Pregenerated sensors for ODF3B (Homo sapiens)
Ensembl gene IDs: ENSG00000177989Ensembl transcript IDs: ENST00000329363.9, ENST00000401779.5, ENST00000403326.5, ENST00000405135.5, ENST00000428989.3, ENST00000437588.2, ENST00000463472.1, ENST00000468249.1, ENST00000469660.1, ENST00000682240.1
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGGGGGCCGCTCCCGCCTaGCGGGTCAGTTGTCCGCGT | + |
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Preference number: 4 (lower is better) Translates to: CGLADFKQTRVGPLPPGGGAAPA*RVSCPR Trigger: ACGCGGACAACTGACCCGCCAGGCGGGAGCGGCCCC...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 70% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR GCA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGGCGGGACCTGGGCTCTaGTGTTCCGCCTGGACACCC | + |
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Preference number: 4 (lower is better) Translates to: CGLADFKQTRVGPLPPGGAGPGL*CSAWTP Trigger: GGGTGTCCAGGCGGAACAGCAGAGCCCAGGTCCCGC...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR CCA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGTGTGCCGAGGCGCACTaGGGTACGTCGCGTTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: CGLADFKQTRVGPLPPGGCAEAH*GTSRSP Trigger: CGGGGAACGCGACGTACCCCAGTGCGCCTCGGCACA...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR TCA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGCGGAGACTTTGCCGATaGCGCGCGGACCCAAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: CGLADFKQTRVGPLPPGGRRLCR*RADPRA Trigger: CGCTCTTGGGTCCGCGCGTCATCGGCAAAGTCTCCG...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR GCA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGCGGGGAGCAATGGTGTaGCGAGGCGCACTGGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: CGLADFKQTRVGPLPPGGRGAMV*RGALGY Trigger: GTACCCCAGTGCGCCTCGGCACACCATTGCTCCCCG...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR GCA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGGCTCCGGGAAGTACCTaGCGGTGTTGGGCGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: CGLADFKQTRVGPLPPGGAPGST*RCWAAA Trigger: AGCTGCCGCCCAACACCGGCAGGTACTTCCCGGAGC...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR CCA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGATAGGCCGCGGGACCTaGGCTCTGCTGTTCCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: CGLADFKQTRVGPLPPGGIGRGT*ALLFRL Trigger: CAGGCGGAACAGCAGAGCCCAGGTCCCGCGGCCTAT...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR TCA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGGGCCCGGGGTCTTGCTaGGGTCCTCGAAGAAACTGC | + |
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Preference number: 4 (lower is better) Translates to: CGLADFKQTRVGPLPPGGGPGSC*GPRRNC Trigger: GCAGTTTCTTCGAGGACCTCAGCAAGACCCCGGGCC...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR GCA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGGGTCCTCGAAGAAACTaGCAGCCGCTCTGCGGCCGT | + |
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Preference number: 4 (lower is better) Translates to: CGLADFKQTRVGPLPPGGGPRRN*QPLCGR Trigger: ACGGCCGCAGAGCGGCTGGCAGTTTCTTCGAGGACC...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR CCA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGGCGGCAGCTTGTATTTaGGCCCGGGGCCTCCGTAGT | + |
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Preference number: 4 (lower is better) Translates to: CGLADFKQTRVGPLPPGGAAACI*ARGLRS Trigger: ACTACGGAGGCCCCGGGCCCAAATACAAGCTGCCGC...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR CCA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGGTAGGCCGCGGGCCCTaGCTTCCGAGTGTTGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: CGLADFKQTRVGPLPPGGVGRGP*LPSVVL Trigger: CAAGACAACACTCGGAAGCCAGGGCCCGCGGCCTAC...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR CCA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGTTAAGCAAACACGTGTaGGGCCGCTCCCGCCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: CGLADFKQTRVGPLPPGGLSKHV*GRSRLA Trigger: CGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAA...