Pregenerated sensors for OFD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000046651Ensembl transcript IDs: ENST00000464463.6, ENST00000490265.6, ENST00000682562.1, ENST00000683055.1, ENST00000683284.1, ENST00000683427.1, ENST00000683454.1, ENST00000683713.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TGCAAAGCCAGTGCACCTGCCCCTCTCTCCTGCAATGCCTCCCCGTaGTGCTACAAGAAAGAAGCTTGCCCTCGGCAACACATGCATGCG | + |
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Preference number: 5 (lower is better) Translates to: CKASAPAPLSCNASP*CYKKEACPRQHMHA Trigger: CGCATGCATGTGTTGCCGAGGGCAAGCTTCTTTCTTGTAGCATCACGGGGAGGCATTGCAGGAGAGAGGGGCAGGTGCACTGGCTTTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000464463.6 ENST00000683055.1 |
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| CDS GCA 90 bp | CAGGTTCGATGTCTGGTGAAGGCCCGGTCTCGGCTTCCAAGATGGTaGCTTGTTGCTGTGTTCTCCAGAGGGGATCAATGCAGTGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: QVRCLVKARSRLPRW*LVAVFSRGDQCSVF Trigger: GAAGACACTGCATTGATCCCCTCTGGAGAACACAGCAACAAGGCACCATCTTGGAAGCCGAGACCGGGCCTTCACCAGACATCGAACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000464463.6 ENST00000490265.6 ENST00000682562.1 ENST00000683284.1 ENST00000683427.1 ENST00000683454.1 ENST00000683713.1 |
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| CDS TCA 90 bp | TCTGGGCATCAGAAAGTTTTTAAAGCTCCTCGGGTGATTCCACCATaGGGCCAGAGCATGAAGAGAAGGCAGGCCTGTGCCCAGTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: SGHQKVFKAPRVIPP*GQSMKRRQACAQSC Trigger: GCAAGACTGGGCACAGGCCTGCCTTCTCTTCATGCTCTGGCCTCATGGTGGAATCACCCGAGGAGCTTTAAAAACTTTCTGATGCCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS GCA 90 bp | ATGTCTGGTGAAGGCCCGGTCTCGGCTTCCAAGATGGTGCCTTGTTaGTGTGTTCTCCAGAGGGGATCAATGCAGTGTCTTCAAATGGTG | + |
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Preference number: 5 (lower is better) Translates to: MSGEGPVSASKMVPC*CVLQRGSMQCLQMV Trigger: CACCATTTGAAGACACTGCATTGATCCCCTCTGGAGAACACAGCAACAAGGCACCATCTTGGAAGCCGAGACCGGGCCTTCACCAGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000464463.6 ENST00000490265.6 ENST00000682562.1 ENST00000683284.1 ENST00000683427.1 ENST00000683454.1 ENST00000683713.1 |
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| CDS CCA 90 bp | TCTTACAGTTTTAGAGGCTGGGAAGTCGAAGATCAAGGAAGGCACTaGCAGGTTCGATGTCTGGTGAAGGCCCGGTCTCGGCTTCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: SYSFRGWEVEDQGRH*QVRCLVKARSRLPR Trigger: TCTTGGAAGCCGAGACCGGGCCTTCACCAGACATCGAACCTGCCAGTGCCTTCCTTGATCTTCGACTTCCCAGCCTCTAAAACTGTAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000464463.6 ENST00000490265.6 ENST00000682562.1 ENST00000683284.1 ENST00000683427.1 ENST00000683713.1 |
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| CDS GCA 90 bp | AAGTCTAAGAGCTACTGGGCTTTCCTAATGCAAAGCCAGTGCACCTaGCCCTCTCTCCTGCAATGCCTCCCCGTGATGCTACAAGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: KSKSYWAFLMQSQCT*PSLLQCLPVMLQER Trigger: TCTTTCTTGTAGCATCACGGGGAGGCATTGCAGGAGAGAGGGGCAGGTGCACTGGCTTTGCATTAGGAAAGCCCAGTAGCTCTTAGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000464463.6 ENST00000683055.1 |
