RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ODF2L (Homo sapiens)

Ensembl gene IDs: ENSG00000122417

Ensembl transcript IDs: ENST00000294678.6, ENST00000317336.11, ENST00000359242.7, ENST00000370566.7, ENST00000394733.2, ENST00000460698.6, ENST00000462648.5, ENST00000463933.5, ENST00000478286.2, ENST00000479890.5, ENST00000488879.6, ENST00000531412.5

Found 366 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTAGTATGGTGAGAGTTAAGAGCAGAGCAGAGACTCTGGATGTCTaGCACTTACTAGCTGTGCGACCTTGGGCAAGTTACCTAACCTTT +
Preference number: 1 (lower is better)
Translates to: GSMVRVKSRAETLDV*HLLAVRPWASYLTF
Trigger: AAAGGTTAGGTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGCTCTGCTCTTAACTCTCACCATACTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
3UTR TCA 90 bp GGTTCTAGATCCTTGAGGAATCGCCACACTGTCTTCCGCAGTGGTTaGACTAATTTACACTCCCACCAACAGTGTAAAAGCATCCTATTT +
Preference number: 1 (lower is better)
Translates to: GSRSLRNRHTVFRSG*TNLHSHQQCKSILF
Trigger: AAATAGGATGCTTTTACACTGTTGGTGGGAGTGTAAATTAGTTCAACCACTGCGGAAGACAGTGTGGCGATTCCTCAAGGATCTAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR TCA 90 bp GTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTTaGGGAATCGCCACACTGTCTTCCGCAGTGGTTGAACTAATTTAC +
Preference number: 1 (lower is better)
Translates to: VMGLLGQMVFLVLDP*GIATLSSAVVELIY
Trigger: GTAAATTAGTTCAACCACTGCGGAAGACAGTGTGGCGATTCCTCAAGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR CCA 90 bp TGCCACATTTTCTTTATTCAGTCTATCATTGATGGGCATTTGGGTTaGCTCCAAGTCTTTGCTATTGTGAATAGTGCCACAATAAATATA +
Preference number: 1 (lower is better)
Translates to: CHIFFIQSIIDGHLG*LQVFAIVNSATINI
Trigger: TATATTTATTGTGGCACTATTCACAATAGCAAAGACTTGGAGCCAACCCAAATGCCCATCAATGATAGACTGAATAAAGAAAATGTGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR TCA 90 bp CTCTTTACATATTCTTTCAACTTATCGTTCTCGGCTTCCCTTTTATaGATTTGGATCTGTAGTCGTTCATGTACTACTTTTACTGATTGG +
Preference number: 1 (lower is better)
Translates to: LFTYSFNLSFSASLL*IWICSRSCTTFTDW
Trigger: CCAATCAGTAAAAGTAGTACATGAACGACTACAGATCCAAATTCATAAAAGGGAAGCCGAGAACGATAAGTTGAAAGAATATGTAAAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488879.6
3UTR-3UTR CCA 90 bp GCAGAGACTCTGGATGTCTGCCACTTACTAGCTGTGCGACCTTGGGCAAGTTACGGTATACACGTGCCATaGTGGTTTGCTGCACTCATC +
Preference number: 2 (lower is better)
Translates to: AETLDVCHLLAVRPWASYGIHVP*WFAALI
Trigger: GATGAGTGCAGCAAACCACCATGGCACGTGTATACC...GTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
3UTR-3UTR TCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTACAGGCCCTGGTGTGTaGTGTTCCCTGCCCTGTATC +
Preference number: 2 (lower is better)
Translates to: VPWWFAALINPSSTLGISTGPGV*CSLPCI
Trigger: GATACAGGGCAGGGAACATCACACACCAGGGCCTGT...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CCA 90 bp ATTAAGCTGCTGAGGTCATCCACAGATCTGTACATCCATTCTGCACCACCCTATGTAAGCAGGGCACTGTaGGAGACACCAGGGATACAG +
Preference number: 2 (lower is better)
Translates to: IKLLRSSTDLYIHSAPPYVSRAL*ETPGIQ
Trigger: CTGTATCCCTGGTGTCTCCCACAGTGCCCTGCTTAC...ATAGGGTGGTGCAGAATGGATGTACAGATCTGTGGATGACCTCAGCAGCTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
3UTR-3UTR CCA 90 bp GCAGAGACTCTGGATGTCTGCCACTTACTAGCTGTGCGACCTTGGGCAAGTTACGTTCTTTGTAGATTCTaGATATTGGCCCTTTGTCAG +
Preference number: 2 (lower is better)
Translates to: AETLDVCHLLAVRPWASYVLCRF*ILALCQ
Trigger: CTGACAAAGGGCCAATATCCAGAATCTACAAAGAAC...GTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
3UTR-3UTR TCA 90 bp ACAACTGATGGCATCTTAGAGGCTATGTCAAAAATCTGTGTGTTCTTAAGCACATATCTCGGCTCACTGTaGCCTTCGCCTCCCAGGTTC +
Preference number: 2 (lower is better)
Translates to: TTDGILEAMSKICVFLSTYLGSL*PSPPRF
Trigger: GAACCTGGGAGGCGAAGGTCACAGTGAGCCGAGATA...TGTGCTTAAGAACACACAGATTTTTGACATAGCCTCTAAGATGCCATCAGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478286.2
3UTR-3UTR CCA 90 bp GCAGAGACTCTGGATGTCTGCCACTTACTAGCTGTGCGACCTTGGGCAAGTTACCTAATTGGTGTGACATaGTATCTCACTGTAGTTTTG +
Preference number: 2 (lower is better)
Translates to: AETLDVCHLLAVRPWASYLIGVT*YLTVVL
Trigger: CAAAACTACAGTGAGATACCATGTCACACCAATTAG...GTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359242.7
3UTR-3UTR GCA 90 bp GCAGAGACTCTGGATGTCTGCCACTTACTAGCTGTGCGACCTTGGGCAAGTTACCAAACATCAACTGAGTaGCCAGATATTTATATGACT +
Preference number: 2 (lower is better)
Translates to: AETLDVCHLLAVRPWASYQTSTE*PDIYMT
Trigger: AGTCATATAAATATCTGGGCACTCAGTTGATGTTTG...GTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
3UTR-3UTR CCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCTCAGTTTTCTGCATATaGCTAGCCAGTTTTCCCAAC +
Preference number: 2 (lower is better)
Translates to: PWCVMFPALYPCILIVQLSVFCI*LASFPN
Trigger: GTTGGGAAAACTGGCTAGCCATATGCAGAAAACTGA...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTTCATTGATGGGCATTTaGGTTGGCTCCAAGTCTTTG +
Preference number: 2 (lower is better)
Translates to: VPWWFAALINPSSTLGISSLMGI*VGSKSL
Trigger: CAAAGACTTGGAGCCAACCCAAATGCCCATCAATGA...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CCA 90 bp GCAGAGACTCTGGATGTCTGCCACTTACTAGCTGTGCGACCTTGGGCAAGTTACACAAATTCACTTGAATaGTGGCTACAAACATCACAA +
Preference number: 2 (lower is better)
Translates to: AETLDVCHLLAVRPWASYTNSLE*WLQTSQ
Trigger: TTGTGATGTTTGTAGCCACCATTCAAGTGAATTTGT...GTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
3UTR-3UTR GCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCCCAGTTTCAGTTTTCTaGATATGGCTAGCCAGTTTT +
Preference number: 2 (lower is better)
Translates to: PWCVMFPALYPCILIVQLPVSVF*IWLASF
Trigger: AAAACTGGCTAGCCATATGCAGAAAACTGAAACTGG...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR GCA 90 bp ACAACTGATGGCATCTTAGAGGCTATGTCAAAAATCTGTGTGTTCTTAAGCACAACAGGCATGATCCATTaGGCCCGGCCAGGTTTTCAT +
Preference number: 2 (lower is better)
Translates to: TTDGILEAMSKICVFLSTTGMIH*ARPGFH
Trigger: ATGAAAACCTGGCCGGGCGCAATGGATCATGCCTGT...TGTGCTTAAGAACACACAGATTTTTGACATAGCCTCTAAGATGCCATCAGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478286.2
3UTR-3UTR CCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTTGCCTATGTCCTGAATaGTATTGCCTAGGTTTTCCT +
Preference number: 2 (lower is better)
Translates to: VPWWFAALINPSSTLGISCLCPE*YCLGFP
Trigger: AGGAAAACCTAGGCAATACCATTCAGGACATAGGCA...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCGTAGATTCTGGATATTaGCCCTTTGTCAGATGGATA +
Preference number: 2 (lower is better)
Translates to: PWCVMFPALYPCILIVQLVDSGY*PFVRWI
Trigger: TATCCATCTGACAAAGGGCCAATATCCAGAATCTAC...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCGTTCTTTGTAGATTCTaGATATTGGCCCTTTGTCAG +
Preference number: 2 (lower is better)
Translates to: PWCVMFPALYPCILIVQLVLCRF*ILALCQ
Trigger: CTGACAAAGGGCCAATATCCAGAATCTACAAAGAAC...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CCA 90 bp ACAACTGATGGCATCTTAGAGGCTATGTCAAAAATCTGTGTGTTCTTAAGCACAAGCCTTCCAAGTAGCTaGGACAACAGGCACACGCTA +
Preference number: 2 (lower is better)
Translates to: TTDGILEAMSKICVFLSTSLPSS*DNRHTL
Trigger: TAGCGTGTGCCTGTTGTCCCAGCTACTTGGAAGGCT...TGTGCTTAAGAACACACAGATTTTTGACATAGCCTCTAAGATGCCATCAGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478286.2
3UTR-3UTR TCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCATCGACGTTTTGTTCTaGCTAAGTTGTCATGAAACT +
Preference number: 2 (lower is better)
Translates to: PWCVMFPALYPCILIVQLIDVLF*LSCHET
Trigger: AGTTTCATGACAACTTAGTCAGAACAAAACGTCGAT...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTGTAGATTCTGGATATTaGCCCTTTGTCAGATGGATA +
Preference number: 2 (lower is better)
Translates to: VPWWFAALINPSSTLGISVDSGY*PFVRWI
Trigger: TATCCATCTGACAAAGGGCCAATATCCAGAATCTAC...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTGTTCTTTGTAGATTCTaGATATTGGCCCTTTGTCAG +
Preference number: 2 (lower is better)
Translates to: VPWWFAALINPSSTLGISVLCRF*ILALCQ
Trigger: CTGACAAAGGGCCAATATCCAGAATCTACAAAGAAC...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTTGCCTATGTCCTGAATaGTATTGCCTAGGTTTTCCT +
Preference number: 2 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPCLCPE*YCLGFP
Trigger: AGGAAAACCTAGGCAATACCATTCAGGACATAGGCA...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTCCCATTTGTCAATCTTaGCTTTTATTGCCATTACTT +
Preference number: 2 (lower is better)
Translates to: VPWWFAALINPSSTLGISPICQS*LLLPLL
Trigger: AAGTAATGGCAATAAAAGCCAAGATTGACAAATGGG...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTTGGCCCTTTGTCAGATaGATAGATTGCAAAAATTTT +
Preference number: 2 (lower is better)
Translates to: VPWWFAALINPSSTLGISWPFVR*IDCKNF
Trigger: AAAATTTTTGCAATCTATCCATCTGACAAAGGGCCA...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR CAA 90 bp CTGGCCAATGCTGTATACTCTGCAGATTTCTCTTTAAACTTAAGATaGCTGTGCTTAAGACATTCTTCTTGGTTTGCCAGCTTCTTCTCA +
Preference number: 2 (lower is better)
Translates to: LANAVYSADFSLNLR*LCLRHSSWFASFFS
Trigger: TGAGAAGAAGCTGGCAAACCAAGAAGAATGTCTTAAGCACAGCAATCTTAAGTTTAAAGAGAAATCTGCAGAGTATACAGCATTGGCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531412.5
3UTR-3UTR GCA 90 bp TGTCTGGCCAATGCTGTATACTCTGCAGATTTCTCTTTAAACTTAAGATTGCTGACATTCTTCTTGGTTTaGCAGCTTCTTCTCAAGCTC +
Preference number: 2 (lower is better)
Translates to: CLANAVYSADFSLNLRLLTFFLV*QLLLKL
Trigger: GAGCTTGAGAAGAAGCTGGCAAACCAAGAAGAATGT...CAGCAATCTTAAGTTTAAAGAGAAATCTGCAGAGTATACAGCATTGGCCAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531412.5
3UTR CAA 90 bp TGTATGTGCCACATTTTCTTTATTCAGTCTATCATTGATGGGCATTaGGGTTGGCTCCAAGTCTTTGCTATTGTGAATAGTGCCACAATA +
Preference number: 2 (lower is better)
Translates to: CMCHIFFIQSIIDGH*GWLQVFAIVNSATI
Trigger: TATTGTGGCACTATTCACAATAGCAAAGACTTGGAGCCAACCCAAATGCCCATCAATGATAGACTGAATAAAGAAAATGTGGCACATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR TCA 90 bp AAACATCTTAAAGAGATATTTCTGTTCATAGGCTGGAACTGTGTAGTTCACAACGTGTTCAATGACACCTaGTACCTTCTGAAACTGAGC +
Preference number: 2 (lower is better)
Translates to: KHLKEIFLFIGWNCVVHNVFNDT*YLLKLS
Trigger: GCTCAGTTTCAGAAGGTATCAGGTGTCATTGAACAC...GTTGTGAACTACACAGTTCCAGCCTATGAACAGAAATATCTCTTTAAGATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
3UTR-3UTR TCA 90 bp GGAAGTAAGCTTTTCAATAGCTCCTGTAAAATGGTCAAGCCTTTGTTTGTAAACTCGGCTTCCCTTTTATaGATTTGGATCTGTAGTCGT +
Preference number: 2 (lower is better)
Translates to: GSKLFNSSCKMVKPLFVNSASLL*IWICSR
Trigger: ACGACTACAGATCCAAATTCATAAAAGGGAAGCCGA...GTTTACAAACAAAGGCTTGACCATTTTACAGGAGCTATTGAAAAGCTTACTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488879.6
3UTR-3UTR GCA 90 bp TGCCTTTTCACTCTGAAACAAACAAGAAAGTTCTTGGATATGGGCCTCCTTTTCGATTTTCTAGCAACATaGTGGATAAATTGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: CLFTLKQTRKFLDMGLLFDFLAT*WINCLL
Trigger: CAGGAGACAATTTATCCAGCATGTTGCTAGAAAATC...GAAAAGGAGGCCCATATCCAAGAACTTTCTTGTTTGTTTCAGAGTGAAAAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488879.6
3UTR-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTCTAATTGGTGTGACATaGTATCTCACTGTAGTTTTG +
Preference number: 2 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPLIGVT*YLTVVL
Trigger: CAAAACTACAGTGAGATACCATGTCACACCAATTAG...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CCA 90 bp ACAACTGATGGCATCTTAGAGGCTATGTCAAAAATCTGTGTGTTCTTAAGCACAAATTCAACCAGAAGCTaGACTAAGCTATCCATACTG +
Preference number: 2 (lower is better)
Translates to: TTDGILEAMSKICVFLSTNSTRS*TKLSIL
