RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ODR4 (Homo sapiens)

Ensembl gene IDs: ENSG00000157181

Ensembl transcript IDs: ENST00000287859.11, ENST00000367470.8, ENST00000419367.8, ENST00000461662.1, ENST00000478571.1

Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAATTAGGAATGTTTCCCTCTTGCTTCTGCCAGGAGCTAGAGCACTaGAAACTGAGGACCACTGAACCTTCTTTAACTGTCCTCTCTAGG +
Preference number: 1 (lower is better)
Translates to: KLGMFPSCFCQELEH*KLRTTEPSLTVLSR
Trigger: CCTAGAGAGGACAGTTAAAGAAGGTTCAGTGGTCCTCAGTTTGCAGTGCTCTAGCTCCTGGCAGAAGCAAGAGGGAAACATTCCTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
3UTR TCA 90 bp GTTCCCTACCCCTTGATCAGAACAAAACACACAGTATACAGGAACTaGGTGCACATTAGAAAGCTCCTAGAGGATGAACTTATCCTAAAG +
Preference number: 1 (lower is better)
Translates to: VPYPLIRTKHTVYRN*VHIRKLLEDELILK
Trigger: CTTTAGGATAAGTTCATCCTCTAGGAGCTTTCTAATGTGCACTCAGTTCCTGTATACTGTGTGTTTTGTTCTGATCAAGGGGTAGGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
3UTR TCA 90 bp TCATTTCTTACTAATGGGACTTCTCTGGAAAGGTTCCCTACCCCTTaGTCAGAACAAAACACACAGTATACAGGAACTGAGTGCACATTA +
Preference number: 1 (lower is better)
Translates to: SFLTNGTSLERFPTP*SEQNTQYTGTECTL
Trigger: TAATGTGCACTCAGTTCCTGTATACTGTGTGTTTTGTTCTGATCAAGGGGTAGGGAACCTTTCCAGAGAAGTCCCATTAGTAAGAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
3UTR CCA 90 bp AACTTTCCAATGTTTTCTAGCTCCTTGTTTCTCCTCACTGCTCACTaGGTAATTTCTTTAGATCCAGCTTATAGTTTAGTTCACTTGTCT +
Preference number: 1 (lower is better)
Translates to: NFPMFSSSLFLLTAH*VISLDPAYSLVHLS
Trigger: AGACAAGTGAACTAAACTATAAGCTGGATCTAAAGAAATTACCCAGTGAGCAGTGAGGAGAAACAAGGAGCTAGAAAACATTGGAAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
3UTR-3UTR GCA 90 bp CTGGTCTCCAACTCCCTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAACAGCTTCCATCTAGATaGATAACGTTATTTCTGGAA +
Preference number: 2 (lower is better)
Translates to: LVSNSLPAPGDAPTSASQQLPSR*ITLFLE
Trigger: TTCCAGAAATAACGTTATGCATCTAGATGGAAGCTG...TTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAGGGAGTTGGAGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
3UTR-3UTR CCA 90 bp ACTGAATTTGTGCTGAGGATAACATCTGTTTTTCATCTGAGCATCTGTTTGTTTGCAGCCTCAAACTCCTaGGCTCACGTGATCTTCCTG +
Preference number: 2 (lower is better)
Translates to: TEFVLRITSVFHLSICLFAASNS*AHVIFL
Trigger: CAGGAAGATCACGTGAGCCCAGGAGTTTGAGGCTGC...AAACAAACAGATGCTCAGATGAAAAACAGATGTTATCCTCAGCACAAATTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
3UTR-3UTR CCA 90 bp ACTGAATTTGTGCTGAGGATAACATCTGTTTTTCATCTGAGCATCTGTTTGTTTTTATGTCATCCAGGCTaGTCTCCAACTCCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: TEFVLRITSVFHLSICLFLCHPG*SPTPSQ
Trigger: CTGGGAGGGAGTTGGAGACCAGCCTGGATGACATAA...AAACAAACAGATGCTCAGATGAAAAACAGATGTTATCCTCAGCACAAATTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
3UTR CAA 90 bp ATTCTTCCCTCGAACTCTCTTAACTTTCCAATGTTTTCTAGCTCCTaGTTTCTCCTCACTGCTCACTGGGTAATTTCTTTAGATCCAGCT +
Preference number: 2 (lower is better)
Translates to: ILPSNSLNFPMFSSS*FLLTAHWVISLDPA
Trigger: AGCTGGATCTAAAGAAATTACCCAGTGAGCAGTGAGGAGAAACAAGGAGCTAGAAAACATTGGAAAGTTAAGAGAGTTCGAGGGAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
3UTR-3UTR GCA 90 bp CTCAGAATTCTACCCTCTTTTGGGTACATTGTTGCTGTTAGGAAGCCTACTAAGGTTGCTATTGGTATCTaGCATCCAGACAACCATAAT +
Preference number: 2 (lower is better)
Translates to: LRILPSFGYIVAVRKPTKVAIGI*HPDNHN
Trigger: ATTATGGTTGTCTGGATGGCAGATACCAATAGCAAC...CTTAGTAGGCTTCCTAACAGCAACAATGTACCCAAAAGAGGGTAGAATTCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
3UTR-3UTR GCA 90 bp ACTGAATTTGTGCTGAGGATAACATCTGTTTTTCATCTGAGCATCTGTTTGTTTCAGGAGCTAGAGCACTaGAAACTGAGGACCACTGAA +
Preference number: 2 (lower is better)
Translates to: TEFVLRITSVFHLSICLFQELEH*KLRTTE
Trigger: TTCAGTGGTCCTCAGTTTGCAGTGCTCTAGCTCCTG...AAACAAACAGATGCTCAGATGAAAAACAGATGTTATCCTCAGCACAAATTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
3UTR-3UTR CCA 90 bp CTCAGAATTCTACCCTCTTTTGGGTACATTGTTGCTGTTAGGAAGCCTACTAAGTCTGTCAATGTTCTCTaGATGATCAAGAAACTCTTT +
Preference number: 2 (lower is better)
Translates to: LRILPSFGYIVAVRKPTKSVNVL*MIKKLF
Trigger: AAAGAGTTTCTTGATCATCCAGAGAACATTGACAGA...CTTAGTAGGCTTCCTAACAGCAACAATGTACCCAAAAGAGGGTAGAATTCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
3UTR-3UTR CCA 90 bp GATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGGCTCTGTCAATGTTCTCTaGATGATCAAGAAACTCTTT +
Preference number: 2 (lower is better)
Translates to: DFILIRNTPNRHHGSRSGSVNVL*MIKKLF
Trigger: AAAGAGTTTCTTGATCATCCAGAGAACATTGACAGA...GCCAGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
3UTR-3UTR CCA 90 bp ACTGAATTTGTGCTGAGGATAACATCTGTTTTTCATCTGAGCATCTGTTTGTTTTTTCAGATCTGCCTGTaGTTCCAACTTCATTCCTTA +
Preference number: 2 (lower is better)
Translates to: TEFVLRITSVFHLSICLFFQICL*FQLHSL
Trigger: TAAGGAATGAAGTTGGAACCACAGGCAGATCTGAAA...AAACAAACAGATGCTCAGATGAAAAACAGATGTTATCCTCAGCACAAATTCAGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
3UTR-3UTR TCA 90 bp ACTGAATTTGTGCTGAGGATAACATCTGTTTTTCATCTGAGCATCTGTTTGTTTTTGGTGATGAAACCTTaGAGAACTGAGTTCAATGTT +
Preference number: 2 (lower is better)
Translates to: TEFVLRITSVFHLSICLFLVMKP*RTEFNV
Trigger: AACATTGAACTCAGTTCTTCAAGGTTTCATCACCAA...AAACAAACAGATGCTCAGATGAAAAACAGATGTTATCCTCAGCACAAATTCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
3UTR-3UTR CCA 90 bp TGTGATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTTCTGTCAATGTTCTCTaGATGATCAAGAAACTCTTT +
Preference number: 2 (lower is better)
Translates to: CDFILIRNTPNRHHGSRSSVNVL*MIKKLF
Trigger: AAAGAGTTTCTTGATCATCCAGAGAACATTGACAGA...AGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
3UTR GCA 72 bp ATGTTTCCCTCTTGCTTCTGCCAGGAGCTAGAGCACTaGAAACTGAGGACCACTGAACCTTCTTTAACTGTC +
Preference number: 3 (lower is better)
Translates to: MFPSCFCQELEH*KLRTTEPSLTV
Trigger: GACAGTTAAAGAAGGTTCAGTGGTCCTCAGTTTGCAGTGCTCTAGCTCCTGGCAGAAGCAAGAGGGAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
3UTR GCA 72 bp CTTGGAACTAAATTAGGAATGTTTCCCTCTTGCTTCTaGCAGGAGCTAGAGCACTGCAAACTGAGGACCACT +
Preference number: 3 (lower is better)
Translates to: LGTKLGMFPSCF*QELEHCKLRTT
Trigger: AGTGGTCCTCAGTTTGCAGTGCTCTAGCTCCTGGCAGAAGCAAGAGGGAAACATTCCTAATTTAGTTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
3UTR GCA 72 bp AGGAATCTTGGAACTAAATTAGGAATGTTTCCCTCTTaGTTCTGCCAGGAGCTAGAGCACTGCAAACTGAGG +
Preference number: 3 (lower is better)
Translates to: RNLGTKLGMFPS*FCQELEHCKLR
Trigger: CCTCAGTTTGCAGTGCTCTAGCTCCTGGCAGAAGCAAGAGGGAAACATTCCTAATTTAGTTCCAAGATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
3UTR-3UTR CAA 90 bp CTCAGAATTCTACCCTCTTTTGGGTACATTGTTGCTGTTAGGAAGCCTACTAAGATGTTTTCTAGCTCCTaGTTTCTCCTCACTGCTCAC +
Preference number: 3 (lower is better)
Translates to: LRILPSFGYIVAVRKPTKMFSSS*FLLTAH
Trigger: GTGAGCAGTGAGGAGAAACAAGGAGCTAGAAAACAT...CTTAGTAGGCTTCCTAACAGCAACAATGTACCCAAAAGAGGGTAGAATTCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
3UTR-3UTR CAA 90 bp CTCAGAATTCTACCCTCTTTTGGGTACATTGTTGCTGTTAGGAAGCCTACTAAGCTGCATATGACAATGTaGCTATTGGTATCTGCCATC +
Preference number: 3 (lower is better)
Translates to: LRILPSFGYIVAVRKPTKLHMTM*LLVSAI
Trigger: GATGGCAGATACCAATAGCAACATTGTCATATGCAG...CTTAGTAGGCTTCCTAACAGCAACAATGTACCCAAAAGAGGGTAGAATTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
3UTR TCA 72 bp CTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTaGGCCATCATGCCTCTGTTAAAGTTTTTAATGTCC +
Preference number: 3 (lower is better)
Translates to: LPQPLKALGLYV*AIMPLLKFLMS
Trigger: GGACATTAAAAACTTTAACAGAGGCATGATGGCTCACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
3UTR TCA 72 bp CCCTTGATCAGAACAAAACACACAGTATACAGGAACTaGGTGCACATTAGAAAGCTCCTAGAGGATGAACTT +
Preference number: 3 (lower is better)
Translates to: PLIRTKHTVYRN*VHIRKLLEDEL
Trigger: AAGTTCATCCTCTAGGAGCTTTCTAATGTGCACTCAGTTCCTGTATACTGTGTGTTTTGTTCTGATCAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
3UTR-3UTR CAA 90 bp ACTGAATTTGTGCTGAGGATAACATCTGTTTTTCATCTGAGCATCTGTTTGTTTTCTTGTCATGTTAGTTaGTTTCAACTTGTGCCTGTG +
Preference number: 3 (lower is better)
Translates to: TEFVLRITSVFHLSICLFSCHVS*FQLVPV
Trigger: CACAGGCACAAGTTGAAACAAACTAACATGACAAGA...AAACAAACAGATGCTCAGATGAAAAACAGATGTTATCCTCAGCACAAATTCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CCA 90 bp CTGGTCTCCAACTCCCTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAGCAGCCTCAAACTCCTaGGCTCACGTGATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LVSNSLPAPGDAPTSASQAASNS*AHVIFL
Trigger: CAGGAAGATCACGTGAGCCCAGGAGTTTGAGGCTGC...TTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAGGGAGTTGGAGACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CCA 90 bp GCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGTCTCTCCGCCGGAGATaGGGGTTTCGGGCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: APGDAPTSASQSIRIIRVSLRRR*GFRAQV
Trigger: TACTTGGGCCCGAAACCCCCATCTCCGGCGGAGAGA...CACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp CTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATATCTCTCCGCCGGAGATaGGGGTTTCGGGCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: LPAPGDAPTSASQSIRIISLRRR*GFRAQV
