Pregenerated sensors for OFCC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000181355Ensembl transcript IDs: ENST00000460066.5, ENST00000460363.6, ENST00000462111.1, ENST00000466385.1, ENST00000469421.5, ENST00000469426.5, ENST00000469656.5, ENST00000472329.5, ENST00000481704.1, ENST00000485268.1, ENST00000486246.5, ENST00000487015.5, ENST00000491508.1, ENST00000492094.6, ENST00000492169.5, ENST00000642964.1
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCATTGTGCCTGACGGAGTGTTTTCTGGTCTTTAGTTGCTCCGTTTaGCACCACTGCAAGACACAGCCTCCCAGTCGACCAAGCAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: PLCLTECFLVFSCSV*HHCKTQPPSRPSRD Trigger: GTCCCTGCTTGGTCGACTGGGAGGCTGTGTCTTGCAGTGGTGGCAAACGGAGCAACTAAAGACCAGAAAACACTCCGTCAGGCACAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000469426.5 ENST00000469656.5 ENST00000487015.5 ENST00000492094.6 ENST00000642964.1 |
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| CDS GCA 90 bp | CTGACGGAGTGTTTTCTGGTCTTTAGTTGCTCCGTTTGCCACCACTaGAAGACACAGCCTCCCAGTCGACCAAGCAGGGACACTTGGACA | + |
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Preference number: 5 (lower is better) Translates to: LTECFLVFSCSVCHH*KTQPPSRPSRDTWT Trigger: TGTCCAAGTGTCCCTGCTTGGTCGACTGGGAGGCTGTGTCTTGCAGTGGTGGCAAACGGAGCAACTAAAGACCAGAAAACACTCCGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000469426.5 ENST00000469656.5 ENST00000487015.5 ENST00000492094.6 ENST00000642964.1 |
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| CDS GCA 90 bp | GCCCTTGGCAATGCACAGATTTCAATCCAGTCTCTCACGAAGGTCTaGAGCTTCACTGCTGAGCCAGCGAGATCACGAACTCACCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: ALGNAQISIQSLTKV*SFTAEPARSRTHQK Trigger: CTTCTGGTGAGTTCGTGATCTCGCTGGCTCAGCAGTGAAGCTGCAGACCTTCGTGAGAGACTGGATTGAAATCTGTGCATTGCCAAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485268.1 |
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| CDS CCA 90 bp | CAGTGGTGGCTTCGCTGGCTTCTTTGTGGATTTCGTGACTCTTATTaGAACTCCCAGGTGCTTCAGAATTCAGAGTCTCCTCCCGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: QWWLRWLLCGFRDSY*NSQVLQNSESPPGH Trigger: GTGGCCGGGAGGAGACTCTGAATTCTGAAGCACCTGGGAGTTCCAATAAGAGTCACGAAATCCACAAAGAAGCCAGCGAAGCCACCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000466385.1 ENST00000469426.5 ENST00000469656.5 ENST00000472329.5 ENST00000486246.5 ENST00000492094.6 ENST00000642964.1 |
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| CDS CCA 90 bp | GCCGTATTCATTTCCTGGCATAGTGCCTTTTGGTTCTGCAGAGGCTaGCAGCCTGAATTTTTGTTGGTGAGCTGCAAGGGTGCGATCCGG | + |
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Preference number: 5 (lower is better) Translates to: AVFISWHSAFWFCRG*QPEFLLVSCKGAIR Trigger: CCGGATCGCACCCTTGCAGCTCACCAACAAAAATTCAGGCTGCCAGCCTCTGCAGAACCAAAAGGCACTATGCCAGGAAATGAATACGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466385.1 |
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| CDS CCA 90 bp | CAGGAGGATGTAAAGCAGCACTGTGATCACCACGCCAAGAATGCCTaGCTGCACGGTTCTTACAAACATCCAGTAGAGCTTCGCGGCATC | + |
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Preference number: 5 (lower is better) Translates to: QEDVKQHCDHHAKNA*LHGSYKHPVELRGI Trigger: GATGCCGCGAAGCTCTACTGGATGTTTGTAAGAACCGTGCAGCCAGGCATTCTTGGCGTGGTGATCACAGTGCTGCTTTACATCCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000492094.6 ENST00000642964.1 |
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| CDS GCA 90 bp | ATGGAAACCAAGGGCAGGGTTCTTTCCAGACTTGTCTCTTCCCCCTaGTACAGCCAAGGCCACGATAAACAGAGTAGGGAAGAGGACACA | + |
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Preference number: 5 (lower is better) Translates to: METKGRVLSRLVSSP*YSQGHDKQSREEDT Trigger: TGTGTCCTCTTCCCTACTCTGTTTATCGTGGCCTTGGCTGTAGCAGGGGGAAGAGACAAGTCTGGAAAGAACCCTGCCCTTGGTTTCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485268.1 |
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| CDS TCA 90 bp | GTGCCTTTTGGTTCTGCAGAGGCTGGCAGCCTGAATTTTTGTTGGTaGGCTGCAAGGGTGCGATCCGGCATGTCGTGTCTAATAACTTTC | + |
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Preference number: 5 (lower is better) Translates to: VPFGSAEAGSLNFCW*AARVRSGMSCLITF Trigger: GAAAGTTATTAGACACGACATGCCGGATCGCACCCTTGCAGCTCACCAACAAAAATTCAGGCTGCCAGCCTCTGCAGAACCAAAAGGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466385.1 |
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| CDS CCA 90 bp | TCTGAGATCTTTGGAACTCCTCAAGGTGAGCAGTGGTGGCTTCGCTaGCTTCTTTGTGGATTTCGTGACTCTTATTGGAACTCCCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: SEIFGTPQGEQWWLR*LLCGFRDSYWNSQV Trigger: CACCTGGGAGTTCCAATAAGAGTCACGAAATCCACAAAGAAGCCAGCGAAGCCACCACTGCTCACCTTGAGGAGTTCCAAAGATCTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000466385.1 ENST00000469426.5 ENST00000469656.5 ENST00000472329.5 ENST00000486246.5 ENST00000492094.6 ENST00000642964.1 |
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| CDS TCA 90 bp | TTTCCTTTTGGTTCTGCAGAGGCTGGCAGCCTGAATTTTTGTTGGTaGGCTGCAAGGGTGCGATCCGGCATGTCGTGTCTAATAACTTTC | + |
