTTCTTCTaGTTTTTCCACCACCATGTC +
Preference number: 5 (lower is better)
Translates to: DNWPRLYKKQNNCPKLKLVVRFF*FFHHHV
Trigger: GACATGGTGGTGGAAAAACAAGAAGAAACGGACCAC...TAATTTCAATTTGGGGCAGTTATTCTGCTTTTTGTAAAGCCGTGGCCAATTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TCAACTACCATTCACAAGGTGCAGTTAAGAGACTTTTGGACAGTTCACAGTGTCCTTTATCAGTGTCCATaGGTTTCAATTCCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: STTIHKVQLRDFWTVHSVLYQCP*VSIPLP
Trigger: TGGCAGAGGAATTGAAACCAATGGACACTGATAAAG...GACACTGTGAACTGTCCAAAAGTCTCTTAACTGCACCTTGTGAATGGTAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp AAGTGGTATACAGGGTTCCATCCAGAAAGCATTCAGTCAGAGCAAGTTAAAGTCCTTTATCAGTGTCCATaGGTTTCAATTCCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: KWYTGFHPESIQSEQVKVLYQCP*VSIPLP
Trigger: TGGCAGAGGAATTGAAACCAATGGACACTGATAAAG...GACTTTAACTTGCTCTGACTGAATGCTTTCTGGATGGAACCCTGTATACCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTACTAATACAATCTTCTaGCATGGACATCTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFTNTIF*HGHLWG
Trigger: TCCCCAGAGATGTCCATGCAAGAAGATTGTATTAGT...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTGTCTGTTCATCAGTTaGCATGGGGGCAATGTCACT +
Preference number: 5 (lower is better)
Translates to: HLSFIQDLLQYYILPTSECLFIS*HGGNVT
Trigger: AGTGACATTGCCCCCATGCAAACTGATGAACAGACA...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp GGAGTCACATTTCATAGTGTCTCATCTCCAAATCAGATAAAAGTGGTATACAGGTGTCTGTTCATCAGTTaGCATGGGGGCAATGTCACT +
Preference number: 5 (lower is better)
Translates to: GVTFHSVSSPNQIKVVYRCLFIS*HGGNVT
Trigger: AGTGACATTGCCCCCATGCAAACTGATGAACAGACA...CCTGTATACCACTTTTATCTGATTTGGAGATGAGACACTATGAAATGTGACTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp TTATTTATTCAGCTTAAACTAATGCCACAACCATCCCACTTGGAATCACTCCACTGTCTGTTCATCAGTTaGCATGGGGGCAATGTCACT +
Preference number: 5 (lower is better)
Translates to: LFIQLKLMPQPSHLESLHCLFIS*HGGNVT
Trigger: AGTGACATTGCCCCCATGCAAACTGATGAACAGACA...GTGGAGTGATTCCAAGTGGGATGGTTGTGGCATTAGTTTAAGCTGAATAAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp ATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTGTCCTGTTGGCACAATaGGAGAGCCGAGTGAACATT +
Preference number: 5 (lower is better)
Translates to: ISLSYRICCNTIFFQPVSVLLAQ*ESRVNI
Trigger: AATGTTCACTCGGCTCTCCAATTGTGCCAACAGGAC...ACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TGCATACTCAAAGGCTTTGGTTGGAAGTCACTAGGTACCACTAGGTACAATGCTGTCAATTGTAGGCTTTaGCCACAAACAAATGCACAT +
Preference number: 5 (lower is better)
Translates to: CILKGFGWKSLGTTRYNAVNCRL*PQTNAH
Trigger: ATGTGCATTTGTTTGTGGCAAAAGCCTACAATTGAC...AGCATTGTACCTAGTGGTACCTAGTGACTTCCAACCAAAGCCTTTGAGTATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp GACCAATCAGTCCCTGAACCCTACCTGACATGTCAAATCCAACATTTCACATGCAACAAAATGCTAGAATaGTCCACTAGTGTTAAGACG +
Preference number: 5 (lower is better)
Translates to: DQSVPEPYLTCQIQHFTCNKMLE*STSVKT
Trigger: CGTCTTAACACTAGTGGACAATTCTAGCATTTTGTT...GCATGTGAAATGTTGGATTTGACATGTCAGGTAGGGTTCAGGGACTGATTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS CCA 90 bp TGGAGCTCTCTTAATAATCTTAGAAACCTCTTCGATGGACTCTACTaGAATTTCTTTAGAAACAACTTTGGGACCTGTGGGACAGAAGAG +
Preference number: 5 (lower is better)
Translates to: WSSLNNLRNLFDGLY*NFFRNNFGTCGTEE
Trigger: CTCTTCTGTCCCACAGGTCCCAAAGTTGTTTCTAAAGAAATTCCAGTAGAGTCCATCGAAGAGGTTTCTAAGATTATTAAGAGAGCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429860.1
CDS-3UTR CAA 90 bp CAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGTCTCATGTTTGTAGTCATCTTTaGGGGCATACAAGTATGTAT +
Preference number: 5 (lower is better)
Translates to: QDTASSRKLVESHFIVSHVCSHL*GHTSMY
Trigger: ATACATACTTGTATGCCCCAAAAGATGACTACAAAC...ATGAGACACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp TGCATACTCAAAGGCTTTGGTTGGAAGTCACTAGGTACCACTAGGTACAATGCTGTTTGTAGTCATCTTTaGGGGCATACAAGTATGTAT +
Preference number: 5 (lower is better)
Translates to: CILKGFGWKSLGTTRYNAVCSHL*GHTSMY
Trigger: ATACATACTTGTATGCCCCAAAAGATGACTACAAAC...AGCATTGTACCTAGTGGTACCTAGTGACTTCCAACCAAAGCCTTTGAGTATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TGTTATCAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGGAACTGAATACCTCTTaGTCTGCTGCACACATATTA +
Preference number: 5 (lower is better)
Translates to: CYQDTASSRKLVESHFIVELNTS*SAAHIL
Trigger: TAATATGTGTGCAGCAGACAAAGAGGTATTCAGTTC...CACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTGATAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp CAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCGAGACTGAGACACATTaGGATAACAGAAAGTGCCAC +