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| CDS GCA 90 bp | TCAGCTCCTACCCTATCTGACTTGTCAATTTGTATATCCATAATATaGAGTGGCTTGAAGCAGGGCTCCCCACCGTGGCTGCATGTTACA | + |
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Preference number: 5 (lower is better) Translates to: SAPTLSDLSICISII*SGLKQGSPPWLHVT Trigger: TGTAACATGCAGCCACGGTGGGGAGCCCTGCTTCAAGCCACTGCATATTATGGATATACAAATTGACAAGTCAGATAGGGTAGGAGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS CCA 90 bp | TGTATATCCATAATATGCAGTGGCTTGAAGCAGGGCTCCCCACCGTaGCTGCATGTTACAGCCATCAAGGCAGCACTATGTTATACTGAT | + |
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Preference number: 5 (lower is better) Translates to: CISIICSGLKQGSPP*LHVTAIKAALCYTD Trigger: ATCAGTATAACATAGTGCTGCCTTGATGGCTGTAACATGCAGCCACGGTGGGGAGCCCTGCTTCAAGCCACTGCATATTATGGATATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS TCA 90 bp | ATGCCTTTTAAGGCATCTGCCGCACCTCTGACTTTGTACACCAATTaGCTCCCCTCCCTGAGCTCAATGTACTTACGAAAGGTGTACAAT | + |
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Preference number: 5 (lower is better) Translates to: MPFKASAAPLTLYTN*LPSLSSMYLRKVYN Trigger: ATTGTACACCTTTCGTAAGTACATTGAGCTCAGGGAGGGGAGTCAATTGGTGTACAAAGTCAGAGGTGCGGCAGATGCCTTAAAAGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000683055.1 ENST00000683427.1 |
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| CDS CCA 90 bp | CTTGCAATTTTGGAACTTAACTCCTGGCAGACCAGTAACAGAGCTTaGACAGCAAGGCCACAGACCACAGCATTCATGAGGAAATGTATT | + |
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Preference number: 5 (lower is better) Translates to: LAILELNSWQTSNRA*TARPQTTAFMRKCI Trigger: AATACATTTCCTCATGAATGCTGTGGTCTGTGGCCTTGCTGTCCAAGCTCTGTTACTGGTCTGCCAGGAGTTAAGTTCCAAAATTGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS GCA 90 bp | AATGCTTTCCCCGGAAAAATATGTGGCTCTGCCCTGGAGAACATCTaGAACACAAACGAGGTAAACTCATCACAGTTCAGAATAACCCTT | + |
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Preference number: 5 (lower is better) Translates to: NAFPGKICGSALENI*NTNEVNSSQFRITL Trigger: AAGGGTTATTCTGAACTGTGATGAGTTTACCTCGTTTGTGTTGCAGATGTTCTCCAGGGCAGAGCCACATATTTTTCCGGGGAAAGCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS CCA 90 bp | GTAACTTACAAAGACCAGAAATGTATTTCTTACAGTTTTAGAGGCTaGGAAGTCGAAGATCAAGGAAGGCACTGGCAGGTTCGATGTCTG | + |
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Preference number: 5 (lower is better) Translates to: VTYKDQKCISYSFRG*EVEDQGRHWQVRCL Trigger: CAGACATCGAACCTGCCAGTGCCTTCCTTGATCTTCGACTTCCCAGCCTCTAAAACTGTAAGAAATACATTTCTGGTCTTTGTAAGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000464463.6 ENST00000490265.6 ENST00000682562.1 ENST00000683284.1 ENST00000683427.1 ENST00000683713.1 |
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| CDS CCA 90 bp | AGCTTTTACCAGCCTATTGAAGCCAATGATTCTGGCACTCAACCTTaGTTAACTGGCGCCTGTGTTAACTTACCACATGTAGTTTACAGA | + |
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Preference number: 5 (lower is better) Translates to: SFYQPIEANDSGTQP*LTGACVNLPHVVYR Trigger: TCTGTAAACTACATGTGGTAAGTTAACACAGGCGCCAGTTAACCAAGGTTGAGTGCCAGAATCATTGGCTTCAATAGGCTGGTAAAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS CCA 90 bp | GTCACTTCATATGGTCCAACACATTTGGTGAGAATCCTTAAGAAGTaGAGGGCTTTTCCTTTGGGCAATAATTTAGAGGTGATCCCAAAC | + |