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Preference number: 5 (lower is better) Translates to: FPFGSAEAGSLNFCW*AARVRSGMSCLITF Trigger: GAAAGTTATTAGACACGACATGCCGGATCGCACCCTTGCAGCTCACCAACAAAAATTCAGGCTGCCAGCCTCTGCAGAACCAAAAGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000460066.5 ENST00000460363.6 ENST00000469426.5 ENST00000472329.5 ENST00000486246.5 ENST00000487015.5 ENST00000491508.1 ENST00000492094.6 ENST00000492169.5 ENST00000642964.1 |
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| CDS GCA 90 bp | TTTTCCCTCCACTGTATCAAAGTTGTTATTACACAAAGGGAACACTaGTCAGCCCACAGCCCGGTCCAGGCAAGTGTATGTTCCACGAAG | + |
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Preference number: 5 (lower is better) Translates to: FSLHCIKVVITQREH*SAHSPVQASVCSTK Trigger: CTTCGTGGAACATACACTTGCCTGGACCGGGCTGTGGGCTGAGCAGTGTTCCCTTTGTGTAATAACAACTTTGATACAGTGGAGGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000469426.5 ENST00000469656.5 ENST00000492094.6 ENST00000642964.1 |
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| CDS GCA 90 bp | TTTAGGAATGCTCCCCTGAGAAGAGTGTGCTGCGGATTTAACGTCTaGCTCATCCATTGGTGCACGAGGATTCTTCTGTGTTTCCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: FRNAPLRRVCCGFNV*LIHWCTRILLCFLL Trigger: GAGAAGGAAACACAGAAGAATCCTCGTGCACCAATGGATGAGGCAGACGTTAAATCCGCAGCACACTCTTCTCAGGGGAGCATTCCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000460363.6 ENST00000492094.6 ENST00000642964.1 |
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| CDS CCA 90 bp | TTTAGGAATGCTCCCTTCTCTGCTGACCTCCGTCGCACACTGCCTTaGGTTTATTTCCTCATCCATCAGTGGGTCAAAGTAATTTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: FRNAPFSADLRRTLP*VYFLIHQWVKVISA Trigger: GGCAGAAATTACTTTGACCCACTGATGGATGAGGAAATAAACCCAAGGCAGTGTGCGACGGAGGTCAGCAGAGAAGGGAGCATTCCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460066.5 |
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| CDS CCA 90 bp | GACCTCCGTCGCACACTGCCTTGGGTTTATTTCCTCATCCATCAGTaGGTCAAAGTAATTTCTGCCGTATTCATTTCCTGGCATAGTGCC | + |
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Preference number: 5 (lower is better) Translates to: DLRRTLPWVYFLIHQ*VKVISAVFISWHSA Trigger: GGCACTATGCCAGGAAATGAATACGGCAGAAATTACTTTGACCCACTGATGGATGAGGAAATAAACCCAAGGCAGTGTGCGACGGAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466385.1 |
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| CDS TCA 90 bp | TCAAACGAGCCTCCCAGGATGCTGTCCGTTTTGCTTATATGCTCCTaGATAGCTGTGATCACTTCACTGTGGACAAGCTTTAAGCCACTG | + |
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Preference number: 5 (lower is better) Translates to: SNEPPRMLSVLLICS*IAVITSLWTSFKPL Trigger: CAGTGGCTTAAAGCTTGTCCACAGTGAAGTGATCACAGCTATTCAGGAGCATATAAGCAAAACGGACAGCATCCTGGGAGGCTCGTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000469421.5 ENST00000492094.6 ENST00000642964.1 |
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| CDS CCA 90 bp | CTCTCATCAAAAAGCTTCTCTGCTGACCTCCGTCGCACACTGCCTTaGGTTTATTTCCTCATCCATCAGTGGGTCAAAGTAATTTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LSSKSFSADLRRTLP*VYFLIHQWVKVISA Trigger: GGCAGAAATTACTTTGACCCACTGATGGATGAGGAAATAAACCCAAGGCAGTGTGCGACGGAGGTCAGCAGAGAAGCTTTTTGATGAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000486246.5 |
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| CDS GCA 90 bp | GTGCACAACCTTTGCCTTCAAGGAGACTGCAACATAGAAGGGAACTaGTTCAAACAGAAAATCGGTGTTCCTCCAGTTCCTCCAAGTAAG | + |
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Preference number: 5 (lower is better) Translates to: VHNLCLQGDCNIEGN*FKQKIGVPPVPPSK Trigger: CTTACTTGGAGGAACTGGAGGAACACCGATTTTCTGTTTGAAGCAGTTCCCTTCTATGTTGCAGTCTCCTTGAAGGCAAAGGTTGTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460066.5 |
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| CDS GCA 90 bp | GTTCTCAGCGATACTGGGCTTCAAAACATGACAGTGCACAACCTTTaGCTTCAAGGAGACTGCAACATAGAAGGGAACTGCTTCAAACAG | + |
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Preference number: 5 (lower is better) Translates to: VLSDTGLQNMTVHNL*LQGDCNIEGNCFKQ Trigger: CTGTTTGAAGCAGTTCCCTTCTATGTTGCAGTCTCCTTGAAGGCAAAGGTTGTGCACTGTCATGTTTTGAAGCCCAGTATCGCTGAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460066.5 |
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| CDS CCA 90 bp | GACCTCCGTCGCACACTGCCTTGGGTTTATTTCCTCATCCATCAGTaGGTCAAAGTAATTTCTGCCGTATTCATTTCCTTTTGGTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: DLRRTLPWVYFLIHQ*VKVISAVFISFWFC Trigger: GCAGAACCAAAAGGAAATGAATACGGCAGAAATTACTTTGACCCACTGATGGATGAGGAAATAAACCCAAGGCAGTGTGCGACGGAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000460066.5 ENST00000460363.6 ENST00000469426.5 ENST00000472329.5 ENST00000486246.5 ENST00000487015.5 ENST00000491508.1 ENST00000492094.6 ENST00000492169.5 ENST00000642964.1 |