Preference number: 5 (lower is better)
Translates to: QSVMGEFYIVFFVSNPIGETETH*DNRKCH
Trigger: GTGGCACTTTCTGTTATCCAAATGTGTCTCAGTCTC...GCCAATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTCTTTAGAAACAACTTaGGGACCTGTCCAAAGCACT +
Preference number: 5 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQSLETT*GPVQST
Trigger: AGTGCTTTGGACAGGTCCCAAAGTTGTTTCTAAAGA...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTCACTCCATTCATGTTaGATTTGTACCAGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQSLHSC*ICTRWQ
Trigger: TTGCCACCTGGTACAAATCAAACATGAATGGAGTGA...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TTATTTATTCAGCTTAAACTAATGCCACAACCATCCCACTTGGAATCACTCCACCTGTTGTTACTACGGTaGTGGCATTTAAAGAGGGTG +
Preference number: 5 (lower is better)
Translates to: LFIQLKLMPQPSHLESLHLLLLR*WHLKRV
Trigger: CACCCTCTTTAAATGCCACAACCGTAGTAACAACAG...GTGGAGTGATTCCAAGTGGGATGGTTGTGGCATTAGTTTAAGCTGAATAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TTATTTATTCAGCTTAAACTAATGCCACAACCATCCCACTTGGAATCACTCCACGCTCCTGATAAACTGTaGTTACTACGGTTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: LFIQLKLMPQPSHLESLHAPDKL*LLRLWH
Trigger: ATGCCACAACCGTAGTAACAACAGTTTATCAGGAGC...GTGGAGTGATTCCAAGTGGGATGGTTGTGGCATTAGTTTAAGCTGAATAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp CAACCACACTGGATGCAGAAAATAGTGCTGACTACATTTATTGAAGACTCTCTCTTCTTTTCTTCTTCCTaGGTCAGAGTAGTAGGCTCA +
Preference number: 5 (lower is better)
Translates to: QPHWMQKIVLTTFIEDSLFFSSS*VRVVGS
Trigger: TGAGCCTACTACTCTGACCAAGGAAGAAGAAAAGAA...GAGAGAGTCTTCAATAAATGTAGTCAGCACTATTTTCTGCATCCAGTGTGGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp AACCTTCTCTCCTTTCTTCTCACCTATTTAGTGCATACTCAAAGGCTTTGGTTGACTAATACAATCTTCTaGCATGGACATCTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: NLLSFLLTYLVHTQRLWLTNTIF*HGHLWG
Trigger: TCCCCAGAGATGTCCATGCAAGAAGATTGTATTAGT...CAACCAAAGCCTTTGAGTATGCACTAAATAGGTGAGAAGAAAGGAGAGAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp ATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTTGTCTGTTCATCAGTTaGCATGGGGGCAATGTCACT +
Preference number: 5 (lower is better)
Translates to: ISLSYRICCNTIFFQPVSCLFIS*HGGNVT
Trigger: AGTGACATTGCCCCCATGCAAACTGATGAACAGACA...ACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGGGCACAAACTGCTCCTaGTTTGTCTGTTCATCAGTT +
Preference number: 5 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVGTNCS*FVCSSV
Trigger: AACTGATGAACAGACAAACAAGGAGCAGTTTGTGCC...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp GGAGTCACATTTCATAGTGTCTCATCTCCAAATCAGATAAAAGTGGTATACAGGGGCACAAACTGCTCCTaGTTTGTCTGTTCATCAGTT +
Preference number: 5 (lower is better)
Translates to: GVTFHSVSSPNQIKVVYRGTNCS*FVCSSV
Trigger: AACTGATGAACAGACAAACAAGGAGCAGTTTGTGCC...CCTGTATACCACTTTTATCTGATTTGGAGATGAGACACTATGAAATGTGACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp CTTTTTATTCTAAGCTCACGGTGTTTCAGATATCTATTTCACAACCAAGACCATGTCCTGTTGGCACAATaGGAGAGCCGAGTGAACATT +
Preference number: 5 (lower is better)
Translates to: LFILSSRCFRYLFHNQDHVLLAQ*ESRVNI
Trigger: AATGTTCACTCGGCTCTCCAATTGTGCCAACAGGAC...ATGGTCTTGGTTGTGAAATAGATATCTGAAACACCGTGAGCTTAGAATAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp GACAATTGGCCACGGCTTTACAAAAAGCAGAATAACTGCCCCAAATTGAAATTAATTTCTCTGCAAATCTaGTACACGGATGCCTCATCC +
Preference number: 5 (lower is better)
Translates to: DNWPRLYKKQNNCPKLKLISLQI*YTDASS
Trigger: GGATGAGGCATCCGTGTACAAGATTTGCAGAGAAAT...TAATTTCAATTTGGGGCAGTTATTCTGCTTTTTGTAAAGCCGTGGCCAATTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp ATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGCCCTCCTACTAACTaGTCTCCAATAAGATCAGGC +
Preference number: 5 (lower is better)
Translates to: ISLSYRICCNTIFFQPVSSPPTN*SPIRSG
Trigger: GCCTGATCTTATTGGAGACAAGTTAGTAGGAGGGCT...ACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp CAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTGGCTTGTCACCATTTGGCTaGGTATACTTCTCCTGCATG +
Preference number: 5 (lower is better)
Translates to: QSVMGEFYIVFFVSNPIGLSPFG*VYFSCM
Trigger: CATGCAGGAGAAGTATACCAAGCCAAATGGTGACAA...GCCAATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp GACAATTGGCCACGGCTTTACAAAAAGCAGAATAACTGCCCCAAATTGAAATTATTGTCACCATTTGGCTaGGTATACTTCTCCTGCATG +
Preference number: 5 (lower is better)
Translates to: DNWPRLYKKQNNCPKLKLLSPFG*VYFSCM
Trigger: CATGCAGGAGAAGTATACCAAGCCAAATGGTGACAA...TAATTTCAATTTGGGGCAGTTATTCTGCTTTTTGTAAAGCCGTGGCCAATTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACTTGTCACCATTTGGCTaGGTATACTTCTCCTGCATG +