Trigger: CAGTATGGATAGCTTAGTCCAGCTTCTGGTTGAATT...TGTGCTTAAGAACACACAGATTTTTGACATAGCCTCTAAGATGCCATCAGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478286.2
3UTR CAA 90 bp ACAGTGGGAAAACGGCTCTGTACACAGAACTTTAATGTTGCAGACTaGAATTTAAATGCCAACTTTAAACAAGTTTCATACCACAGCCAT +
Preference number: 2 (lower is better)
Translates to: TVGKRLCTQNFNVAD*NLNANFKQVSYHSH
Trigger: ATGGCTGTGGTATGAAACTTGTTTAAAGTTGGCATTTAAATTCAAGTCTGCAACATTAAAGTTCTGTGTACAGAGCCGTTTTCCCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359242.7
3UTR-3UTR GCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTTCTGTTCATATTCTTTaGACACTTTTTGATGGGGTT +
Preference number: 2 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPSVHIL*TLFDGV
Trigger: AACCCCATCAAAAAGTGTGCAAAGAATATGAACAGA...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTTATTTCCTTAAGCAGTaGTTTGTAGTTCTCCTTGAA +
Preference number: 2 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPYFLKQ*FVVLLE
Trigger: TTCAAGGAGAACTACAAACCACTGCTTAAGGAAATA...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CCA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGTATTTCCTTAAGCAGTaGTTTGTAGTTCTCCTTGAA +
Preference number: 2 (lower is better)
Translates to: PISCFSQVCQTADGCRCVYFLKQ*FVVLLE
Trigger: TTCAAGGAGAACTACAAACCACTGCTTAAGGAAATA...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTTCAGTTTTCTGCATATaGCTAGCCAGTTTTCCCAAC +
Preference number: 2 (lower is better)
Translates to: CRFWILALCQMDRLQKFSSVFCI*LASFPN
Trigger: GTTGGGAAAACTGGCTAGCCATATGCAGAAAACTGA...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTCCCATTTGTCAATCTTaGCTTTTATTGCCATTACTT +
Preference number: 2 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPPICQS*LLLPLL
Trigger: AAGTAATGGCAATAAAAGCCAAGATTGACAAATGGG...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTTGGCCCTTTGTCAGATaGATAGATTGCAAAAATTTT +
Preference number: 2 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPWPFVR*IDCKNF
Trigger: AAAATTTTTGCAATCTATCCATCTGACAAAGGGCCA...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR GCA 90 bp AAACATCTTAAAGAGATATTTCTGTTCATAGGCTGGAACTGTGTAGTTCACAACCCAGTTTCAGTTTTCTaGATATGGCTAGCCAGTTTT +
Preference number: 2 (lower is better)
Translates to: KHLKEIFLFIGWNCVVHNPVSVF*IWLASF
Trigger: AAAACTGGCTAGCCATATGCAGAAAACTGAAACTGG...GTTGTGAACTACACAGTTCCAGCCTATGAACAGAAATATCTCTTTAAGATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359242.7
3UTR-3UTR CCA 90 bp AAACATCTTAAAGAGATATTTCTGTTCATAGGCTGGAACTGTGTAGTTCACAACGATCACCATTCTAATTaGTGTGACATGGTATCTCAC +
Preference number: 2 (lower is better)
Translates to: KHLKEIFLFIGWNCVVHNDHHSN*CDMVSH
Trigger: GTGAGATACCATGTCACACCAATTAGAATGGTGATC...GTTGTGAACTACACAGTTCCAGCCTATGAACAGAAATATCTCTTTAAGATGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
3UTR-3UTR CCA 90 bp CAGTTGTCTGGCCAATGCTGTATACTCTGCAGATTTCTCTTTAAACTTAAGATTTTAAGACATTCTTCTTaGTTTGCCAGCTTCTTCTCA +
Preference number: 2 (lower is better)
Translates to: QLSGQCCILCRFLFKLKILRHSS*FASFFS
Trigger: TGAGAAGAAGCTGGCAAACCAAGAAGAATGTCTTAA...AATCTTAAGTTTAAAGAGAAATCTGCAGAGTATACAGCATTGGCCAGACAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531412.5
3UTR-3UTR TCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTATCGACGTTTTGTTCTaGCTAAGTTGTCATGAAACT +
Preference number: 2 (lower is better)
Translates to: CRFWILALCQMDRLQKFSIDVLF*LSCHET
Trigger: AGTTTCATGACAACTTAGTCAGAACAAAACGTCGAT...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR TCA 90 bp AAACATCTTAAAGAGATATTTCTGTTCATAGGCTGGAACTGTGTAGTTCACAACATCGACGTTTTGTTCTaGCTAAGTTGTCATGAAACT +
Preference number: 2 (lower is better)
Translates to: KHLKEIFLFIGWNCVVHNIDVLF*LSCHET
Trigger: AGTTTCATGACAACTTAGTCAGAACAAAACGTCGAT...GTTGTGAACTACACAGTTCCAGCCTATGAACAGAAATATCTCTTTAAGATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359242.7
3UTR-3UTR TCA 90 bp AAACATCTTAAAGAGATATTTCTGTTCATAGGCTGGAACTGTGTAGTTCACAACTACTACAAATTCACTTaGATGGTGGCTACAAACATC +
Preference number: 2 (lower is better)
Translates to: KHLKEIFLFIGWNCVVHNYYKFT*MVATNI
Trigger: GATGTTTGTAGCCACCATTCAAGTGAATTTGTAGTA...GTTGTGAACTACACAGTTCCAGCCTATGAACAGAAATATCTCTTTAAGATGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
3UTR-3UTR GCA 90 bp GGAAGTAAGCTTTTCAATAGCTCCTGTAAAATGGTCAAGCCTTTGTTTGTAAACTTGGGAAAAACGGTTTaGTTTCAAAGTATTTGCCTT +
Preference number: 2 (lower is better)
Translates to: GSKLFNSSCKMVKPLFVNLGKTV*FQSICL
Trigger: AAGGCAAATACTTTGAAAGCAAACCGTTTTTCCCAA...GTTTACAAACAAAGGCTTGACCATTTTACAGGAGCTATTGAAAAGCTTACTTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488879.6
3UTR-3UTR CCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTTATTTCCTTAAGCAGTaGTTTGTAGTTCTCCTTGAA +
Preference number: 2 (lower is better)
Translates to: CRFWILALCQMDRLQKFSYFLKQ*FVVLLE
Trigger: TTCAAGGAGAACTACAAACCACTGCTTAAGGAAATA...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR TCA 72 bp TTCAGGCTTCCCGAGGGGTGCCTTGGATTAAGCTGCTaGGGTCATCCACAGATCTGTACATCCATTCTGCAC +
Preference number: 3 (lower is better)
Translates to: FRLPEGCLGLSC*GHPQICTSILH
Trigger: GTGCAGAATGGATGTACAGATCTGTGGATGACCTCAGCAGCTTAATCCAAGGCACCCCTCGGGAAGCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359242.7
3UTR GCA 72 bp GTGAGAGTTAAGAGCAGAGCAGAGACTCTGGATGTCTaGCACTTACTAGCTGTGCGACCTTGGGCAAGTTAC +
Preference number: 3 (lower is better)
Translates to: VRVKSRAETLDV*HLLAVRPWASY
Trigger: GTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGCTCTGCTCTTAACTCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
3UTR-3UTR CAA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTTCTGGTTCTAGATCCTaGAGGAATCGCCACACTGTC +
Preference number: 3 (lower is better)
Translates to: VPWWFAALINPSSTLGISSGSRS*RNRHTV
Trigger: GACAGTGTGGCGATTCCTCAAGGATCTAGAACCAGA...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR TCA 72 bp TCCTTGAGGAATCGCCACACTGTCTTCCGCAGTGGTTaGACTAATTTACACTCCCACCAACAGTGTAAAAGC +
Preference number: 3 (lower is better)
Translates to: SLRNRHTVFRSG*TNLHSHQQCKS
Trigger: GCTTTTACACTGTTGGTGGGAGTGTAAATTAGTTCAACCACTGCGGAAGACAGTGTGGCGATTCCTCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR TCA 72 bp TTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTTaGGGAATCGCCACACTGTCTTCCGCAGTGGTTGAA +
Preference number: 3 (lower is better)
Translates to: LLGQMVFLVLDP*GIATLSSAVVE
Trigger: TTCAACCACTGCGGAAGACAGTGTGGCGATTCCTCAAGGATCTAGAACCAGAAATACCATTTGACCCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR GCA 72 bp GCTGCTGAGGTCATCCACAGATCTGTACATCCATTCTaGACCACCCTATTAGGGTACTTGGACAGAAAATAC +
Preference number: 3 (lower is better)
Translates to: AAEVIHRSVHPF*TTLLGYLDRKY
Trigger: GTATTTTCTGTCCAAGTACCCTAATAGGGTGGTGCAGAATGGATGTACAGATCTGTGGATGACCTCAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359242.7
3UTR-3UTR CAA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTATCATTGATGGGCATTaGGGTTGGCTCCAAGTCTTT +
Preference number: 3 (lower is better)
Translates to: VPWWFAALINPSSTLGISIIDGH*GWLQVF
Trigger: AAAGACTTGGAGCCAACCCAAATGCCCATCAATGAT...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CAA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCTTATTCAGTCTATCATaGATGGGCATTTGGGTTGGC +
Preference number: 3 (lower is better)
Translates to: PWCVMFPALYPCILIVQLLFSLS*MGIWVG
Trigger: GCCAACCCAAATGCCCATCAATGATAGACTGAATAA...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CAA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTGTCTATATATCTGTTTaGGCACCAGTACCATGCTAT +
Preference number: 3 (lower is better)
Translates to: VPWWFAALINPSSTLGISVYISV*APVPCY
Trigger: ATAGCATGGTACTGGTGCCAAAACAGATATATAGAC...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CAA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCCTCTGTTCTGTTCCATaGGTCTATATATCTGTTTTG +
Preference number: 3 (lower is better)
Translates to: PWCVMFPALYPCILIVQLLCSVP*VYISVL
Trigger: CAAAACAGATATATAGACCAATGGAACAGAACAGAG...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CAA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCTCCCATTTGTCAATCTaGGCTTTTATTGCCATTACT +
Preference number: 3 (lower is better)
Translates to: PWCVMFPALYPCILIVQLSHLSI*AFIAIT
Trigger: AGTAATGGCAATAAAAGCCAAGATTGACAAATGGGA...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CAA 90 bp AAACATCTTAAAGAGATATTTCTGTTCATAGGCTGGAACTGTGTAGTTCACAACACGTGCCATGGTGGTTaGCTGCACTCATCAACCCGT +
Preference number: 3 (lower is better)
Translates to: KHLKEIFLFIGWNCVVHNTCHGG*LHSSTR
Trigger: ACGGGTTGATGAGTGCAGCAAACCACCATGGCACGT...GTTGTGAACTACACAGTTCCAGCCTATGAACAGAAATATCTCTTTAAGATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
3UTR-3UTR CAA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTTCCCATTTGTCAATCTaGGCTTTTATTGCCATTACT +
Preference number: 3 (lower is better)
Translates to: VPWWFAALINPSSTLGISSHLSI*AFIAIT
Trigger: AGTAATGGCAATAAAAGCCAAGATTGACAAATGGGA...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CAA 90 bp AGCTTCCAGTTGTCTGGCCAATGCTGTATACTCTGCAGATTTCTCTTTAAACTTGACATTCTTCTTGGTTaGCCAGCTTCTTCTCAAGCT +
Preference number: 3 (lower is better)
Translates to: SFQLSGQCCILCRFLFKLDILLG*PASSQA
Trigger: AGCTTGAGAAGAAGCTGGCAAACCAAGAAGAATGTC...AAGTTTAAAGAGAAATCTGCAGAGTATACAGCATTGGCCAGACAACTGGAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531412.5
3UTR-3UTR CAA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGTCTTTTTGCTTAGGATaGTCTTGGTTATGTGAGCTC +
Preference number: 3 (lower is better)
Translates to: PISCFSQVCQTADGCRCVSFCLG*SWLCEL
Trigger: GAGCTCACATAACCAAGACAATCCTAAGCAAAAAGA...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CAA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTGTGATGCCTACAGCTTaGTTCTTTTTGCTTAGGATT +
Preference number: 3 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPVMPTA*FFLLRI
Trigger: AATCCTAAGCAAAAAGAACAAAGCTGTAGGCATCAC...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR CCA 72 bp TTCTTTATTCAGTCTATCATTGATGGGCATTTGGGTTaGCTCCAAGTCTTTGCTATTGTGAATAGTGCCACA +
Preference number: 3 (lower is better)
Translates to: FFIQSIIDGHLG*LQVFAIVNSAT
Trigger: TGTGGCACTATTCACAATAGCAAAGACTTGGAGCCAACCCAAATGCCCATCAATGATAGACTGAATAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CAA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTGTGATGCCTACAGCTTaGTTCTTTTTGCTTAGGATT +
Preference number: 3 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSVMPTA*FFLLRI
Trigger: AATCCTAAGCAAAAAGAACAAAGCTGTAGGCATCAC...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CAA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTGTCTATATATCTGTTTaGGCACCAGTACCATGCTAT +
Preference number: 3 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSVYISV*APVPCY
Trigger: ATAGCATGGTACTGGTGCCAAAACAGATATATAGAC...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CAA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTCTCTGTTCTGTTCCATaGGTCTATATATCTGTTTTG +
Preference number: 3 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPLCSVP*VYISVL
Trigger: CAAAACAGATATATAGACCAATGGAACAGAACAGAG...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CAA 90 bp GGAAGTAAGCTTTTCAATAGCTCCTGTAAAATGGTCAAGCCTTTGTTTGTAAACCAAACAAGAAAGTTCTaGGATATGGGCCTCCTTTTC +
Preference number: 3 (lower is better)
Translates to: GSKLFNSSCKMVKPLFVNQTRKF*DMGLLF
Trigger: GAAAAGGAGGCCCATATCCAAGAACTTTCTTGTTTG...GTTTACAAACAAAGGCTTGACCATTTTACAGGAGCTATTGAAAAGCTTACTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488879.6