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR GCA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGAACTGCCAGCCGCTCTaGGGCCGTAGATGGAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: CGLADFKQTRVGPLPPGGNCQPL*GRRWSK Trigger: CTTGCTCCATCTACGGCCGCAGAGCGGCTGGCAGTT...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR CCA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGAGTTTCGGGGAGCAATaGTGTGCCGAGGCGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: CGLADFKQTRVGPLPPGGSFGEQ*CAEAHW Trigger: CCAGTGCGCCTCGGCACACCATTGCTCCCCGAAACT...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR CCA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGCTCTGCTGTTCCGCCTaGACACCCCAGTTTCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: CGLADFKQTRVGPLPPGGLCCSA*TPQFRG Trigger: TCCCCGAAACTGGGGTGTCCAGGCGGAACAGCAGAG...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR CCA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGCTCTGCGGCCGTAGATaGAGCAAGTTGGGGCGGAGA | + |
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Preference number: 4 (lower is better) Translates to: CGLADFKQTRVGPLPPGGLCGRR*SKLGRR Trigger: TCTCCGCCCCAACTTGCTCCATCTACGGCCGCAGAG...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR CCA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGTTCCGAGTGTTGTCTTaGGGGAGCGAAGTCCGCGCC | + |
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Preference number: 4 (lower is better) Translates to: CGLADFKQTRVGPLPPGGFRVLS*GSEVRA Trigger: GGCGCGGACTTCGCTCCCCCAAGACAACACTCGGAA...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR CCA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGGGACTTGTAGACCCCTaGACTCACGACCTGATAGGC | + |
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Preference number: 4 (lower is better) Translates to: CGLADFKQTRVGPLPPGGGLVDP*THDLIG Trigger: GCCTATCAGGTCGTGAGTCCAGGGGTCTACAAGTCC...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR CCA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGAGTACCTGCCGGTGTTaGGCGGCAGCTTGTATTTGG | + |
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Preference number: 4 (lower is better) Translates to: CGLADFKQTRVGPLPPGGSTCRC*AAACIW Trigger: CCAAATACAAGCTGCCGCCCAACACCGGCAGGTACT...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR CCA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGGTAGATGGAGCAAGTTaGGGCGGAGACTTTGCCGAT | + |
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Preference number: 4 (lower is better) Translates to: CGLADFKQTRVGPLPPGGVDGAS*GGDFAD Trigger: ATCGGCAAAGTCTCCGCCCCAACTTGCTCCATCTAC...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS CCA 90 bp | GGGGCGCCGTCGGTGCCGCGCACGGTCATGCGAGCGGGCACCAGGTaGCCTGGCCCGGGGCCGCACGTCGTCTGCGGTGTTGGGCGGCAG | + |
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Preference number: 5 (lower is better) Translates to: GAPSVPRTVMRAGTR*PGPGPHVVCGVGRQ Trigger: CTGCCGCCCAACACCGCAGACGACGTGCGGCCCCGGGCCAGGCCACCTGGTGCCCGCTCGCATGACCGTGCGCGGCACCGACGGCGCCCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000401779.5 |
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| CDS GCA 90 bp | AGCGGCGTGGGCGGCCGTAGATGGAGTAGGCGGGGGCGCCGTCGGTaGCGCGCACGGTCATGCGAGCGGGCACCAGGTGGCCTGGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: SGVGGRRWSRRGRRR*RARSCERAPGGLAR Trigger: CCGGGCCAGGCCACCTGGTGCCCGCTCGCATGACCGTGCGCGGCACCGACGGCGCCCCCGCCTACTCCATCTACGGCCGCCCACGCCGCT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000329363.9 ENST00000401779.5 ENST00000405135.5 ENST00000428989.3 ENST00000468249.1 ENST00000682240.1 |
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| CDS CCA 90 bp | GTCTCGGGCGTCTGTGGCTCCCGAGAGTCCCCCTCCCGCCCTCGGTaGGGTCTCGACGTTCGGACGCGGCGCAGCGCTGGGGTCCCGGCC | + |
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Preference number: 5 (lower is better) Translates to: VSGVCGSRESPSRPR*GLDVRTRRSAGVPA Trigger: GGCCGGGACCCCAGCGCTGCGCCGCGTCCGAACGTCGAGACCCCACCGAGGGCGGGAGGGGGACTCTCGGGAGCCACAGACGCCCGAGAC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000468249.1 |
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| CDS CCA 90 bp | GCGGCAGCTTGTATTTGGGCCCGGGGCCTCCGTAGTGCGCCGCGATaGGGCCGCGGGGCCGGTGTGGCCGCCAAAGGCCCACCCAGGCGT | + |