Preference number: 5 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNLSPFG*VYFSCM
Trigger: CATGCAGGAGAAGTATACCAAGCCAAATGGTGACAA...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGGTTCCTTGTCACCATTaGGCTTGGTATACTTCTCCT +
Preference number: 5 (lower is better)
Translates to: HLSFIQDLLQYYILPTSEVPCHH*AWYTSP
Trigger: AGGAGAAGTATACCAAGCCAAATGGTGACAAGGAAC...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TTATTTATTCAGCTTAAACTAATGCCACAACCATCCCACTTGGAATCACTCCACGTTCCTTGTCACCATTaGGCTTGGTATACTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LFIQLKLMPQPSHLESLHVPCHH*AWYTSP
Trigger: AGGAGAAGTATACCAAGCCAAATGGTGACAAGGAAC...GTGGAGTGATTCCAAGTGGGATGGTTGTGGCATTAGTTTAAGCTGAATAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp CAACCACACTGGATGCAGAAAATAGTGCTGACTACATTTATTGAAGACTCTCTCGCAGTTAAGAGACTTTaGGACAGTTCACAGTGTCAA +
Preference number: 5 (lower is better)
Translates to: QPHWMQKIVLTTFIEDSLAVKRL*DSSQCQ
Trigger: TTGACACTGTGAACTGTCCAAAAGTCTCTTAACTGC...GAGAGAGTCTTCAATAAATGTAGTCAGCACTATTTTCTGCATCCAGTGTGGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp ATAAGCCCATGTAAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCCAAACAAATGCACATTaGTCCCTACAAAGTACAACA +
Preference number: 5 (lower is better)
Translates to: ISPCKRSQHLTQDSKRKPQTNAH*SLQSTT
Trigger: TGTTGTACTTTGTAGGGACAAATGTGCATTTGTTTG...GGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTTACATGGGCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TGCATACTCAAAGGCTTTGGTTGGAAGTCACTAGGTACCACTAGGTACAATGCTCTCAAAAATGCAAACTaGGTTCCAGCTTTACAACAT +
Preference number: 5 (lower is better)
Translates to: CILKGFGWKSLGTTRYNALKNAN*VPALQH
Trigger: ATGTTGTAAAGCTGGAACCAAGTTTGCATTTTTGAG...AGCATTGTACCTAGTGGTACCTAGTGACTTCCAACCAAAGCCTTTGAGTATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp ATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTTCCACTGTGTGCAACTaGCCTACTCATCACTACATC +
Preference number: 5 (lower is better)
Translates to: ISLSYRICCNTIFFQPVSSTVCN*PTHHYI
Trigger: GATGTAGTGATGAGTAGGCAAGTTGCACACAGTGGA...ACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357797.9
ENST00000439817.5
CDS-3UTR CAA 90 bp CCAAATCAGATAAAAGTGGTATACAGGGTTCCATCCAGAAAGCATTCAGTCAGAAACCTAGGCAACGAATaGAAGAGACTTGGAAATGTG +
Preference number: 5 (lower is better)
Translates to: PNQIKVVYRVPSRKHSVRNLGNE*KRLGNV
Trigger: CACATTTCCAAGTCTCTTCAATTCGTTGCCTAGGTT...TCTGACTGAATGCTTTCTGGATGGAACCCTGTATACCACTTTTATCTGATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS CCA 90 bp TGGAGCTCTCTTAATAATCTTAGAAACCTCTTCGATGGACTCTACTaGAATTTCTTTAGAAACAACTTTGGGACCTGTCCAAAGCACTTC +
Preference number: 5 (lower is better)
Translates to: WSSLNNLRNLFDGLY*NFFRNNFGTCPKHF
Trigger: GAAGTGCTTTGGACAGGTCCCAAAGTTGTTTCTAAAGAAATTCCAGTAGAGTCCATCGAAGAGGTTTCTAAGATTATTAAGAGAGCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS-3UTR CAA 90 bp TCAACTACCATTCACAAGGTGCAGTTAAGAGACTTTTGGACAGTTCACAGTGTCAATGTGGATACTTCCTaGGGGTTAGAAAAAGTGATA +
Preference number: 5 (lower is better)
Translates to: STTIHKVQLRDFWTVHSVNVDTS*GLEKVI
Trigger: TATCACTTTTTCTAACCCCAAGGAAGTATCCACATT...GACACTGTGAACTGTCCAAAAGTCTCTTAACTGCACCTTGTGAATGGTAGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TGTTATCAAGACACAGCAAGCAGCAGAAAGCTTGTGGAGTCACATTTCATAGTGAATGTGGATACTTCCTaGGGGTTAGAAAAAGTGATA +
Preference number: 5 (lower is better)
Translates to: CYQDTASSRKLVESHFIVNVDTS*GLEKVI
Trigger: TATCACTTTTTCTAACCCCAAGGAAGTATCCACATT...CACTATGAAATGTGACTCCACAAGCTTTCTGCTGCTTGCTGTGTCTTGATAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp TGCACATTTGTCCCTACAAAGTACAACATGCCTGAACCAACAGTCATTACAGGAAATGTGGATACTTCCTaGGGGTTAGAAAAAGTGATA +
Preference number: 5 (lower is better)
Translates to: CTFVPTKYNMPEPTVITGNVDTS*GLEKVI
Trigger: TATCACTTTTTCTAACCCCAAGGAAGTATCCACATT...TCCTGTAATGACTGTTGGTTCAGGCATGTTGTACTTTGTAGGGACAAATGTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TTATTTATTCAGCTTAAACTAATGCCACAACCATCCCACTTGGAATCACTCCACTCTTTAGAAACAACTTaGGGACCTGTCCAAAGCACT +
Preference number: 5 (lower is better)
Translates to: LFIQLKLMPQPSHLESLHSLETT*GPVQST
Trigger: AGTGCTTTGGACAGGTCCCAAAGTTGTTTCTAAAGA...GTGGAGTGATTCCAAGTGGGATGGTTGTGGCATTAGTTTAAGCTGAATAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp CTTTTTATTCTAAGCTCACGGTGTTTCAGATATCTATTTCACAACCAAGACCATTCCACTGTGTGCAACTaGCCTACTGCTGTATTGATG +
Preference number: 5 (lower is better)
Translates to: LFILSSRCFRYLFHNQDHSTVCN*PTAVLM