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Preference number: 5 (lower is better) Translates to: VTSYGPTHLVRILKK*RAFPLGNNLEVIPN Trigger: GTTTGGGATCACCTCTAAATTATTGCCCAAAGGAAAAGCCCTCCACTTCTTAAGGATTCTCACCAAATGTGTTGGACCATATGAAGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS CCA 90 bp | ACTCCGTCAAATTGCCATGAAAGTTTGAGTGTATACTTGCAATTTTaGAACTTAACTCCTGGCAGACCAGTAACAGAGCTTGGACAGCAA | + |
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Preference number: 5 (lower is better) Translates to: TPSNCHESLSVYLQF*NLTPGRPVTELGQQ Trigger: TTGCTGTCCAAGCTCTGTTACTGGTCTGCCAGGAGTTAAGTTCCAAAATTGCAAGTATACACTCAAACTTTCATGGCAATTTGACGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS TCA 90 bp | TTTGACCTACAAAAATGGTCACTTCATATGGTCCAACACATTTGGTaGGAATCCTTAAGAAGTGGAGGGCTTTTCCTTTGGGCAATAATT | + |
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Preference number: 5 (lower is better) Translates to: FDLQKWSLHMVQHIW*ESLRSGGLFLWAII Trigger: AATTATTGCCCAAAGGAAAAGCCCTCCACTTCTTAAGGATTCTCACCAAATGTGTTGGACCATATGAAGTGACCATTTTTGTAGGTCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS GCA 90 bp | TGGCCTATTGTTCAAATGGGGCTATTTATTCCAAAATGCTTGTTCTaGAGACAGCAGATCCATCAATTCTTAATGAAGAACATAGCCTAC | + |
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Preference number: 5 (lower is better) Translates to: WPIVQMGLFIPKCLF*RQQIHQFLMKNIAY Trigger: GTAGGCTATGTTCTTCATTAAGAATTGATGGATCTGCTGTCTGCAGAACAAGCATTTTGGAATAAATAGCCCCATTTGAACAATAGGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS CAA 90 bp | ACCATGAGGCCAGAGCATGAAGAGAAGGCAGGCCTGTGCCCAGTCTaGCAGAGAAGAGCTGCAAAGGAGACAGATGAAGCAGCACCCCAC | + |
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Preference number: 6 (lower is better) Translates to: TMRPEHEEKAGLCPV*QRRAAKETDEAAPH Trigger: GTGGGGTGCTGCTTCATCTGTCTCCTTTGCAGCTCTTCTCTGCAAGACTGGGCACAGGCCTGCCTTCTCTTCATGCTCTGGCCTCATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS TCA 72 bp | AAGATCAAGGAAGGCACTGGCAGGTTCGATGTCTGGTaGAGGCCCGGTCTCGGCTTCCAAGATGGTGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: KIKEGTGRFDVW*RPGLGFQDGAL Trigger: CAAGGCACCATCTTGGAAGCCGAGACCGGGCCTTCACCAGACATCGAACCTGCCAGTGCCTTCCTTGATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000464463.6 ENST00000490265.6 ENST00000682562.1 ENST00000683284.1 ENST00000683427.1 ENST00000683454.1 ENST00000683713.1 |
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| CDS GCA 72 bp | AGCTACTGGGCTTTCCTAATGCAAAGCCAGTGCACCTaGCCCTCTCTCCTGCAATGCCTCCCCGTGATGCTA | + |
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Preference number: 6 (lower is better) Translates to: SYWAFLMQSQCT*PSLLQCLPVML Trigger: TAGCATCACGGGGAGGCATTGCAGGAGAGAGGGGCAGGTGCACTGGCTTTGCATTAGGAAAGCCCAGTAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000464463.6 ENST00000683055.1 |
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| CDS GCA 72 bp | TGTCTGGTGAAGGCCCGGTCTCGGCTTCCAAGATGGTaGCTTGTTGCTGTGTTCTCCAGAGGGGATCAATGC | + |