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Preference number: 5 (lower is better) Translates to: AAACIWARGLRSAPR*GRGAGVAAKGPPRR Trigger: ACGCCTGGGTGGGCCTTTGGCGGCCACACCGGCCCCGCGGCCCCATCGCGGCGCACTACGGAGGCCCCGGGCCCAAATACAAGCTGCCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000329363.9 ENST00000401779.5 ENST00000403326.5 ENST00000405135.5 ENST00000428989.3 ENST00000682240.1 |
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| CDS CCA 90 bp | GGTGATCCCTGGCCGGTCCCGCCCGGCGTGGGTCTCGGGCGTCTGTaGCTCCCGAGAGTCCCCCTCCCGCCCTCGGTGGGGTCTCGACGT | + |
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Preference number: 5 (lower is better) Translates to: GDPWPVPPGVGLGRL*LPRVPLPPSVGSRR Trigger: ACGTCGAGACCCCACCGAGGGCGGGAGGGGGACTCTCGGGAGCCACAGACGCCCGAGACCCACGCCGGGCGGGACCGGCCAGGGATCACC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000468249.1 |
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| CDS TCA 90 bp | TCGCTCCGGGAAGTACCTGCCAGGTCCCGGAGTGAGGAAGGGCGCTaGGCGGCGTGGGCGGCCGTAGATGGAGTAGGCGGGGGCGCCGTC | + |
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Preference number: 5 (lower is better) Translates to: SLREVPARSRSEEGR*AAWAAVDGVGGGAV Trigger: GACGGCGCCCCCGCCTACTCCATCTACGGCCGCCCACGCCGCTCAGCGCCCTTCCTCACTCCGGGACCTGGCAGGTACTTCCCGGAGCGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000329363.9 ENST00000401779.5 ENST00000428989.3 ENST00000469660.1 ENST00000682240.1 |
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| CDS CCA 90 bp | CTGCGGACAGAAGGCGGTGGCCGCGGCCCCTGCACCGCAAATTCTTaGGGAGCGCACTTTCCCACTACCCTGGGATCAGCGCGGGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: LRTEGGGRGPCTANS*GAHFPTTLGSARGG Trigger: CCCGCCCCGCGCTGATCCCAGGGTAGTGGGAAAGTGCGCTCCCCAAGAATTTGCGGTGCAGGGGCCGCGGCCACCGCCTTCTGTCCGCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000437588.2 ENST00000682240.1 |
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| CDS CCA 90 bp | CCGCTCGCTCCGGGAAGTACCTGCCTGCGGGGCGGATCAAGGGTGTaGGGGGCTAGAACTGCGTGGGAGCCAGGTCCCGGAGTGAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: PLAPGSTCLRGGSRV*GARTAWEPGPGVRK Trigger: CTTCCTCACTCCGGGACCTGGCTCCCACGCAGTTCTAGCCCCCCACACCCTTGATCCGCCCCGCAGGCAGGTACTTCCCGGAGCGAGCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000405135.5 |
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| CDS CCA 90 bp | CCGCTCGCTCCGGGAAGTACCTGCCTGCGGGGCGGATCAAGGGTGTaGGGGGCTAGAACTGCGTGGGAGCCTGGTGGGTACCCGAGATGG | + |
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Preference number: 5 (lower is better) Translates to: PLAPGSTCLRGGSRV*GARTAWEPGGYPRW Trigger: CCATCTCGGGTACCCACCAGGCTCCCACGCAGTTCTAGCCCCCCACACCCTTGATCCGCCCCGCAGGCAGGTACTTCCCGGAGCGAGCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000463472.1 ENST00000468249.1 |
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| CDS-3UTR CAA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGCGCCTGGCGGGTCAGTaGTCCGCGTCGGTCACCAGC | + |
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Preference number: 5 (lower is better) Translates to: CGLADFKQTRVGPLPPGGRLAGQ*SASVTS Trigger: GCTGGTGACCGACGCGGACAACTGACCCGCCAGGCG...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS GCA 90 bp | TTCGGAGTTGGGACACGGCCCCAGCCGTGGCTCCACCCCAGGCCTTaGGCCAGGACGCGCAGAGAGAGAGAGAGAGAGGCGGACACGATG | + |
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Preference number: 5 (lower is better) Translates to: FGVGTRPQPWLHPRP*ARTRREREREADTM Trigger: CATCGTGTCCGCCTCTCTCTCTCTCTCTCTGCGCGTCCTGGCGCAAGGCCTGGGGTGGAGCCACGGCTGGGGCCGTGTCCCAACTCCGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468249.1 |
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| CDS CCA 90 bp | GCCGCGGGGCTTCCGGTGCTGATCCACGTTGTAGGCCGCGGGCCCTaGCTTCCGAGTGTTGTCTTGGGGGAGCGAAGTCCGCGCCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: AAGLPVLIHVVGRGP*LPSVVLGERSPRQN Trigger: ATTCTGGCGCGGACTTCGCTCCCCCAAGACAACACTCGGAAGCCAGGGCCCGCGGCCTACAACGTGGATCAGCACCGGAAGCCCCGCGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000329363.9 ENST00000401779.5 ENST00000403326.5 ENST00000405135.5 ENST00000468249.1 ENST00000682240.1 |
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| CDS CCA 90 bp | CGCCAGCAAAACAAACGCGAGCTTCCTTCCCGGCTGTGTGGAGCTTaGGGCCGGGAGCGGATCCAGGGCCATCACCCGGACTCCAGGCGC | + |