Trigger: CATCAATACAGCAGTAGGCAAGTTGCACACAGTGGA...ATGGTCTTGGTTGTGAAATAGATATCTGAAACACCGTGAGCTTAGAATAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp ATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTCTGTTGTTACTACGGTaGTGGCATTTAAAGAGGGTG +
Preference number: 5 (lower is better)
Translates to: ISLSYRICCNTIFFQPVSLLLLR*WHLKRV
Trigger: CACCCTCTTTAAATGCCACAACCGTAGTAACAACAG...ACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp GGAGTCACATTTCATAGTGTCTCATCTCCAAATCAGATAAAAGTGGTATACAGGTTCTTTTCTTCTTCCTaGGTCAGAGTAGTAGGCTCA +
Preference number: 5 (lower is better)
Translates to: GVTFHSVSSPNQIKVVYRFFSSS*VRVVGS
Trigger: TGAGCCTACTACTCTGACCAAGGAAGAAGAAAAGAA...CCTGTATACCACTTTTATCTGATTTGGAGATGAGACACTATGAAATGTGACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGACTAATACAATCTTCTaGCATGGACATCTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: HLSFIQDLLQYYILPTSETNTIF*HGHLWG
Trigger: TCCCCAGAGATGTCCATGCAAGAAGATTGTATTAGT...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TCTCAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTAGCCCTCCTACTAACTaGTCTCCAATAAGATCAGGC +
Preference number: 5 (lower is better)
Translates to: SQSVMGEFYIVFFVSNPISPPTN*SPIRSG
Trigger: GCCTGATCTTATTGGAGACAAGTTAGTAGGAGGGCT...AATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTTTGTTTCGAATCCAATaGGCTGATTTGTTACCATTC +
Preference number: 5 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFLFRIQ*ADLLPF
Trigger: GAATGGTAACAAATCAGCCAATTGGATTCGAAACAA...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp AAAAGGTCTCAGCACCTAACACAAGACTCAAAAAGGAAGCCCACATCTCTCTTTAACAAAATGCTAGAATaGTCCACTAGTGTTAAGACG +
Preference number: 5 (lower is better)
Translates to: KRSQHLTQDSKRKPTSLFNKMLE*STSVKT
Trigger: CGTCTTAACACTAGTGGACAATTCTAGCATTTTGTT...AAAGAGAGATGTGGGCTTCCTTTTTGAGTCTTGTGTTAGGTGCTGAGACCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TCTCAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTTCCACTGTGTGCAACTaGCCTACTCATCACTACATC +
Preference number: 5 (lower is better)
Translates to: SQSVMGEFYIVFFVSNPISTVCN*PTHHYI
Trigger: GATGTAGTGATGAGTAGGCAAGTTGCACACAGTGGA...AATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357797.9
ENST00000439817.5
CDS TCA 90 bp TTCAATTCCTCTGCCATTTTCGCTTCAACAATTTCACTCAGTATTTaGTTGTCATTCTTGTGGTCCGTTTCTTCTTGTTTTTCCACCACC +
Preference number: 5 (lower is better)
Translates to: FNSSAIFASTISLSI*LSFLWSVSSCFSTT
Trigger: GGTGGTGGAAAAACAAGAAGAAACGGACCACAAGAATGACAATCAAATACTGAGTGAAATTGTTGAAGCGAAAATGGCAGAGGAATTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
ENST00000482611.5
CDS TCA 90 bp GCCACAGTAAACTTTTCAGTTGCTAATATAAAATTCAGACTTCAGTaGTCCAAGACCCACTGTACTTGCATGAACTTACGGAACCTACAT +
Preference number: 5 (lower is better)
Translates to: ATVNFSVANIKFRLQ*SKTHCTCMNLRNLH
Trigger: ATGTAGGTTCCGTAAGTTCATGCAAGTACAGTGGGTCTTGGATCACTGAAGTCTGAATTTTATATTAGCAACTGAAAAGTTTACTGTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461645.1
CDS GCA 90 bp GATGGAGACTTGGGCATGAGCAAAAGAACTGAATACCTCTTTGTCTaGTGCACACATATTATGGTCTATATCATCAAAAAGCAAAGCAAA +
Preference number: 5 (lower is better)
Translates to: DGDLGMSKRTEYLFV*CTHIMVYIIKKQSK
Trigger: TTTGCTTTGCTTTTTGATGATATAGACCATAATATGTGTGCAGCAGACAAAGAGGTATTCAGTTCTTTTGCTCATGCCCAAGTCTCCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000429860.1
ENST00000439817.5
CDS-3UTR CAA 90 bp CATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGGAACTGAATACCTCTTaGTCTGCTGCACACATATTA +
Preference number: 5 (lower is better)
Translates to: HLSFIQDLLQYYILPTSEELNTS*SAAHIL
Trigger: TAATATGTGTGCAGCAGACAAAGAGGTATTCAGTTC...CTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TTATTTATTCAGCTTAAACTAATGCCACAACCATCCCACTTGGAATCACTCCACGAACTGAATACCTCTTaGTCTGCTGCACACATATTA +
Preference number: 5 (lower is better)
Translates to: LFIQLKLMPQPSHLESLHELNTS*SAAHIL
Trigger: TAATATGTGTGCAGCAGACAAAGAGGTATTCAGTTC...GTGGAGTGATTCCAAGTGGGATGGTTGTGGCATTAGTTTAAGCTGAATAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TCTCAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTACAAAGGCTTTTCATTaGGACCTGGCACAAACTGCT +
Preference number: 5 (lower is better)
Translates to: SQSVMGEFYIVFFVSNPITKAFH*DLAQTA
Trigger: AGCAGTTTGTGCCAGGTCCAAATGAAAAGCCTTTGT...AATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TCTCAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTATTTCTCTGCAAATCTaGTACACGGATGCCTCATCC +
Preference number: 5 (lower is better)
Translates to: SQSVMGEFYIVFFVSNPIISLQI*YTDASS