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| CDS CCA 90 bp | AATTCTATCGTCATCTTCTCTGCTGACCTCCGTCGCACACTGCCTTaGGTTTATTTCCTCATCCATCAGTGGGTCAAAGTAATTTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: NSIVIFSADLRRTLP*VYFLIHQWVKVISA Trigger: GGCAGAAATTACTTTGACCCACTGATGGATGAGGAAATAAACCCAAGGCAGTGTGCGACGGAGGTCAGCAGAGAAGATGACGATAGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000466385.1 ENST00000469426.5 ENST00000472329.5 |
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| CDS CCA 90 bp | TCGAATTTCAAATCCTTCTCTGCTGACCTCCGTCGCACACTGCCTTaGGTTTATTTCCTCATCCATCAGTGGGTCAAAGTAATTTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: SNFKSFSADLRRTLP*VYFLIHQWVKVISA Trigger: GGCAGAAATTACTTTGACCCACTGATGGATGAGGAAATAAACCCAAGGCAGTGTGCGACGGAGGTCAGCAGAGAAGGATTTGAAATTCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487015.5 |
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| CDS GCA 90 bp | GGGCTTCAAAACATGACAGTGCACAACCTTTGCCTTCAAGGAGACTaGAACATAGAAGGGAACTGCTTCAAACAGAAAATCGGTGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: GLQNMTVHNLCLQGD*NIEGNCFKQKIGVP Trigger: AGGAACACCGATTTTCTGTTTGAAGCAGTTCCCTTCTATGTTGCAGTCTCCTTGAAGGCAAAGGTTGTGCACTGTCATGTTTTGAAGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460066.5 |
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| CDS TCA 90 bp | AAATGTCCCGTCTTTAGTTCCTGGCTTCTTCAAGTTGCTTTGTCCTaGGGTCTTTGCCCTTTAAAGTTACACCTTTGGCGTCTCCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: KCPVFSSWLLQVALS*GLCPLKLHLWRLQS Trigger: ACTTTGGAGACGCCAAAGGTGTAACTTTAAAGGGCAAAGACCTCAGGACAAAGCAACTTGAAGAAGCCAGGAACTAAAGACGGGACATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000462111.1 ENST00000481704.1 |
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| CDS TCA 90 bp | GAACTTCCCGACACAGTGAACATAAGAACATTGCGAGCACTGACCTaGGAATGGGTTTTAGAATCTTTGCTCTCTATAGTACCTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: ELPDTVNIRTLRALT*EWVLESLLSIVPPA Trigger: AGCAGGAGGTACTATAGAGAGCAAAGATTCTAAAACCCATTCTCAGGTCAGTGCTCGCAATGTTCTTATGTTCACTGTGTCGGGAAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472329.5 |
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| CDS GCA 90 bp | CAAGTGTATGTTCCACGAAGAAGAAAGAGTTCAAACAAGAAACCATaGCAGGGCTCACATTTTTCCTTTGAGGGAGCACCACATAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: QVYVPRRRKSSNKKP*QGSHFSFEGAPHKG Trigger: ACCTTTATGTGGTGCTCCCTCAAAGGAAAAATGTGAGCCCTGGCATGGTTTCTTGTTTGAACTCTTTCTTCTTCGTGGAACATACACTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000469426.5 ENST00000469656.5 ENST00000492094.6 ENST00000642964.1 |
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| CDS CCA 90 bp | GCTGCTCCCTTTGAGTCATTAGTTACTTCTGTGAGGGTACCAAGCTaGGCTGCACTGTCCTTTTTACAAATATTTAGGTCTGCAATGAAT | + |
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Preference number: 5 (lower is better) Translates to: AAPFESLVTSVRVPS*AALSFLQIFRSAMN Trigger: ATTCATTGCAGACCTAAATATTTGTAAAAAGGACAGTGCAGCCCAGCTTGGTACCCTCACAGAAGTAACTAATGACTCAAAGGGAGCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000469426.5 ENST00000469656.5 ENST00000486246.5 ENST00000487015.5 ENST00000492094.6 ENST00000642964.1 |
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| CDS TCA 90 bp | ACTGAAGTTCTGAAGACGCTGATACCAGCACAAAATGGAGATGCTTaGAGAAGTCTCCATATCTACTATCAGCAACTGAAGAACAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: TEVLKTLIPAQNGDA*RSLHIYYQQLKNSK Trigger: TTTGCTGTTCTTCAGTTGCTGATAGTAGATATGGAGACTTCTTCAAGCATCTCCATTTTGTGCTGGTATCAGCGTCTTCAGAACTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000460363.6 ENST00000487015.5 ENST00000492094.6 ENST00000642964.1 |
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| CDS TCA 90 bp | CTGCTTCTGATTACAGCAGTTACTTTGAGCAAGAGTATCCATGGATaGCTCATCTCATCCTCCATACAATGCAATGAAGTAGATCTAATT | + |
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Preference number: 5 (lower is better) Translates to: LLLITAVTLSKSIHG*LISSSIQCNEVDLI Trigger: AATTAGATCTACTTCATTGCATTGTATGGAGGATGAGATGAGTCATCCATGGATACTCTTGCTCAAAGTAACTGCTGTAATCAGAAGCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000466385.1 ENST00000469426.5 ENST00000469656.5 ENST00000472329.5 |
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| CDS TCA 72 bp | GGTTCTGCAGAGGCTGGCAGCCTGAATTTTTGTTGGTaGGCTGCAAGGGTGCGATCCGGCATGTCGTGTCTA | + |
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Preference number: 6 (lower is better) Translates to: GSAEAGSLNFCW*AARVRSGMSCL Trigger: TAGACACGACATGCCGGATCGCACCCTTGCAGCTCACCAACAAAAATTCAGGCTGCCAGCCTCTGCAGAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENST00000460066.5 ENST00000460363.6 ENST00000466385.1 ENST00000469426.5 ENST00000472329.5 ENST00000486246.5 ENST00000487015.5 ENST00000491508.1 ENST00000492094.6 ENST00000492169.5 ENST00000642964.1 |