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Preference number: 5 (lower is better) Translates to: RQQNKRELPSRLCGA*GRERIQGHHPDSRR Trigger: GCGCCTGGAGTCCGGGTGATGGCCCTGGATCCGCTCCCGGCCCCAAGCTCCACACAGCCGGGAAGGAAGCTCGCGTTTGTTTTGCTGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437588.2 |
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| CDS-3UTR CAA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGGTTGGGGCGGAGACTTaGCCGATGACGCGCGGACCC | + |
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Preference number: 5 (lower is better) Translates to: CGLADFKQTRVGPLPPGGVGAET*PMTRGP Trigger: GGGTCCGCGCGTCATCGGCAAAGTCTCCGCCCCAAC...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS TCA 90 bp | CTCTGCGGCCGTAGATGGAGCAAGTTGGGGCGGAGACTTTGCCGATaGCGCGCGGACCCAAGAGCGAGGGCACCGTATAGGCCGCGGGAC | + |
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Preference number: 5 (lower is better) Translates to: LCGRRWSKLGRRLCR*RADPRARAPYRPRD Trigger: GTCCCGCGGCCTATACGGTGCCCTCGCTCTTGGGTCCGCGCGTCATCGGCAAAGTCTCCGCCCCAACTTGCTCCATCTACGGCCGCAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000329363.9 ENST00000401779.5 ENST00000403326.5 ENST00000405135.5 ENST00000428989.3 ENST00000463472.1 ENST00000468249.1 ENST00000469660.1 ENST00000682240.1 |
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| CDS GCA 90 bp | TACGGCTCGCAGCACCTGCGGACAGAAGGCGGTGGCCGCGGCCCCTaGACCGCAAATTCTTGGGGAGCGCACTTTCCCACTACCCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: YGSQHLRTEGGGRGP*TANSWGAHFPTTLG Trigger: TCCCAGGGTAGTGGGAAAGTGCGCTCCCCAAGAATTTGCGGTGCAGGGGCCGCGGCCACCGCCTTCTGTCCGCAGGTGCTGCGAGCCGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000437588.2 ENST00000682240.1 |
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| CDS CCA 90 bp | CCCTGGGCTCCAGGCCACCTGATCCACGTTGTAGGCCGCGGGCCCTaGCTTCCGAGTGTTGTCTTGGGGGAGCGAAGTCCGCGCCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: PWAPGHLIHVVGRGP*LPSVVLGERSPRQN Trigger: ATTCTGGCGCGGACTTCGCTCCCCCAAGACAACACTCGGAAGCCAGGGCCCGCGGCCTACAACGTGGATCAGGTGGCCTGGAGCCCAGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000428989.3 ENST00000463472.1 ENST00000469660.1 |
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| CDS CCA 90 bp | TCCCTGGCGCCAGCAAAACAAACGCGAGCTTCCTTCCCGGCTGTGTaGAGCTTGGGGCCGGGAGCGGATCCAGGGCCATCACCCGGACTC | + |
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Preference number: 5 (lower is better) Translates to: SLAPAKQTRASFPAV*SLGPGADPGPSPGL Trigger: GAGTCCGGGTGATGGCCCTGGATCCGCTCCCGGCCCCAAGCTCCACACAGCCGGGAAGGAAGCTCGCGTTTGTTTTGCTGGCGCCAGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437588.2 |
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| CDS-3UTR CAA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGGTGTTGGGCGGCAGCTaGTATTTGGGCCCGGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: CGLADFKQTRVGPLPPGGVLGGS*YLGPGP Trigger: AGGCCCCGGGCCCAAATACAAGCTGCCGCCCAACAC...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS CCA 90 bp | AGAGGCGGACACGATGCGGACTCGCAGACTTTAAGCAAACACGTGTaGGGCCGCTCCCGCCTGGCGGGTCAGTTGTCCGCGTCGGTCACC | + |
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Preference number: 5 (lower is better) Translates to: RGGHDADSQTLSKHV*GRSRLAGQLSASVT Trigger: GGTGACCGACGCGGACAACTGACCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCATCGTGTCCGCCTCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000401779.5 ENST00000468249.1 |
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| CDS-3UTR CAA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGCAGGGGCCCGGGGTCTaGCTGAGGTCCTCGAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: CGLADFKQTRVGPLPPGGQGPGV*LRSSKK Trigger: TTTCTTCGAGGACCTCAGCAAGACCCCGGGCCCCTG...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR CAA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGCTTCCGAGTGTTGTCTaGGGGGAGCGAAGTCCGCGC | + |