Trigger: GGATGAGGCATCCGTGTACAAGATTTGCAGAGAAAT...AATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp CCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACCAGCTCAAAAATGCAAACTaGGTTCCAGCTTTACAACAT +
Preference number: 5 (lower is better)
Translates to: PTSLFHTGFAAILYSSNQLKNAN*VPALQH
Trigger: ATGTTGTAAAGCTGGAACCAAGTTTGCATTTTTGAG...CTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000439817.5
CDS TCA 90 bp TGCTGCACACATATTATGGTCTATATCATCAAAAAGCAAAGCAAATaGTCTGCACCCAAACTGAGAAACCTGGTCCAATTTACGTTTCAA +
Preference number: 5 (lower is better)
Translates to: CCTHIMVYIIKKQSK*SAPKLRNLVQFTFQ
Trigger: TTGAAACGTAAATTGGACCAGGTTTCTCAGTTTGGGTGCAGATCATTTGCTTTGCTTTTTGATGATATAGACCATAATATGTGTGCAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000429860.1
ENST00000439817.5
CDS-3UTR CAA 90 bp AAGCCCACATCTCTCTTTCATACAGGATTTGCTGCAATACTATATTCTTCCAACGTTTGTAGTCATCTTTaGGGGCATACAAGTATGTAT +
Preference number: 5 (lower is better)
Translates to: KPTSLFHTGFAAILYSSNVCSHL*GHTSMY
Trigger: ATACATACTTGTATGCCCCAAAAGATGACTACAAAC...GTTGGAAGAATATAGTATTGCAGCAAATCCTGTATGAAAGAGAGATGTGGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp CTTTTTATTCTAAGCTCACGGTGTTTCAGATATCTATTTCACAACCAAGACCATTCACTCCATTCATGTTaGATTTGTACCAGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: LFILSSRCFRYLFHNQDHSLHSC*ICTRWQ
Trigger: TTGCCACCTGGTACAAATCAAACATGAATGGAGTGA...ATGGTCTTGGTTGTGAAATAGATATCTGAAACACCGTGAGCTTAGAATAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS-3UTR CAA 90 bp TCTCAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTTCACTCCATTCATGTTaGATTTGTACCAGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: SQSVMGEFYIVFFVSNPISLHSC*ICTRWQ
Trigger: TTGCCACCTGGTACAAATCAAACATGAATGGAGTGA...AATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TCTCAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTTTCTTTTCTTCTTCCTaGGTCAGAGTAGTAGGCTCA +
Preference number: 5 (lower is better)
Translates to: SQSVMGEFYIVFFVSNPIFFSSS*VRVVGS
Trigger: TGAGCCTACTACTCTGACCAAGGAAGAAGAAAAGAA...AATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TCTCAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTACATCTCTGGGGATTTaGATTCAGCTATGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: SQSVMGEFYIVFFVSNPITSLGI*IQLCSL
Trigger: AAGAGAGCATAGCTGAATCAAAATCCCCAGAGATGT...AATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TACAGGATTTGCTGCAATACTATATTCTTCCAACCAGTGAGTAGTCTCAAAGTGTTGTTTCGAATCCAATaGGCTGATTTGTTACCATTC +
Preference number: 5 (lower is better)
Translates to: YRICCNTIFFQPVSSLKVLFRIQ*ADLLPF
Trigger: GAATGGTAACAAATCAGCCAATTGGATTCGAAACAA...CACTTTGAGACTACTCACTGGTTGGAAGAATATAGTATTGCAGCAAATCCTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS-3UTR CAA 90 bp TCTCAAAGTGTGATGGGTGAGTTTTACATAGTCTTCTTTGTTTCGAATCCAATTTTGTTTCGAATCCAATaGGCTGATTTGTTACCATTC +
Preference number: 5 (lower is better)
Translates to: SQSVMGEFYIVFFVSNPILFRIQ*ADLLPF
Trigger: GAATGGTAACAAATCAGCCAATTGGATTCGAAACAA...AATTGGATTCGAAACAAAGAAGACTATGTAAAACTCACCCATCACACTTTGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS GCA 72 bp TTCTCCGGGTGCCGGAGCTGCCGGCGGCTCCAGCGATaGCCCCGCAGAGGCGGCAGGGTTGGAGCTGAGCTC +
Preference number: 6 (lower is better)
Translates to: FSGCRSCRRLQR*PRRGGRVGAEL
Trigger: GAGCTCAGCTCCAACCCTGCCGCCTCTGCGGGGGCATCGCTGGAGCCGCCGGCAGCTCCGGCACCCGGAGAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS TCA 72 bp TCCCCCTCCCTCTCCGCAGGGACCCGAATGCCCGGATaGGAAGGGCGGCGGCACCGGCGCGAGCCCTTTGTC +
Preference number: 6 (lower is better)
Translates to: SPSLSAGTRMPG*EGRRHRREPFV
Trigger: GACAAAGGGCTCGCGCCGGTGCCGCCGCCCTTCTCATCCGGGCATTCGGGTCCCTGCGGAGAGGGAGGGGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS CAA 72 bp CCGGATGAGAAGGGCGGCGGCACCGGCGCGAGCCCTTaGTCAGCCGCAGCCTCGGCTTTAAGCTGGGGCGCC +
Preference number: 6 (lower is better)
Translates to: PDEKGGGTGASP*SAAASALSWGA
Trigger: GGCGCCCCAGCTTAAAGCCGAGGCTGCGGCTGACAAAGGGCTCGCGCCGGTGCCGCCGCCCTTCTCATCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS CAA 72 bp GGCGGCTCCAGCGATGCCCCCGCAGAGGCGGCAGGGTaGGAGCTGAGCTCGCTCTCCCGCTCCTCCAACGTC +
Preference number: 6 (lower is better)
Translates to: GGSSDAPAEAAG*ELSSLSRSSNV
Trigger: GACGTTGGAGGAGCGGGAGAGCGAGCTCAGCTCCAACCCTGCCGCCTCTGCGGGGGCATCGCTGGAGCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS CAA 90 bp CCCGAATGCCCGGATGAGAAGGGCGGCGGCACCGGCGCGAGCCCTTaGTCAGCCGCAGCCTCGGCTTTAAGCTGGGGCGCCAGAAGCCTA +
Preference number: 6 (lower is better)
Translates to: PECPDEKGGGTGASP*SAAASALSWGARSL