Trigger: TACTTGGGCCCGAAACCCCCATCTCCGGCGGAGAGA...TATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp CTGGTCTCCAACTCCCTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGACTTCCTCCTCTGTaGAATTCCACAATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LVSNSLPAPGDAPTSASQRLPPL*NSTISF
Trigger: GAAAGAGATTGTGGAATTTCACAGAGGAGGAAGTCT...TTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAGGGAGTTGGAGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp CTGGTCTCCAACTCCCTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAATCGAAGTATGGTTCTTaGAAATTCTCCTACTTCCAG +
Preference number: 4 (lower is better)
Translates to: LVSNSLPAPGDAPTSASQSKYGS*KFSYFQ
Trigger: CTGGAAGTAGGAGAATTTTCAAGAACCATACTTCGA...TTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAGGGAGTTGGAGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR TCA 90 bp CTGGTCTCCAACTCCCTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAGAGGCAAACTGCATATaGCAATGTTGCTATTGGTAT +
Preference number: 4 (lower is better)
Translates to: LVSNSLPAPGDAPTSASQEANCI*QCCYWY
Trigger: ATACCAATAGCAACATTGTCATATGCAGTTTGCCTC...TTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAGGGAGTTGGAGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR GCA 90 bp CTGGTCTCCAACTCCCTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAACTTGTTTCTCCTCACTaGTCACTGGGTAATTTCTTT +
Preference number: 4 (lower is better)
Translates to: LVSNSLPAPGDAPTSASQLVSPH*SLGNFF
Trigger: AAAGAAATTACCCAGTGAGCAGTGAGGAGAAACAAG...TTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAGGGAGTTGGAGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CCA 90 bp CTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATAAGCATTCTGGATACCTaGCAGGCATGTTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LPAPGDAPTSASQSIRIISILDT*QACSVA
Trigger: GGCCACAGAACATGCCTGCCAGGTATCCAGAATGCT...TATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CCA 90 bp GCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGCCCCTGGTAGCATTCTaGATACCTGGCAGGCATGTT +
Preference number: 4 (lower is better)
Translates to: APGDAPTSASQSIRIIRVPLVAF*IPGRHV
Trigger: AACATGCCTGCCAGGTATCCAGAATGCTACCAGGGG...CACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR TCA 90 bp CTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATATGTGGATCTGTGGTCTaGATTCAGGAGCAACTGCGT +
Preference number: 4 (lower is better)
Translates to: LPAPGDAPTSASQSIRIICGSVV*IQEQLR
Trigger: ACGCAGTTGCTCCTGAATTCAGACCACAGATCCACA...TATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000419367.8
CDS-3UTR TCA 90 bp CTGGTCTCCAACTCCCTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAATTCTTGTTTCTGATTTaGGGCAAACTGCATATGACA +
Preference number: 4 (lower is better)
Translates to: LVSNSLPAPGDAPTSASQFLFLI*GKLHMT
Trigger: TGTCATATGCAGTTTGCCTCAAATCAGAAACAAGAA...TTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAGGGAGTTGGAGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR TCA 90 bp CTGGTCTCCAACTCCCTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAACATCTGTTTTTCATCTaGGCATCTGTTTGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: LVSNSLPAPGDAPTSASQHLFFI*ASVCFS
Trigger: ACTGAAACAAACAGATGCTCAGATGAAAAACAGATG...TTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAGGGAGTTGGAGACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR TCA 90 bp CTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATATGTGGATCTGTGGTCTaGATTCAGGAGCTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LPAPGDAPTSASQSIRIICGSVV*IQELSF
Trigger: GAAGGACAGCTCCTGAATTCAGACCACAGATCCACA...TATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367470.8
CDS-3UTR CCA 90 bp AGATGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTTCTCTCCGCCGGAGATaGGGGTTTCGGGCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: RCITLFLEMRATYNVKQASLRRR*GFRAQV
Trigger: TACTTGGGCCCGAAACCCCCATCTCCGGCGGAGAGA...AGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp CTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATAGGCAGGCATGTTCTGTaGCCCATTCTTCATCCAAGT +
Preference number: 4 (lower is better)
Translates to: LPAPGDAPTSASQSIRIIGRHVL*PILHPS
Trigger: ACTTGGATGAAGAATGGGCCACAGAACATGCCTGCC...TATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp CTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATAGAACCGCTACATATCTaGACTGTGGCTGTGGATCTG +
Preference number: 4 (lower is better)
Translates to: LPAPGDAPTSASQSIRIIEPLHI*TVAVDL
Trigger: CAGATCCACAGCCACAGTCCAGATATGTAGCGGTTC...TATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp CTGGTCTCCAACTCCCTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAACATCTCCATAAAATaGTCCCTGATTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LVSNSLPAPGDAPTSASQNISIK*SLISSA
Trigger: AGCTGAAGAAATCAGGGACCATTTTATGGAGATGTT...TTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAGGGAGTTGGAGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp CCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGAGCTTATGTCATCCAGGCTaGTCTCCAACTCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PGDAPTSASQSIRIIRVSLCHPG*SPTPSQ
Trigger: CTGGGAGGGAGTTGGAGACCAGCCTGGATGACATAA...GCTCACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp CTGGTCTCCAACTCCCTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAATTTAGGAGCTCTATTTaGTTCTTTTTCAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: LVSNSLPAPGDAPTSASQFRSSI*FFFRSA
Trigger: GGCAGATCTGAAAAAGAACCAAATAGAGCTCCTAAA...TTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAGGGAGTTGGAGACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CCA 90 bp CTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATATACATATCTGGACTGTaGCTGTGGATCTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LPAPGDAPTSASQSIRIIYISGL*LWICGL
Trigger: CAGACCACAGATCCACAGCCACAGTCCAGATATGTA...TATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp GCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGATCTGCTGGTCTTGCTaGACTCTTTGGATCATGGAT +
Preference number: 4 (lower is better)
Translates to: APGDAPTSASQSIRIIRVICWSC*TLWIMD
Trigger: ATCCATGATCCAAAGAGTTCAGCAAGACCAGCAGAT...CACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp CTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATAATCTGCTGGTCTTGCTaGACTCTTTGGATCATGGAT +
Preference number: 4 (lower is better)
Translates to: LPAPGDAPTSASQSIRIIICWSC*TLWIMD
Trigger: ATCCATGATCCAAAGAGTTCAGCAAGACCAGCAGAT...TATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR GCA 90 bp CTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATAGAATTCAGGAGCAACTaGGTTAGCACTCTGACATCA +
Preference number: 4 (lower is better)
Translates to: LPAPGDAPTSASQSIRIIEFRSN*VSTLTS
Trigger: TGATGTCAGAGTGCTAACGCAGTTGCTCCTGAATTC...TATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000419367.8
CDS-3UTR GCA 90 bp CCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGAGCACCCGCAGCAAGGACTaGAACTGTAAATGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: PGDAPTSASQSIRIIRVSTRSKD*NCKCCN
Trigger: ATTGCAGCATTTACAGTTGCAGTCCTTGCTGCGGGT...GCTCACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp CTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACACACAACATTACAGTaGATCCAGGAAGGGGAACAA +
Preference number: 4 (lower is better)
Translates to: LPAPGDAPTSASQSIRIIHTTLQ*IQEGEQ
Trigger: TTGTTCCCCTTCCTGGATCCACTGTAATGTTGTGTG...TATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp CTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACTACGCAGGGCATTTTaGAAATCATTTGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: LPAPGDAPTSASQSIRIILRRAF*KSFASS
Trigger: AGAACTGGCAAATGATTTTCAAAATGCCCTGCGTAG...TATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR TCA 90 bp GCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGAGACTTCCTCCTCTGTaGAATTCCACAATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: APGDAPTSASQSIRIIRVRLPPL*NSTISF
Trigger: GAAAGAGATTGTGGAATTTCACAGAGGAGGAAGTCT...CACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR GCA 90 bp ACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAACAAGGCCAGGAGCTAGAGCACTaGAAACTGAGGACCACTGAA +
Preference number: 4 (lower is better)
Translates to: TLFLEMRATYNVKQAKQGQELEH*KLRTTE
Trigger: TTCAGTGGTCCTCAGTTTGCAGTGCTCTAGCTCCTG...GCCTTGTTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CCA 90 bp ACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAACAAGGCGAACCGCTACATATCTaGACTGTGGCTGTGGATCTG +
Preference number: 4 (lower is better)
Translates to: TLFLEMRATYNVKQAKQGEPLHI*TVAVDL
Trigger: CAGATCCACAGCCACAGTCCAGATATGTAGCGGTTC...GCCTTGTTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp ACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAACAAGGCGTGGCTGTGGATCTGTaGTCTGAATTCAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: TLFLEMRATYNVKQAKQGVAVDL*SEFRSC
Trigger: ACAGCTCCTGAATTCAGACCACAGATCCACAGCCAC...GCCTTGTTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367470.8
CDS-3UTR TCA 90 bp CCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGAGCAGACTTCCTCCTCTGTaGAATTCCACAATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: PGDAPTSASQSIRIIRVSRLPPL*NSTISF
Trigger: GAAAGAGATTGTGGAATTTCACAGAGGAGGAAGTCT...GCTCACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp TGTTACATGCAGCTTCCATCTAGATGCATAACGTTATTTCTGGAAATGCGGGCCTGTGGATCTGTGGTCTaGATTCAGGAGCAACTGCGT +
Preference number: 4 (lower is better)