3UTR-3UTR CAA 90 bp CAGTTGTCTGGCCAATGCTGTATACTCTGCAGATTTCTCTTTAAACTTAAGATTCTTAAGACATTCTTCTaGGTTTGCCAGCTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: QLSGQCCILCRFLFKLKILKTFF*VCQLLL
Trigger: GAGAAGAAGCTGGCAAACCAAGAAGAATGTCTTAAG...AATCTTAAGTTTAAAGAGAAATCTGCAGAGTATACAGCATTGGCCAGACAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531412.5
3UTR TCA 72 bp TGTATCCATGTATTCTCATTGTTCAACTCCCACTTATaGGTGAGAACATGCGGTGTTTGGTTTTCTGTTCTT +
Preference number: 3 (lower is better)
Translates to: CIHVFSLFNSHL*VRTCGVWFSVL
Trigger: AAGAACAGAAAACCAAACACCGCATGTTCTCACTCATAAGTGGGAGTTGAACAATGAGAATACATGGATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR TCA 72 bp ATCCACAAACATCAACTGAGTGCCCAGATATTTATATaGCTAAGATACATTTCGGCCCTTAAGGAGCTTACA +
Preference number: 3 (lower is better)
Translates to: IHKHQLSAQIFI*LRYISALKELT
Trigger: TGTAAGCTCCTTAAGGGCCGAAATGTATCTTAGTCATATAAATATCTGGGCACTCAGTTGATGTTTGTGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
3UTR TCA 72 bp ATCTTTATTTATGAAATGGATACAGAGGTAGTATGGTaGGAGTTAAGAGCAGAGCAGAGACTCTGGATGTCT +
Preference number: 3 (lower is better)
Translates to: IFIYEMDTEVVW*ELRAEQRLWMS
Trigger: AGACATCCAGAGTCTCTGCTCTGCTCTTAACTCTCACCATACTACCTCTGTATCCATTTCATAAATAAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
3UTR-3UTR CAA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTCTCTGTTCTGTTCCATaGGTCTATATATCTGTTTTG +
Preference number: 3 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSLCSVP*VYISVL
Trigger: CAAAACAGATATATAGACCAATGGAACAGAACAGAG...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR GCA 72 bp TACTCTGCAGATTTCTCTTTAAACTTAAGATTGCTGTaGTTAAGACATTCTTCTTGGTTTGCCAGCTTCTTC +
Preference number: 3 (lower is better)
Translates to: YSADFSLNLRLL*LRHSSWFASFF
Trigger: GAAGAAGCTGGCAAACCAAGAAGAATGTCTTAAGCACAGCAATCTTAAGTTTAAAGAGAAATCTGCAGAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531412.5
3UTR-3UTR CAA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTTCTTTTTGCTTAGGATaGTCTTGGTTATGTGAGCTC +
Preference number: 3 (lower is better)
Translates to: CRFWILALCQMDRLQKFSSFCLG*SWLCEL
Trigger: GAGCTCACATAACCAAGACAATCCTAAGCAAAAAGA...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CAA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTGTGATGCCTACAGCTTaGTTCTTTTTGCTTAGGATT +
Preference number: 3 (lower is better)
Translates to: CRFWILALCQMDRLQKFSVMPTA*FFLLRI
Trigger: AATCCTAAGCAAAAAGAACAAAGCTGTAGGCATCAC...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR-3UTR CAA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTTCCCATTTGTCAATCTaGGCTTTTATTGCCATTACT +
Preference number: 3 (lower is better)
Translates to: CRFWILALCQMDRLQKFSSHLSI*AFIAIT
Trigger: AGTAATGGCAATAAAAGCCAAGATTGACAAATGGGA...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR TCA 72 bp GCCTGTGCTAAATTAAAGGTGATCGACGTTTTGTTCTaGCTAAGTTGTCATGAAACTTTTGATGGCAATAAA +
Preference number: 3 (lower is better)
Translates to: ACAKLKVIDVLF*LSCHETFDGNK
Trigger: TTTATTGCCATCAAAAGTTTCATGACAACTTAGTCAGAACAAAACGTCGATCACCTTTAATTTAGCACAGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR CCA 72 bp GGCTATGTCAAAAATCTGTGTGTTCTTAAGCACAACTaGCTTAAAGTAATGAGCCTAAGAACATTCTATCTA +
Preference number: 3 (lower is better)
Translates to: GYVKNLCVLKHN*LKVMSLRTFYL
Trigger: TAGATAGAATGTTCTTAGGCTCATTACTTTAAGCCAGTTGTGCTTAAGAACACACAGATTTTTGACATAGCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478286.2
3UTR TCA 72 bp TATTCTTTCAACTTATCGTTCTCGGCTTCCCTTTTATaGATTTGGATCTGTAGTCGTTCATGTACTACTTTT +
Preference number: 3 (lower is better)
Translates to: YSFNLSFSASLL*IWICSRSCTTF
Trigger: AAAAGTAGTACATGAACGACTACAGATCCAAATTCATAAAAGGGAAGCCGAGAACGATAAGTTGAAAGAATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR TCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTGTCCGCACGTCGTCGTaGCGACAGCCCGCCGTCGCC +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISVRTSS*RQPAVA
Trigger: GGCGACGGCGGGCTGTCGTCACGACGACGTGCGGAC...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp ATTAAGCTGCTGAGGTCATCCACAGATCTGTACATCCATTCTGCACCACCCTATGTCCGCACGTCGTCGTaGCGACAGCCCGCCGTCGCC +
Preference number: 4 (lower is better)
Translates to: IKLLRSSTDLYIHSAPPYVRTSS*RQPAVA
Trigger: GGCGACGGCGGGCTGTCGTCACGACGACGTGCGGAC...ATAGGGTGGTGCAGAATGGATGTACAGATCTGTGGATGACCTCAGCAGCTTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR TCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTGTCCGCACGTCGTCGTaGCGACAGCCCGCCGTCGCC +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPVRTSS*RQPAVA
Trigger: GGCGACGGCGGGCTGTCGTCACGACGACGTGCGGAC...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCCAGAGGCGCCACGGCTaGTGCAATGGAAACCGTGGC +
Preference number: 4 (lower is better)
Translates to: PWCVMFPALYPCILIVQLQRRHG*CNGNRG
Trigger: GCCACGGTTTCCATTGCAGCAGCCGTGGCGCCTCTG...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp GCAGAGACTCTGGATGTCTGCCACTTACTAGCTGTGCGACCTTGGGCAAGTTACCCACGGCTGCTGCAATaGAAACCGTGGCAATCCTTC +
Preference number: 4 (lower is better)
Translates to: AETLDVCHLLAVRPWASYPRLLQ*KPWQSF
Trigger: GAAGGATTGCCACGGTTTCCATTGCAGCAGCCGTGG...GTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR TCA 90 bp ACAACTGATGGCATCTTAGAGGCTATGTCAAAAATCTGTGTGTTCTTAAGCACAGTCCGCACGTCGTCGTaGCGACAGCCCGCCGTCGCC +
Preference number: 4 (lower is better)
Translates to: TTDGILEAMSKICVFLSTVRTSS*RQPAVA
Trigger: GGCGACGGCGGGCTGTCGTCACGACGACGTGCGGAC...TGTGCTTAAGAACACACAGATTTTTGACATAGCCTCTAAGATGCCATCAGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478286.2
CDS-3UTR TCA 90 bp TCTGTAGTCGTTCATGTACTACTTTTACTGATTGGGAAAAACGGTTTGCTTTCAGTCCGCACGTCGTCGTaGCGACAGCCCGCCGTCGCC +
Preference number: 4 (lower is better)
Translates to: SVVVHVLLLLIGKNGLLSVRTSS*RQPAVA
Trigger: GGCGACGGCGGGCTGTCGTCACGACGACGTGCGGAC...TGAAAGCAAACCGTTTTTCCCAATCAGTAAAAGTAGTACATGAACGACTACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR TCA 90 bp GCAGAGACTCTGGATGTCTGCCACTTACTAGCTGTGCGACCTTGGGCAAGTTACTCTAACTCCTTCAGATaGGACTCCATCTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: AETLDVCHLLAVRPWASYSNSFR*DSIWPL
Trigger: GAGAGGCCAGATGGAGTCTCATCTGAAGGAGTTAGA...GTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR TCA 90 bp GCAGAGACTCTGGATGTCTGCCACTTACTAGCTGTGCGACCTTGGGCAAGTTACGGATACAGACGACTATaGGACATGCTTTCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: AETLDVCHLLAVRPWASYGYRRL*DMLSEC
Trigger: GCACTCTGAAAGCATGTCTCATAGTCGTCTGTATCC...GTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR GCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCGGTGTGTTCCTGGTCTaGACACTTCCCCTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PWCVMFPALYPCILIVQLGVFLV*TLPLAA
Trigger: TGCTGCAAGGGGAAGTGTGCAGACCAGGAACACACC...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp GCAGAGACTCTGGATGTCTGCCACTTACTAGCTGTGCGACCTTGGGCAAGTTACTTTGTCAGAAGATTGTaGTTTCCATCAACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: AETLDVCHLLAVRPWASYFVRRL*FPSTWP
Trigger: GGGCCAGGTTGATGGAAATCACAATCTTCTGACAAA...GTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR GCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTCAGAGGCGCCACGGCTaGTGCAATGGAAACCGTGGC +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPQRRHG*CNGNRG
Trigger: GCCACGGTTTCCATTGCAGCAGCCGTGGCGCCTCTG...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTCTGCACACTTCCCCTTaGAGCACTGCAGACTCTCCT +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISLHTSP*STADSP
Trigger: AGGAGAGTCTGCAGTGCTGCAAGGGGAAGTGTGCAG...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp GCAGAGACTCTGGATGTCTGCCACTTACTAGCTGTGCGACCTTGGGCAAGTTACGATGGGCATTTGGGTTaGCTCCAAGTCTTTGCTATT +
Preference number: 4 (lower is better)
Translates to: AETLDVCHLLAVRPWASYDGHLG*LQVFAI
Trigger: AATAGCAAAGACTTGGAGCCAACCCAAATGCCCATC...GTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTGTAAGCAGGGCACTGTaGGAGACACCAGGGATACAG +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISVSRAL*ETPGIQ
Trigger: CTGTATCCCTGGTGTCTCCCACAGTGCCCTGCTTAC...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCCCCATGAGTTGGCCATaGAAAGGGTGGGATAAGCTG +
Preference number: 4 (lower is better)
Translates to: PWCVMFPALYPCILIVQLPMSWP*KGWDKL
Trigger: CAGCTTATCCCACCCTTTCCATGGCCAACTCATGGG...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR TCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCTTCAGGCAGCTGAGATaGCTTTCACTGGTACACCGT +
Preference number: 4 (lower is better)
Translates to: PWCVMFPALYPCILIVQLFRQLR*LSLVHR
Trigger: ACGGTGTACCAGTGAAAGTCATCTCAGCTGCCTGAA...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp ACAACTGATGGCATCTTAGAGGCTATGTCAAAAATCTGTGTGTTCTTAAGCACACAGAGGCGCCACGGCTaGTGCAATGGAAACCGTGGC +
Preference number: 4 (lower is better)
Translates to: TTDGILEAMSKICVFLSTQRRHG*CNGNRG
Trigger: GCCACGGTTTCCATTGCAGCAGCCGTGGCGCCTCTG...TGTGCTTAAGAACACACAGATTTTTGACATAGCCTCTAAGATGCCATCAGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478286.2
CDS-3UTR CCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCGGTATACACGTGCCATaGTGGTTTGCTGCACTCATC +
Preference number: 4 (lower is better)
Translates to: PWCVMFPALYPCILIVQLGIHVP*WFAALI
Trigger: GATGAGTGCAGCAAACCACCATGGCACGTGTATACC...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTTCTAACTCCTTCAGATaGGACTCCATCTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISSNSFR*DSIWPL
Trigger: GAGAGGCCAGATGGAGTCTCATCTGAAGGAGTTAGA...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTACAGGCCCTGGTGTGTaGTGTTCCCTGCCCTGTATC +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPTGPGV*CSLPCI
Trigger: GATACAGGGCAGGGAACATCACACACCAGGGCCTGT...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp CCCTTTTATGAATTTGGATCTGTAGTCGTTCATGTACTACTTTTACTGATTGGGCAGAGGCGCCACGGCTaGTGCAATGGAAACCGTGGC +
Preference number: 4 (lower is better)
Translates to: PFYEFGSVVVHVLLLLIGQRRHG*CNGNRG
Trigger: GCCACGGTTTCCATTGCAGCAGCCGTGGCGCCTCTG...CCCAATCAGTAAAAGTAGTACATGAACGACTACAGATCCAAATTCATAAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR GCA 90 bp GCAGAGACTCTGGATGTCTGCCACTTACTAGCTGTGCGACCTTGGGCAAGTTACCGCTTCCTTAAGTGTTaGTTCCAATTCAGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: AETLDVCHLLAVRPWASYRFLKC*FQFSLF
Trigger: GAAAAGACTGAATTGGAAGCAACACTTAAGGAAGCG...GTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTCTAATGGTGTGTTCCTaGTCTGCACACTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISLMVCS*SAHFPL
Trigger: CAAGGGGAAGTGTGCAGACCAGGAACACACCATTAG...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCATACACGTGCCATGGTaGTTTGCTGCACTCATCAAC +
Preference number: 4 (lower is better)
Translates to: PWCVMFPALYPCILIVQLIHVPW*FAALIN
Trigger: GTTGATGAGTGCAGCAAACCACCATGGCACGTGTAT...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp GCAGAGACTCTGGATGTCTGCCACTTACTAGCTGTGCGACCTTGGGCAAGTTACTTTCTGTTCATAGGCTaGAACTGTGTAGTTCACAAC +
Preference number: 4 (lower is better)
Translates to: AETLDVCHLLAVRPWASYFLFIG*NCVVHN
Trigger: GTTGTGAACTACACAGTTCCAGCCTATGAACAGAAA...GTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR GCA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTAGGCGCCACGGCTGCTaGAATGGAAACCGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSRRHGC*NGNRGN