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Preference number: 5 (lower is better) Translates to: CGLADFKQTRVGPLPPGGLPSVV*GERSPR Trigger: GCGCGGACTTCGCTCCCCCAAGACAACACTCGGAAG...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR CAA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGCCTGGCTTCCGAGTGTaGTCTTGGGGGAGCGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: CGLADFKQTRVGPLPPGGPGFRV*SWGSEV Trigger: GACTTCGCTCCCCCAAGACAACACTCGGAAGCCAGG...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS GCA 90 bp | CTTGCGCCAGGACGCGCAGAGAGAGAGAGAGAGAGGCGGACACGATaGGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: LAPGRAERERERRTR*GLADFKQTRVGPLP Trigger: CGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCATCGTGTCCGCCTCTCTCTCTCTCTCTCTGCGCGTCCTGGCGCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468249.1 |
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| CDS-3UTR CAA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGCGTAGATGGAGCAAGTaGGGGCGGAGACTTTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: CGLADFKQTRVGPLPPGGRRWSK*GRRLCR Trigger: TCGGCAAAGTCTCCGCCCCAACTTGCTCCATCTACG...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS-3UTR CAA 90 bp | TGCGGACTCGCAGACTTTAAGCAAACACGTGTGGGGCCGCTCCCGCCTGGCGGGAAGTACCTGCCGGTGTaGGGCGGCAGCTTGTATTTG | + |
|
Preference number: 5 (lower is better) Translates to: CGLADFKQTRVGPLPPGGKYLPV*GGSLYL Trigger: CAAATACAAGCTGCCGCCCAACACCGGCAGGTACTT...CCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS TCA 72 bp | GCGGGGCTTCCGGTGCTGCGGGCCCGGAGACACCGCTaGCCTCGCGGGGCCGGCATCCTCTCCGCGCCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AGLPVLRARRHR*PRGAGILSAPG Trigger: TCCCGGCGCGGAGAGGATGCCGGCCCCGCGAGGTCAGCGGTGTCTCCGGGCCCGCAGCACCGGAAGCCCCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463472.1 |
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| CDS CCA 72 bp | TGGCCGGTCCCGCCCGGCGTGGGTCTCGGGCGTCTGTaGCTCCCGAGAGTCCCCCTCCCGCCCTCGGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: WPVPPGVGLGRL*LPRVPLPPSVG Trigger: CCCCACCGAGGGCGGGAGGGGGACTCTCGGGAGCCACAGACGCCCGAGACCCACGCCGGGCGGGACCGGCCA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468249.1 |
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| CDS GCA 72 bp | TGCGAGAGGGCAGAGGGTGCTGGCTGCCGCCTCCACTaGCGCGGACCAGGGACCCCCTGCGTCCGCCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: CERAEGAGCRLH*RGPGTPCVRPG Trigger: GCCGGGGCGGACGCAGGGGGTCCCTGGTCCGCGGCAGTGGAGGCGGCAGCCAGCACCCTCTGCCCTCTCGCA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000463472.1 ENST00000469660.1 |
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| CDS CCA 72 bp | TCGGCGGGGGTGATCCCTGGCCGGTCCCGCCCGGCGTaGGTCTCGGGCGTCTGTGGCTCCCGAGAGTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SAGVIPGRSRPA*VSGVCGSRESP Trigger: GGGGGACTCTCGGGAGCCACAGACGCCCGAGACCCACGCCGGGCGGGACCGGCCAGGGATCACCCCCGCCGA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468249.1 |
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| CDS TCA 72 bp | GGCCAGGGGCCCGGGGGTCCTGACCAGGTCCCGGAGTaGGGAAGGGCGCTGAGCGGCGTGGGCGGCCGTAGA | + |
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Preference number: 6 (lower is better) Translates to: GQGPGGPDQVPE*GRALSGVGGRR Trigger: TCTACGGCCGCCCACGCCGCTCAGCGCCCTTCCTCACTCCGGGACCTGGTCAGGACCCCCGGGCCCCTGGCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000468249.1 |
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| CDS GCA 72 bp | GGCACCAGGTGGCCTGGCCCGGGGCCGCACGTCGTCTaGTGCGTGGGGAAGCGCGCGCCGAAGGTGAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: GTRWPGPGPHVV*CVGKRAPKVKA Trigger: CGCCTTCACCTTCGGCGCGCGCTTCCCCACGCAGCAGACGACGTGCGGCCCCGGGCCAGGCCACCTGGTGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000329363.9 ENST00000405135.5 ENST00000428989.3 ENST00000468249.1 ENST00000682240.1 |
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| CDS GCA 72 bp | GGCGGCCGTAGATGGAGTAGGCGGGGGCGCCGTCGGTaGCGCGCACGGTCATGCGAGCGGGCACCAGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGRRWSRRGRRR*RARSCERAPGG Trigger: GCCACCTGGTGCCCGCTCGCATGACCGTGCGCGGCACCGACGGCGCCCCCGCCTACTCCATCTACGGCCGCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000329363.9 ENST00000401779.5 ENST00000405135.5 ENST00000428989.3 ENST00000468249.1 ENST00000469660.1 ENST00000682240.1 |