Trigger: TAGGCTTCTGGCGCCCCAGCTTAAAGCCGAGGCTGCGGCTGACAAAGGGCTCGCGCCGGTGCCGCCGCCCTTCTCATCCGGGCATTCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS TCA 72 bp CCAGCGATGCCCCCGCAGAGGCGGCAGGGTTGGAGCTaGGCTCGCTCTCCCGCTCCTCCAACGTCGCTTGAC +
Preference number: 6 (lower is better)
Translates to: PAMPPQRRQGWS*ARSPAPPTSLD
Trigger: GTCAAGCGACGTTGGAGGAGCGGGAGAGCGAGCTCAGCTCCAACCCTGCCGCCTCTGCGGGGGCATCGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS CAA 90 bp GGCAGGGTTGGAGCTGAGCTCGCTCTCCCGCTCCTCCAACGTCGCTaGACTCTCCTTCTGCACCATCCTCCTGCCCCCGGCCGCTGCCAC +
Preference number: 6 (lower is better)
Translates to: GRVGAELALPLLQRR*TLLLHHPPAPGRCH
Trigger: GTGGCAGCGGCCGGGGGCAGGAGGATGGTGCAGAAGGAGAGTCAAGCGACGTTGGAGGAGCGGGAGAGCGAGCTCAGCTCCAACCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS CCA 72 bp GCGAGCCCTTTGTCAGCCGCAGCCTCGGCTTTAAGCTaGGGCGCCAGAAGCCTAAGCGGAGAGCGAGGCTGT +
Preference number: 6 (lower is better)
Translates to: ASPLSAAASALS*GARSLSGERGC
Trigger: ACAGCCTCGCTCTCCGCTTAGGCTTCTGGCGCCCCAGCTTAAAGCCGAGGCTGCGGCTGACAAAGGGCTCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS TCA 72 bp CTGGGGCGCCAGAAGCCTAAGCGGAGAGCGAGGCTGTaGCCTCTCGTTCCCTGGAAGAAGACGGCCAAGGGT +
Preference number: 6 (lower is better)
Translates to: LGRQKPKRRARL*PLVPWKKTAKG
Trigger: ACCCTTGGCCGTCTTCTTCCAGGGAACGAGAGGTCACAGCCTCGCTCTCCGCTTAGGCTTCTGGCGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS GCA 72 bp GGCCAGGCTGGAGAGGGGCAGGCATTCTCCCTCGCGTaGACGCGCTCTCTCTCTCTCTCTCTCTCTTTCCCT +
Preference number: 6 (lower is better)
Translates to: GQAGEGQAFSLA*TRSLSLSLSFP
Trigger: AGGGAAAGAGAGAGAGAGAGAGAGAGAGCGCGTGCACGCGAGGGAGAATGCCTGCCCCTCTCCAGCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462994.1
CDS GCA 72 bp AAGACGGCCAAGGGTCCTGTCCTCGTTCTCTGCCTCTaGTGCCCTCCCGATAATCTTAGGTCTTCCGCTGTT +
Preference number: 6 (lower is better)
Translates to: KTAKGPVLVLCL*CPPDNLRSSAV
Trigger: AACAGCGGAAGACCTAAGATTATCGGGAGGGCAGCAGAGGCAGAGAACGAGGACAGGACCCTTGGCCGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS GCA 72 bp TGGAAGAAGACGGCCAAGGGTCCTGTCCTCGTTCTCTaGCTCTGCTGCCCTCCCGATAATCTTAGGTCTTCC +
Preference number: 6 (lower is better)
Translates to: WKKTAKGPVLVL*LCCPPDNLRSS
Trigger: GGAAGACCTAAGATTATCGGGAGGGCAGCAGAGGCAGAGAACGAGGACAGGACCCTTGGCCGTCTTCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS TCA 72 bp TTCACAGAAAGCTCCCCGGGAGCCATTAGCCTTCAGTaGAGACAGGAGGCAAGCCATCATGCTTTTGGCCAC +
Preference number: 6 (lower is better)
Translates to: FTESSPGAISLQ*RQEASHHAFGH
Trigger: GTGGCCAAAAGCATGATGGCTTGCCTCCTGTCTTCACTGAAGGCTAATGGCTCCCGGGGAGCTTTCTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
ENST00000461645.1
ENST00000462994.1
ENST00000479811.5
ENST00000482611.5
ENST00000494347.5
CDS GCA 72 bp TTCCTTGGTCAGAGTAGTAGGCTCACCACTCAAGGCTaGTCCCTGGCTCATAATGGGCTCCTGATAAACTGT +
Preference number: 6 (lower is better)
Translates to: FLGQSSRLTTQG*SLAHNGLLINC
Trigger: ACAGTTTATCAGGAGCCCATTATGAGCCAGGGAGCAGCCTTGAGTGGTGAGCCTACTACTCTGACCAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS CCA 72 bp TCCCTATTTATATCGTCAGGGCTGGTCTCGAATTCCTaGGCTCGAGTGATCCTTCTATCTCGGCCTCCTGAA +
Preference number: 6 (lower is better)
Translates to: SLFISSGLVSNS*ARVILLSRPPE
Trigger: TTCAGGAGGCCGAGATAGAAGGATCACTCGAGCCCAGGAATTCGAGACCAGCCCTGACGATATAAATAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462994.1
CDS TCA 72 bp CATCTTCATCTTCTAGGACAAAGCAGTAATCCAGGCTaGGGGAAAGCAGCCCTCCTACTAACCTGCTCAGAA +
Preference number: 6 (lower is better)
Translates to: HLHLLGQSSNPG*GKAALLLTCSE
Trigger: TTCTGAGCAGGTTAGTAGGAGGGCTGCTTTCCCTCAGCCTGGATTACTGCTTTGTCCTAGAAGATGAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461645.1
CDS GCA 72 bp AGTCCCATCAACTACACTTGCTTTAGCTCCACTGTGTaGAACTTGCCTACTGCTGTATTGATGAGGCACACC +
Preference number: 6 (lower is better)
Translates to: SPINYTCFSSTV*NLPTAVLMRHT
Trigger: GGTGTGCCTCATCAATACAGCAGTAGGCAAGTTGCACACAGTGGAGCTAAAGCAAGTGTAGTTGATGGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361464.8
ENST00000370094.7
CDS CAA 72 bp TTCTCAGCCTCAGAGAGTTCCTTGTCACCATTTGGCTaGGTATACTTCTCCTGCATGAAGGGGATCCAGGAA +
Preference number: 6 (lower is better)
Translates to: FSASESSLSPFG*VYFSCMKGIQE
Trigger: TTCCTGGATCCCCTTCATGCAGGAGAAGTATACCAAGCCAAATGGTGACAAGGAACTCTCTGAGGCTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
ENST00000461645.1
ENST00000479811.5
ENST00000482611.5
CDS TCA 72 bp CATCTTCATCTTCTAGGACAAAGCAGTAATCCAGGCTaGGGGAAAGCAGCCCTCCTACTAACTTGTCTCCAA +