Trigger: ATTGCCACGGTTTCCATTGCAGCAGCCGTGGCGCCT...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp ACAACTGATGGCATCTTAGAGGCTATGTCAAAAATCTGTGTGTTCTTAAGCACAAGGCGCCACGGCTGCTaGAATGGAAACCGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: TTDGILEAMSKICVFLSTRRHGC*NGNRGN
Trigger: ATTGCCACGGTTTCCATTGCAGCAGCCGTGGCGCCT...TGTGCTTAAGAACACACAGATTTTTGACATAGCCTCTAAGATGCCATCAGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478286.2
CDS-3UTR GCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTCAGAGGCGCCACGGCTaGTGCAATGGAAACCGTGGC +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSQRRHG*CNGNRG
Trigger: GCCACGGTTTCCATTGCAGCAGCCGTGGCGCCTCTG...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTCTGCACACTTCCCCTTaGAGCACTGCAGACTCTCCT +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPLHTSP*STADSP
Trigger: AGGAGAGTCTGCAGTGCTGCAAGGGGAAGTGTGCAG...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGGTGTGTTCCTGGTCTaGACACTTCCCCTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PISCFSQVCQTADGCRCVGVFLV*TLPLAA
Trigger: TGCTGCAAGGGGAAGTGTGCAGACCAGGAACACACC...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTCCACGGCTGCTGCAATaGAAACCGTGGCAATCCTTC +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPPRLLQ*KPWQSF
Trigger: GAAGGATTGCCACGGTTTCCATTGCAGCAGCCGTGG...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTAACAATGAGCTAGGCTaGGCAGTACAAAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISNNELG*AVQSHR
Trigger: CCTGTGACTTTGTACTGCCCAGCCTAGCTCATTGTT...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCCCTTGGCACACACAGTaGGAGATTATAGCAAACAAG +
Preference number: 4 (lower is better)
Translates to: PWCVMFPALYPCILIVQLPWHTQ*EIIANK
Trigger: CTTGTTTGCTATAATCTCCCACTGTGTGTGCCAAGG...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTGCGCTGCTGCTACAGTaGGAAAACGGCTCTGTACAC +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPALLLQ*ENGSVH
Trigger: GTGTACAGAGCCGTTTTCCCACTGTAGCAGCAGCGC...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR TCA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGCCTGCTTCAGGCAGCTaGGATGACTTTCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: PISCFSQVCQTADGCRCVPASGS*DDFHWY
Trigger: GTACCAGTGAAAGTCATCTCAGCTGCCTGAAGCAGG...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTAGCAATTCTACAGAATaGGTTACCAACTCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISSNSTE*VTNSAS
Trigger: GGAAGCGGAGTTGGTAACTCATTCTGTAGAATTGCT...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTCCATCAACCTGGCCCTaGAGCTCCCTAATGGTGTGT +
Preference number: 4 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSPSTWP*SSLMVC
Trigger: ACACACCATTAGGGAGCTTCAGGGCCAGGTTGATGG...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTTGGCAATCCTTCTTGTaGTCTGAGTCGGCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPWQSFL*SESARR
Trigger: CCTCCTAGCCGACTCAGAGCACAAGAAGGATTGCCA...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp GCAGAGACTCTGGATGTCTGCCACTTACTAGCTGTGCGACCTTGGGCAAGTTACTTGGGAAAAACGGTTTaGTTTCAAAGTATTTGCCTT +
Preference number: 4 (lower is better)
Translates to: AETLDVCHLLAVRPWASYLGKTV*FQSICL
Trigger: AAGGCAAATACTTTGAAAGCAAACCGTTTTTCCCAA...GTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR GCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCCAGTTGTCTGGCCAATaGTGTATACTCTGCAGATTT +
Preference number: 4 (lower is better)
Translates to: PWCVMFPALYPCILIVQLQLSGQ*CILCRF
Trigger: AAATCTGCAGAGTATACAGCATTGGCCAGACAACTG...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp ACAACTGATGGCATCTTAGAGGCTATGTCAAAAATCTGTGTGTTCTTAAGCACACCACGGCTGCTGCAATaGAAACCGTGGCAATCCTTC +
Preference number: 4 (lower is better)
Translates to: TTDGILEAMSKICVFLSTPRLLQ*KPWQSF
Trigger: GAAGGATTGCCACGGTTTCCATTGCAGCAGCCGTGG...TGTGCTTAAGAACACACAGATTTTTGACATAGCCTCTAAGATGCCATCAGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478286.2
CDS-3UTR CCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCATTGCAGGTTCCACTTaGCTATCTTGGTTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: PWCVMFPALYPCILIVQLIAGST*LSWFLS
Trigger: GCTTAGAAACCAAGATAGCCAAGTGGAACCTGCAAT...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp GCAGAGACTCTGGATGTCTGCCACTTACTAGCTGTGCGACCTTGGGCAAGTTACTCTGTTCTGTTCCATTaGTCTATATATCTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: AETLDVCHLLAVRPWASYSVLFH*SIYLFW
Trigger: CCAAAACAGATATATAGACCAATGGAACAGAACAGA...GTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CCA 90 bp GCAGAGACTCTGGATGTCTGCCACTTACTAGCTGTGCGACCTTGGGCAAGTTACCCCATTTGTCAATCTTaGCTTTTATTGCCATTACTT +
Preference number: 4 (lower is better)
Translates to: AETLDVCHLLAVRPWASYPICQS*LLLPLL
Trigger: AAGTAATGGCAATAAAAGCCAAGATTGACAAATGGG...GTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTGAGTGCCCGCTCAAGTaGAACAAAAGCGCAGCTAGT +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPECPLK*NKSAAS
Trigger: ACTAGCTGCGCTTTTGTTCCACTTGAGCGGGCACTC...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317336.11
CDS-3UTR CCA 90 bp GCAGAGACTCTGGATGTCTGCCACTTACTAGCTGTGCGACCTTGGGCAAGTTACTCTGTCATTAGCAGTTaGTACTTAATAGCGATGATT +
Preference number: 4 (lower is better)
Translates to: AETLDVCHLLAVRPWASYSVISS*YLIAMI
Trigger: AATCATCGCTATTAAGTACCAACTGCTAATGACAGA...GTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR TCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTTTCAGGCAGCTGAGATaGCTTTCACTGGTACACCGT +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPFRQLR*LSLVHR
Trigger: ACGGTGTACCAGTGAAAGTCATCTCAGCTGCCTGAA...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTTCGGCTTCCCTTTTATaGATTTGGATCTGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISSASLL*IWICSR
Trigger: ACGACTACAGATCCAAATTCATAAAAGGGAAGCCGA...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp ATTAAGCTGCTGAGGTCATCCACAGATCTGTACATCCATTCTGCACCACCCTATTCGGCTTCCCTTTTATaGATTTGGATCTGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: IKLLRSSTDLYIHSAPPYSASLL*IWICSR
Trigger: ACGACTACAGATCCAAATTCATAAAAGGGAAGCCGA...ATAGGGTGGTGCAGAATGGATGTACAGATCTGTGGATGACCTCAGCAGCTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR TCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTCCAGGCATTGGAAGCTaGAATTGTTTCAGACAACTT +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISPGIGS*NCFRQL
Trigger: AAGTTGTCTGAAACAATTTCAGCTTCCAATGCCTGG...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp ATTAAGCTGCTGAGGTCATCCACAGATCTGTACATCCATTCTGCACCACCCTATCCAGGCATTGGAAGCTaGAATTGTTTCAGACAACTT +
Preference number: 4 (lower is better)
Translates to: IKLLRSSTDLYIHSAPPYPGIGS*NCFRQL
Trigger: AAGTTGTCTGAAACAATTTCAGCTTCCAATGCCTGG...ATAGGGTGGTGCAGAATGGATGTACAGATCTGTGGATGACCTCAGCAGCTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR TCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTTCTAACTCCTTCAGATaGGACTCCATCTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPSNSFR*DSIWPL
Trigger: GAGAGGCCAGATGGAGTCTCATCTGAAGGAGTTAGA...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTACAGGCCCTGGTGTGTaGTGTTCCCTGCCCTGTATC +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSTGPGV*CSLPCI
Trigger: GATACAGGGCAGGGAACATCACACACCAGGGCCTGT...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTTGGCAATCCTTCTTGTaGTCTGAGTCGGCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSWQSFL*SESARR
Trigger: CCTCCTAGCCGACTCAGAGCACAAGAAGGATTGCCA...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp ACAACTGATGGCATCTTAGAGGCTATGTCAAAAATCTGTGTGTTCTTAAGCACATGGCAATCCTTCTTGTaGTCTGAGTCGGCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: TTDGILEAMSKICVFLSTWQSFL*SESARR
Trigger: CCTCCTAGCCGACTCAGAGCACAAGAAGGATTGCCA...TGTGCTTAAGAACACACAGATTTTTGACATAGCCTCTAAGATGCCATCAGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478286.2
CDS-3UTR GCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTAGGCGCCACGGCTGCTaGAATGGAAACCGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSRRHGC*NGNRGN
Trigger: ATTGCCACGGTTTCCATTGCAGCAGCCGTGGCGCCT...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp GAAAGTTCTTGGATATGGGCCTCCTTTTCAAATACCTTCTTCTTAAGATTAGTAAGGCGCCACGGCTGCTaGAATGGAAACCGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: ESSWIWASFSNTFFLRLVRRHGC*NGNRGN
Trigger: ATTGCCACGGTTTCCATTGCAGCAGCCGTGGCGCCT...TACTAATCTTAAGAAGAAGGTATTTGAAAAGGAGGCCCATATCCAAGAACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR GCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCCGCTTCCTTAAGTGTTaGTTCCAATTCAGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: PWCVMFPALYPCILIVQLRFLKC*FQFSLF
Trigger: GAAAAGACTGAATTGGAAGCAACACTTAAGGAAGCG...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp AATAAGACAGTTTTCCTCTTCCAGAGAAAGCTTTGTCAGAAGATTGTGATTTCCCTGCACACTTCCCCTTaGAGCACTGCAGACTCTCCT +
Preference number: 4 (lower is better)
Translates to: NKTVFLFQRKLCQKIVISLHTSP*STADSP
Trigger: AGGAGAGTCTGCAGTGCTGCAAGGGGAAGTGTGCAG...GGAAATCACAATCTTCTGACAAAGCTTTCTCTGGAAGAGGAAAACTGTCTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531412.5
CDS-3UTR GCA 90 bp AATAAGACAGTTTTCCTCTTCCAGAGAAAGCTTTGTCAGAAGATTGTGATTTCCGGTGTGTTCCTGGTCTaGACACTTCCCCTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: NKTVFLFQRKLCQKIVISGVFLV*TLPLAA
Trigger: TGCTGCAAGGGGAAGTGTGCAGACCAGGAACACACC...GGAAATCACAATCTTCTGACAAAGCTTTCTCTGGAAGAGGAAAACTGTCTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531412.5
CDS-3UTR GCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTACATTCTTCTTGGTTTaGCAGCTTCTTCTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISTFFLV*QLLLKL
Trigger: GAGCTTGAGAAGAAGCTGGCAAACCAAGAAGAATGT...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTCAGTTGTCTGGCCAATaGTGTATACTCTGCAGATTT +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISQLSGQ*CILCRF
Trigger: AAATCTGCAGAGTATACAGCATTGGCCAGACAACTG...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp ACAACTGATGGCATCTTAGAGGCTATGTCAAAAATCTGTGTGTTCTTAAGCACACTTGCCGCAGAAGAGTaGCCGCTCAAGTGGAACAAA +
Preference number: 4 (lower is better)
Translates to: TTDGILEAMSKICVFLSTLAAEE*PLKWNK
Trigger: TTTGTTCCACTTGAGCGGGCACTCTTCTGCGGCAAG...TGTGCTTAAGAACACACAGATTTTTGACATAGCCTCTAAGATGCCATCAGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478286.2
CDS-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTCTAATGGTGTGTTCCTaGTCTGCACACTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPLMVCS*SAHFPL
Trigger: CAAGGGGAAGTGTGCAGACCAGGAACACACCATTAG...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp AGCTTCCAGTTGTCTGGCCAATGCTGTATACTCTGCAGATTTCTCTTTAAACTTCTAATGGTGTGTTCCTaGTCTGCACACTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: SFQLSGQCCILCRFLFKLLMVCS*SAHFPL
Trigger: CAAGGGGAAGTGTGCAGACCAGGAACACACCATTAG...AAGTTTAAAGAGAAATCTGCAGAGTATACAGCATTGGCCAGACAACTGGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531412.5
CDS-3UTR CCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCGATCACCATTCTAATTaGTGTGACATGGTATCTCAC +
Preference number: 4 (lower is better)
Translates to: PWCVMFPALYPCILIVQLDHHSN*CDMVSH
Trigger: GTGAGATACCATGTCACACCAATTAGAATGGTGATC...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTGGTATACACGTGCCATaGTGGTTTGCTGCACTCATC +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPGIHVP*WFAALI