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Preference number: 6 (lower is better) Translates to: CLVKARSRLPRW*LVAVFSRGDQC Trigger: GCATTGATCCCCTCTGGAGAACACAGCAACAAGGCACCATCTTGGAAGCCGAGACCGGGCCTTCACCAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000464463.6 ENST00000490265.6 ENST00000682562.1 ENST00000683284.1 ENST00000683427.1 ENST00000683454.1 ENST00000683713.1 |
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| CDS CCA 72 bp | CGATGTCTGGTGAAGGCCCGGTCTCGGCTTCCAAGATaGTGCCTTGTTGCTGTGTTCTCCAGAGGGGATCAA | + |
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Preference number: 6 (lower is better) Translates to: RCLVKARSRLPR*CLVAVFSRGDQ Trigger: TTGATCCCCTCTGGAGAACACAGCAACAAGGCACCATCTTGGAAGCCGAGACCGGGCCTTCACCAGACATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000464463.6 ENST00000490265.6 ENST00000682562.1 ENST00000683284.1 ENST00000683427.1 ENST00000683454.1 ENST00000683713.1 |
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| CDS GCA 72 bp | GAAGGCCCGGTCTCGGCTTCCAAGATGGTGCCTTGTTaGTGTGTTCTCCAGAGGGGATCAATGCAGTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: EGPVSASKMVPC*CVLQRGSMQCL Trigger: AAGACACTGCATTGATCCCCTCTGGAGAACACAGCAACAAGGCACCATCTTGGAAGCCGAGACCGGGCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000464463.6 ENST00000490265.6 ENST00000682562.1 ENST00000683284.1 ENST00000683427.1 ENST00000683454.1 ENST00000683713.1 |
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| CDS GCA 72 bp | GTTCTACATGTCCTATCACCTGTTCATTGTGGCCTGTaGAGGAGCTGGTGCCACCGTCATTGCCCTGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: VLHVLSPVHCGL*RSWCHRHCPGE Trigger: CTCACCAGGGCAATGACGGTGGCACCAGCTCCTGCACAGGCCACAATGAACAGGTGATAGGACATGTAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS CCA 72 bp | AGGCTGGGTCACACGGTTAGCAAGTCTAAGAGCTACTaGGCTTTCCTAATGCAAAGCCAGTGCACCTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: RLGHTVSKSKSY*AFLMQSQCTCP Trigger: GGGGCAGGTGCACTGGCTTTGCATTAGGAAAGCCCAGTAGCTCTTAGACTTGCTAACCGTGTGACCCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464463.6 ENST00000683055.1 |
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| CDS TCA 72 bp | CAGAAAGTTTTTAAAGCTCCTCGGGTGATTCCACCATaGGGCCAGAGCATGAAGAGAAGGCAGGCCTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: QKVFKAPRVIPP*GQSMKRRQACA Trigger: GGCACAGGCCTGCCTTCTCTTCATGCTCTGGCCTCATGGTGGAATCACCCGAGGAGCTTTAAAAACTTTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS GCA 72 bp | TGGTGCCTTGTTGCTGTGTTCTCCAGAGGGGATCAATaGAGTGTCTTCAAATGGTGCAAGGGCAAAAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: WCLVAVFSRGDQ*SVFKWCKGKRA Trigger: GGCCCTTTTGCCCTTGCACCATTTGAAGACACTGCATTGATCCCCTCTGGAGAACACAGCAACAAGGCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000464463.6 ENST00000490265.6 ENST00000682562.1 ENST00000683284.1 ENST00000683427.1 ENST00000683454.1 ENST00000683713.1 |
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| CDS CCA 72 bp | ATAATATGCAGTGGCTTGAAGCAGGGCTCCCCACCGTaGCTGCATGTTACAGCCATCAAGGCAGCACTATGT | + |