Translates to: CYMQLPSRCITLFLEMRACGSVV*IQEQLR
Trigger: ACGCAGTTGCTCCTGAATTCAGACCACAGATCCACA...GGCCCGCATTTCCAGAAATAACGTTATGCATCTAGATGGAAGCTGCATGTAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000419367.8
CDS-3UTR TCA 90 bp CTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATAGAGGCAAACTGCATATaGCAATGTTGCTATTGGTAT +
Preference number: 4 (lower is better)
Translates to: LPAPGDAPTSASQSIRIIEANCI*QCCYWY
Trigger: ATACCAATAGCAACATTGTCATATGCAGTTTGCCTC...TATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR GCA 90 bp CCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGAGCCCTGTTTTCAGAATGTaGACTCGTGGCAGACAATTA +
Preference number: 4 (lower is better)
Translates to: PGDAPTSASQSIRIIRVSPVFRM*TRGRQL
Trigger: TAATTGTCTGCCACGAGTGCACATTCTGAAAACAGG...GCTCACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR GCA 90 bp GCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGGACTGCAACTGTAAATaGTGCAATCACACCTATGTT +
Preference number: 4 (lower is better)
Translates to: APGDAPTSASQSIRIIRVDCNCK*CNHTYV
Trigger: AACATAGGTGTGATTGCAGCATTTACAGTTGCAGTC...CACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR GCA 90 bp CTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATAGACTGCAACTGTAAATaGTGCAATCACACCTATGTT +
Preference number: 4 (lower is better)
Translates to: LPAPGDAPTSASQSIRIIDCNCK*CNHTYV
Trigger: AACATAGGTGTGATTGCAGCATTTACAGTTGCAGTC...TATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR GCA 90 bp TACATGCAGCTTCCATCTAGATGCATAACGTTATTTCTGGAAATGCGGGCCACCACCCGCAGCAAGGACTaGAACTGTAAATGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: YMQLPSRCITLFLEMRATTRSKD*NCKCCN
Trigger: ATTGCAGCATTTACAGTTGCAGTCCTTGCTGCGGGT...GGTGGCCCGCATTTCCAGAAATAACGTTATGCATCTAGATGGAAGCTGCATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR GCA 90 bp CTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATATCAAGAAACTCTTTGTaGCTCACCCTAATCACTGAA +
Preference number: 4 (lower is better)
Translates to: LPAPGDAPTSASQSIRIISRNSL*LTLITE
Trigger: TTCAGTGATTAGGGTGAGGCACAAAGAGTTTCTTGA...TATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR GCA 90 bp GCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGTCAAGAAACTCTTTGTaGCTCACCCTAATCACTGAA +
Preference number: 4 (lower is better)
Translates to: APGDAPTSASQSIRIIRVSRNSL*LTLITE
Trigger: TTCAGTGATTAGGGTGAGGCACAAAGAGTTTCTTGA...CACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp AGATGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTCAGAATGTGCACTCGTaGCAGACAATTACCTCGGAC +
Preference number: 4 (lower is better)
Translates to: RCITLFLEMRATYNVKQAQNVHS*QTITSD
Trigger: GTCCGAGGTAATTGTCTGCCACGAGTGCACATTCTG...AGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp ACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAACAAGGCTTGCTCCTCTTTGGGTaGCGTTCTAGTGGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: TLFLEMRATYNVKQAKQGLLLFG*RSSGKN
Trigger: ATTCTTGCCACTAGAACGCCACCCAAAGAGGAGCAA...GCCTTGTTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp TGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAAAGCATTCTGGATACCTaGCAGGCATGTTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: CITLFLEMRATYNVKQAKSILDT*QACSVA
Trigger: GGCCACAGAACATGCCTGCCAGGTATCCAGAATGCT...TTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CCA 90 bp TGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAACCCCTGGTAGCATTCTaGATACCTGGCAGGCATGTT +
Preference number: 4 (lower is better)
Translates to: CITLFLEMRATYNVKQAKPLVAF*IPGRHV
Trigger: AACATGCCTGCCAGGTATCCAGAATGCTACCAGGGG...TTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CCA 90 bp TGTTACATGCAGCTTCCATCTAGATGCATAACGTTATTTCTGGAAATGCGGGCCGTGGCTGTGGATCTGTaGTCTGAATTCAGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: CYMQLPSRCITLFLEMRAVAVDL*SEFRSN
Trigger: GTTGCTCCTGAATTCAGACCACAGATCCACAGCCAC...GGCCCGCATTTCCAGAAATAACGTTATGCATCTAGATGGAAGCTGCATGTAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000419367.8
CDS-3UTR CCA 90 bp TACATGCAGCTTCCATCTAGATGCATAACGTTATTTCTGGAAATGCGGGCCACCTCTGGACTGTGGCTGTaGATCTGTGGTCTGAATTCA +
Preference number: 4 (lower is better)
Translates to: YMQLPSRCITLFLEMRATSGLWL*ICGLNS
Trigger: TGAATTCAGACCACAGATCCACAGCCACAGTCCAGA...GGTGGCCCGCATTTCCAGAAATAACGTTATGCATCTAGATGGAAGCTGCATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp ACACACCAAATAGGCATCATGGCAGCAGATCTGGCTGCTAGTGTTTTAAATACATTATGTCATCCAGGCTaGTCTCCAACTCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: THQIGIMAADLAASVLNTLCHPG*SPTPSQ
Trigger: CTGGGAGGGAGTTGGAGACCAGCCTGGATGACATAA...TGTATTTAAAACACTAGCAGCCAGATCTGCTGCCATGATGCCTATTTGGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp TGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAATTATGTCATCCAGGCTaGTCTCCAACTCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: CITLFLEMRATYNVKQAKLCHPG*SPTPSQ
Trigger: CTGGGAGGGAGTTGGAGACCAGCCTGGATGACATAA...TTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp GATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGGCGCAGCCTCAAACTCCTaGGCTCACGTGATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: DFILIRNTPNRHHGSRSGAASNS*AHVIFL
Trigger: CAGGAAGATCACGTGAGCCCAGGAGTTTGAGGCTGC...GCCAGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CCA 90 bp CTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATATTTCAGATCTGCCTGTaGTTCCAACTTCATTCCTTA +
Preference number: 4 (lower is better)
Translates to: LPAPGDAPTSASQSIRIIFQICL*FQLHSL
Trigger: TAAGGAATGAAGTTGGAACCACAGGCAGATCTGAAA...TATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR TCA 90 bp GCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGTTGTCCAATGAAGCTTaGCTATTCATAGAAGAACTC +
Preference number: 4 (lower is better)
Translates to: APGDAPTSASQSIRIIRVLSNEA*LFIEEL
Trigger: GAGTTCTTCTATGAATAGTCAAGCTTCATTGGACAA...CACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp ACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAACAAGGCCTGTCTTGCTTTCACTaGTCTTTTTCTCCCCATGGT +
Preference number: 4 (lower is better)
Translates to: TLFLEMRATYNVKQAKQGLSCFH*SFSPHG
Trigger: ACCATGGGGAGAAAAAGATCAGTGAAAGCAAGACAG...GCCTTGTTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR GCA 90 bp CCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGAGCGACTGCAACTGTAAATaGTGCAATCACACCTATGTT +
Preference number: 4 (lower is better)
Translates to: PGDAPTSASQSIRIIRVSDCNCK*CNHTYV
Trigger: AACATAGGTGTGATTGCAGCATTTACAGTTGCAGTC...GCTCACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR GCA 90 bp GCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGCAGCTTCCATCTAGATaGATAACGTTATTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: APGDAPTSASQSIRIIRVQLPSR*ITLFLE
Trigger: TTCCAGAAATAACGTTATGCATCTAGATGGAAGCTG...CACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp CTCAGAATTCTACCCTCTTTTGGGTACATTGTTGCTGTTAGGAAGCCTACTAAGCAGAATGTGCACTCGTaGCAGACAATTACCTCGGAC +
Preference number: 4 (lower is better)
Translates to: LRILPSFGYIVAVRKPTKQNVHS*QTITSD
Trigger: GTCCGAGGTAATTGTCTGCCACGAGTGCACATTCTG...CTTAGTAGGCTTCCTAACAGCAACAATGTACCCAAAAGAGGGTAGAATTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CCA 90 bp CTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATAATGTTTGAAAGATACTaGCCAACAGTCTCTTCTACA +
Preference number: 4 (lower is better)
Translates to: LPAPGDAPTSASQSIRIIMFERY*PTVSST
Trigger: TGTAGAAGAGACTGTTGGCCAGTATCTTTCAAACAT...TATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp CTCAGAATTCTACCCTCTTTTGGGTACATTGTTGCTGTTAGGAAGCCTACTAAGGGCAGGCATGTTCTGTaGCCCATTCTTCATCCAAGT +
Preference number: 4 (lower is better)
Translates to: LRILPSFGYIVAVRKPTKGRHVL*PILHPS
Trigger: ACTTGGATGAAGAATGGGCCACAGAACATGCCTGCC...CTTAGTAGGCTTCCTAACAGCAACAATGTACCCAAAAGAGGGTAGAATTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CCA 90 bp AGATGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTTCTGGACTGTGGCTGTaGATCTGTGGTCTGAATTCA +
Preference number: 4 (lower is better)
Translates to: RCITLFLEMRATYNVKQASGLWL*ICGLNS
Trigger: TGAATTCAGACCACAGATCCACAGCCACAGTCCAGA...AGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp TGTTACATGCAGCTTCCATCTAGATGCATAACGTTATTTCTGGAAATGCGGGCCTACATATCTGGACTGTaGCTGTGGATCTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: CYMQLPSRCITLFLEMRAYISGL*LWICGL
Trigger: CAGACCACAGATCCACAGCCACAGTCCAGATATGTA...GGCCCGCATTTCCAGAAATAACGTTATGCATCTAGATGGAAGCTGCATGTAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp TGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAAACAGCAAACATTAGCTaGCAGGCATGTTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: CITLFLEMRATYNVKQAKTANIS*QACSVA
Trigger: GGCCACAGAACATGCCTGCCAGCTAATGTTTGCTGT...TTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419367.8
CDS-3UTR TCA 90 bp TACATGCAGCTTCCATCTAGATGCATAACGTTATTTCTGGAAATGCGGGCCACCCTACGCAGGGCATTTTaGAAATCATTTGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: YMQLPSRCITLFLEMRATLRRAF*KSFASS
Trigger: AGAACTGGCAAATGATTTTCAAAATGCCCTGCGTAG...GGTGGCCCGCATTTCCAGAAATAACGTTATGCATCTAGATGGAAGCTGCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR TCA 90 bp TACATGCAGCTTCCATCTAGATGCATAACGTTATTTCTGGAAATGCGGGCCACCCCTCACCCTAATCACTaGAGTAATGAAAGGAGATAC +
Preference number: 4 (lower is better)
Translates to: YMQLPSRCITLFLEMRATPHPNH*SNERRY