Trigger: GATGAGTGCAGCAAACCACCATGGCACGTGTATACC...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp ACAACTGATGGCATCTTAGAGGCTATGTCAAAAATCTGTGTGTTCTTAAGCACAGAGTGCCCGCTCAAGTaGAACAAAAGCGCAGCTAGT +
Preference number: 4 (lower is better)
Translates to: TTDGILEAMSKICVFLSTECPLK*NKSAAS
Trigger: ACTAGCTGCGCTTTTGTTCCACTTGAGCGGGCACTC...TGTGCTTAAGAACACACAGATTTTTGACATAGCCTCTAAGATGCCATCAGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478286.2
3UTR CAA 72 bp TGTAAACCACGTCATCCCCTTTTAGAGTATCCTGCCTaGGCACACACAGTGGGAGATTATAGCAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: CKPRHPLLEYPA*AHTVGDYSKQV
Trigger: AACTTGTTTGCTATAATCTCCCACTGTGTGTGCCAAGGCAGGATACTCTAAAAGGGGATGACGTGGTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR TCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTAAGAGTTCTTCTGAATaGCTTCCATCATTTACAGCC +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISKSSSE*LPSFTA
Trigger: GGCTGTAAATGATGGAAGTCATTCAGAAGAACTCTT...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCGCAAAAGAGTTCTTCTaGATGACTTCCATCATTTAC +
Preference number: 4 (lower is better)
Translates to: PWCVMFPALYPCILIVQLAKEFF*MTSIIY
Trigger: GTAAATGATGGAAGTCATTCAGAAGAACTCTTTTGC...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCATGTACTACTTTTACTaGTTGGGAAAAACGGTTTGC +
Preference number: 4 (lower is better)
Translates to: PWCVMFPALYPCILIVQLMYYFY*LGKTVC
Trigger: GCAAACCGTTTTTCCCAATCAGTAAAAGTAGTACAT...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTATTCTTATTCATTCTTaGTTGCAGGTTCCACTTGGC +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISILIHS*LQVPLG
Trigger: GCCAAGTGGAACCTGCAATCAAGAATGAATAAGAAT...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTGTCTCTATAGCAGCATaGTTTATAGTCCTTTGGGTA +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISVSIAA*FIVLWV
Trigger: TACCCAAAGGACTATAAATCATGCTGCTATAGAGAC...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp AAACATCTTAAAGAGATATTTCTGTTCATAGGCTGGAACTGTGTAGTTCACAACCCATCAACCTGGCCCTaGAGCTCCCTAATGGTGTGT +
Preference number: 4 (lower is better)
Translates to: KHLKEIFLFIGWNCVVHNPSTWP*SSLMVC
Trigger: ACACACCATTAGGGAGCTTCAGGGCCAGGTTGATGG...GTTGTGAACTACACAGTTCCAGCCTATGAACAGAAATATCTCTTTAAGATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR TCA 90 bp CCTTTTCACTCTGAAACAAACAAGAAAGTTCTTGGATATGGGCCTCCTTTTCAAATTCGCCAGCTGAGATaGCTTTCACTGGTACACCGT +
Preference number: 4 (lower is better)
Translates to: PFHSETNKKVLGYGPPFQIRQLR*LSLVHR
Trigger: ACGGTGTACCAGTGAAAGTCATCTCAGCTGGCGAAT...TTGAAAAGGAGGCCCATATCCAAGAACTTTCTTGTTTGTTTCAGAGTGAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR GCA 90 bp CCCTTTTATGAATTTGGATCTGTAGTCGTTCATGTACTACTTTTACTGATTGGGTGGCAATCCTTCTTGTaGTCTGAGTCGGCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: PFYEFGSVVVHVLLLLIGWQSFL*SESARR
Trigger: CCTCCTAGCCGACTCAGAGCACAAGAAGGATTGCCA...CCCAATCAGTAAAAGTAGTACATGAACGACTACAGATCCAAATTCATAAAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR GCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTCTGCACACTTCCCCTTaGAGCACTGCAGACTCTCCT +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSLHTSP*STADSP
Trigger: AGGAGAGTCTGCAGTGCTGCAAGGGGAAGTGTGCAG...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTGGTGTGTTCCTGGTCTaGACACTTCCCCTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSGVFLV*TLPLAA
Trigger: TGCTGCAAGGGGAAGTGTGCAGACCAGGAACACACC...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTTCTGAAACTGAGCAATaGCCAGCTCAGGAAATGAGG +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPSETEQ*PAQEMR
Trigger: CCTCATTTCCTGAGCTGGGCATTGCTCAGTTTCAGA...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR GCA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTCCTTTTAGAGTATCCTaGCTTGGCACACACAGTGGG +
Preference number: 4 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSPFRVS*LGTHSG
Trigger: CCCACTGTGTGTGCCAAGGCAGGATACTCTAAAAGG...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTCTGCAATGGAAACCGTaGCAATCCTTCTTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPLQWKP*QSFLCS
Trigger: AGAGCACAAGAAGGATTGCCACGGTTTCCATTGCAG...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp GAAAGTTCTTGGATATGGGCCTCCTTTTCAAATACCTTCTTCTTAAGATTAGTACCACGGCTGCTGCAATaGAAACCGTGGCAATCCTTC +
Preference number: 4 (lower is better)
Translates to: ESSWIWASFSNTFFLRLVPRLLQ*KPWQSF
Trigger: GAAGGATTGCCACGGTTTCCATTGCAGCAGCCGTGG...TACTAATCTTAAGAAGAAGGTATTTGAAAAGGAGGCCCATATCCAAGAACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR CCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTGACTTTTCCAGGCATTaGAAGCTGAAATTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISDFSRH*KLKLFQ
Trigger: CTGAAACAATTTCAGCTTCCAATGCCTGGAAAAGTC...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCATTTCATGGAGTCTCTaGATCACTGTTCATTTTGCA +
Preference number: 4 (lower is better)
Translates to: PWCVMFPALYPCILIVQLISWSL*ITVHFA
Trigger: TGCAAAATGAACAGTGATCCAGAGACTCCATGAAAT...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCCTAATTGGTGTGACATaGTATCTCACTGTAGTTTTG +
Preference number: 4 (lower is better)
Translates to: PWCVMFPALYPCILIVQLLIGVT*YLTVVL
Trigger: CAAAACTACAGTGAGATACCATGTCACACCAATTAG...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCAGAACATGCGGTGTTTaGTTTTCTGTTCTTGTGTTA +
Preference number: 4 (lower is better)
Translates to: PWCVMFPALYPCILIVQLRTCGV*FSVLVL
Trigger: TAACACAAGAACAGAAAACCAAACACCGCATGTTCT...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTATACACGTGCCATGGTaGTTTGCTGCACTCATCAAC +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPIHVPW*FAALIN
Trigger: GTTGATGAGTGCAGCAAACCACCATGGCACGTGTAT...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTATCATCCCCATGAGTTaGCCATGGAAAGGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSIIPMS*PWKGWD
Trigger: ATCCCACCCTTTCCATGGCCAACTCATGGGGATGAT...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR TCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTCCTGCTTCAGGCAGCTaGGATGACTTTCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSPASGS*DDFHWY
Trigger: GTACCAGTGAAAGTCATCTCAGCTGCCTGAAGCAGG...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGAGCAATTCTACAGAATaGGTTACCAACTCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: PISCFSQVCQTADGCRCVSNSTE*VTNSAS
Trigger: GGAAGCGGAGTTGGTAACTCATTCTGTAGAATTGCT...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp AGCAGCTTCCAGTTGTCTGGCCAATGCTGTATACTCTGCAGATTTCTCTTTAAATTTGTCAGAAGATTGTaGTTTCCATCAACCCATGCC +
Preference number: 4 (lower is better)
Translates to: SSFQLSGQCCILCRFLFKFVRRL*FPSTHA
Trigger: GGCATGGGTTGATGGAAATCACAATCTTCTGACAAA...TTTAAAGAGAAATCTGCAGAGTATACAGCATTGGCCAGACAACTGGAAGCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531412.5
CDS-3UTR TCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTATCGACGTTTTGTTCTaGCTAAGTTGTCATGAAACT +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISIDVLF*LSCHET
Trigger: AGTTTCATGACAACTTAGTCAGAACAAAACGTCGAT...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp ATTAAGCTGCTGAGGTCATCCACAGATCTGTACATCCATTCTGCACCACCCTATTACTACAAATTCACTTaGATGGTGGCTACAAACATC +
Preference number: 4 (lower is better)
Translates to: IKLLRSSTDLYIHSAPPYYYKFT*MVATNI
Trigger: GATGTTTGTAGCCACCATTCAAGTGAATTTGTAGTA...ATAGGGTGGTGCAGAATGGATGTACAGATCTGTGGATGACCTCAGCAGCTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR TCA 90 bp ACAACTGATGGCATCTTAGAGGCTATGTCAAAAATCTGTGTGTTCTTAAGCACAGAATACCAGCTGAGATaGCTTTCACTGGTACACCGT +
Preference number: 4 (lower is better)
Translates to: TTDGILEAMSKICVFLSTEYQLR*LSLVHR
Trigger: ACGGTGTACCAGTGAAAGTCATCTCAGCTGGTATTC...TGTGCTTAAGAACACACAGATTTTTGACATAGCCTCTAAGATGCCATCAGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478286.2
CDS-3UTR TCA 90 bp CAGTTGTCTGGCCAATGCTGTATACTCTGCAGATTTCTCTTTAAACTTAAGATTTCCATATTCTGGCCCTaGAGCTCCCTAATGGTGTGT +
Preference number: 4 (lower is better)
Translates to: QLSGQCCILCRFLFKLKISIFWP*SSLMVC
Trigger: ACACACCATTAGGGAGCTTCAGGGCCAGAATATGGA...AATCTTAAGTTTAAAGAGAAATCTGCAGAGTATACAGCATTGGCCAGACAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531412.5
CDS-3UTR GCA 90 bp AAACATCTTAAAGAGATATTTCTGTTCATAGGCTGGAACTGTGTAGTTCACAACTGGCAATCCTTCTTGTaGTCTGAGTCGGCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: KHLKEIFLFIGWNCVVHNWQSFL*SESARR
Trigger: CCTCCTAGCCGACTCAGAGCACAAGAAGGATTGCCA...GTTGTGAACTACACAGTTCCAGCCTATGAACAGAAATATCTCTTTAAGATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR GCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCAACTTAAGATTGCTGTaGTTAAGACATTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PWCVMFPALYPCILIVQLNLRLL*LRHSSW
Trigger: CCAAGAAGAATGTCTTAAGCACAGCAATCTTAAGTT...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTCTTGCCGCAGAAGAGTaGCCGCTCAAGTGGAACAAA +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSLAAEE*PLKWNK
Trigger: TTTGTTCCACTTGAGCGGGCACTCTTCTGCGGCAAG...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317336.11
CDS-3UTR CCA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTCTGCAATGGAAACCGTaGCAATCCTTCTTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSLQWKP*QSFLCS
Trigger: AGAGCACAAGAAGGATTGCCACGGTTTCCATTGCAG...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp ACAACTGATGGCATCTTAGAGGCTATGTCAAAAATCTGTGTGTTCTTAAGCACACTGCAATGGAAACCGTaGCAATCCTTCTTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: TTDGILEAMSKICVFLSTLQWKP*QSFLCS
Trigger: AGAGCACAAGAAGGATTGCCACGGTTTCCATTGCAG...TGTGCTTAAGAACACACAGATTTTTGACATAGCCTCTAAGATGCCATCAGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478286.2
CDS-3UTR CCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCTATTTCCTTAAGCAGTaGTTTGTAGTTCTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: PWCVMFPALYPCILIVQLYFLKQ*FVVLLE
Trigger: TTCAAGGAGAACTACAAACCACTGCTTAAGGAAATA...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCCCCATTTGTCAATCTTaGCTTTTATTGCCATTACTT +
Preference number: 4 (lower is better)
Translates to: PWCVMFPALYPCILIVQLPICQS*LLLPLL
Trigger: AAGTAATGGCAATAAAAGCCAAGATTGACAAATGGG...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCTGGCCCTTTGTCAGATaGATAGATTGCAAAAATTTT +
Preference number: 4 (lower is better)
Translates to: PWCVMFPALYPCILIVQLWPFVR*IDCKNF
Trigger: AAAATTTTTGCAATCTATCCATCTGACAAAGGGCCA...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTCTAATTGGTGTGACATaGTATCTCACTGTAGTTTTG +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISLIGVT*YLTVVL
Trigger: CAAAACTACAGTGAGATACCATGTCACACCAATTAG...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTGATGGGCATTTGGGTTaGCTCCAAGTCTTTGCTATT +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPDGHLG*LQVFAI
Trigger: AATAGCAAAGACTTGGAGCCAACCCAAATGCCCATC...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTTCATTGATGGGCATTTaGGTTGGCTCCAAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPSLMGI*VGSKSL
Trigger: CAAAGACTTGGAGCCAACCCAAATGCCCATCAATGA...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTAGAACATGCGGTGTTTaGTTTTCTGTTCTTGTGTTA +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISRTCGV*FSVLVL
Trigger: TAACACAAGAACAGAAAACCAAACACCGCATGTTCT...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTATACACGTGCCATGGTaGTTTGCTGCACTCATCAAC +
Preference number: 4 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSIHVPW*FAALIN