Preference number: 6 (lower is better)
Translates to: HLHLLGQSSNPG*GKAALLLTCLQ
Trigger: TTGGAGACAAGTTAGTAGGAGGGCTGCTTTCCCTCAGCCTGGATTACTGCTTTGTCCTAGAAGATGAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
ENST00000479811.5
ENST00000482611.5
CDS CAA 90 bp GGTCTCCAATTAAGAATTGTGCTGAAGAATGACTACGACACCCTGTaGAGATCAGATCCAAGCGGAGAACGTTACGAGAAAGGGGATTTC +
Preference number: 6 (lower is better)
Translates to: GLQLRIVLKNDYDTL*RSDPSGERYEKGDF
Trigger: GAAATCCCCTTTCTCGTAACGTTCTCCGCTTGGATCTGATCTCAACAGGGTGTCGTAGTCATTCTTCAGCACAATTCTTAATTGGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492204.1
CDS TCA 72 bp GGTTCTTGGTCTCCAATTAAGAATTGTGCTGAAGAATaGCTACGACACCCTGTTGAGATCAGATCCAAGCGG +
Preference number: 6 (lower is better)
Translates to: GSWSPIKNCAEE*LRHPVEIRSKR
Trigger: CCGCTTGGATCTGATCTCAACAGGGTGTCGTAGTCATTCTTCAGCACAATTCTTAATTGGAGACCAAGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492204.1
CDS CCA 72 bp GAAGCCATTGAAATTCCCGTAACATCTGTGCTCCTTTaGGTCCATGCTCGTAAGGAAGGTAGAATAGATCAG +
Preference number: 6 (lower is better)
Translates to: EAIEIPVTSVLL*VHARKEGRIDQ
Trigger: CTGATCTATTCTACCTTCCTTACGAGCATGGACCCAAAGGAGCACAGATGTTACGGGAATTTCAATGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
ENST00000482611.5
CDS CAA 90 bp TATGAAGACCTCAACTACCATTCACAAGGTGCAGTTAAGAGACTTTaGGACAGTTCACAGTGTCAACAAATGTCACAGGCTCCGACCAAG +
Preference number: 6 (lower is better)
Translates to: YEDLNYHSQGAVKRL*DSSQCQQMSQAPTK
Trigger: CTTGGTCGGAGCCTGTGACATTTGTTGACACTGTGAACTGTCCAAAAGTCTCTTAACTGCACCTTGTGAATGGTAGTTGAGGTCTTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
ENST00000462994.1
ENST00000482611.5
ENST00000494347.5
CDS TCA 72 bp TTGACACTGACAACACTACTATTTGCTCGAAGCCATTaGAATTCCCGTAACATCTGTGCTCCTTTGGGTCCA +
Preference number: 6 (lower is better)
Translates to: LTLTTLLFARSH*NSRNICAPLGP
Trigger: TGGACCCAAAGGAGCACAGATGTTACGGGAATTTCAATGGCTTCGAGCAAATAGTAGTGTTGTCAGTGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
ENST00000482611.5
CDS TCA 72 bp AAAGAATTGTCCTGTTGGCACAATTGGAGAGCCGAGTaGACATTCCCATCACTAGTCCACACATCTCTTCAA +
Preference number: 6 (lower is better)
Translates to: KELSCWHNWRAE*TFPSLVHTSLQ
Trigger: TTGAAGAGATGTGTGGACTAGTGATGGGAATGTTCACTCGGCTCTCCAATTGTGCCAACAGGACAATTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
ENST00000482611.5
CDS CAA 90 bp GAAGCTTTTCACCCACAGTCCTTAAATATGGAGACTGAGACACATTaGGATAACAGAAAGTGCCACAGTATTCTGTGGGACAGAAGAGGA +
Preference number: 6 (lower is better)
Translates to: EAFHPQSLNMETETH*DNRKCHSILWDRRG
Trigger: TCCTCTTCTGTCCCACAGAATACTGTGGCACTTTCTGTTATCCAAATGTGTCTCAGTCTCCATATTTAAGGACTGTGGGTGAAAAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS CAA 72 bp CTCAACTACCATTCACAAGGTGCAGTTAAGAGACTTTaGGACAGTTCACAGTGTCAACAAATGTCACAGGCT +
Preference number: 6 (lower is better)
Translates to: LNYHSQGAVKRL*DSSQCQQMSQA
Trigger: AGCCTGTGACATTTGTTGACACTGTGAACTGTCCAAAAGTCTCTTAACTGCACCTTGTGAATGGTAGTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
ENST00000462994.1
ENST00000482611.5
ENST00000494347.5
CDS TCA 72 bp AGAGATGAGAGTCATAAGTTGCTCAGCTTCCTCCACTaGATACATCTCTCGCCAAAACATCCTATGTTTGTA +
Preference number: 6 (lower is better)
Translates to: RDESHKLLSFLH*IHLSPKHPMFV
Trigger: TACAAACATAGGATGTTTTGGCGAGAGATGTATTCAGTGGAGGAAGCTGAGCAACTTATGACTCTCATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000429860.1
ENST00000439817.5
CDS TCA 72 bp GGTTCTTGGTCTCCAATTAAGAATTGTGCTGAAGAATaGCTACGACACCCTAACCACTGTACAAAAGACTTC +
Preference number: 6 (lower is better)
Translates to: GSWSPIKNCAEE*LRHPNHCTKDF
Trigger: GAAGTCTTTTGTACAGTGGTTAGGGTGTCGTAGTCATTCTTCAGCACAATTCTTAATTGGAGACCAAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000439817.5
CDS TCA 72 bp TCAGACTTCAGTGATCCAAGACCCACTGTACTTGCATaGACTTACGGAACCTACATTTGGTGTAAGAAACTA +
Preference number: 6 (lower is better)
Translates to: SDFSDPRPTVLA*TYGTYIWCKKL
Trigger: TAGTTTCTTACACCAAATGTAGGTTCCGTAAGTTCATGCAAGTACAGTGGGTCTTGGATCACTGAAGTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461645.1
CDS GCA 72 bp GGGACAATATATTTGAGGAGAAGAGATTATTCCTGGTaGACCTACCTAACCACTGTACAAAAGACTTCACCA +
Preference number: 6 (lower is better)
Translates to: GTIYLRRRDYSW*TYLTTVQKTSP
Trigger: TGGTGAAGTCTTTTGTACAGTGGTTAGGTAGGTGCACCAGGAATAATCTCTTCTCCTCAAATATATTGTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370094.7
CDS CAA 72 bp ACCTGGTCCAATTTACGTTTCAATGTGGATACTTCCTaGGGGTTAGAAAAAGTGATATCCAATCCAGGTGAG +
Preference number: 6 (lower is better)
Translates to: TWSNLRFNVDTS*GLEKVISNPGE