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| CDS CCA 72 bp | TCCGTAGTGCGCCGCGATGGGGCCGCGGGGCCGGTGTaGCCGCCAAAGGCCCACCCAGGCGTCCGAGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SVVRRDGAAGPV*PPKAHPGVRAH Trigger: ATGGGCTCGGACGCCTGGGTGGGCCTTTGGCGGCCACACCGGCCCCGCGGCCCCATCGCGGCGCACTACGGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000329363.9 ENST00000401779.5 ENST00000403326.5 ENST00000405135.5 ENST00000428989.3 ENST00000437588.2 ENST00000682240.1 |
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| CDS CCA 72 bp | TCGGTGCCGCGCACGGTCATGCGAGCGGGCACCAGGTaGCCTGGCCCGGGGCCGCACGTCGTCTGCTGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: SVPRTVMRAGTR*PGPGPHVVCCV Trigger: CACGCAGCAGACGACGTGCGGCCCCGGGCCAGGCCACCTGGTGCCCGCTCGCATGACCGTGCGCGGCACCGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000329363.9 ENST00000405135.5 ENST00000428989.3 ENST00000468249.1 ENST00000682240.1 |
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| CDS CCA 72 bp | TGTATTTGGGCCCGGGGCCTCCGTAGTGCGCCGCGATaGGGCCGCGGGGCCGGTGTGGCCGCCAAAGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: CIWARGLRSAPR*GRGAGVAAKGP Trigger: TGGGCCTTTGGCGGCCACACCGGCCCCGCGGCCCCATCGCGGCGCACTACGGAGGCCCCGGGCCCAAATACA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000329363.9 ENST00000401779.5 ENST00000403326.5 ENST00000405135.5 ENST00000428989.3 ENST00000437588.2 ENST00000682240.1 |
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| CDS CCA 72 bp | TCGGTGCCGCGCACGGTCATGCGAGCGGGCACCAGGTaGCCTGGCCCGGGGCCGCACGTCGTCTGCGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SVPRTVMRAGTR*PGPGPHVVCGV Trigger: AACACCGCAGACGACGTGCGGCCCCGGGCCAGGCCACCTGGTGCCCGCTCGCATGACCGTGCGCGGCACCGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000401779.5 |
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| CDS CCA 72 bp | GTCTGTGGCTCCCGAGAGTCCCCCTCCCGCCCTCGGTaGGGTCTCGACGTTCGGACGCGGCGCAGCGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VCGSRESPSRPR*GLDVRTRRSAG Trigger: CCCAGCGCTGCGCCGCGTCCGAACGTCGAGACCCCACCGAGGGCGGGAGGGGGACTCTCGGGAGCCACAGAC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468249.1 |
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| CDS CCA 72 bp | CCCGCTGGGTTCGGAGTTGGGACACGGCCCCAGCCGTaGCTCCACCCCAGGCCTTGCGCCAGGACGCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PAGFGVGTRPQP*LHPRPCARTRR Trigger: TCTGCGCGTCCTGGCGCAAGGCCTGGGGTGGAGCCACGGCTGGGGCCGTGTCCCAACTCCGAACCCAGCGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468249.1 |
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| CDS TCA 72 bp | TGCGTGGGAGCCAGGTCCCGGAGTGAGGAAGGGCGCTaGGCGGCGTGGGCGGCCGTAGATGGAGTAGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: CVGARSRSEEGR*AAWAAVDGVGG Trigger: CCCGCCTACTCCATCTACGGCCGCCCACGCCGCTCAGCGCCCTTCCTCACTCCGGGACCTGGCTCCCACGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405135.5 |
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| CDS TCA 72 bp | GGGGTCCTGACCAGGTCCCGGAGTGAGGAAGGGCGCTaGGCGGCGTGGGCGGCCGTAGATGGAGTAGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GVLTRSRSEEGR*AAWAAVDGVGG Trigger: CCCGCCTACTCCATCTACGGCCGCCCACGCCGCTCAGCGCCCTTCCTCACTCCGGGACCTGGTCAGGACCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468249.1 |
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| CDS GCA 72 bp | GGGACACGGCCCCAGCCGTGGCTCCACCCCAGGCCTTaGGCCAGGACGCGCAGAGAGAGAGAGAGAGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GTRPQPWLHPRP*ARTRREREREA Trigger: CGCCTCTCTCTCTCTCTCTCTGCGCGTCCTGGCGCAAGGCCTGGGGTGGAGCCACGGCTGGGGCCGTGTCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468249.1 |
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| CDS CCA 72 bp | GCAGGGCGTAGCCGGTGTTGGGCGGCAGCTTGTATTTaGGCCCGGGGCCTCCGTAGTGCGCCGCGATGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AGRSRCWAAACI*ARGLRSAPRWG Trigger: GCCCCATCGCGGCGCACTACGGAGGCCCCGGGCCCAAATACAAGCTGCCGCCCAACACCGGCTACGCCCTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000329363.9 ENST00000405135.5 ENST00000428989.3 ENST00000682240.1 |
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| CDS CAA 72 bp | CGTCCGTGTCTGCCTCCCGCTTCCCCGCCTCGCGACTaGAGCCCCGCCCGTACCTGCTTAGGGCGCTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RPCLPPASPPRD*SPARTCLGRCP Trigger: AGGGCAGCGCCCTAAGCAGGTACGGGCGGGGCTCAAGTCGCGAGGCGGGGAAGCGGGAGGCAGACACGGACG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468249.1 |