Trigger: GTTGATGAGTGCAGCAAACCACCATGGCACGTGTAT...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR CAA 72 bp GTTCAACTCCCACTTATGAGTGAGAACATGCGGTGTTaGGTTTTCTGTTCTTGTGTTAGTTTGCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: VQLPLMSENMRC*VFCSCVSLLRM
Trigger: CATTCTCAGCAAACTAACACAAGAACAGAAAACCAAACACCGCATGTTCTCACTCATAAGTGGGAGTTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTTTCAGGCAGCTGAGATaGCTTTCACTGGTACACCGT +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSFRQLR*LSLVHR
Trigger: ACGGTGTACCAGTGAAAGTCATCTCAGCTGCCTGAA...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGCCAGGCATTGGAAGCTaGAATTGTTTCAGACAACTT +
Preference number: 4 (lower is better)
Translates to: PISCFSQVCQTADGCRCVPGIGS*NCFRQL
Trigger: AAGTTGTCTGAAACAATTTCAGCTTCCAATGCCTGG...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGTTTGTCAGAAGATTGTaGTTTCCATCAACCCATGCC +
Preference number: 4 (lower is better)
Translates to: PISCFSQVCQTADGCRCVFVRRL*FPSTHA
Trigger: GGCATGGGTTGATGGAAATCACAATCTTCTGACAAA...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294678.6
CDS-3UTR TCA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTTTTGTCAGAAGATTGTaGTTTCCATCAACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSFVRRL*FPSTWP
Trigger: GGGCCAGGTTGATGGAAATCACAATCTTCTGACAAA...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTGTGTTCAATGACACCTaGTACCTTCTGAAACTGAGC +
Preference number: 4 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSVFNDT*YLLKLS
Trigger: GCTCAGTTTCAGAAGGTATCAGGTGTCATTGAACAC...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR TCA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGGAGTCACTATTACTTaGTCCTTTGTAAACCACGTC +
Preference number: 4 (lower is better)
Translates to: PISCFSQVCQTADGCRCVGVTIT*SFVNHV
Trigger: GACGTGGTTTACAAAGGATCAAGTAATAGTGACTCC...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR TCA 90 bp ACAACTGATGGCATCTTAGAGGCTATGTCAAAAATCTGTGTGTTCTTAAGCACAGATGAGAATACCAGCTaGGATGACTTTCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: TTDGILEAMSKICVFLSTDENTS*DDFHWY
Trigger: GTACCAGTGAAAGTCATCTCAGCTGGTATTCTCATC...TGTGCTTAAGAACACACAGATTTTTGACATAGCCTCTAAGATGCCATCAGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478286.2
CDS-3UTR GCA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGACATTCTTCTTGGTTTaGCAGCTTCTTCTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: PISCFSQVCQTADGCRCVTFFLV*QLLLKL
Trigger: GAGCTTGAGAAGAAGCTGGCAAACCAAGAAGAATGT...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTAACTTAAGATTGCTGTaGTTAAGACATTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISNLRLL*LRHSSW
Trigger: CCAAGAAGAATGTCTTAAGCACAGCAATCTTAAGTT...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTCAGTTGTCTGGCCAATaGTGTATACTCTGCAGATTT +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPQLSGQ*CILCRF
Trigger: AAATCTGCAGAGTATACAGCATTGGCCAGACAACTG...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTTCTGTTCATATTCTTTaGACACTTTTTGATGGGGTT +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISSVHIL*TLFDGV
Trigger: AACCCCATCAAAAAGTGTGCAAAGAATATGAACAGA...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTCAAACATCAACTGAGTaGCCAGATATTTATATGACT +
Preference number: 4 (lower is better)
Translates to: VPWWFAALINPSSTLGISQTSTE*PDIYMT
Trigger: AGTCATATAAATATCTGGGCACTCAGTTGATGTTTG...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR GCA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGCTGGCACATAGCAAGTaGTTAATCAATCATAGCAGC +
Preference number: 4 (lower is better)
Translates to: PISCFSQVCQTADGCRCVLAHSK*LINHSS
Trigger: GCTGCTATGATTGATTAAGCACTTGCTATGTGCCAG...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CCA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGAAATGGATTTATAGGTaGCTTCACAGCGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: PISCFSQVCQTADGCRCVKWIYR*LHSDFS
Trigger: GGAGAAGTCGCTGTGAAGCCACCTATAAATCCATTT...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTAAATGGATTTATAGGTaGCTTCACAGCGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPKWIYR*LHSDFS
Trigger: GGAGAAGTCGCTGTGAAGCCACCTATAAATCCATTT...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTATTGCAGGTTCCACTTaGCTATCTTGGTTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPIAGST*LSWFLS
Trigger: GCTTAGAAACCAAGATAGCCAAGTGGAACCTGCAAT...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTCTAATGGTGTGTTCCTaGTCTGCACACTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSLMVCS*SAHFPL
Trigger: CAAGGGGAAGTGTGCAGACCAGGAACACACCATTAG...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGTGCCTATGTCCTGAATaGTATTGCCTAGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: PISCFSQVCQTADGCRCVCLCPE*YCLGFP
Trigger: AGGAAAACCTAGGCAATACCATTCAGGACATAGGCA...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTAAGAGTTCTTCTGAATaGCTTCCATCATTTACAGCC +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPKSSSE*LPSFTA
Trigger: GGCTGTAAATGATGGAAGTCATTCAGAAGAACTCTT...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTTCGGCTTCCCTTTTATaGATTTGGATCTGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSSASLL*IWICSR
Trigger: ACGACTACAGATCCAAATTCATAAAAGGGAAGCCGA...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp CCTTTTCACTCTGAAACAAACAAGAAAGTTCTTGGATATGGGCCTCCTTTTCAATCGGCTTCCCTTTTATaGATTTGGATCTGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: PFHSETNKKVLGYGPPFQSASLL*IWICSR
Trigger: ACGACTACAGATCCAAATTCATAAAAGGGAAGCCGA...TTGAAAAGGAGGCCCATATCCAAGAACTTTCTTGTTTGTTTCAGAGTGAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR TCA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGATTCTTATTCATTCTTaGTTGCAGGTTCCACTTGGC +
Preference number: 4 (lower is better)
Translates to: PISCFSQVCQTADGCRCVILIHS*LQVPLG
Trigger: GCCAAGTGGAACCTGCAATCAAGAATGAATAAGAAT...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTATTCTTATTCATTCTTaGTTGCAGGTTCCACTTGGC +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPILIHS*LQVPLG
Trigger: GCCAAGTGGAACCTGCAATCAAGAATGAATAAGAAT...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTGTCTCTATAGCAGCATaGTTTATAGTCCTTTGGGTA +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPVSIAA*FIVLWV
Trigger: TACCCAAAGGACTATAAATCATGCTGCTATAGAGAC...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGCCCAGATATTTATATaGCTAAGATACATTTCGGCC +
Preference number: 4 (lower is better)
Translates to: PISCFSQVCQTADGCRCVAQIFI*LRYISA
Trigger: GGCCGAAATGTATCTTAGTCATATAAATATCTGGGC...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR TCA 90 bp AAACATCTTAAAGAGATATTTCTGTTCATAGGCTGGAACTGTGTAGTTCACAACACAGAGGTAGTATGGTaGGAGTTAAGAGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: KHLKEIFLFIGWNCVVHNTEVVW*ELRAEQ
Trigger: CTGCTCTGCTCTTAACTCTCACCATACTACCTCTGT...GTTGTGAACTACACAGTTCCAGCCTATGAACAGAAATATCTCTTTAAGATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR TCA 90 bp GAAAGTTCTTGGATATGGGCCTCCTTTTCAAATACCTTCTTCTTAAGATTAGTAGAAAGATTCGCCAGCTaGGATGACTTTCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: ESSWIWASFSNTFFLRLVERFAS*DDFHWY
Trigger: GTACCAGTGAAAGTCATCTCAGCTGGCGAATCTTTC...TACTAATCTTAAGAAGAAGGTATTTGAAAAGGAGGCCCATATCCAAGAACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR GCA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTACATTCTTCTTGGTTTaGCAGCTTCTTCTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSTFFLV*QLLLKL
Trigger: GAGCTTGAGAAGAAGCTGGCAAACCAAGAAGAATGT...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp GGCCAATGCTGTATACTCTGCAGATTTCTCTTTAAACTTAAGATTGCTGTGCTTCAGTTGTCTGGCCAATaGTGTATACTCTGCAGATTT +
Preference number: 4 (lower is better)
Translates to: GQCCILCRFLFKLKIAVLQLSGQ*CILCRF
Trigger: AAATCTGCAGAGTATACAGCATTGGCCAGACAACTG...AAGCACAGCAATCTTAAGTTTAAAGAGAAATCTGCAGAGTATACAGCATTGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531412.5
CDS-3UTR CCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTCTGCAATGGAAACCGTaGCAATCCTTCTTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSLQWKP*QSFLCS
Trigger: AGAGCACAAGAAGGATTGCCACGGTTTCCATTGCAG...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp GAAAGTTCTTGGATATGGGCCTCCTTTTCAAATACCTTCTTCTTAAGATTAGTACTGCAATGGAAACCGTaGCAATCCTTCTTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: ESSWIWASFSNTFFLRLVLQWKP*QSFLCS
Trigger: AGAGCACAAGAAGGATTGCCACGGTTTCCATTGCAG...TACTAATCTTAAGAAGAAGGTATTTGAAAAGGAGGCCCATATCCAAGAACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR CCA 90 bp ACAACTGATGGCATCTTAGAGGCTATGTCAAAAATCTGTGTGTTCTTAAGCACAAAATGGATTTATAGGTaGCTTCACAGCGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: TTDGILEAMSKICVFLSTKWIYR*LHSDFS
Trigger: GGAGAAGTCGCTGTGAAGCCACCTATAAATCCATTT...TGTGCTTAAGAACACACAGATTTTTGACATAGCCTCTAAGATGCCATCAGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478286.2
CDS-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTGAAAGTTCTTGGATATaGGCCTCCTTTTCAAATACC +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPESSWI*ASFSNT
Trigger: GGTATTTGAAAAGGAGGCCCATATCCAAGAACTTTC...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAAAGTTCTTGGATATaGGCCTCCTTTTCAAATACC +
Preference number: 4 (lower is better)
Translates to: PISCFSQVCQTADGCRCVESSWI*ASFSNT
Trigger: GGTATTTGAAAAGGAGGCCCATATCCAAGAACTTTC...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTATTGCAGGTTCCACTTaGCTATCTTGGTTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSIAGST*LSWFLS
Trigger: GCTTAGAAACCAAGATAGCCAAGTGGAACCTGCAAT...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTTCAGTTTTCTGCATATaGCTAGCCAGTTTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSSVFCI*LASFPN
Trigger: GTTGGGAAAACTGGCTAGCCATATGCAGAAAACTGA...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGTAGATTCTGGATATTaGCCCTTTGTCAGATGGATA +
Preference number: 4 (lower is better)
Translates to: PISCFSQVCQTADGCRCVVDSGY*PFVRWI
Trigger: TATCCATCTGACAAAGGGCCAATATCCAGAATCTAC...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTGTAGATTCTGGATATTaGCCCTTTGTCAGATGGATA +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPVDSGY*PFVRWI
Trigger: TATCCATCTGACAAAGGGCCAATATCCAGAATCTAC...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTGATCACCATTCTAATTaGTGTGACATGGTATCTCAC +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPDHHSN*CDMVSH
Trigger: GTGAGATACCATGTCACACCAATTAGAATGGTGATC...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGACAGAACGTACAGGTTaGTTACATAGGTATACACGT +
Preference number: 4 (lower is better)
Translates to: PISCFSQVCQTADGCRCVTERTG*LHRYTR
Trigger: ACGTGTATACCTATGTAACCAACCTGTACGTTCTGT...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp AAACATCTTAAAGAGATATTTCTGTTCATAGGCTGGAACTGTGTAGTTCACAACCTAGCTGTGCGACCTTaGGCAAGTTACCTAACCTTT +
Preference number: 4 (lower is better)
Translates to: KHLKEIFLFIGWNCVVHNLAVRP*ASYLTF
Trigger: AAAGGTTAGGTAACTTGCCCAAGGTCGCACAGCTAG...GTTGTGAACTACACAGTTCCAGCCTATGAACAGAAATATCTCTTTAAGATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR TCA 90 bp ACAACTGATGGCATCTTAGAGGCTATGTCAAAAATCTGTGTGTTCTTAAGCACAAAGAGTTCTTCTGAATaGCTTCCATCATTTACAGCC +
Preference number: 4 (lower is better)
Translates to: TTDGILEAMSKICVFLSTKSSSE*LPSFTA
Trigger: GGCTGTAAATGATGGAAGTCATTCAGAAGAACTCTT...TGTGCTTAAGAACACACAGATTTTTGACATAGCCTCTAAGATGCCATCAGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478286.2