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Preference number: 6 (lower is better) Translates to: IICSGLKQGSPP*LHVTAIKAALC Trigger: ACATAGTGCTGCCTTGATGGCTGTAACATGCAGCCACGGTGGGGAGCCCTGCTTCAAGCCACTGCATATTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS CCA 72 bp | TTTTGTAGTTCTACATGTCCTATCACCTGTTCATTGTaGCCTGTGCAGGAGCTGGTGCCACCGTCATTGCCC | + |
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Preference number: 6 (lower is better) Translates to: FCSSTCPITCSL*PVQELVPPSLP Trigger: GGGCAATGACGGTGGCACCAGCTCCTGCACAGGCCACAATGAACAGGTGATAGGACATGTAGAACTACAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS CCA 72 bp | TTGGAACTTAACTCCTGGCAGACCAGTAACAGAGCTTaGACAGCAAGGCCACAGACCACAGCATTCATGAGG | + |
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Preference number: 6 (lower is better) Translates to: LELNSWQTSNRA*TARPQTTAFMR Trigger: CCTCATGAATGCTGTGGTCTGTGGCCTTGCTGTCCAAGCTCTGTTACTGGTCTGCCAGGAGTTAAGTTCCAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS TCA 72 bp | AAGGCATCTGCCGCACCTCTGACTTTGTACACCAATTaGCTCCCCTCCCTGAGCTCAATGTACTTACGAAAG | + |
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Preference number: 6 (lower is better) Translates to: KASAAPLTLYTN*LPSLSSMYLRK Trigger: CTTTCGTAAGTACATTGAGCTCAGGGAGGGGAGTCAATTGGTGTACAAAGTCAGAGGTGCGGCAGATGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000683055.1 ENST00000683427.1 |
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| CDS GCA 72 bp | ACCCTATCTGACTTGTCAATTTGTATATCCATAATATaGAGTGGCTTGAAGCAGGGCTCCCCACCGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TLSDLSICISII*SGLKQGSPPWL Trigger: CAGCCACGGTGGGGAGCCCTGCTTCAAGCCACTGCATATTATGGATATACAAATTGACAAGTCAGATAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS TCA 72 bp | AACTGGCATCCGAAGTGGTGGGGTCTGTTAAGAACATaGGGCGCTATAGTTTGTACTAACATCCTATTGGGG | + |
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Preference number: 6 (lower is better) Translates to: NWHPKWWGLLRT*GAIVCTNILLG Trigger: CCCCAATAGGATGTTAGTACAAACTATAGCGCCTCATGTTCTTAACAGACCCCACCACTTCGGATGCCAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS TCA 72 bp | ACAGCCATCAAGGCAGCACTATGTTATACTGATGGCTaGGGCCCAGCCCTTAGGTATTCAGATTTAATCGAT | + |
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Preference number: 6 (lower is better) Translates to: TAIKAALCYTDG*GPALRYSDLID Trigger: ATCGATTAAATCTGAATACCTAAGGGCTGGGCCTCAGCCATCAGTATAACATAGTGCTGCCTTGATGGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS CCA 72 bp | CAGCCTATTGAAGCCAATGATTCTGGCACTCAACCTTaGTTAACTGGCGCCTGTGTTAACTTACCACATGTA | + |
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Preference number: 6 (lower is better) Translates to: QPIEANDSGTQP*LTGACVNLPHV Trigger: TACATGTGGTAAGTTAACACAGGCGCCAGTTAACCAAGGTTGAGTGCCAGAATCATTGGCTTCAATAGGCTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS GCA 72 bp | CCTTTTATAAGGTCACTAATCCCACTCTTAGTCACCTaGAAAAGGTGCCACCTCTTAATTCTATCACACGGG | + |
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Preference number: 6 (lower is better) Translates to: PFIRSLIPLLVT*KRCHLLILSHG Trigger: CCCGTGTGATAGAATTAAGAGGTGGCACCTTTTGCAGGTGACTAAGAGTGGGATTAGTGACCTTATAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000464463.6 ENST00000490265.6 ENST00000682562.1 ENST00000683284.1 ENST00000683427.1 ENST00000683713.1 |