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| CDS CCA 72 bp | GCACGTCGTCTGCGGTGTTGGGCGGCAGCTTGTATTTaGGCCCGGGGCCTCCGTAGTGCGCCGCGATGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ARRLRCWAAACI*ARGLRSAPRWG Trigger: GCCCCATCGCGGCGCACTACGGAGGCCCCGGGCCCAAATACAAGCTGCCGCCCAACACCGCAGACGACGTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000401779.5 |
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| CDS TCA 72 bp | GAAGTACCTGCCAGGTCCCGGAGTGAGGAAGGGCGCTaGGCGGCGTGGGCGGCCGTAGATGGAGTAGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: EVPARSRSEEGR*AAWAAVDGVGG Trigger: CCCGCCTACTCCATCTACGGCCGCCCACGCCGCTCAGCGCCCTTCCTCACTCCGGGACCTGGCAGGTACTTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000329363.9 ENST00000401779.5 ENST00000428989.3 ENST00000469660.1 ENST00000682240.1 |
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| CDS CCA 72 bp | CGCTTACGGCTCGCAGCACCTGCGGACAGAAGGCGGTaGCCGCGGCCCCTGCACCGCAAATTCTTGGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RLRLAAPADRRR*PRPLHRKFLGS Trigger: GCTCCCCAAGAATTTGCGGTGCAGGGGCCGCGGCCACCGCCTTCTGTCCGCAGGTGCTGCGAGCCGTAAGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000401779.5 ENST00000437588.2 ENST00000682240.1 |
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| CDS CCA 72 bp | CCGGGAAGTACCTGCCTGCGGGGCGGATCAAGGGTGTaGGGGGCTAGAACTGCGTGGGAGCCAGGTCCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: PGSTCLRGGSRV*GARTAWEPGPG Trigger: TCCGGGACCTGGCTCCCACGCAGTTCTAGCCCCCCACACCCTTGATCCGCCCCGCAGGCAGGTACTTCCCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000405135.5 |
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| CDS CCA 72 bp | GGAAGTACCTGCCGGTGTTGGGCGGCAGCTTGTATTTaGGCCCGGGGCCTCCGTAGTGCGCCGCGATGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GSTCRCWAAACI*ARGLRSAPRWG Trigger: GCCCCATCGCGGCGCACTACGGAGGCCCCGGGCCCAAATACAAGCTGCCGCCCAACACCGGCAGGTACTTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000403326.5 |
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| CDS CAA 90 bp | GCGCCAGCAAAACAAACGCGAGCTTCCTTCCCGGCTGTGTGGAGCTaGGGGCCGGGAGCGGATCCAGGGCCATCACCCGGACTCCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: APAKQTRASFPAVWS*GPGADPGPSPGLQA Trigger: CGCCTGGAGTCCGGGTGATGGCCCTGGATCCGCTCCCGGCCCCAAGCTCCACACAGCCGGGAAGGAAGCTCGCGTTTGTTTTGCTGGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437588.2 |
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| CDS CAA 90 bp | GTTCGGAGTTGGGACACGGCCCCAGCCGTGGCTCCACCCCAGGCCTaGCGCCAGGACGCGCAGAGAGAGAGAGAGAGAGGCGGACACGAT | + |
|
Preference number: 6 (lower is better) Translates to: VRSWDTAPAVAPPQA*RQDAQRERERGGHD Trigger: ATCGTGTCCGCCTCTCTCTCTCTCTCTCTGCGCGTCCTGGCGCAAGGCCTGGGGTGGAGCCACGGCTGGGGCCGTGTCCCAACTCCGAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468249.1 |
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| CDS CCA 72 bp | CCCAGTTTCGGGGAGCAATGGTGTGCCGAGGCGCACTaGGGTACGTCGCGTTCCCCGCTCGCTCCGGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PSFGEQWCAEAH*GTSRSPLAPGS Trigger: ACTTCCCGGAGCGAGCGGGGAACGCGACGTACCCCAGTGCGCCTCGGCACACCATTGCTCCCCGAAACTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000329363.9 ENST00000401779.5 ENST00000403326.5 ENST00000405135.5 ENST00000428989.3 ENST00000463472.1 ENST00000468249.1 ENST00000469660.1 ENST00000682240.1 |
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| CDS CCA 72 bp | CCGGGAAGTACCTGCCTGCGGGGCGGATCAAGGGTGTaGGGGGCTAGAACTGCGTGGGAGCCTGGTGGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: PGSTCLRGGSRV*GARTAWEPGGY Trigger: GTACCCACCAGGCTCCCACGCAGTTCTAGCCCCCCACACCCTTGATCCGCCCCGCAGGCAGGTACTTCCCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000463472.1 ENST00000468249.1 |
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| CDS GCA 72 bp | CAGCACCTGCGGACAGAAGGCGGTGGCCGCGGCCCCTaGACCGCAAATTCTTGGGGAGCGCACTTTCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: QHLRTEGGGRGP*TANSWGAHFPT Trigger: AGTGGGAAAGTGCGCTCCCCAAGAATTTGCGGTGCAGGGGCCGCGGCCACCGCCTTCTGTCCGCAGGTGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000401779.5 ENST00000437588.2 ENST00000682240.1 |