Trigger: GTATCTCCTTTCATTACTTCAGTGATTAGGGTGAGG...GGTGGCCCGCATTTCCAGAAATAACGTTATGCATCTAGATGGAAGCTGCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp ACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAACAAGGCACAGTATACAGGAACTaGGTGCACATTAGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: TLFLEMRATYNVKQAKQGTVYRN*VHIRKL
Trigger: GAGCTTTCTAATGTGCACTCAGTTCCTGTATACTGT...GCCTTGTTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR GCA 90 bp CCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGAGCTGCAACTGTAAATGCTaGAATCACACCTATGTTTTG +
Preference number: 4 (lower is better)
Translates to: PGDAPTSASQSIRIIRVSCNCKC*NHTYVL
Trigger: CAAAACATAGGTGTGATTGCAGCATTTACAGTTGCA...GCTCACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR GCA 90 bp TGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAAACCCGCAGCAAGGACTaGAACTGTAAATGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: CITLFLEMRATYNVKQAKTRSKD*NCKCCN
Trigger: ATTGCAGCATTTACAGTTGCAGTCCTTGCTGCGGGT...TTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR GCA 90 bp GATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGGCCAGGAGCTAGAGCACTaGAAACTGAGGACCACTGAA +
Preference number: 4 (lower is better)
Translates to: DFILIRNTPNRHHGSRSGQELEH*KLRTTE
Trigger: TTCAGTGGTCCTCAGTTTGCAGTGCTCTAGCTCCTG...GCCAGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CCA 90 bp CTCAGAATTCTACCCTCTTTTGGGTACATTGTTGCTGTTAGGAAGCCTACTAAGTTGCTCCTCTTTGGGTaGCGTTCTAGTGGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: LRILPSFGYIVAVRKPTKLLLFG*RSSGKN
Trigger: ATTCTTGCCACTAGAACGCCACCCAAAGAGGAGCAA...CTTAGTAGGCTTCCTAACAGCAACAATGTACCCAAAAGAGGGTAGAATTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CCA 90 bp GATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGGCGGCAGGCATGTTCTGTaGCCCATTCTTCATCCAAGT +
Preference number: 4 (lower is better)
Translates to: DFILIRNTPNRHHGSRSGGRHVL*PILHPS
Trigger: ACTTGGATGAAGAATGGGCCACAGAACATGCCTGCC...GCCAGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp TGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAATCTGGACTGTGGCTGTaGATCTGTGGTCTGAATTCA +
Preference number: 4 (lower is better)
Translates to: CITLFLEMRATYNVKQAKSGLWL*ICGLNS
Trigger: TGAATTCAGACCACAGATCCACAGCCACAGTCCAGA...TTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp GATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGGCGAACCGCTACATATCTaGACTGTGGCTGTGGATCTG +
Preference number: 4 (lower is better)
Translates to: DFILIRNTPNRHHGSRSGEPLHI*TVAVDL
Trigger: CAGATCCACAGCCACAGTCCAGATATGTAGCGGTTC...GCCAGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp AGATGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTCACACAACATTACAGTaGATCCAGGAAGGGGAACAA +
Preference number: 4 (lower is better)
Translates to: RCITLFLEMRATYNVKQAHTTLQ*IQEGEQ
Trigger: TTGTTCCCCTTCCTGGATCCACTGTAATGTTGTGTG...AGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp ACACACCAAATAGGCATCATGGCAGCAGATCTGGCTGCTAGTGTTTTAAATACACTAATGGGACTTCTCTaGAAAGGTTCCCTACCCCTT +
Preference number: 4 (lower is better)
Translates to: THQIGIMAADLAASVLNTLMGLL*KGSLPL
Trigger: AAGGGGTAGGGAACCTTTCCAGAGAAGTCCCATTAG...TGTATTTAAAACACTAGCAGCCAGATCTGCTGCCATGATGCCTATTTGGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR TCA 90 bp TGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAAGTAGAAGCACAAATGTaGAGTGTCACTCGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: CITLFLEMRATYNVKQAKVEAQM*SVTRSE
Trigger: CTCAGAACGAGTGACACTTCACATTTGTGCTTCTAC...TTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp ACACACCAAATAGGCATCATGGCAGCAGATCTGGCTGCTAGTGTTTTAAATACAGTAGAAGCACAAATGTaGAGTGTCACTCGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: THQIGIMAADLAASVLNTVEAQM*SVTRSE
Trigger: CTCAGAACGAGTGACACTTCACATTTGTGCTTCTAC...TGTATTTAAAACACTAGCAGCCAGATCTGCTGCCATGATGCCTATTTGGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp ACACACCAAATAGGCATCATGGCAGCAGATCTGGCTGCTAGTGTTTTAAATACAATCTGCTGGTCTTGCTaGACTCTTTGGATCATGGAT +
Preference number: 4 (lower is better)
Translates to: THQIGIMAADLAASVLNTICWSC*TLWIMD
Trigger: ATCCATGATCCAAAGAGTTCAGCAAGACCAGCAGAT...TGTATTTAAAACACTAGCAGCCAGATCTGCTGCCATGATGCCTATTTGGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp CTCAGAATTCTACCCTCTTTTGGGTACATTGTTGCTGTTAGGAAGCCTACTAAGCTGTCTTGCTTTCACTaGTCTTTTTCTCCCCATGGT +
Preference number: 4 (lower is better)
Translates to: LRILPSFGYIVAVRKPTKLSCFH*SFSPHG
Trigger: ACCATGGGGAGAAAAAGATCAGTGAAAGCAAGACAG...CTTAGTAGGCTTCCTAACAGCAACAATGTACCCAAAAGAGGGTAGAATTCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR GCA 90 bp TGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAAGAATTCAGGAGCAACTaGGTTAGCACTCTGACATCA +
Preference number: 4 (lower is better)
Translates to: CITLFLEMRATYNVKQAKEFRSN*VSTLTS
Trigger: TGATGTCAGAGTGCTAACGCAGTTGCTCCTGAATTC...TTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000419367.8
CDS-3UTR GCA 90 bp ACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAACAAGGCTCAAGAAACTCTTTGTaGCTCACCCTAATCACTGAA +
Preference number: 4 (lower is better)
Translates to: TLFLEMRATYNVKQAKQGSRNSL*LTLITE
Trigger: TTCAGTGATTAGGGTGAGGCACAAAGAGTTTCTTGA...GCCTTGTTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR GCA 90 bp TACATGCAGCTTCCATCTAGATGCATAACGTTATTTCTGGAAATGCGGGCCACCGTTGCTATTGGTATCTaGCATCCAGACAACCATAAT +
Preference number: 4 (lower is better)
Translates to: YMQLPSRCITLFLEMRATVAIGI*HPDNHN
Trigger: ATTATGGTTGTCTGGATGGCAGATACCAATAGCAAC...GGTGGCCCGCATTTCCAGAAATAACGTTATGCATCTAGATGGAAGCTGCATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR GCA 90 bp TGTGATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTTTTCCCTCTTGCTTCTaGCAGGAGCTAGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: CDFILIRNTPNRHHGSRSFPSCF*QELEHC
Trigger: GCAGTGCTCTAGCTCCTGGCAGAAGCAAGAGGGAAA...AGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CCA 90 bp CCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGAGCTCTGTCAATGTTCTCTaGATGATCAAGAAACTCTTT +
Preference number: 4 (lower is better)
Translates to: PGDAPTSASQSIRIIRVSSVNVL*MIKKLF
Trigger: AAAGAGTTTCTTGATCATCCAGAGAACATTGACAGA...GCTCACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp TACATGCAGCTTCCATCTAGATGCATAACGTTATTTCTGGAAATGCGGGCCACCCCTGATTTCTTCAGCTaGCTCATCGTCAAATTTATA +
Preference number: 4 (lower is better)
Translates to: YMQLPSRCITLFLEMRATPDFFS*LIVKFI
Trigger: TATAAATTTGACGATGAGTCAGCTGAAGAAATCAGG...GGTGGCCCGCATTTCCAGAAATAACGTTATGCATCTAGATGGAAGCTGCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp CTCAGAATTCTACCCTCTTTTGGGTACATTGTTGCTGTTAGGAAGCCTACTAAGACAGTATACAGGAACTaGGTGCACATTAGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LRILPSFGYIVAVRKPTKTVYRN*VHIRKL
Trigger: GAGCTTTCTAATGTGCACTCAGTTCCTGTATACTGT...CTTAGTAGGCTTCCTAACAGCAACAATGTACCCAAAAGAGGGTAGAATTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR TCA 90 bp ACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAACAAGGCATGTCTTCTTGTTTCTaGTTTGAGGCAAACTGCATA +
Preference number: 4 (lower is better)
Translates to: TLFLEMRATYNVKQAKQGMSSCF*FEANCI
Trigger: TATGCAGTTTGCCTCAAATCAGAAACAAGAAGACAT...GCCTTGTTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR GCA 90 bp ACTGAATTTGTGCTGAGGATAACATCTGTTTTTCATCTGAGCATCTGTTTGTTTTTTCCCTCTTGCTTCTaGCAGGAGCTAGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: TEFVLRITSVFHLSICLFFPSCF*QELEHC
Trigger: GCAGTGCTCTAGCTCCTGGCAGAAGCAAGAGGGAAA...AAACAAACAGATGCTCAGATGAAAAACAGATGTTATCCTCAGCACAAATTCAGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR GCA 90 bp TGTGATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGGAATGTTTCCCTCTTaGTTCTGCCAGGAGCTAGAG +
Preference number: 4 (lower is better)
Translates to: CDFILIRNTPNRHHGSRSGMFPS*FCQELE
Trigger: CTCTAGCTCCTGGCAGAAGCAAGAGGGAAACATTCC...AGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CCA 90 bp TGTGATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGTGGCTGTGGATCTGTaGTCTGAATTCAGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: CDFILIRNTPNRHHGSRSVAVDL*SEFRSN
Trigger: GTTGCTCCTGAATTCAGACCACAGATCCACAGCCAC...AGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000419367.8
3UTR CAA 72 bp GGGTACATTGTTGCTGTTAGGAAGCCTACTAAGTATTaGACTGTCTTGCTTTCACTGATCTTTTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GYIVAVRKPTKY*TVLLSLIFFSP
Trigger: TGGGGAGAAAAAGATCAGTGAAAGCAAGACAGTCAAATACTTAGTAGGCTTCCTAACAGCAACAATGTACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR TCA 90 bp ACACACCAAATAGGCATCATGGCAGCAGATCTGGCTGCTAGTGTTTTAAATACAGATGATAATCCACTTTaGTACTTCCAATCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: THQIGIMAADLAASVLNTDDNPL*YFQSAG
Trigger: ACCAGCAGATTGGAAGTATCAAAGTGGATTATCATC...TGTATTTAAAACACTAGCAGCCAGATCTGCTGCCATGATGCCTATTTGGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp TGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAAGATGATAATCCACTTTaGTACTTCCAATCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: CITLFLEMRATYNVKQAKDDNPL*YFQSAG
Trigger: ACCAGCAGATTGGAAGTATCAAAGTGGATTATCATC...TTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp TGTTACATGCAGCTTCCATCTAGATGCATAACGTTATTTCTGGAAATGCGGGCCAAAGCTCCTAGAGGATaGACTTATCCTAAAGTTGTT +
Preference number: 4 (lower is better)