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| CDS GCA 72 bp | GAGGGAGCACCTTCTCTGCTGACCTCCGTCGCACACTaGCTTGGGTTTATTTCCTCATCCATCAGTGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: EGAPSLLTSVAH*LGFISSSISGS Trigger: TGACCCACTGATGGATGAGGAAATAAACCCAAGGCAGTGTGCGACGGAGGTCAGCAGAGAAGGTGCTCCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492169.5 |
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| CDS TCA 72 bp | ACGCAGGAACTTCCAGCGGGGTCCTGCTGCTCCCTTTaGGTCATTAGTTACTTCTGTGAGGGTACCAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: TQELPAGSCCSL*VISYFCEGTKL Trigger: CAGCTTGGTACCCTCACAGAAGTAACTAATGACTCAAAGGGAGCAGCAGGACCCCGCTGGAAGTTCCTGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000469426.5 ENST00000486246.5 ENST00000487015.5 ENST00000492094.6 ENST00000642964.1 |
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| CDS GCA 72 bp | CCATTGTGCCTGACGGAGTGTTTTCTGGTCTTTAGTTaGTCCGTTTGCCACCACTGCAAGACACAGCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: PLCLTECFLVFS*SVCHHCKTQPP Trigger: GGGAGGCTGTGTCTTGCAGTGGTGGCAAACGGAGCAACTAAAGACCAGAAAACACTCCGTCAGGCACAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000469426.5 ENST00000469656.5 ENST00000487015.5 ENST00000492094.6 ENST00000642964.1 |
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| CDS GCA 72 bp | GGAATGCTCCCTTCTCTGCTGACCTCCGTCGCACACTaGCTTGGGTTTATTTCCTCATCCATCAGTGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: GMLPSLLTSVAH*LGFISSSISGS Trigger: TGACCCACTGATGGATGAGGAAATAAACCCAAGGCAGTGTGCGACGGAGGTCAGCAGAGAAGGGAGCATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460066.5 |
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| CDS CAA 72 bp | TTTTGGTTCTGCAGAGGCTGGCAGCCTGAATTTTTGTaGGTGAGCTGCAAGGGTGCGATCCGGCATGTCGTG | + |
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Preference number: 6 (lower is better) Translates to: FWFCRGWQPEFL*VSCKGAIRHVV Trigger: CACGACATGCCGGATCGCACCCTTGCAGCTCACCAACAAAAATTCAGGCTGCCAGCCTCTGCAGAACCAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 11 transcripts: ENST00000460066.5 ENST00000460363.6 ENST00000466385.1 ENST00000469426.5 ENST00000472329.5 ENST00000486246.5 ENST00000487015.5 ENST00000491508.1 ENST00000492094.6 ENST00000492169.5 ENST00000642964.1 |
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| CDS GCA 72 bp | GCTCCCCTGAGAAGAGTGTGCTGCGGATTTAACGTCTaGCTCATCCATTGGTGCACGAGGATTCTTCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: APLRRVCCGFNV*LIHWCTRILLC Trigger: ACACAGAAGAATCCTCGTGCACCAATGGATGAGGCAGACGTTAAATCCGCAGCACACTCTTCTCAGGGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000460363.6 ENST00000492094.6 ENST00000642964.1 |
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| CDS GCA 72 bp | CCACTCTCATCTTCTCTGCTGACCTCCGTCGCACACTaGCTTGGGTTTATTTCCTCATCCATCAGTGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: PLSSSLLTSVAH*LGFISSSISGS Trigger: TGACCCACTGATGGATGAGGAAATAAACCCAAGGCAGTGTGCGACGGAGGTCAGCAGAGAAGATGAGAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000491508.1 ENST00000492094.6 ENST00000642964.1 |
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| CDS CAA 90 bp | CATAGTGCCTTTTGGTTCTGCAGAGGCTGGCAGCCTGAATTTTTGTaGGTGAGCTGCAAGGGTGCGATCCGGCATGTCGTGTCTAATAAC | + |
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Preference number: 6 (lower is better) Translates to: HSAFWFCRGWQPEFL*VSCKGAIRHVVSNN Trigger: GTTATTAGACACGACATGCCGGATCGCACCCTTGCAGCTCACCAACAAAAATTCAGGCTGCCAGCCTCTGCAGAACCAAAAGGCACTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466385.1 |
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| CDS TCA 72 bp | GTAGGGAAGAGGACACAGACCAAATGGGATTCTGGGTaGGACGAAGATGATCAGCTCCCTTCAGTTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: VGKRTQTKWDSG*DEDDQLPSVSC Trigger: GCAGGAAACTGAAGGGAGCTGATCATCTTCGTCTCACCCAGAATCCCATTTGGTCTGTGTCCTCTTCCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485268.1 |
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| CDS GCA 72 bp | CTATCGTCATCTTCTCTGCTGACCTCCGTCGCACACTaGCTTGGGTTTATTTCCTCATCCATCAGTGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: LSSSSLLTSVAH*LGFISSSISGS Trigger: TGACCCACTGATGGATGAGGAAATAAACCCAAGGCAGTGTGCGACGGAGGTCAGCAGAGAAGATGACGATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000466385.1 ENST00000469426.5 ENST00000472329.5 |
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| CDS CAA 90 bp | ACAGATTTCAATCCAGTCTCTCCAAGGGCAGGGTTCTTTCCAGACTaGTCTCTTCCCCCTGCTACAGCCAAGGCCACGATAAACAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: TDFNPVSPRAGFFPD*SLPPATAKATINRV Trigger: TACTCTGTTTATCGTGGCCTTGGCTGTAGCAGGGGGAAGAGACAAGTCTGGAAAGAACCCTGCCCTTGGAGAGACTGGATTGAAATCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000472329.5 |
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| CDS CAA 90 bp | ATTTCAGCAGAGAGATGGAAACCAAGGGCAGGGTTCTTTCCAGACTaGTCTCTTCCCCCTGCTACAGCCAAGGCCACGATAAACAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: ISAERWKPRAGFFPD*SLPPATAKATINRV Trigger: TACTCTGTTTATCGTGGCCTTGGCTGTAGCAGGGGGAAGAGACAAGTCTGGAAAGAACCCTGCCCTTGGTTTCCATCTCTCTGCTGAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485268.1 |