CDS-3UTR TCA 90 bp CCTTTTCACTCTGAAACAAACAAGAAAGTTCTTGGATATGGGCCTCCTTTTCAAAAGAGTTCTTCTGAATaGCTTCCATCATTTACAGCC +
Preference number: 4 (lower is better)
Translates to: PFHSETNKKVLGYGPPFQKSSSE*LPSFTA
Trigger: GGCTGTAAATGATGGAAGTCATTCAGAAGAACTCTT...TTGAAAAGGAGGCCCATATCCAAGAACTTTCTTGTTTGTTTCAGAGTGAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR TCA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGCAAAAGAGTTCTTCTaGATGACTTCCATCATTTAC +
Preference number: 4 (lower is better)
Translates to: PISCFSQVCQTADGCRCVAKEFF*MTSIIY
Trigger: GTAAATGATGGAAGTCATTCAGAAGAACTCTTTTGC...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp GGAAGTAAGCTTTTCAATAGCTCCTGTAAAATGGTCAAGCCTTTGTTTGTAAACCCAGGCATTGGAAGCTaGAATTGTTTCAGACAACTT +
Preference number: 4 (lower is better)
Translates to: GSKLFNSSCKMVKPLFVNPGIGS*NCFRQL
Trigger: AAGTTGTCTGAAACAATTTCAGCTTCCAATGCCTGG...GTTTACAAACAAAGGCTTGACCATTTTACAGGAGCTATTGAAAAGCTTACTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR TCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTATCGACGTTTTGTTCTaGCTAAGTTGTCATGAAACT +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPIDVLF*LSCHET
Trigger: AGTTTCATGACAACTTAGTCAGAACAAAACGTCGAT...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTAAATGTGGCCAGTTCTaGCACTCTGTATTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSKCGQF*HSVFCY
Trigger: ATAGCAAAATACAGAGTGTCAGAACTGGCCACATTT...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR TCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTTCCACAAACATCAACTaGGTGCCCAGATATTTATAT +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPSTNIN*VPRYLY
Trigger: ATATAAATATCTGGGCACTCAGTTGATGTTTGTGGA...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR GCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTGATTTTCTAGCAACATaGTGGATAAATTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPDFLAT*WINCLL
Trigger: CAGGAGACAATTTATCCAGCATGTTGCTAGAAAATC...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGATTTCCATCAACCCATaGCAAGACAGAATATTCTTC +
Preference number: 4 (lower is better)
Translates to: PISCFSQVCQTADGCRCVISINP*QDRIFF
Trigger: GAAGAATATTCTGTCTTGGCATGGGTTGATGGAAAT...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294678.6
CDS-3UTR GCA 90 bp AATAAGACAGTTTTCCTCTTCCAGAGAAAGCTTTGTCAGAAGATTGTGATTTCCACATTCTTCTTGGTTTaGCAGCTTCTTCTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: NKTVFLFQRKLCQKIVISTFFLV*QLLLKL
Trigger: GAGCTTGAGAAGAAGCTGGCAAACCAAGAAGAATGT...GGAAATCACAATCTTCTGACAAAGCTTTCTCTGGAAGAGGAAAACTGTCTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531412.5
CDS-3UTR GCA 90 bp AGCTTCCAGTTGTCTGGCCAATGCTGTATACTCTGCAGATTTCTCTTTAAACTTCACTGCTTCAAAATCTaGTACATGATCCATATTCTG +
Preference number: 4 (lower is better)
Translates to: SFQLSGQCCILCRFLFKLHCFKI*YMIHIL
Trigger: CAGAATATGGATCATGTAGCAGATTTTGAAGCAGTG...AAGTTTAAAGAGAAATCTGCAGAGTATACAGCATTGGCCAGACAACTGGAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531412.5
CDS-3UTR CCA 90 bp GGAAGTAAGCTTTTCAATAGCTCCTGTAAAATGGTCAAGCCTTTGTTTGTAAACAAATGGATTTATAGGTaGCTTCACAGCGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: GSKLFNSSCKMVKPLFVNKWIYR*LHSDFS
Trigger: GGAGAAGTCGCTGTGAAGCCACCTATAAATCCATTT...GTTTACAAACAAAGGCTTGACCATTTTACAGGAGCTATTGAAAAGCTTACTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR CCA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTGAAAGTTCTTGGATATaGGCCTCCTTTTCAAATACC +
Preference number: 4 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSESSWI*ASFSNT
Trigger: GGTATTTGAAAAGGAGGCCCATATCCAAGAACTTTC...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp CCCTTTTATGAATTTGGATCTGTAGTCGTTCATGTACTACTTTTACTGATTGGGATTGCAGGTTCCACTTaGCTATCTTGGTTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: PFYEFGSVVVHVLLLLIGIAGST*LSWFLS
Trigger: GCTTAGAAACCAAGATAGCCAAGTGGAACCTGCAAT...CCCAATCAGTAAAAGTAGTACATGAACGACTACAGATCCAAATTCATAAAAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTTTAAGACATTCTTCTTaGTTTGCCAGCTTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPLRHSS*FASFFS
Trigger: TGAGAAGAAGCTGGCAAACCAAGAAGAATGTCTTAA...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTATTTCATGGAGTCTCTaGATCACTGTTCATTTTGCA +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPISWSL*ITVHFA
Trigger: TGCAAAATGAACAGTGATCCAGAGACTCCATGAAAT...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTTCATTGATGGGCATTTaGGTTGGCTCCAAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSSLMGI*VGSKSL
Trigger: CAAAGACTTGGAGCCAACCCAAATGCCCATCAATGA...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR CAA 72 bp ATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATaGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCT +
Preference number: 4 (lower is better)
Translates to: IYSPLGIYPVMG*LGQMVFLVLDP
Trigger: AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATATACCCAAAGGACTATAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp ACAACTGATGGCATCTTAGAGGCTATGTCAAAAATCTGTGTGTTCTTAAGCACAGCAAAAGAGTTCTTCTaGATGACTTCCATCATTTAC +
Preference number: 4 (lower is better)
Translates to: TTDGILEAMSKICVFLSTAKEFF*MTSIIY
Trigger: GTAAATGATGGAAGTCATTCAGAAGAACTCTTTTGC...TGTGCTTAAGAACACACAGATTTTTGACATAGCCTCTAAGATGCCATCAGTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478286.2
CDS-3UTR TCA 90 bp CCTTTTCACTCTGAAACAAACAAGAAAGTTCTTGGATATGGGCCTCCTTTTCAAGCAAAAGAGTTCTTCTaGATGACTTCCATCATTTAC +
Preference number: 4 (lower is better)
Translates to: PFHSETNKKVLGYGPPFQAKEFF*MTSIIY
Trigger: GTAAATGATGGAAGTCATTCAGAAGAACTCTTTTGC...TTGAAAAGGAGGCCCATATCCAAGAACTTTCTTGTTTGTTTCAGAGTGAAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR TCA 90 bp CCCTTTTATGAATTTGGATCTGTAGTCGTTCATGTACTACTTTTACTGATTGGGATTCTTATTCATTCTTaGTTGCAGGTTCCACTTGGC +
Preference number: 4 (lower is better)
Translates to: PFYEFGSVVVHVLLLLIGILIHS*LQVPLG
Trigger: GCCAAGTGGAACCTGCAATCAAGAATGAATAAGAAT...CCCAATCAGTAAAAGTAGTACATGAACGACTACAGATCCAAATTCATAAAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR GCA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTGATTTTCTAGCAACATaGTGGATAAATTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSDFLAT*WINCLL
Trigger: CAGGAGACAATTTATCCAGCATGTTGCTAGAAAATC...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGTTGGGAAAAACGGTTTaGTTTCAAAGTATTTGCCTT +
Preference number: 4 (lower is better)
Translates to: PISCFSQVCQTADGCRCVLGKTV*FQSICL
Trigger: AAGGCAAATACTTTGAAAGCAAACCGTTTTTCCCAA...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp GGCCAATGCTGTATACTCTGCAGATTTCTCTTTAAACTTAAGATTGCTGTGCTTATTTCCATCAACCCATaGCAAGACAGAATATTCTTC +
Preference number: 4 (lower is better)
Translates to: GQCCILCRFLFKLKIAVLISINP*QDRIFF
Trigger: GAAGAATATTCTGTCTTGGCATGGGTTGATGGAAAT...AAGCACAGCAATCTTAAGTTTAAAGAGAAATCTGCAGAGTATACAGCATTGGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531412.5
CDS-3UTR GCA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTAACTTAAGATTGCTGTaGTTAAGACATTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPNLRLL*LRHSSW
Trigger: CCAAGAAGAATGTCTTAAGCACAGCAATCTTAAGTT...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp AGCTTCCAGTTGTCTGGCCAATGCTGTATACTCTGCAGATTTCTCTTTAAACTTAACTTAAGATTGCTGTaGTTAAGACATTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SFQLSGQCCILCRFLFKLNLRLL*LRHSSW
Trigger: CCAAGAAGAATGTCTTAAGCACAGCAATCTTAAGTT...AAGTTTAAAGAGAAATCTGCAGAGTATACAGCATTGGCCAGACAACTGGAAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531412.5
CDS-3UTR GCA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGTCTGTTCATATTCTTTaGACACTTTTTGATGGGGTT +
Preference number: 4 (lower is better)
Translates to: PISCFSQVCQTADGCRCVSVHIL*TLFDGV
Trigger: AACCCCATCAAAAAGTGTGCAAAGAATATGAACAGA...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp GGCCAATGCTGTATACTCTGCAGATTTCTCTTTAAACTTAAGATTGCTGTGCTTGAATATTCTTCCCACTaGTTCAAAATCTGCTACATG +
Preference number: 4 (lower is better)
Translates to: GQCCILCRFLFKLKIAVLEYSSH*FKICYM
Trigger: CATGTAGCAGATTTTGAAGCAGTGGGAAGAATATTC...AAGCACAGCAATCTTAAGTTTAAAGAGAAATCTGCAGAGTATACAGCATTGGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531412.5
CDS-3UTR CCA 90 bp TCTGTAGTCGTTCATGTACTACTTTTACTGATTGGGAAAAACGGTTTGCTTTCAGAAAGTTCTTGGATATaGGCCTCCTTTTCAAATACC +
Preference number: 4 (lower is better)
Translates to: SVVVHVLLLLIGKNGLLSESSWI*ASFSNT
Trigger: GGTATTTGAAAAGGAGGCCCATATCCAAGAACTTTC...TGAAAGCAAACCGTTTTTCCCAATCAGTAAAAGTAGTACATGAACGACTACAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR CCA 90 bp CCCTTTTATGAATTTGGATCTGTAGTCGTTCATGTACTACTTTTACTGATTGGGGACTTTTCCAGGCATTaGAAGCTGAAATTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: PFYEFGSVVVHVLLLLIGDFSRH*KLKLFQ
Trigger: CTGAAACAATTTCAGCTTCCAATGCCTGGAAAAGTC...CCCAATCAGTAAAAGTAGTACATGAACGACTACAGATCCAAATTCATAAAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR CCA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTATTTCATGGAGTCTCTaGATCACTGTTCATTTTGCA +
Preference number: 4 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSISWSL*ITVHFA
Trigger: TGCAAAATGAACAGTGATCCAGAGACTCCATGAAAT...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp AAACATCTTAAAGAGATATTTCTGTTCATAGGCTGGAACTGTGTAGTTCACAACTGCCTATGTCCTGAATaGTATTGCCTAGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: KHLKEIFLFIGWNCVVHNCLCPE*YCLGFP
Trigger: AGGAAAACCTAGGCAATACCATTCAGGACATAGGCA...GTTGTGAACTACACAGTTCCAGCCTATGAACAGAAATATCTCTTTAAGATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CCA 90 bp ACAACTGATGGCATCTTAGAGGCTATGTCAAAAATCTGTGTGTTCTTAAGCACAGTTCTTAAGCACAACTaGCTTAAAGTAATGAGCCTA +
Preference number: 4 (lower is better)
Translates to: TTDGILEAMSKICVFLSTVLKHN*LKVMSL
Trigger: TAGGCTCATTACTTTAAGCCAGTTGTGCTTAAGAAC...TGTGCTTAAGAACACACAGATTTTTGACATAGCCTCTAAGATGCCATCAGTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478286.2
3UTR CAA 72 bp CACATTTTCTTTATTCAGTCTATCATTGATGGGCATTaGGGTTGGCTCCAAGTCTTTGCTATTGTGAATAGT +
Preference number: 4 (lower is better)
Translates to: HIFFIQSIIDGH*GWLQVFAIVNS
Trigger: ACTATTCACAATAGCAAAGACTTGGAGCCAACCCAAATGCCCATCAATGATAGACTGAATAAAGAAAATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp GGAAGTAAGCTTTTCAATAGCTCCTGTAAAATGGTCAAGCCTTTGTTTGTAAACATGTACTACTTTTACTaGTTGGGAAAAACGGTTTGC +
Preference number: 4 (lower is better)
Translates to: GSKLFNSSCKMVKPLFVNMYYFY*LGKTVC
Trigger: GCAAACCGTTTTTCCCAATCAGTAAAAGTAGTACAT...GTTTACAAACAAAGGCTTGACCATTTTACAGGAGCTATTGAAAAGCTTACTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR TCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTGTCTCTATAGCAGCATaGTTTATAGTCCTTTGGGTA +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSVSIAA*FIVLWV
Trigger: TACCCAAAGGACTATAAATCATGCTGCTATAGAGAC...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTATATCAGGTGTTCAATaGCACCTGATACCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSISGVQ*HLIPSE
Trigger: TTCAGAAGGTATCAGGTGTCATTGAACACCTGATAT...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR GCA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTTTGGGAAAAACGGTTTaGTTTCAAAGTATTTGCCTT +
Preference number: 4 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSLGKTV*FQSICL
Trigger: AAGGCAAATACTTTGAAAGCAAACCGTTTTTCCCAA...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp CCTTTTCACTCTGAAACAAACAAGAAAGTTCTTGGATATGGGCCTCCTTTTCAATTGGGAAAAACGGTTTaGTTTCAAAGTATTTGCCTT +