Translates to: CYMQLPSRCITLFLEMRAKAPRG*TYPKVV
Trigger: AACAACTTTAGGATAAGTTCATCCTCTAGGAGCTTT...GGCCCGCATTTCCAGAAATAACGTTATGCATCTAGATGGAAGCTGCATGTAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR TCA 90 bp ACACACCAAATAGGCATCATGGCAGCAGATCTGGCTGCTAGTGTTTTAAATACATCGAAGTATGGTTCTTaGAAATTCTCCTACTTCCAG +
Preference number: 4 (lower is better)
Translates to: THQIGIMAADLAASVLNTSKYGS*KFSYFQ
Trigger: CTGGAAGTAGGAGAATTTTCAAGAACCATACTTCGA...TGTATTTAAAACACTAGCAGCCAGATCTGCTGCCATGATGCCTATTTGGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR TCA 90 bp AGATGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTTTCTTGTTTCTGATTTaGGGCAAACTGCATATGACA +
Preference number: 4 (lower is better)
Translates to: RCITLFLEMRATYNVKQAFLFLI*GKLHMT
Trigger: TGTCATATGCAGTTTGCCTCAAATCAGAAACAAGAA...AGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR TCA 90 bp TGTTACATGCAGCTTCCATCTAGATGCATAACGTTATTTCTGGAAATGCGGGCCTTCAACTTGTGCCTGTaGTCTCTAGTCATAAAATAC +
Preference number: 4 (lower is better)
Translates to: CYMQLPSRCITLFLEMRAFNLCL*SLVIKY
Trigger: GTATTTTATGACTAGAGATCACAGGCACAAGTTGAA...GGCCCGCATTTCCAGAAATAACGTTATGCATCTAGATGGAAGCTGCATGTAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR TCA 90 bp TGTTACATGCAGCTTCCATCTAGATGCATAACGTTATTTCTGGAAATGCGGGCCTTGGTGATGAAACCTTaGAGAACTGAGTTCAATGTT +
Preference number: 4 (lower is better)
Translates to: CYMQLPSRCITLFLEMRALVMKP*RTEFNV
Trigger: AACATTGAACTCAGTTCTTCAAGGTTTCATCACCAA...GGCCCGCATTTCCAGAAATAACGTTATGCATCTAGATGGAAGCTGCATGTAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR GCA 90 bp AGATGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTTGCAACTGTAAATGCTaGAATCACACCTATGTTTTG +
Preference number: 4 (lower is better)
Translates to: RCITLFLEMRATYNVKQACNCKC*NHTYVL
Trigger: CAAAACATAGGTGTGATTGCAGCATTTACAGTTGCA...AGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR GCA 90 bp AGATGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTCAGCTTCCATCTAGATaGATAACGTTATTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RCITLFLEMRATYNVKQAQLPSR*ITLFLE
Trigger: TTCCAGAAATAACGTTATGCATCTAGATGGAAGCTG...AGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR GCA 90 bp TGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAACTTGTTTCTCCTCACTaGTCACTGGGTAATTTCTTT +
Preference number: 4 (lower is better)
Translates to: CITLFLEMRATYNVKQAKLVSPH*SLGNFF
Trigger: AAAGAAATTACCCAGTGAGCAGTGAGGAGAAACAAG...TTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CCA 90 bp ACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAACAAGGCTCTGTCAATGTTCTCTaGATGATCAAGAAACTCTTT +
Preference number: 4 (lower is better)
Translates to: TLFLEMRATYNVKQAKQGSVNVL*MIKKLF
Trigger: AAAGAGTTTCTTGATCATCCAGAGAACATTGACAGA...GCCTTGTTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp GATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGGCGATGATAATCCACTTTaGTACTTCCAATCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: DFILIRNTPNRHHGSRSGDDNPL*YFQSAG
Trigger: ACCAGCAGATTGGAAGTATCAAAGTGGATTATCATC...GCCAGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp CTCAGAATTCTACCCTCTTTTGGGTACATTGTTGCTGTTAGGAAGCCTACTAAGCCTGATTTCTTCAGCTaGCTCATCGTCAAATTTATA +
Preference number: 4 (lower is better)
Translates to: LRILPSFGYIVAVRKPTKPDFFS*LIVKFI
Trigger: TATAAATTTGACGATGAGTCAGCTGAAGAAATCAGG...CTTAGTAGGCTTCCTAACAGCAACAATGTACCCAAAAGAGGGTAGAATTCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR TCA 90 bp ACACACCAAATAGGCATCATGGCAGCAGATCTGGCTGCTAGTGTTTTAAATACACCTGATTTCTTCAGCTaGCTCATCGTCAAATTTATA +
Preference number: 4 (lower is better)
Translates to: THQIGIMAADLAASVLNTPDFFS*LIVKFI
Trigger: TATAAATTTGACGATGAGTCAGCTGAAGAAATCAGG...TGTATTTAAAACACTAGCAGCCAGATCTGCTGCCATGATGCCTATTTGGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp ACACACCAAATAGGCATCATGGCAGCAGATCTGGCTGCTAGTGTTTTAAATACATTGGTGATGAAACCTTaGAGAACTGAGTTCAATGTT +
Preference number: 4 (lower is better)
Translates to: THQIGIMAADLAASVLNTLVMKP*RTEFNV
Trigger: AACATTGAACTCAGTTCTTCAAGGTTTCATCACCAA...TGTATTTAAAACACTAGCAGCCAGATCTGCTGCCATGATGCCTATTTGGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR GCA 90 bp GATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGGCTATATCCCTCTTTACTaGCTGCACAGCATCTTTAAC +
Preference number: 4 (lower is better)
Translates to: DFILIRNTPNRHHGSRSGYIPLY*LHSIFN
Trigger: GTTAAAGATGCTGTGCAGGCAGTAAAGAGGGATATA...GCCAGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp ACACACCAAATAGGCATCATGGCAGCAGATCTGGCTGCTAGTGTTTTAAATACAATGTTTGAAAGATACTaGCCAACAGTCTCTTCTACA +
Preference number: 4 (lower is better)
Translates to: THQIGIMAADLAASVLNTMFERY*PTVSST
Trigger: TGTAGAAGAGACTGTTGGCCAGTATCTTTCAAACAT...TGTATTTAAAACACTAGCAGCCAGATCTGCTGCCATGATGCCTATTTGGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp ACTGAATTTGTGCTGAGGATAACATCTGTTTTTCATCTGAGCATCTGTTTGTTTTTGCTCCTCTTTGGGTaGCGTTCTAGTGGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: TEFVLRITSVFHLSICLFLLLFG*RSSGKN
Trigger: ATTCTTGCCACTAGAACGCCACCCAAAGAGGAGCAA...AAACAAACAGATGCTCAGATGAAAAACAGATGTTATCCTCAGCACAAATTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CCA 90 bp ACACACCAAATAGGCATCATGGCAGCAGATCTGGCTGCTAGTGTTTTAAATACAAACATCTCCATAAAATaGTCCCTGATTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: THQIGIMAADLAASVLNTNISIK*SLISSA
Trigger: AGCTGAAGAAATCAGGGACCATTTTATGGAGATGTT...TGTATTTAAAACACTAGCAGCCAGATCTGCTGCCATGATGCCTATTTGGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp TGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAAAACATCTCCATAAAATaGTCCCTGATTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: CITLFLEMRATYNVKQAKNISIK*SLISSA
Trigger: AGCTGAAGAAATCAGGGACCATTTTATGGAGATGTT...TTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp ACTGAATTTGTGCTGAGGATAACATCTGTTTTTCATCTGAGCATCTGTTTGTTTCTAATGGGACTTCTCTaGAAAGGTTCCCTACCCCTT +
Preference number: 4 (lower is better)
Translates to: TEFVLRITSVFHLSICLFLMGLL*KGSLPL
Trigger: AAGGGGTAGGGAACCTTTCCAGAGAAGTCCCATTAG...AAACAAACAGATGCTCAGATGAAAAACAGATGTTATCCTCAGCACAAATTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CCA 90 bp GATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGGCTTTCAGATCTGCCTGTaGTTCCAACTTCATTCCTTA +
Preference number: 4 (lower is better)
Translates to: DFILIRNTPNRHHGSRSGFQICL*FQLHSL
Trigger: TAAGGAATGAAGTTGGAACCACAGGCAGATCTGAAA...GCCAGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CCA 90 bp TGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAATTTAGGAGCTCTATTTaGTTCTTTTTCAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: CITLFLEMRATYNVKQAKFRSSI*FFFRSA
Trigger: GGCAGATCTGAAAAAGAACCAAATAGAGCTCCTAAA...TTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR TCA 90 bp ACTGAATTTGTGCTGAGGATAACATCTGTTTTTCATCTGAGCATCTGTTTGTTTGTAGAAGCACAAATGTaGAGTGTCACTCGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: TEFVLRITSVFHLSICLFVEAQM*SVTRSE
Trigger: CTCAGAACGAGTGACACTTCACATTTGTGCTTCTAC...AAACAAACAGATGCTCAGATGAAAAACAGATGTTATCCTCAGCACAAATTCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR TCA 90 bp GATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGGCTTGTCCAATGAAGCTTaGCTATTCATAGAAGAACTC +
Preference number: 4 (lower is better)
Translates to: DFILIRNTPNRHHGSRSGLSNEA*LFIEEL
Trigger: GAGTTCTTCTATGAATAGTCAAGCTTCATTGGACAA...GCCAGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp TGTGATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTCCTCACCCTAATCACTaGAGTAATGAAAGGAGATAC +
Preference number: 4 (lower is better)
Translates to: CDFILIRNTPNRHHGSRSPHPNH*SNERRY
Trigger: GTATCTCCTTTCATTACTTCAGTGATTAGGGTGAGG...AGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp GATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGGCCATCTGTTTTTCATCTaGGCATCTGTTTGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: DFILIRNTPNRHHGSRSGHLFFI*ASVCFS
Trigger: ACTGAAACAAACAGATGCTCAGATGAAAAACAGATG...GCCAGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR GCA 90 bp TGTGATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTCCTGTTTTCAGAATGTaGACTCGTGGCAGACAATTA +
Preference number: 4 (lower is better)
Translates to: CDFILIRNTPNRHHGSRSPVFRM*TRGRQL
Trigger: TAATTGTCTGCCACGAGTGCACATTCTGAAAACAGG...AGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR GCA 90 bp GATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGGCCAGCTTCCATCTAGATaGATAACGTTATTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: DFILIRNTPNRHHGSRSGQLPSR*ITLFLE
Trigger: TTCCAGAAATAACGTTATGCATCTAGATGGAAGCTG...GCCAGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CCA 90 bp ACACACCAAATAGGCATCATGGCAGCAGATCTGGCTGCTAGTGTTTTAAATACATCTGTCAATGTTCTCTaGATGATCAAGAAACTCTTT +
Preference number: 4 (lower is better)
Translates to: THQIGIMAADLAASVLNTSVNVL*MIKKLF
Trigger: AAAGAGTTTCTTGATCATCCAGAGAACATTGACAGA...TGTATTTAAAACACTAGCAGCCAGATCTGCTGCCATGATGCCTATTTGGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR TCA 90 bp TGTGATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTAAAGCTCCTAGAGGATaGACTTATCCTAAAGTTGTT +
Preference number: 4 (lower is better)
Translates to: CDFILIRNTPNRHHGSRSKAPRG*TYPKVV
Trigger: AACAACTTTAGGATAAGTTCATCCTCTAGGAGCTTT...AGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR TCA 90 bp TGTGATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTATGTCTTCTTGTTTCTaGTTTGAGGCAAACTGCATA +