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| CDS CCA 72 bp | CCAGGCCACCTGATCCACGTTGTAGGCCGCGGGCCCTaGCTTCCGAGTGTTGTCTTGGGGGAGCGAAGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PGHLIHVVGRGP*LPSVVLGERSP Trigger: CGGACTTCGCTCCCCCAAGACAACACTCGGAAGCCAGGGCCCGCGGCCTACAACGTGGATCAGGTGGCCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000428989.3 ENST00000463472.1 ENST00000469660.1 |
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| CDS CCA 72 bp | AACAAACGCGAGCTTCCTTCCCGGCTGTGTGGAGCTTaGGGCCGGGAGCGGATCCAGGGCCATCACCCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: NKRELPSRLCGA*GRERIQGHHPD Trigger: GTCCGGGTGATGGCCCTGGATCCGCTCCCGGCCCCAAGCTCCACACAGCCGGGAAGGAAGCTCGCGTTTGTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437588.2 |
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| CDS CCA 72 bp | GAAGGCGGTGGCCGCGGCCCCTGCACCGCAAATTCTTaGGGAGCGCACTTTCCCACTACCCTGGGATCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: EGGGRGPCTANS*GAHFPTTLGSA Trigger: CGCTGATCCCAGGGTAGTGGGAAAGTGCGCTCCCCAAGAATTTGCGGTGCAGGGGCCGCGGCCACCGCCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437588.2 ENST00000682240.1 |
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| CDS CCA 72 bp | CTTCCGGTGCTGATCCACGTTGTAGGCCGCGGGCCCTaGCTTCCGAGTGTTGTCTTGGGGGAGCGAAGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: LPVLIHVVGRGP*LPSVVLGERSP Trigger: CGGACTTCGCTCCCCCAAGACAACACTCGGAAGCCAGGGCCCGCGGCCTACAACGTGGATCAGCACCGGAAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000329363.9 ENST00000401779.5 ENST00000403326.5 ENST00000405135.5 ENST00000468249.1 ENST00000682240.1 |
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| CDS CCA 72 bp | CACGATGCGGACTCGCAGACTTTAAGCAAACACGTGTaGGGCCGCTCCCGCCTGGCGGGTCAGTTGTCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: HDADSQTLSKHV*GRSRLAGQLSA Trigger: CGCGGACAACTGACCCGCCAGGCGGGAGCGGCCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCATCGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000401779.5 ENST00000468249.1 |
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| CDS CAA 72 bp | AGAAGGCGGTGGCCGCGGCCCCTGCACCGCAAATTCTaGGGGAGCGCACTTTCCCACTACCCTGGGATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRRWPRPLHRKF*GSALSHYPGIS Trigger: GCTGATCCCAGGGTAGTGGGAAAGTGCGCTCCCCAAGAATTTGCGGTGCAGGGGCCGCGGCCACCGCCTTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000437588.2 ENST00000682240.1 |
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| CDS CCA 72 bp | CCAGCAAAACAAACGCGAGCTTCCTTCCCGGCTGTGTaGAGCTTGGGGCCGGGAGCGGATCCAGGGCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: PAKQTRASFPAV*SLGPGADPGPS Trigger: TGATGGCCCTGGATCCGCTCCCGGCCCCAAGCTCCACACAGCCGGGAAGGAAGCTCGCGTTTGTTTTGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437588.2 |
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| CDS CCA 72 bp | GCTAGAACTGCGTGGGAGCCTGGTGGGTACCCGAGATaGGGTCCTGGGACTAGTGGGGAGTCTGAGCCACGA | + |
|
Preference number: 6 (lower is better) Translates to: ARTAWEPGGYPR*GPGTSGESEPR Trigger: TCGTGGCTCAGACTCCCCACTAGTCCCAGGACCCCATCTCGGGTACCCACCAGGCTCCCACGCAGTTCTAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000463472.1 ENST00000468249.1 |
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| CDS TCA 72 bp | CGTAGATGGAGCAAGTTGGGGCGGAGACTTTGCCGATaGCGCGCGGACCCAAGAGCGAGGGCACCGTATAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRWSKLGRRLCR*RADPRARAPYR Trigger: CCTATACGGTGCCCTCGCTCTTGGGTCCGCGCGTCATCGGCAAAGTCTCCGCCCCAACTTGCTCCATCTACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000329363.9 ENST00000401779.5 ENST00000403326.5 ENST00000405135.5 ENST00000428989.3 ENST00000463472.1 ENST00000468249.1 ENST00000469660.1 ENST00000682240.1 |
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| CDS GCA 72 bp | GGACGCGCAGAGAGAGAGAGAGAGAGGCGGACACGATaGGGACTCGCAGACTTTAAGCAAACACGTGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRAERERERRTR*GLADFKQTRVG Trigger: CCCCACACGTGTTTGCTTAAAGTCTGCGAGTCCGCATCGTGTCCGCCTCTCTCTCTCTCTCTCTGCGCGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468249.1 |
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