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| CDS TCA 72 bp | TTTATCTCTCTTCCAGCGGGGTCCTGCTGCTCCCTTTaGGTCATTAGTTACTTCTGTGAGGGTACCAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: FISLPAGSCCSL*VISYFCEGTKL Trigger: CAGCTTGGTACCCTCACAGAAGTAACTAATGACTCAAAGGGAGCAGCAGGACCCCGCTGGAAGAGAGATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469656.5 |
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| CDS GCA 72 bp | CATCAAAAAGCTTCTCTGCTGACCTCCGTCGCACACTaGCTTGGGTTTATTTCCTCATCCATCAGTGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: HQKASLLTSVAH*LGFISSSISGS Trigger: TGACCCACTGATGGATGAGGAAATAAACCCAAGGCAGTGTGCGACGGAGGTCAGCAGAGAAGCTTTTTGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000486246.5 |
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| CDS GCA 72 bp | AATGCACAGATTTCAATCCAGTCTCTCACGAAGGTCTaGAGCTTCACTGCTGAGCCAGCGAGATCACGAACT | + |
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Preference number: 6 (lower is better) Translates to: NAQISIQSLTKV*SFTAEPARSRT Trigger: AGTTCGTGATCTCGCTGGCTCAGCAGTGAAGCTGCAGACCTTCGTGAGAGACTGGATTGAAATCTGTGCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485268.1 |
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| CDS CCA 72 bp | ATTTCCTGGCATAGTGCCTTTTGGTTCTGCAGAGGCTaGCAGCCTGAATTTTTGTTGGTGAGCTGCAAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: ISWHSAFWFCRG*QPEFLLVSCKG Trigger: ACCCTTGCAGCTCACCAACAAAAATTCAGGCTGCCAGCCTCTGCAGAACCAAAAGGCACTATGCCAGGAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466385.1 |
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| CDS CCA 72 bp | GTAAAGCAGCACTGTGATCACCACGCCAAGAATGCCTaGCTGCACGGTTCTTACAAACATCCAGTAGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VKQHCDHHAKNA*LHGSYKHPVEL Trigger: AAGCTCTACTGGATGTTTGTAAGAACCGTGCAGCCAGGCATTCTTGGCGTGGTGATCACAGTGCTGCTTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000492094.6 ENST00000642964.1 |
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| CDS CAA 72 bp | CTTGTCTTTAAGGCCCCTCAGGCATCTGATCTGGATTaGCAGAGGCTGAGGTGGTTGAGACTGCTCATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LVFKAPQASDLD*QRLRWLRLLIF Trigger: GAAAATGAGCAGTCTCAACCACCTCAGCCTCTGCAAATCCAGATCAGATGCCTGAGGGGCCTTAAAGACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000469426.5 ENST00000469656.5 ENST00000486246.5 ENST00000487015.5 ENST00000492094.6 ENST00000642964.1 |
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| CDS CAA 90 bp | TTCATTTCCTTTTGGTTCTGCAGAGGCTGGCAGCCTGAATTTTTGTaGGTGAGCTGCAAGGGTGCGATCCGGCATGTCGTGTCTAATAAC | + |
|
Preference number: 6 (lower is better) Translates to: FISFWFCRGWQPEFL*VSCKGAIRHVVSNN Trigger: GTTATTAGACACGACATGCCGGATCGCACCCTTGCAGCTCACCAACAAAAATTCAGGCTGCCAGCCTCTGCAGAACCAAAAGGAAATGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000460066.5 ENST00000460363.6 ENST00000469426.5 ENST00000472329.5 ENST00000486246.5 ENST00000487015.5 ENST00000491508.1 ENST00000492094.6 ENST00000492169.5 ENST00000642964.1 |
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| CDS TCA 72 bp | CATCACAACCACGGGAAGCTCTTCTCCAATGTGAAGTaGGGAAGTTGGGTAGCAAAGCTCAACGATGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: HHNHGKLFSNVK*GSWVAKLNDVK Trigger: CTTCACATCGTTGAGCTTTGCTACCCAACTTCCTCACTTCACATTGGAGAAGAGCTTCCCGTGGTTGTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000492094.6 ENST00000642964.1 |
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| CDS GCA 72 bp | ATTAGACAAACTTCTCTGCTGACCTCCGTCGCACACTaGCTTGGGTTTATTTCCTCATCCATCAGTGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: IRQTSLLTSVAH*LGFISSSISGS Trigger: TGACCCACTGATGGATGAGGAAATAAACCCAAGGCAGTGTGCGACGGAGGTCAGCAGAGAAGTTTGTCTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460363.6 |
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| CDS GCA 72 bp | ATTTCAAATCCTTCTCTGCTGACCTCCGTCGCACACTaGCTTGGGTTTATTTCCTCATCCATCAGTGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ISNPSLLTSVAH*LGFISSSISGS Trigger: TGACCCACTGATGGATGAGGAAATAAACCCAAGGCAGTGTGCGACGGAGGTCAGCAGAGAAGGATTTGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487015.5 |
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| CDS GCA 72 bp | TCTCTCTCCATGTTCTCAGCTTCTTGCCCTTGGCAATaGACAGATTTCAATCCAGTCTCTCACGAAGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLSMFSASCPWQ*TDFNPVSHEGL Trigger: CAGACCTTCGTGAGAGACTGGATTGAAATCTGTGCATTGCCAAGGGCAAGAAGCTGAGAACATGGAGAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485268.1 |
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| CDS CCA 72 bp | TCTGCCGTATTCATTTCCTTTTGGTTCTGCAGAGGCTaGCAGCCTGAATTTTTGTTGGTGAGCTGCAAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SAVFISFWFCRG*QPEFLLVSCKG Trigger: ACCCTTGCAGCTCACCAACAAAAATTCAGGCTGCCAGCCTCTGCAGAACCAAAAGGAAATGAATACGGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000460066.5 ENST00000460363.6 ENST00000469426.5 ENST00000472329.5 ENST00000486246.5 ENST00000487015.5 ENST00000491508.1 ENST00000492094.6 ENST00000492169.5 ENST00000642964.1 |