Preference number: 4 (lower is better)
Translates to: CDFILIRNTPNRHHGSRSMSSCF*FEANCI
Trigger: TATGCAGTTTGCCTCAAATCAGAAACAAGAAGACAT...AGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR GCA 90 bp ACTGAATTTGTGCTGAGGATAACATCTGTTTTTCATCTGAGCATCTGTTTGTTTGTTGCTATTGGTATCTaGCATCCAGACAACCATAAT +
Preference number: 4 (lower is better)
Translates to: TEFVLRITSVFHLSICLFVAIGI*HPDNHN
Trigger: ATTATGGTTGTCTGGATGGCAGATACCAATAGCAAC...AAACAAACAGATGCTCAGATGAAAAACAGATGTTATCCTCAGCACAAATTCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR TCA 90 bp ACTGAATTTGTGCTGAGGATAACATCTGTTTTTCATCTGAGCATCTGTTTGTTTTTGTCCAATGAAGCTTaGCTATTCATAGAAGAACTC +
Preference number: 4 (lower is better)
Translates to: TEFVLRITSVFHLSICLFLSNEA*LFIEEL
Trigger: GAGTTCTTCTATGAATAGTCAAGCTTCATTGGACAA...AAACAAACAGATGCTCAGATGAAAAACAGATGTTATCCTCAGCACAAATTCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR TCA 90 bp ACTGAATTTGTGCTGAGGATAACATCTGTTTTTCATCTGAGCATCTGTTTGTTTTTCAACTTGTGCCTGTaGTCTCTAGTCATAAAATAC +
Preference number: 4 (lower is better)
Translates to: TEFVLRITSVFHLSICLFFNLCL*SLVIKY
Trigger: GTATTTTATGACTAGAGATCACAGGCACAAGTTGAA...AAACAAACAGATGCTCAGATGAAAAACAGATGTTATCCTCAGCACAAATTCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR GCA 90 bp ACTGAATTTGTGCTGAGGATAACATCTGTTTTTCATCTGAGCATCTGTTTGTTTTGCAACTGTAAATGCTaGAATCACACCTATGTTTTG +
Preference number: 4 (lower is better)
Translates to: TEFVLRITSVFHLSICLFCNCKC*NHTYVL
Trigger: CAAAACATAGGTGTGATTGCAGCATTTACAGTTGCA...AAACAAACAGATGCTCAGATGAAAAACAGATGTTATCCTCAGCACAAATTCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS CCA 90 bp GCACTCGTGGCAGACAATTACCTCGGACGGTCTCTCCGCCGGAGATaGGGGTTTCGGGCCCAAGTACCAGCCTCTAGGGGCCAGATTCCC +
Preference number: 5 (lower is better)
Translates to: ALVADNYLGRSLRRR*GFRAQVPASRGQIP
Trigger: GGGAATCTGGCCCCTAGAGGCTGGTACTTGGGCCCGAAACCCCCATCTCCGGCGGAGAGACCGTCCGAGGTAATTGTCTGCCACGAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp GCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGTCACTTTGCTCCTCTTaGGGTGGCGTTCTAGTGGCA +
Preference number: 5 (lower is better)
Translates to: APGDAPTSASQSIRIIRVSLCSS*GGVLVA
Trigger: TGCCACTAGAACGCCACCCAAAGAGGAGCAAAGTGA...CACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp CTGGTCTCCAACTCCCTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAGTCTTGCTGAACTCTTaGGATCATGGATATCATAAG +
Preference number: 5 (lower is better)
Translates to: LVSNSLPAPGDAPTSASQVLLNS*DHGYHK
Trigger: CTTATGATATCCATGATCCAAAGAGTTCAGCAAGAC...TTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAGGGAGTTGGAGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp CTGGTCTCCAACTCCCTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAAATGCGTTCATTTTTaGTGGCAGAGGAAATGTCGA +
Preference number: 5 (lower is better)
Translates to: LVSNSLPAPGDAPTSASQKCVHF*WQRKCR
Trigger: TCGACATTTCCTCTGCCACAAAAAATGAACGCATTT...TTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAGGGAGTTGGAGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp GCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGAGGAATGTTTCCCTCTaGCTTCTGCCAGGAGCTAGA +
Preference number: 5 (lower is better)
Translates to: APGDAPTSASQSIRIIRVRNVSL*LLPGAR
Trigger: TCTAGCTCCTGGCAGAAGCAAGAGGGAAACATTCCT...CACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS CCA 90 bp CTGCATTTCACAGCACCCTTAAGGTTTACAGAACCGCTACATATCTaGACTGTGGCTGTGGATCTGTGGTCTGAATTCAGGAGCAACTGC +
Preference number: 5 (lower is better)
Translates to: LHFTAPLRFTEPLHI*TVAVDLWSEFRSNC
Trigger: GCAGTTGCTCCTGAATTCAGACCACAGATCCACAGCCACAGTCCAGATATGTAGCGGTTCTGTAAACCTTAAGGGTGCTGTGAAATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000419367.8
CDS CCA 90 bp CTGCATTTCACAGCACCCTTAAGGTTTACAGAACCGCTACATATCTaGACTGTGGCTGTGGATCTGTGGTCTGAATTCAGGAGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: LHFTAPLRFTEPLHI*TVAVDLWSEFRSCP
Trigger: AGGACAGCTCCTGAATTCAGACCACAGATCCACAGCCACAGTCCAGATATGTAGCGGTTCTGTAAACCTTAAGGGTGCTGTGAAATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367470.8
CDS-3UTR CAA 90 bp CTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATATTAGCTTTGGGATGTTaGAGGTTCTCACTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: LPAPGDAPTSASQSIRIILALGC*RFSLCS
Trigger: GGAGCAAAGTGAGAACCTCAAACATCCCAAAGCTAA...TATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp GCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGTTAGCTTTGGGATGTTaGAGGTTCTCACTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: APGDAPTSASQSIRIIRVLALGC*RFSLCS
Trigger: GGAGCAAAGTGAGAACCTCAAACATCCCAAAGCTAA...CACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp CCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGAGCAAGGTTCCCTACCCCTaGATCAGAACAAAACACACA +
Preference number: 5 (lower is better)
Translates to: PGDAPTSASQSIRIIRVSKVPYP*IRTKHT
Trigger: TGTGTGTTTTGTTCTGATCAAGGGGTAGGGAACCTT...GCTCACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp CTCCCAGCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACATCTGAGCATCTGTTaGTTTCAGTTTCGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LPAPGDAPTSASQSIRIIHLSIC*FQFRLL
Trigger: CAACAAGCGAAACTGAAACAAACAGATGCTCAGATG...TATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGCTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp GCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGCTTGGAGATTTATGTTaGAAAGATACTGGCCAACAG +
Preference number: 5 (lower is better)
Translates to: APGDAPTSASQSIRIIRVLGDLC*KDTGQQ
Trigger: CTGTTGGCCAGTATCTTTCAAACATAAATCTCCAAG...CACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp GCCCCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGCTTCTTGTTTCTGATTaGAGGCAAACTGCATATGAC +
Preference number: 5 (lower is better)
Translates to: APGDAPTSASQSIRIIRVLLVSD*RQTAYD
Trigger: GTCATATGCAGTTTGCCTCAAATCAGAAACAAGAAG...CACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp GATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGGCTCACTTTGCTCCTCTTaGGGTGGCGTTCTAGTGGCA +
Preference number: 5 (lower is better)
Translates to: DFILIRNTPNRHHGSRSGSLCSS*GGVLVA
Trigger: TGCCACTAGAACGCCACCCAAAGAGGAGCAAAGTGA...GCCAGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp CCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGAGCTTATCCAACTTAGCTTaGGGATGTTTGAGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: PGDAPTSASQSIRIIRVSLSNLA*GCLRFS
Trigger: TGAGAACCTCAAACATCCCAAAGCTAAGTTGGATAA...GCTCACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp ACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAACAAGGCTCCAATCTGCTGGTCTaGCTGAACTCTTTGGATCAT +
Preference number: 5 (lower is better)
Translates to: TLFLEMRATYNVKQAKQGSNLLV*LNSLDH
Trigger: ATGATCCAAAGAGTTCAGCAAGACCAGCAGATTGGA...GCCTTGTTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp AGATGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTCCATTTTCTATTTCCTaGGCCCAGCGTGTAAGTCCA +
Preference number: 5 (lower is better)
Translates to: RCITLFLEMRATYNVKQAPFSIS*AQRVSP
Trigger: TGGACTTACACGCTGGGCCAAGGAAATAGAAAATGG...AGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp TACATGCAGCTTCCATCTAGATGCATAACGTTATTTCTGGAAATGCGGGCCACCATGTTTTCTAGCTCCTaGTTTCTCCTCACTGCTCAC +
Preference number: 5 (lower is better)
Translates to: YMQLPSRCITLFLEMRATMFSSS*FLLTAH
Trigger: GTGAGCAGTGAGGAGAAACAAGGAGCTAGAAAACAT...GGTGGCCCGCATTTCCAGAAATAACGTTATGCATCTAGATGGAAGCTGCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp CCAGGTGATGCTCCTACCTCAGCCTCTCAAAGCATTAGGATTATACGTGTGAGCAAGCCTACTAAGTATTaGACTGTCTTGCTTTCACTG +
Preference number: 5 (lower is better)
Translates to: PGDAPTSASQSIRIIRVSKPTKY*TVLLSL
Trigger: CAGTGAAAGCAAGACAGTCAAATACTTAGTAGGCTT...GCTCACACGTATAATCCTAATGCTTTGAGAGGCTGAGGTAGGAGCATCACCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS CCA 90 bp CTTCAGCTGACTCATCGTCAAATTTATAATCACACAACATTACAGTaGATCCAGGAAGGGGAACAAAGACTCGATAAGGGAGGACGTGGA +
Preference number: 5 (lower is better)
Translates to: LQLTHRQIYNHTTLQ*IQEGEQRLDKGGRG
Trigger: TCCACGTCCTCCCTTATCGAGTCTTTGTTCCCCTTCCTGGATCCACTGTAATGTTGTGTGATTATAAATTTGACGATGAGTCAGCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
ENST00000478571.1
CDS-3UTR CAA 90 bp ACACACCAAATAGGCATCATGGCAGCAGATCTGGCTGCTAGTGTTTTAAATACACCATTTTCTATTTCCTaGGCCCAGCGTGTAAGTCCA +
Preference number: 5 (lower is better)
Translates to: THQIGIMAADLAASVLNTPFSIS*AQRVSP
Trigger: TGGACTTACACGCTGGGCCAAGGAAATAGAAAATGG...TGTATTTAAAACACTAGCAGCCAGATCTGCTGCCATGATGCCTATTTGGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp ACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAACAAGGCATGACAATGTTGCTATaGGTATCTGCCATCCAGACA +
Preference number: 5 (lower is better)
Translates to: TLFLEMRATYNVKQAKQGMTMLL*VSAIQT
Trigger: TGTCTGGATGGCAGATACCAATAGCAACATTGTCAT...GCCTTGTTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp AGATGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTATGTTTTCTAGCTCCTaGTTTCTCCTCACTGCTCAC +
Preference number: 5 (lower is better)
Translates to: RCITLFLEMRATYNVKQAMFSSS*FLLTAH
Trigger: GTGAGCAGTGAGGAGAAACAAGGAGCTAGAAAACAT...AGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp TACATGCAGCTTCCATCTAGATGCATAACGTTATTTCTGGAAATGCGGGCCACCCTTTTGGGTACATTGTaGCTGTTAGGAAGCCTACTA +