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| CDS CAA 72 bp | TTTGACCTCAATGTGATAAAATGCTTTATGAGGGGGTaGTCCTGCAGTAACTATAGGGAAAGCCTGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: FDLNVIKCFMRG*SCSNYRESLAL Trigger: CAAAGCCAGGCTTTCCCTATAGTTACTGCAGGACAACCCCCTCATAAAGCATTTTATCACATTGAGGTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS CCA 72 bp | CTCCCTGAGCTCAATGTACTTACGAAAGGTGTACAATaGAGCAACCAGTTCAGAGAATCAAGTCATACTTAT | + |
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Preference number: 6 (lower is better) Translates to: LPELNVLTKGVQ*SNQFRESSHTY Trigger: ATAAGTATGACTTGATTCTCTGAACTGGTTGCTCCATTGTACACCTTTCGTAAGTACATTGAGCTCAGGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000683055.1 ENST00000683427.1 |
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| CDS CAA 72 bp | TTGGTGAGAATCCTTAAGAAGTGGAGGGCTTTTCCTTaGGGCAATAATTTAGAGGTGATCCCAAACCTAGAA | + |
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Preference number: 6 (lower is better) Translates to: LVRILKKWRAFP*GNNLEVIPNLE Trigger: TTCTAGGTTTGGGATCACCTCTAAATTATTGCCCAAAGGAAAAGCCCTCCACTTCTTAAGGATTCTCACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS CCA 72 bp | AATTGCCATGAAAGTTTGAGTGTATACTTGCAATTTTaGAACTTAACTCCTGGCAGACCAGTAACAGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: NCHESLSVYLQF*NLTPGRPVTEL Trigger: AAGCTCTGTTACTGGTCTGCCAGGAGTTAAGTTCCAAAATTGCAAGTATACACTCAAACTTTCATGGCAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS GCA 72 bp | TCAGGCTGTTTAAATCTCTTATGGACTAGTTGGCTTTaGTTTTGGCCTATTGTTCAAATGGGGCTATTTATT | + |
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Preference number: 6 (lower is better) Translates to: SGCLNLLWTSWL*FWPIVQMGLFI Trigger: AATAAATAGCCCCATTTGAACAATAGGCCAAAAGCAAAGCCAACTAGTCCATAAGAGATTTAAACAGCCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS CAA 90 bp | GGGTCCAAAAGAAGAACAGTTCTGATTCTGAAGGCAATATTCTTTTaGCTAAACCACCCTGCTTGTCCTGTATATTTATATATCTATCAA | + |
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Preference number: 6 (lower is better) Translates to: GSKRRTVLILKAIFF*LNHPACPVYLYIYQ Trigger: TTGATAGATATATAAATATACAGGACAAGCAGGGTGGTTTAGCAAAAAGAATATTGCCTTCAGAATCAGAACTGTTCTTCTTTTGGACCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000464463.6 ENST00000683055.1 |
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| CDS CCA 72 bp | TGTTTAAATCTCTTATGGACTAGTTGGCTTTGCTTTTaGCCTATTGTTCAAATGGGGCTATTTATTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: CLNLLWTSWLCF*PIVQMGLFIPK Trigger: TTTTGGAATAAATAGCCCCATTTGAACAATAGGCCAAAAGCAAAGCCAACTAGTCCATAAGAGATTTAAACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683454.1 |
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| CDS CAA 72 bp | AGAAGAACAGTTCTGATTCTGAAGGCAATATTCTTTTaGCTAAACCACCCTGCTTGTCCTGTATATTTATAT | + |
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Preference number: 6 (lower is better) Translates to: RRTVLILKAIFF*LNHPACPVYLY Trigger: ATATAAATATACAGGACAAGCAGGGTGGTTTAGCAAAAAGAATATTGCCTTCAGAATCAGAACTGTTCTTCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000464463.6 ENST00000683055.1 |
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