Trigger: CTCACCTGGATTGGATATCACTTTTTCTAACCCCAAGGAAGTATCCACATTGAAACGTAAATTGGACCAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000429860.1
ENST00000439817.5
CDS CAA 90 bp AATTTCACTCAGTATTTGATTGTCATTCTTGTGGTCCGTTTCTTCTaGTTTTTCCACCACCATGTCCATGGGTTCTTCATCAGGCTGTTT +
Preference number: 6 (lower is better)
Translates to: NFTQYLIVILVVRFF*FFHHHVHGFFIRLF
Trigger: AAACAGCCTGATGAAGAACCCATGGACATGGTGGTGGAAAAACAAGAAGAAACGGACCACAAGAATGACAATCAAATACTGAGTGAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
ENST00000482611.5
CDS TCA 72 bp TTCCTTGGGGTTAGAAAAAGTGATATCCAATCCAGGTaGGATCGCATAGATGAACTCTATCTCATATTCTCG +
Preference number: 6 (lower is better)
Translates to: FLGVRKSDIQSR*DRIDELYLIFS
Trigger: CGAGAATATGAGATAGAGTTCATCTATGCGATCTCACCTGGATTGGATATCACTTTTTCTAACCCCAAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000429860.1
ENST00000439817.5
CDS GCA 72 bp AATATGGAGACTGAGACACATTTGGATAACAGAAAGTaGCACAGTATTCTGTGGGACAGAAGAGGAAAGTTT +
Preference number: 6 (lower is better)
Translates to: NMETETHLDNRK*HSILWDRRGKF
Trigger: AAACTTTCCTCTTCTGTCCCACAGAATACTGTGGCACTTTCTGTTATCCAAATGTGTCTCAGTCTCCATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS GCA 72 bp GAAAGGGTAAACCCACTCCATCGTCATACATTTCTCTaGAAATCTTGTACACGGATGCCTGAAAATATAATC +
Preference number: 6 (lower is better)
Translates to: ERVNPLHRHTFL*KSCTRMPENII
Trigger: GATTATATTTTCAGGCATCCGTGTACAAGATTTGCAGAGAAATGTATGACGATGGAGTGGGTTTACCCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461645.1
CDS CAA 72 bp AAAATTCAGACTTCAGTGATCCAAGACCCACTGTACTaGCATGAACTTACGGAACCTACATTTGGTGTAAGA +
Preference number: 6 (lower is better)
Translates to: KIQTSVIQDPLY*HELTEPTFGVR
Trigger: TCTTACACCAAATGTAGGTTCCGTAAGTTCATGCAAGTACAGTGGGTCTTGGATCACTGAAGTCTGAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461645.1
CDS CAA 72 bp TTAAGTTTTAAGTGTGCACCATACCCATACACCAAGTaGGTAGGTAGAGAGACAATTACCTCATCCTTAGGA +
Preference number: 6 (lower is better)
Translates to: LSFKCAPYPYTK*VGRETITSSLG
Trigger: TCCTAAGGATGAGGTAATTGTCTCTCTACCTACCAACTTGGTGTATGGGTATGGTGCACACTTAAAACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492204.1
CDS CCA 72 bp CTTAATAATCTTAGAAACCTCTTCGATGGACTCTACTaGAATTTCTTTAGAAACAACTTTGGGACCTGTGGG +
Preference number: 6 (lower is better)
Translates to: LNNLRNLFDGLY*NFFRNNFGTCG
Trigger: CCCACAGGTCCCAAAGTTGTTTCTAAAGAAATTCCAGTAGAGTCCATCGAAGAGGTTTCTAAGATTATTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429860.1
CDS TCA 72 bp AACTTTTCAGTTGCTAATATAAAATTCAGACTTCAGTaGTCCAAGACCCACTGTACTTGCATGAACTTACGG +
Preference number: 6 (lower is better)
Translates to: NFSVANIKFRLQ*SKTHCTCMNLR
Trigger: CCGTAAGTTCATGCAAGTACAGTGGGTCTTGGATCACTGAAGTCTGAATTTTATATTAGCAACTGAAAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461645.1
CDS GCA 72 bp GGCATGAGCAAAAGAACTGAATACCTCTTTGTCTGCTaGACACATATTATGGTCTATATCATCAAAAAGCAA +
Preference number: 6 (lower is better)
Translates to: GMSKRTEYLFVC*THIMVYIIKKQ
Trigger: TTGCTTTTTGATGATATAGACCATAATATGTGTGCAGCAGACAAAGAGGTATTCAGTTCTTTTGCTCATGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000429860.1
ENST00000439817.5
CDS GCA 72 bp TTGGGCATGAGCAAAAGAACTGAATACCTCTTTGTCTaGTGCACACATATTATGGTCTATATCATCAAAAAG +
Preference number: 6 (lower is better)
Translates to: LGMSKRTEYLFV*CTHIMVYIIKK
Trigger: CTTTTTGATGATATAGACCATAATATGTGTGCAGCAGACAAAGAGGTATTCAGTTCTTTTGCTCATGCCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000429860.1
ENST00000439817.5
CDS CCA 72 bp CTTAATAATCTTAGAAACCTCTTCGATGGACTCTACTaGAATTTCTTTAGAAACAACTTTGGGACCTGTCCA +
Preference number: 6 (lower is better)
Translates to: LNNLRNLFDGLY*NFFRNNFGTCP
Trigger: TGGACAGGTCCCAAAGTTGTTTCTAAAGAAATTCCAGTAGAGTCCATCGAAGAGGTTTCTAAGATTATTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
CDS TCA 72 bp TCTGCCATTTTCGCTTCAACAATTTCACTCAGTATTTaGTTGTCATTCTTGTGGTCCGTTTCTTCTTGTTTT +
Preference number: 6 (lower is better)
Translates to: SAIFASTISLSI*LSFLWSVSSCF
Trigger: AAAACAAGAAGAAACGGACCACAAGAATGACAATCAAATACTGAGTGAAATTGTTGAAGCGAAAATGGCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000439817.5
ENST00000482611.5
CDS CAA 72 bp TCTCTCGCCAAAACATCCTATGTTTGTAGTCATCTTTaGGGGCATACAAGTATGTATTTAATTCCCATTTCT +
Preference number: 6 (lower is better)
Translates to: SLAKTSYVCSHL*GHTSMYLIPIS
Trigger: AGAAATGGGAATTAAATACATACTTGTATGCCCCAAAAGATGACTACAAACATAGGATGTTTTGGCGAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357797.9
ENST00000361464.8
ENST00000370094.7
ENST00000429860.1
ENST00000439817.5