Preference number: 5 (lower is better)
Translates to: YMQLPSRCITLFLEMRATLLGTL*LLGSLL
Trigger: TAGTAGGCTTCCTAACAGCAACAATGTACCCAAAAG...GGTGGCCCGCATTTCCAGAAATAACGTTATGCATCTAGATGGAAGCTGCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp CTCAGAATTCTACCCTCTTTTGGGTACATTGTTGCTGTTAGGAAGCCTACTAAGTTAGCTTTGGGATGTTaGAGGTTCTCACTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: LRILPSFGYIVAVRKPTKLALGC*RFSLCS
Trigger: GGAGCAAAGTGAGAACCTCAAACATCCCAAAGCTAA...CTTAGTAGGCTTCCTAACAGCAACAATGTACCCAAAAGAGGGTAGAATTCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp TACATGCAGCTTCCATCTAGATGCATAACGTTATTTCTGGAAATGCGGGCCACCGTCTTGCTGAACTCTTaGGATCATGGATATCATAAG +
Preference number: 5 (lower is better)
Translates to: YMQLPSRCITLFLEMRATVLLNS*DHGYHK
Trigger: CTTATGATATCCATGATCCAAAGAGTTCAGCAAGAC...GGTGGCCCGCATTTCCAGAAATAACGTTATGCATCTAGATGGAAGCTGCATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp ACACACCAAATAGGCATCATGGCAGCAGATCTGGCTGCTAGTGTTTTAAATACATCCAATCTGCTGGTCTaGCTGAACTCTTTGGATCAT +
Preference number: 5 (lower is better)
Translates to: THQIGIMAADLAASVLNTSNLLV*LNSLDH
Trigger: ATGATCCAAAGAGTTCAGCAAGACCAGCAGATTGGA...TGTATTTAAAACACTAGCAGCCAGATCTGCTGCCATGATGCCTATTTGGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp GATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGGCCCATTTTCTATTTCCTaGGCCCAGCGTGTAAGTCCA +
Preference number: 5 (lower is better)
Translates to: DFILIRNTPNRHHGSRSGPFSIS*AQRVSP
Trigger: TGGACTTACACGCTGGGCCAAGGAAATAGAAAATGG...GCCAGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp TGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAAAAGGTTCCCTACCCCTaGATCAGAACAAAACACACA +
Preference number: 5 (lower is better)
Translates to: CITLFLEMRATYNVKQAKKVPYP*IRTKHT
Trigger: TGTGTGTTTTGTTCTGATCAAGGGGTAGGGAACCTT...TTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp TACATGCAGCTTCCATCTAGATGCATAACGTTATTTCTGGAAATGCGGGCCACCGTCATTTACAATACCTaGAGTCTAGGCCTGGATTTT +
Preference number: 5 (lower is better)
Translates to: YMQLPSRCITLFLEMRATVIYNT*SLGLDF
Trigger: AAAATCCAGGCCTAGACTCAAGGTATTGTAAATGAC...GGTGGCCCGCATTTCCAGAAATAACGTTATGCATCTAGATGGAAGCTGCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp AGATGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTTTATCCAACTTAGCTTaGGGATGTTTGAGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: RCITLFLEMRATYNVKQALSNLA*GCLRFS
Trigger: TGAGAACCTCAAACATCCCAAAGCTAAGTTGGATAA...AGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp CTCAGAATTCTACCCTCTTTTGGGTACATTGTTGCTGTTAGGAAGCCTACTAAGTCTACGCAGGGCATTTaGAAAATCATTTGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: LRILPSFGYIVAVRKPTKSTQGI*KIICQF
Trigger: GAACTGGCAAATGATTTTCAAAATGCCCTGCGTAGA...CTTAGTAGGCTTCCTAACAGCAACAATGTACCCAAAAGAGGGTAGAATTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp ACACACCAAATAGGCATCATGGCAGCAGATCTGGCTGCTAGTGTTTTAAATACATCTACGCAGGGCATTTaGAAAATCATTTGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: THQIGIMAADLAASVLNTSTQGI*KIICQF
Trigger: GAACTGGCAAATGATTTTCAAAATGCCCTGCGTAGA...TGTATTTAAAACACTAGCAGCCAGATCTGCTGCCATGATGCCTATTTGGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp GATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGGCTCCAATCTGCTGGTCTaGCTGAACTCTTTGGATCAT +
Preference number: 5 (lower is better)
Translates to: DFILIRNTPNRHHGSRSGSNLLV*LNSLDH
Trigger: ATGATCCAAAGAGTTCAGCAAGACCAGCAGATTGGA...GCCAGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp TGTTACATGCAGCTTCCATCTAGATGCATAACGTTATTTCTGGAAATGCGGGCCACAGCATCTTTAACTTaGGGTTTACTGCTGTGGATA +
Preference number: 5 (lower is better)
Translates to: CYMQLPSRCITLFLEMRATASLT*GLLLWI
Trigger: TATCCACAGCAGTAAACCCAAAGTTAAAGATGCTGT...GGCCCGCATTTCCAGAAATAACGTTATGCATCTAGATGGAAGCTGCATGTAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp AGATGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTACAGCATCTTTAACTTaGGGTTTACTGCTGTGGATA +
Preference number: 5 (lower is better)
Translates to: RCITLFLEMRATYNVKQATASLT*GLLLWI
Trigger: TATCCACAGCAGTAAACCCAAAGTTAAAGATGCTGT...AGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp TACATGCAGCTTCCATCTAGATGCATAACGTTATTTCTGGAAATGCGGGCCACCAATTGGTTGTTTTGGTaGTTCATCATCTGTGTTGTC +
Preference number: 5 (lower is better)
Translates to: YMQLPSRCITLFLEMRATNWLFW*FIICVV
Trigger: GACAACACAGATGATGAACAACCAAAACAACCAATT...GGTGGCCCGCATTTCCAGAAATAACGTTATGCATCTAGATGGAAGCTGCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp TGTTACATGCAGCTTCCATCTAGATGCATAACGTTATTTCTGGAAATGCGGGCCAAATGCGTTCATTTTTaGTGGCAGAGGAAATGTCGA +
Preference number: 5 (lower is better)
Translates to: CYMQLPSRCITLFLEMRAKCVHF*WQRKCR
Trigger: TCGACATTTCCTCTGCCACAAAAAATGAACGCATTT...GGCCCGCATTTCCAGAAATAACGTTATGCATCTAGATGGAAGCTGCATGTAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp TGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAAATGACAATGTTGCTATaGGTATCTGCCATCCAGACA +
Preference number: 5 (lower is better)
Translates to: CITLFLEMRATYNVKQAKMTMLL*VSAIQT
Trigger: TGTCTGGATGGCAGATACCAATAGCAACATTGTCAT...TTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp TGTGATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTAGGAATGTTTCCCTCTaGCTTCTGCCAGGAGCTAGA +
Preference number: 5 (lower is better)
Translates to: CDFILIRNTPNRHHGSRSRNVSL*LLPGAR
Trigger: TCTAGCTCCTGGCAGAAGCAAGAGGGAAACATTCCT...AGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp ACACACCAAATAGGCATCATGGCAGCAGATCTGGCTGCTAGTGTTTTAAATACACTTTTGGGTACATTGTaGCTGTTAGGAAGCCTACTA +
Preference number: 5 (lower is better)
Translates to: THQIGIMAADLAASVLNTLLGTL*LLGSLL
Trigger: TAGTAGGCTTCCTAACAGCAACAATGTACCCAAAAG...TGTATTTAAAACACTAGCAGCCAGATCTGCTGCCATGATGCCTATTTGGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp TGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAACATCTGAGCATCTGTTaGTTTCAGTTTCGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: CITLFLEMRATYNVKQAKHLSIC*FQFRLL
Trigger: CAACAAGCGAAACTGAAACAAACAGATGCTCAGATG...TTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS GCA 90 bp ACCCTAATCACTGAAGTAATGAAAGGAGATACCCGCAGCAAGGACTaGAACTGTAAATGCTGCAATCACACCTATGTTTTGCTGAATTTT +
Preference number: 5 (lower is better)
Translates to: TLITEVMKGDTRSKD*NCKCCNHTYVLLNF
Trigger: AAAATTCAGCAAAACATAGGTGTGATTGCAGCATTTACAGTTGCAGTCCTTGCTGCGGGTATCTCCTTTCATTACTTCAGTGATTAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
ENST00000461662.1
CDS-3UTR CAA 90 bp ACACACCAAATAGGCATCATGGCAGCAGATCTGGCTGCTAGTGTTTTAAATACACTTGGAGATTTATGTTaGAAAGATACTGGCCAACAG +
Preference number: 5 (lower is better)
Translates to: THQIGIMAADLAASVLNTLGDLC*KDTGQQ
Trigger: CTGTTGGCCAGTATCTTTCAAACATAAATCTCCAAG...TGTATTTAAAACACTAGCAGCCAGATCTGCTGCCATGATGCCTATTTGGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp CTCAGAATTCTACCCTCTTTTGGGTACATTGTTGCTGTTAGGAAGCCTACTAAGTTATCCAACTTAGCTTaGGGATGTTTGAGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: LRILPSFGYIVAVRKPTKLSNLA*GCLRFS
Trigger: TGAGAACCTCAAACATCCCAAAGCTAAGTTGGATAA...CTTAGTAGGCTTCCTAACAGCAACAATGTACCCAAAAGAGGGTAGAATTCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp TGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAAACAGCATCTTTAACTTaGGGTTTACTGCTGTGGATA +
Preference number: 5 (lower is better)
Translates to: CITLFLEMRATYNVKQAKTASLT*GLLLWI
Trigger: TATCCACAGCAGTAAACCCAAAGTTAAAGATGCTGT...TTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp TGTTACATGCAGCTTCCATCTAGATGCATAACGTTATTTCTGGAAATGCGGGCCAATTGGTTGTTTTGGTaGTTCATCATCTGTGTTGTC +
Preference number: 5 (lower is better)
Translates to: CYMQLPSRCITLFLEMRANWLFW*FIICVV
Trigger: GACAACACAGATGATGAACAACCAAAACAACCAATT...GGCCCGCATTTCCAGAAATAACGTTATGCATCTAGATGGAAGCTGCATGTAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp CTCAGAATTCTACCCTCTTTTGGGTACATTGTTGCTGTTAGGAAGCCTACTAAGGTCGAAGTATGGTTCTaGAAAATTCTCCTACTTCCA +
Preference number: 5 (lower is better)
Translates to: LRILPSFGYIVAVRKPTKVEVWF*KILLLP
Trigger: TGGAAGTAGGAGAATTTTCAAGAACCATACTTCGAC...CTTAGTAGGCTTCCTAACAGCAACAATGTACCCAAAAGAGGGTAGAATTCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp TGCATAACGTTATTTCTGGAAATGCGGGCCACCTACAATGTAAAGCAGGCTAAACTTCTTGTTTCTGATTaGAGGCAAACTGCATATGAC +
Preference number: 5 (lower is better)
Translates to: CITLFLEMRATYNVKQAKLLVSD*RQTAYD
Trigger: GTCATATGCAGTTTGCCTCAAATCAGAAACAAGAAG...TTTAGCCTGCTTTACATTGTAGGTGGCCCGCATTTCCAGAAATAACGTTATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp GATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGGCTCTTGTCATGTTAGTTaGTTTCAACTTGTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: DFILIRNTPNRHHGSRSGSCHVS*FQLVPV
Trigger: CACAGGCACAAGTTGAAACAAACTAACATGACAAGA...GCCAGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS TCA 90 bp TGTGTGATCCAACATCTCCATAAAATGGTCCCTGATTTCTTCAGCTaGCTCATCGTCAAATTTATAATCACACAACATTACAGTGGATCC +
Preference number: 5 (lower is better)
Translates to: CVIQHLHKMVPDFFS*LIVKFIITQHYSGS
Trigger: GGATCCACTGTAATGTTGTGTGATTATAAATTTGACGATGAGTCAGCTGAAGAAATCAGGGACCATTTTATGGAGATGTTGGATCACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
ENST00000478571.1
CDS-3UTR CAA 90 bp GATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGGCAGAATGACTAGTTGCTaGAGTATTTCCTCTAGAAGA +