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| CDS CCA 72 bp | TTTGGAACTCCTCAAGGTGAGCAGTGGTGGCTTCGCTaGCTTCTTTGTGGATTTCGTGACTCTTATTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: FGTPQGEQWWLR*LLCGFRDSYWN Trigger: GTTCCAATAAGAGTCACGAAATCCACAAAGAAGCCAGCGAAGCCACCACTGCTCACCTTGAGGAGTTCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000466385.1 ENST00000469426.5 ENST00000469656.5 ENST00000472329.5 ENST00000486246.5 ENST00000492094.6 ENST00000642964.1 |
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| CDS CCA 72 bp | GCCACTGCATGTGTCTGTCATTGTTCTCAGCGATACTaGGCTTCAAAACATGACAGTGCACAACCTTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ATACVCHCSQRY*ASKHDSAQPLP Trigger: AGGCAAAGGTTGTGCACTGTCATGTTTTGAAGCCCAGTATCGCTGAGAACAATGACAGACACATGCAGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460066.5 |
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| CDS CCA 72 bp | CAGAAGGAACAAACGCCAGACACTGTGTTTAAGAACTaGAACACCCACCGTGAGGTTCTGTGGCTTCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: QKEQTPDTVFKN*NTHREVLWLHS Trigger: AGAATGAAGCCACAGAACCTCACGGTGGGTGTTCCAGTTCTTAAACACAGTGTCTGGCGTTTGTTCCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485268.1 |
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| CDS CAA 90 bp | CCTCATAGAAGGGGACACTTAAATTTTCCCTCCACTGTATCAAAGTaGTTATTACACAAAGGGAACACTGCTCAGCCCACAGCCCGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PHRRGHLNFPSTVSK*LLHKGNTAQPTARS Trigger: GGACCGGGCTGTGGGCTGAGCAGTGTTCCCTTTGTGTAATAACAACTTTGATACAGTGGAGGGAAAATTTAAGTGTCCCCTTCTATGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000469426.5 ENST00000469656.5 ENST00000492094.6 ENST00000642964.1 |
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| CDS TCA 72 bp | CCTCCCAGGATGCTGTCCGTTTTGCTTATATGCTCCTaGATAGCTGTGATCACTTCACTGTGGACAAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PPRMLSVLLICS*IAVITSLWTSF Trigger: AAAGCTTGTCCACAGTGAAGTGATCACAGCTATTCAGGAGCATATAAGCAAAACGGACAGCATCCTGGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000469421.5 ENST00000492094.6 ENST00000642964.1 |
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| CDS GCA 72 bp | GATACTGGGCTTCAAAACATGACAGTGCACAACCTTTaGCTTCAAGGAGACTGCAACATAGAAGGGAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: DTGLQNMTVHNL*LQGDCNIEGNC Trigger: GCAGTTCCCTTCTATGTTGCAGTCTCCTTGAAGGCAAAGGTTGTGCACTGTCATGTTTTGAAGCCCAGTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460066.5 |
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| CDS GCA 72 bp | AGAAGGCCCAGGAATGAGGCTGTCTTGGGGATCCCCTaGCAAATCAAATATATCTTCATCCTTCATGGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: RRPRNEAVLGIP*QIKYIFILHGD Trigger: ATCACCATGAAGGATGAAGATATATTTGATTTGGCAGGGGATCCCCAAGACAGCCTCATTCCTGGGCCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491508.1 |
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| CDS CAA 72 bp | CGATACTGGGCTTCAAAACATGACAGTGCACAACCTTaGCCTTCAAGGAGACTGCAACATAGAAGGGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: RYWASKHDSAQP*PSRRLQHRREL Trigger: CAGTTCCCTTCTATGTTGCAGTCTCCTTGAAGGCAAAGGTTGTGCACTGTCATGTTTTGAAGCCCAGTATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460066.5 |
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| CDS CAA 90 bp | TGTTCTCAGCGATACTGGGCTTCAAAACATGACAGTGCACAACCTTaGCCTTCAAGGAGACTGCAACATAGAAGGGAACTGCTTCAAACA | + |
|
Preference number: 6 (lower is better) Translates to: CSQRYWASKHDSAQP*PSRRLQHRRELLQT Trigger: TGTTTGAAGCAGTTCCCTTCTATGTTGCAGTCTCCTTGAAGGCAAAGGTTGTGCACTGTCATGTTTTGAAGCCCAGTATCGCTGAGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460066.5 |
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| CDS GCA 72 bp | CTTTGCCTTCAAGGAGACTGCAACATAGAAGGGAACTaGTTCAAACAGAAAATCGGTGTTCCTCCAGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LCLQGDCNIEGN*FKQKIGVPPVP Trigger: AGGAACTGGAGGAACACCGATTTTCTGTTTGAAGCAGTTCCCTTCTATGTTGCAGTCTCCTTGAAGGCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460066.5 |
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| CDS CCA 72 bp | ATTTCTGCCGTATTCATTTCCTGGCATAGTGCCTTTTaGTTCTGCAGAGGCTGGCAGCCTGAATTTTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ISAVFISWHSAF*FCRGWQPEFLL Trigger: CAACAAAAATTCAGGCTGCCAGCCTCTGCAGAACCAAAAGGCACTATGCCAGGAAATGAATACGGCAGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466385.1 |
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| CDS CCA 72 bp | CGCACACTGCCTTGGGTTTATTTCCTCATCCATCAGTaGGTCAAAGTAATTTCTGCCGTATTCATTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RTLPWVYFLIHQ*VKVISAVFISW Trigger: CCAGGAAATGAATACGGCAGAAATTACTTTGACCCACTGATGGATGAGGAAATAAACCCAAGGCAGTGTGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466385.1 |
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| CDS CAA 90 bp | CCATCACAACCACGGGAAGCTCTTCTCCAATGTGAAGTGAGGAAGTaGGGTAGCAAAGCTCAACGATGTGAAGAGAAAAATGGAATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: PSQPREALLQCEVRK*GSKAQRCEEKNGIL Trigger: CAAAATTCCATTTTTCTCTTCACATCGTTGAGCTTTGCTACCCAACTTCCTCACTTCACATTGGAGAAGAGCTTCCCGTGGTTGTGATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000492094.6 ENST00000642964.1 |
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| CDS TCA 72 bp | GTCTTTAGTTCCTGGCTTCTTCAAGTTGCTTTGTCCTaGGGTCTTTGCCCTTTAAAGTTACACCTTTGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: VFSSWLLQVALS*GLCPLKLHLWR Trigger: ACGCCAAAGGTGTAACTTTAAAGGGCAAAGACCTCAGGACAAAGCAACTTGAAGAAGCCAGGAACTAAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000462111.1 ENST00000481704.1 |
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| CDS GCA 72 bp | TCTCTCTCCATGTTCTCAGCTTCTTGCCCTTGGCAATaGACAGATTTCAATCCAGTCTCTCTCATGGTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: SLSMFSASCPWQ*TDFNPVSLMVY Trigger: ATAAACCATGAGAGAGACTGGATTGAAATCTGTGCATTGCCAAGGGCAAGAAGCTGAGAACATGGAGAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481704.1 |
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| CDS GCA 72 bp | TCTCTCTCCATGTTCTCAGCTTCTTGCCCTTGGCAATaGACAGATTTCAATCCAGTCTCTCTTAAGGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SLSMFSASCPWQ*TDFNPVSLKEK Trigger: TTTCTCCTTAAGAGAGACTGGATTGAAATCTGTGCATTGCCAAGGGCAAGAAGCTGAGAACATGGAGAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491508.1 |
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| CDS CAA 72 bp | AGAACTTCCAAGCAGAATTATAGTTTTCTGAGATCTTaGGAACTCCTCAAGGTGAGCAGTGGTGGCTTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: RTSKQNYSFLRS*ELLKVSSGGFA Trigger: AGCGAAGCCACCACTGCTCACCTTGAGGAGTTCCAAAGATCTCAGAAAACTATAATTCTGCTTGGAAGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000466385.1 ENST00000469426.5 ENST00000469656.5 ENST00000472329.5 ENST00000486246.5 ENST00000492094.6 ENST00000642964.1 |
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| CDS CAA 90 bp | AATATCTCCTGGACCAAGTGCAGACACAGAAATTTCATTTTGATGTaGGAGGTCACAGCTGCAGACACTGGACTTAATGCCATGGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: NISWTKCRHRNFILM*EVTAADTGLNAMAF Trigger: AAAAGCCATGGCATTAAGTCCAGTGTCTGCAGCTGTGACCTCCAACATCAAAATGAAATTTCTGTGTCTGCACTTGGTCCAGGAGATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000492094.6 ENST00000642964.1 |
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| CDS CAA 90 bp | AGAAGTAATATCTCCTGGACCAAGTGCAGACACAGAAATTTCATTTaGATGTTGGAGGTCACAGCTGCAGACACTGGACTTAATGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: RSNISWTKCRHRNFI*MLEVTAADTGLNAM Trigger: CATGGCATTAAGTCCAGTGTCTGCAGCTGTGACCTCCAACATCAAAATGAAATTTCTGTGTCTGCACTTGGTCCAGGAGATATTACTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000492094.6 ENST00000642964.1 |
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| CDS TCA 72 bp | CTGAAGACGCTGATACCAGCACAAAATGGAGATGCTTaGAGAAGTCTCCATATCTACTATCAGCAACTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LKTLIPAQNGDA*RSLHIYYQQLK Trigger: CTTCAGTTGCTGATAGTAGATATGGAGACTTCTTCAAGCATCTCCATTTTGTGCTGGTATCAGCGTCTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000460363.6 ENST00000487015.5 ENST00000492094.6 ENST00000642964.1 |
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| CDS GCA 72 bp | AACATGACAGTGCACAACCTTTGCCTTCAAGGAGACTaGAACATAGAAGGGAACTGCTTCAAACAGAAAATC | + |
|
Preference number: 6 (lower is better) Translates to: NMTVHNLCLQGD*NIEGNCFKQKI Trigger: GATTTTCTGTTTGAAGCAGTTCCCTTCTATGTTGCAGTCTCCTTGAAGGCAAAGGTTGTGCACTGTCATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460066.5 |
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| CDS CCA 72 bp | CGCACACTGCCTTGGGTTTATTTCCTCATCCATCAGTaGGTCAAAGTAATTTCTGCCGTATTCATTTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RTLPWVYFLIHQ*VKVISAVFISF Trigger: AAAGGAAATGAATACGGCAGAAATTACTTTGACCCACTGATGGATGAGGAAATAAACCCAAGGCAGTGTGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000460066.5 ENST00000460363.6 ENST00000469426.5 ENST00000472329.5 ENST00000486246.5 ENST00000487015.5 ENST00000491508.1 ENST00000492094.6 ENST00000492169.5 ENST00000642964.1 |
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| CDS CAA 72 bp | TTTGTCCTGAGGTCTTTGCCCTTTAAAGTTACACCTTaGGCGTCTCCAAAGTACTTGATGTACATGGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: FVLRSLPFKVTP*ASPKYLMYMET Trigger: AGTCTCCATGTACATCAAGTACTTTGGAGACGCCAAAGGTGTAACTTTAAAGGGCAAAGACCTCAGGACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000462111.1 ENST00000481704.1 |
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| CDS CAA 90 bp | TTTAACCATCAGAAATTCAGCCGACTTGGATTTCTTCTGCTTAGTTaGCTTCAGAGCCTTCTGCTGAAACTTCTCTCTCTCCATGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: FNHQKFSRLGFLLLS*LQSLLLKLLSLHVL Trigger: GAGAACATGGAGAGAGAGAAGTTTCAGCAGAAGGCTCTGAAGCAAACTAAGCAGAAGAAATCCAAGTCGGCTGAATTTCTGATGGTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000460066.5 ENST00000460363.6 ENST00000466385.1 ENST00000472329.5 ENST00000491508.1 ENST00000492094.6 ENST00000642964.1 |