Preference number: 5 (lower is better)
Translates to: DFILIRNTPNRHHGSRSGRMTSC*SISSRR
Trigger: TCTTCTAGAGGAAATACTCAAGCAACTAGTCATTCT...GCCAGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000419367.8
CDS-3UTR CAA 90 bp GATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGGCAATTGGTTGTTTTGGTaGTTCATCATCTGTGTTGTC +
Preference number: 5 (lower is better)
Translates to: DFILIRNTPNRHHGSRSGNWLFW*FIICVV
Trigger: GACAACACAGATGATGAACAACCAAAACAACCAATT...GCCAGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp TGTGATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTCTGCATATGACAATGTaGCTATTGGTATCTGCCATC +
Preference number: 5 (lower is better)
Translates to: CDFILIRNTPNRHHGSRSLHMTM*LLVSAI
Trigger: GATGGCAGATACCAATAGCAACATTGTCATATGCAG...AGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp TGTGATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTCTTGGAGATTTATGTTaGAAAGATACTGGCCAACAG +
Preference number: 5 (lower is better)
Translates to: CDFILIRNTPNRHHGSRSLGDLC*KDTGQQ
Trigger: CTGTTGGCCAGTATCTTTCAAACATAAATCTCCAAG...AGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp TGTGATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGTCGAAGTATGGTTCTaGAAAATTCTCCTACTTCCA +
Preference number: 5 (lower is better)
Translates to: CDFILIRNTPNRHHGSRSVEVWF*KILLLP
Trigger: TGGAAGTAGGAGAATTTTCAAGAACCATACTTCGAC...AGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp ACTGAATTTGTGCTGAGGATAACATCTGTTTTTCATCTGAGCATCTGTTTGTTTCTGCATATGACAATGTaGCTATTGGTATCTGCCATC +
Preference number: 5 (lower is better)
Translates to: TEFVLRITSVFHLSICLFLHMTM*LLVSAI
Trigger: GATGGCAGATACCAATAGCAACATTGTCATATGCAG...AAACAAACAGATGCTCAGATGAAAAACAGATGTTATCCTCAGCACAAATTCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp TGTGATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTTCTTGTCATGTTAGTTaGTTTCAACTTGTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: CDFILIRNTPNRHHGSRSSCHVS*FQLVPV
Trigger: CACAGGCACAAGTTGAAACAAACTAACATGACAAGA...AGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS-3UTR CAA 90 bp TGTGATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTGTCATTTACAATACCTaGAGTCTAGGCCTGGATTTT +
Preference number: 5 (lower is better)
Translates to: CDFILIRNTPNRHHGSRSVIYNT*SLGLDF
Trigger: AAAATCCAGGCCTAGACTCAAGGTATTGTAAATGAC...AGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS TCA 90 bp ATTGGTTGTTTTGGTTGTTCATCATCTGTGTTGTCCAATGAAGCTTaGCTATTCATAGAAGAACTCATACAAGCTGTGTTTGTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: IGCFGCSSSVLSNEA*LFIEELIQAVFVSS
Trigger: AGAGGAAACAAACACAGCTTGTATGAGTTCTTCTATGAATAGTCAAGCTTCATTGGACAACACAGATGATGAACAACCAAAACAACCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS-3UTR CAA 90 bp TGTGATTTCATTTTAATCAGAAACACACCAAATAGGCATCATGGCAGCAGATCTAGAATGACTAGTTGCTaGAGTATTTCCTCTAGAAGA +
Preference number: 5 (lower is better)
Translates to: CDFILIRNTPNRHHGSRSRMTSC*SISSRR
Trigger: TCTTCTAGAGGAAATACTCAAGCAACTAGTCATTCT...AGATCTGCTGCCATGATGCCTATTTGGTGTGTTTCTGATTAAAATGAAATCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000419367.8
CDS-3UTR CAA 90 bp ACTGAATTTGTGCTGAGGATAACATCTGTTTTTCATCTGAGCATCTGTTTGTTTAAGCCTACTAAGTATTaGACTGTCTTGCTTTCACTG +
Preference number: 5 (lower is better)
Translates to: TEFVLRITSVFHLSICLFKPTKY*TVLLSL
Trigger: CAGTGAAAGCAAGACAGTCAAATACTTAGTAGGCTT...AAACAAACAGATGCTCAGATGAAAAACAGATGTTATCCTCAGCACAAATTCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000367470.8
CDS CCA 72 bp GCAGACAATTACCTCGGACGGTCTCTCCGCCGGAGATaGGGGTTTCGGGCCCAAGTACCAGCCTCTAGGGGC +
Preference number: 6 (lower is better)
Translates to: ADNYLGRSLRRR*GFRAQVPASRG
Trigger: GCCCCTAGAGGCTGGTACTTGGGCCCGAAACCCCCATCTCCGGCGGAGAGACCGTCCGAGGTAATTGTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS CCA 72 bp GGAACTAAAATCTCCTGTTTTCAGAATGTGCACTCGTaGCAGACAATTACCTCGGACGGTCTCTCCGCCGGA +
Preference number: 6 (lower is better)
Translates to: GTKISCFQNVHS*QTITSDGLSAG
Trigger: TCCGGCGGAGAGACCGTCCGAGGTAATTGTCTGCCACGAGTGCACATTCTGAAAACAGGAGATTTTAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS CCA 72 bp GAACCGCTACATATCTGGACTGTGGCTGTGGATCTGTaGTCTGAATTCAGGAGCAACTGCGTTAGCACTCTG +
Preference number: 6 (lower is better)
Translates to: EPLHIWTVAVDL*SEFRSNCVSTL
Trigger: CAGAGTGCTAACGCAGTTGCTCCTGAATTCAGACCACAGATCCACAGCCACAGTCCAGATATGTAGCGGTTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000419367.8
CDS CCA 72 bp GGTTTACAGAACCGCTACATATCTGGACTGTGGCTGTaGATCTGTGGTCTGAATTCAGGAGCAACTGCGTTA +
Preference number: 6 (lower is better)
Translates to: GLQNRYISGLWL*ICGLNSGATAL
Trigger: TAACGCAGTTGCTCCTGAATTCAGACCACAGATCCACAGCCACAGTCCAGATATGTAGCGGTTCTGTAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287859.11
ENST00000419367.8
CDS CCA 72 bp ACAGCACCCTTAAGGTTTACAGAACCGCTACATATCTaGACTGTGGCTGTGGATCTGTGGTCTGAATTCAGG +
Preference number: 6 (lower is better)
Translates to: TAPLRFTEPLHI*TVAVDLWSEFR
Trigger: CCTGAATTCAGACCACAGATCCACAGCCACAGTCCAGATATGTAGCGGTTCTGTAAACCTTAAGGGTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS CCA 72 bp GAACCGCTACATATCTGGACTGTGGCTGTGGATCTGTaGTCTGAATTCAGGAGCTGTCCTTCTAATAGGTCA +
Preference number: 6 (lower is better)
Translates to: EPLHIWTVAVDL*SEFRSCPSNRS
Trigger: TGACCTATTAGAAGGACAGCTCCTGAATTCAGACCACAGATCCACAGCCACAGTCCAGATATGTAGCGGTTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367470.8
CDS CCA 72 bp GGTTTACAGAACCGCTACATATCTGGACTGTGGCTGTaGATCTGTGGTCTGAATTCAGGAGCTGTCCTTCTA +
Preference number: 6 (lower is better)
Translates to: GLQNRYISGLWL*ICGLNSGAVLL
Trigger: TAGAAGGACAGCTCCTGAATTCAGACCACAGATCCACAGCCACAGTCCAGATATGTAGCGGTTCTGTAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367470.8
CDS CAA 90 bp GTGGCCCATTCTTCATCCAAGTTATCCAACTTAGCTTTGGGATGTTaGAGGTTCTCACTTTGCTCCTCTTTGGGTGGCGTTCTAGTGGCA +
Preference number: 6 (lower is better)
Translates to: VAHSSSKLSNLALGC*RFSLCSSLGGVLVA
Trigger: TGCCACTAGAACGCCACCCAAAGAGGAGCAAAGTGAGAACCTCAAACATCCCAAAGCTAAGTTGGATAACTTGGATGAAGAATGGGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS CAA 90 bp GCATGTTCTGTGGCCCATTCTTCATCCAAGTTATCCAACTTAGCTTaGGGATGTTTGAGGTTCTCACTTTGCTCCTCTTTGGGTGGCGTT +
Preference number: 6 (lower is better)
Translates to: ACSVAHSSSKLSNLA*GCLRFSLCSSLGGV
Trigger: AACGCCACCCAAAGAGGAGCAAAGTGAGAACCTCAAACATCCCAAAGCTAAGTTGGATAACTTGGATGAAGAATGGGCCACAGAACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS GCA 72 bp TCCAACTTAGCTTTGGGATGTTTGAGGTTCTCACTTTaGTCCTCTTTGGGTGGCGTTCTAGTGGCAAGAATC +
Preference number: 6 (lower is better)
Translates to: SNLALGCLRFSL*SSLGGVLVARI
Trigger: GATTCTTGCCACTAGAACGCCACCCAAAGAGGAGCAAAGTGAGAACCTCAAACATCCCAAAGCTAAGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS CCA 72 bp GGGATGTTTGAGGTTCTCACTTTGCTCCTCTTTGGGTaGCGTTCTAGTGGCAAGAATCACATAATCCTTTTG +
Preference number: 6 (lower is better)
Translates to: GMFEVLTLLLFG*RSSGKNHIILL
Trigger: CAAAAGGATTATGTGATTCTTGCCACTAGAACGCCACCCAAAGAGGAGCAAAGTGAGAACCTCAAACATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS TCA 72 bp ATGATCAAGAAACTCTTTGTGCCTCACCCTAATCACTaGAGTAATGAAAGGAGATACCCGCAGCAAGGACTG +
Preference number: 6 (lower is better)
Translates to: MIKKLFVPHPNH*SNERRYPQQGL
Trigger: CAGTCCTTGCTGCGGGTATCTCCTTTCATTACTTCAGTGATTAGGGTGAGGCACAAAGAGTTTCTTGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
ENST00000461662.1
CDS CAA 72 bp TCTTCATCCAAGTTATCCAACTTAGCTTTGGGATGTTaGAGGTTCTCACTTTGCTCCTCTTTGGGTGGCGTT +
Preference number: 6 (lower is better)
Translates to: SSSKLSNLALGC*RFSLCSSLGGV
Trigger: AACGCCACCCAAAGAGGAGCAAAGTGAGAACCTCAAACATCCCAAAGCTAAGTTGGATAACTTGGATGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS CAA 72 bp GTGGCCCATTCTTCATCCAAGTTATCCAACTTAGCTTaGGGATGTTTGAGGTTCTCACTTTGCTCCTCTTTG +
Preference number: 6 (lower is better)
Translates to: VAHSSSKLSNLA*GCLRFSLCSSL
Trigger: CAAAGAGGAGCAAAGTGAGAACCTCAAACATCCCAAAGCTAAGTTGGATAACTTGGATGAAGAATGGGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS GCA 72 bp AAAGGAGATACCCGCAGCAAGGACTGCAACTGTAAATaGTGCAATCACACCTATGTTTTGCTGAATTTTCAA +
Preference number: 6 (lower is better)
Translates to: KGDTRSKDCNCK*CNHTYVLLNFQ
Trigger: TTGAAAATTCAGCAAAACATAGGTGTGATTGCAGCATTTACAGTTGCAGTCCTTGCTGCGGGTATCTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
ENST00000461662.1
CDS TCA 72 bp CACTCTAAAGAAAGCCATGAGGATGATAATCCACTTTaGTACTTCCAATCTGCTGGTCTTGCTGAACTCTTT +
Preference number: 6 (lower is better)
Translates to: HSKESHEDDNPL*YFQSAGLAELF
Trigger: AAAGAGTTCAGCAAGACCAGCAGATTGGAAGTATCAAAGTGGATTATCATCCTCATGGCTTTCTTTAGAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8
CDS TCA 72 bp TTTGGTTGTTCATCATCTGTGTTGTCCAATGAAGCTTaGCTATTCATAGAAGAACTCATACAAGCTGAAAGG +
Preference number: 6 (lower is better)
Translates to: FGCSSSVLSNEA*LFIEELIQAER
Trigger: CCTTTCAGCTTGTATGAGTTCTTCTATGAATAGTCAAGCTTCATTGGACAACACAGATGATGAACAACCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461662.1
CDS TCA 72 bp TTTGGTTGTTCATCATCTGTGTTGTCCAATGAAGCTTaGCTATTCATAGAAGAACTCATACAAGCTGTGTTT +
Preference number: 6 (lower is better)
Translates to: FGCSSSVLSNEA*LFIEELIQAVF
Trigger: AAACACAGCTTGTATGAGTTCTTCTATGAATAGTCAAGCTTCATTGGACAACACAGATGATGAACAACCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287859.11
ENST00000367470.8
ENST00000419367.8