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| CDS CAA 90 bp | TCAAGTTGCTTTGTCCTGAGGTCTTTGCCCTTTAAAGTTACACCTTaGGCGTCTCCAAAGTACTTGATGTACATGGAGACTTACTTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSCFVLRSLPFKVTP*ASPKYLMYMETYLS Trigger: GCTTAAGTAAGTCTCCATGTACATCAAGTACTTTGGAGACGCCAAAGGTGTAACTTTAAAGGGCAAAGACCTCAGGACAAAGCAACTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481704.1 |
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| CDS TCA 72 bp | GTGTTCCTCCAGTTCCTCCAAGTAAGATATGTCCTGTaGATAATCTTCAGCTTCTCCAATTCTCCAAACAGT | + |
|
Preference number: 6 (lower is better) Translates to: VFLQFLQVRYVL*IIFSFSNSPNS Trigger: ACTGTTTGGAGAATTGGAGAAGCTGAAGATTATTCACAGGACATATCTTACTTGGAGGAACTGGAGGAACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000460066.5 ENST00000460363.6 ENST00000487015.5 ENST00000492094.6 ENST00000492169.5 ENST00000642964.1 |
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| CDS TCA 72 bp | GGTATGAAGAACTTGGTTTCTTCACTGTGGATGCGCTaGAAAGCATCTAATATCCAAGAGTCATTGTGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: GMKNLVSSLWMR*KASNIQESLCN Trigger: GTTGCACAATGACTCTTGGATATTAGATGCTTTTCAGCGCATCCACAGTGAAGAAACCAAGTTCTTCATACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000492094.6 ENST00000642964.1 |
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| CDS GCA 72 bp | AGTTCTGAAGACGCTGATACCAGCACAAAATGGAGATaGTTGAAGAAGTCTCCATATCTACTATCAGCAACT | + |
|
Preference number: 6 (lower is better) Translates to: SSEDADTSTKWR*LKKSPYLLSAT Trigger: AGTTGCTGATAGTAGATATGGAGACTTCTTCAAGCATCTCCATTTTGTGCTGGTATCAGCGTCTTCAGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000460363.6 ENST00000487015.5 ENST00000492094.6 ENST00000642964.1 |
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| CDS CCA 72 bp | TGTAGTAGAAGATGCCTCGGATTAGAAAATATACTGTaGCCATGGGCATTCTTCAGGTGCAGAAAATATTGC | + |
|
Preference number: 6 (lower is better) Translates to: CSRRCLGLENIL*PWAFFRCRKYC Trigger: GCAATATTTTCTGCACCTGAAGAATGCCCATGGCCACAGTATATTTTCTAATCCGAGGCATCTTCTACTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469421.5 |
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| CDS CAA 72 bp | TCTGAAGACGCTGATACCAGCACAAAATGGAGATGCTaGAAGAAGTCTCCATATCTACTATCAGCAACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SEDADTSTKWRC*KKSPYLLSATE Trigger: TTCAGTTGCTGATAGTAGATATGGAGACTTCTTCAAGCATCTCCATTTTGTGCTGGTATCAGCGTCTTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000460363.6 ENST00000487015.5 ENST00000492094.6 ENST00000642964.1 |
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| CDS CAA 90 bp | ATATGTCCTGTGAATAATCTTCAGCTTCTCCAATTCTCCAAACAGTaGATTTTCCTTTCACAGAATGATCCGTCAGGCTATCTCCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ICPVNNLQLLQFSKQ*IFLSQNDPSGYLPE Trigger: CTCAGGGAGATAGCCTGACGGATCATTCTGTGAAAGGAAAATCAACTGTTTGGAGAATTGGAGAAGCTGAAGATTATTCACAGGACATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000460066.5 ENST00000460363.6 ENST00000487015.5 ENST00000492094.6 ENST00000492169.5 ENST00000642964.1 |
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| CDS TCA 72 bp | GACACAGTGAACATAAGAACATTGCGAGCACTGACCTaGGAATGGGTTTTAGAATCTTTGCTCTCTATAGTA | + |
|
Preference number: 6 (lower is better) Translates to: DTVNIRTLRALT*EWVLESLLSIV Trigger: TACTATAGAGAGCAAAGATTCTAAAACCCATTCTCAGGTCAGTGCTCGCAATGTTCTTATGTTCACTGTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472329.5 |
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| CDS TCA 72 bp | AGTTCTAACACCAAATCTGAAGGTTTTTCCTACTTATaGTGTTGCCTTGTGTGTTCATGGAACTTCCCGACA | + |
|
Preference number: 6 (lower is better) Translates to: SSNTKSEGFSYL*CCLVCSWNFPT Trigger: TGTCGGGAAGTTCCATGAACACACAAGGCAACATCATAAGTAGGAAAAACCTTCAGATTTGGTGTTAGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000472329.5 |
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| CDS CCA 72 bp | TTTGAGTCATTAGTTACTTCTGTGAGGGTACCAAGCTaGGCTGCACTGTCCTTTTTACAAATATTTAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FESLVTSVRVPS*AALSFLQIFRS Trigger: AGACCTAAATATTTGTAAAAAGGACAGTGCAGCCCAGCTTGGTACCCTCACAGAAGTAACTAATGACTCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000469426.5 ENST00000469656.5 ENST00000486246.5 ENST00000487015.5 ENST00000492094.6 ENST00000642964.1 |
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| CDS CAA 90 bp | GTTCTAACACCAAATCTGAAGGTTTTTCCTACTTATGATGTTGCCTaGTGTGTTCATGGAACTTCCCGACACAGTGAACATAAGAACATT | + |
|
Preference number: 6 (lower is better) Translates to: VLTPNLKVFPTYDVA*CVHGTSRHSEHKNI Trigger: AATGTTCTTATGTTCACTGTGTCGGGAAGTTCCATGAACACACAAGGCAACATCATAAGTAGGAAAAACCTTCAGATTTGGTGTTAGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000472329.5 |
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