Preference number: 4 (lower is better)
Translates to: PFHSETNKKVLGYGPPFQLGKTV*FQSICL
Trigger: AAGGCAAATACTTTGAAAGCAAACCGTTTTTCCCAA...TTGAAAAGGAGGCCCATATCCAAGAACTTTCTTGTTTGTTTCAGAGTGAAAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR CCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTGACTTTTCCAGGCATTaGAAGCTGAAATTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSDFSRH*KLKLFQ
Trigger: CTGAAACAATTTCAGCTTCCAATGCCTGGAAAAGTC...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTTCTGTTCTGTTCCATTaGTCTATATATCTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSSVLFH*SIYLFW
Trigger: CCAAAACAGATATATAGACCAATGGAACAGAACAGA...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTGATCACCATTCTAATTaGTGTGACATGGTATCTCAC +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSDHHSN*CDMVSH
Trigger: GTGAGATACCATGTCACACCAATTAGAATGGTGATC...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTACAGAACGTACAGGTTaGTTACATAGGTATACACGT +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSTERTG*LHRYTR
Trigger: ACGTGTATACCTATGTAACCAACCTGTACGTTCTGT...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp AAACATCTTAAAGAGATATTTCTGTTCATAGGCTGGAACTGTGTAGTTCACAACACAGAACGTACAGGTTaGTTACATAGGTATACACGT +
Preference number: 4 (lower is better)
Translates to: KHLKEIFLFIGWNCVVHNTERTG*LHRYTR
Trigger: ACGTGTATACCTATGTAACCAACCTGTACGTTCTGT...GTTGTGAACTACACAGTTCCAGCCTATGAACAGAAATATCTCTTTAAGATGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR TCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTGCAAAAGAGTTCTTCTaGATGACTTCCATCATTTAC +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSAKEFF*MTSIIY
Trigger: GTAAATGATGGAAGTCATTCAGAAGAACTCTTTTGC...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR TCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTATGTACTACTTTTACTaGTTGGGAAAAACGGTTTGC +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSMYYFY*LGKTVC
Trigger: GCAAACCGTTTTTCCCAATCAGTAAAAGTAGTACAT...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR GCA 90 bp AAACATCTTAAAGAGATATTTCTGTTCATAGGCTGGAACTGTGTAGTTCACAACGATTTTCTAGCAACATaGTGGATAAATTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KHLKEIFLFIGWNCVVHNDFLAT*WINCLL
Trigger: CAGGAGACAATTTATCCAGCATGTTGCTAGAAAATC...GTTGTGAACTACACAGTTCCAGCCTATGAACAGAAATATCTCTTTAAGATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTTTAAGACATTCTTCTTaGTTTGCCAGCTTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSLRHSS*FASFFS
Trigger: TGAGAAGAAGCTGGCAAACCAAGAAGAATGTCTTAA...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTAGAACATGCGGTGTTTaGTTTTCTGTTCTTGTGTTA +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSRTCGV*FSVLVL
Trigger: TAACACAAGAACAGAAAACCAAACACCGCATGTTCT...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
3UTR CAA 72 bp ATTTGCCTTTTCACTCTGAAACAAACAAGAAAGTTCTaGGATATGGGCCTCCTTTTCAAATACCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: ICLFTLKQTRKF*DMGLLFKYLLL
Trigger: AAGAAGAAGGTATTTGAAAAGGAGGCCCATATCCAAGAACTTTCTTGTTTGTTTCAGAGTGAAAAGGCAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR CCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTTCTGTTCTGTTCCATTaGTCTATATATCTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSSVLFH*SIYLFW
Trigger: CCAAAACAGATATATAGACCAATGGAACAGAACAGA...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTTGGCCCTTTGTCAGATaGATAGATTGCAAAAATTTT +
Preference number: 4 (lower is better)
Translates to: CRFWILALCQMDRLQKFSWPFVR*IDCKNF
Trigger: AAAATTTTTGCAATCTATCCATCTGACAAAGGGCCA...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CCA 90 bp AAACATCTTAAAGAGATATTTCTGTTCATAGGCTGGAACTGTGTAGTTCACAACACAAATTCACTTGAATaGTGGCTACAAACATCACAA +
Preference number: 4 (lower is better)
Translates to: KHLKEIFLFIGWNCVVHNTNSLE*WLQTSQ
Trigger: TTGTGATGTTTGTAGCCACCATTCAAGTGAATTTGT...GTTGTGAACTACACAGTTCCAGCCTATGAACAGAAATATCTCTTTAAGATGTTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS GCA 90 bp GAGGCGCCACGGCTGCTGCAATGGAAACCGTGGCAATCCTTCTTGTaGTCTGAGTCGGCTAGGAGGGAGCGGGACGCAGGGGGCACTACA +
Preference number: 5 (lower is better)
Translates to: EAPRLLQWKPWQSFL*SESARRERDAGGTT
Trigger: TGTAGTGCCCCCTGCGTCCCGCTCCCTCCTAGCCGACTCAGAGCACAAGAAGGATTGCCACGGTTTCCATTGCAGCAGCCGTGGCGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
ENST00000370566.7
ENST00000394733.2
ENST00000478286.2
ENST00000479890.5
ENST00000488879.6
CDS CCA 90 bp GGCACTACAGTGGGTAGACTAGGAAGGAAGGCAAGGGACGCGAGGTaGGAACCAGGCGAATTCCTAGACCTGCTTGCCGCAGAAGAGTGC +
Preference number: 5 (lower is better)
Translates to: GTTVGRLGRKARDAR*EPGEFLDLLAAEEC
Trigger: GCACTCTTCTGCGGCAAGCAGGTCTAGGAATTCGCCTGGTTCCCACCTCGCGTCCCTTGCCTTCCTTCCTAGTCTACCCACTGTAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000370566.7
ENST00000478286.2
ENST00000479890.5
ENST00000488879.6
CDS GCA 90 bp AGGTGGGAACCAGGCGAATTCCTAGACCTGCTTGCCGCAGAAGAGTaGCCGCTCAAGTGGAACAAAAGCGCAGCTAGTAACCGGCTAGTG +
Preference number: 5 (lower is better)
Translates to: RWEPGEFLDLLAAEE*PLKWNKSAASNRLV
Trigger: CACTAGCCGGTTACTAGCTGCGCTTTTGTTCCACTTGAGCGGGCACTCTTCTGCGGCAAGCAGGTCTAGGAATTCGCCTGGTTCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317336.11
ENST00000370566.7
ENST00000478286.2
CDS GCA 90 bp TCCATCAACCTGGCCCTGAAGCTCCCTAATGGTGTGTTCCTGGTCTaGACACTTCCCCTTGCAGCACTGCAGACTCTCCTGACACTCGTG +
Preference number: 5 (lower is better)
Translates to: SINLALKLPNGVFLV*TLPLAALQTLLTLV
Trigger: CACGAGTGTCAGGAGAGTCTGCAGTGCTGCAAGGGGAAGTGTGCAGACCAGGAACACACCATTAGGGAGCTTCAGGGCCAGGTTGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317336.11
ENST00000359242.7
ENST00000460698.6
CDS CCA 90 bp GGCGAATTCCTAGACCTGCTTGCCGCAGAAGAGTGCCCGCTCAAGTaGAACAAAAGCGCAGCTAGTAACCGGCTAGTGGCTTCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: GEFLDLLAAEECPLK*NKSAASNRLVASLA
Trigger: TGCCAGAGAAGCCACTAGCCGGTTACTAGCTGCGCTTTTGTTCCACTTGAGCGGGCACTCTTCTGCGGCAAGCAGGTCTAGGAATTCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317336.11
ENST00000370566.7
CDS-3UTR CAA 90 bp GCAGAGACTCTGGATGTCTGCCACTTACTAGCTGTGCGACCTTGGGCAAGTTACTCTGCACACTTCCCCTaGCAGCACTGCAGACTCTCC +
Preference number: 5 (lower is better)
Translates to: AETLDVCHLLAVRPWASYSAHFP*QHCRLS
Trigger: GGAGAGTCTGCAGTGCTGCAAGGGGAAGTGTGCAGA...GTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS GCA 90 bp CTTCAAAATCTGGCCCTGAAGCTCCCTAATGGTGTGTTCCTGGTCTaGACACTTCCCCTTGCAGCACTGCAGACTCTCCTGACACTCGTG +
Preference number: 5 (lower is better)
Translates to: LQNLALKLPNGVFLV*TLPLAALQTLLTLV
Trigger: CACGAGTGTCAGGAGAGTCTGCAGTGCTGCAAGGGGAAGTGTGCAGACCAGGAACACACCATTAGGGAGCTTCAGGGCCAGATTTTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294678.6
CDS GCA 90 bp ATCCATATTCTGGCCCTGAAGCTCCCTAATGGTGTGTTCCTGGTCTaGACACTTCCCCTTGCAGCACTGCAGACTCTCCTGACACTCGTG +
Preference number: 5 (lower is better)
Translates to: IHILALKLPNGVFLV*TLPLAALQTLLTLV
Trigger: CACGAGTGTCAGGAGAGTCTGCAGTGCTGCAAGGGGAAGTGTGCAGACCAGGAACACACCATTAGGGAGCTTCAGGGCCAGAATATGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531412.5
CDS-3UTR CAA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTCCGTGGCAATCCTTCTaGTGCTCTGAGTCGGCTAGG +
Preference number: 5 (lower is better)
Translates to: VPWWFAALINPSSTLGISPWQSF*CSESAR
Trigger: CCTAGCCGACTCAGAGCACAAGAAGGATTGCCACGG...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTTCTGCACACTTCCCCTaGCAGCACTGCAGACTCTCC +
Preference number: 5 (lower is better)
Translates to: VPWWFAALINPSSTLGISSAHFP*QHCRLS
Trigger: GGAGAGTCTGCAGTGCTGCAAGGGGAAGTGTGCAGA...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTACGTGCCATGGTGGTTaGCTGCACTCATCAACCCGT +
Preference number: 5 (lower is better)
Translates to: VPWWFAALINPSSTLGISTCHGG*LHSSTR
Trigger: ACGGGTTGATGAGTGCAGCAAACCACCATGGCACGT...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCTCTGGTTCTAGATCCTaGAGGAATCGCCACACTGTC +
Preference number: 5 (lower is better)
Translates to: PWCVMFPALYPCILIVQLSGSRS*RNRHTV
Trigger: GACAGTGTGGCGATTCCTCAAGGATCTAGAACCAGA...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCTTAGAGTATCCTGCCTaGGCACACACAGTGGGAGAT +
Preference number: 5 (lower is better)
Translates to: PWCVMFPALYPCILIVQLLEYPA*AHTVGD
Trigger: ATCTCCCACTGTGTGTGCCAAGGCAGGATACTCTAA...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CAA 90 bp AGCTTCCAGTTGTCTGGCCAATGCTGTATACTCTGCAGATTTCTCTTTAAACTTTCTGCACACTTCCCCTaGCAGCACTGCAGACTCTCC +
Preference number: 5 (lower is better)
Translates to: SFQLSGQCCILCRFLFKLSAHFP*QHCRLS
Trigger: GGAGAGTCTGCAGTGCTGCAAGGGGAAGTGTGCAGA...AAGTTTAAAGAGAAATCTGCAGAGTATACAGCATTGGCCAGACAACTGGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531412.5
CDS-3UTR CAA 90 bp GCAGAGACTCTGGATGTCTGCCACTTACTAGCTGTGCGACCTTGGGCAAGTTACTCTTTTTGCTTAGGATaGTCTTGGTTATGTGAGCTC +
Preference number: 5 (lower is better)
Translates to: AETLDVCHLLAVRPWASYSFCLG*SWLCEL
Trigger: GAGCTCACATAACCAAGACAATCCTAAGCAAAAAGA...GTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CAA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTCCGTGGCAATCCTTCTaGTGCTCTGAGTCGGCTAGG +
Preference number: 5 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSPWQSF*CSESAR
Trigger: CCTAGCCGACTCAGAGCACAAGAAGGATTGCCACGG...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp ACAACTGATGGCATCTTAGAGGCTATGTCAAAAATCTGTGTGTTCTTAAGCACACCGTGGCAATCCTTCTaGTGCTCTGAGTCGGCTAGG +
Preference number: 5 (lower is better)
Translates to: TTDGILEAMSKICVFLSTPWQSF*CSESAR
Trigger: CCTAGCCGACTCAGAGCACAAGAAGGATTGCCACGG...TGTGCTTAAGAACACACAGATTTTTGACATAGCCTCTAAGATGCCATCAGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478286.2
CDS-3UTR CAA 90 bp GCAGAGACTCTGGATGTCTGCCACTTACTAGCTGTGCGACCTTGGGCAAGTTACTCCCATTTGTCAATCTaGGCTTTTATTGCCATTACT +
Preference number: 5 (lower is better)
Translates to: AETLDVCHLLAVRPWASYSHLSI*AFIAIT
Trigger: AGTAATGGCAATAAAAGCCAAGATTGACAAATGGGA...GTAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CAA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCATCATTGATGGGCATTaGGGTTGGCTCCAAGTCTTT +
Preference number: 5 (lower is better)
Translates to: PWCVMFPALYPCILIVQLIIDGH*GWLQVF
Trigger: AAAGACTTGGAGCCAACCCAAATGCCCATCAATGAT...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGATCATCCCCATGAGTaGGCCATGGAAAGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: PISCFSQVCQTADGCRCVDHPHE*AMERVG
Trigger: TCCCACCCTTTCCATGGCCAACTCATGGGGATGATC...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CAA 90 bp GGAAGTAAGCTTTTCAATAGCTCCTGTAAAATGGTCAAGCCTTTGTTTGTAAACCCGTGGCAATCCTTCTaGTGCTCTGAGTCGGCTAGG +
Preference number: 5 (lower is better)
Translates to: GSKLFNSSCKMVKPLFVNPWQSF*CSESAR
Trigger: CCTAGCCGACTCAGAGCACAAGAAGGATTGCCACGG...GTTTACAAACAAAGGCTTGACCATTTTACAGGAGCTATTGAAAAGCTTACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR CAA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCCAAACAAGAAAGTTCTaGGATATGGGCCTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: PWCVMFPALYPCILIVQLQTRKF*DMGLLF
Trigger: GAAAAGGAGGCCCATATCCAAGAACTTTCTTGTTTG...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTACGTGCCATGGTGGTTaGCTGCACTCATCAACCCGT +
Preference number: 5 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSTCHGG*LHSSTR
Trigger: ACGGGTTGATGAGTGCAGCAAACCACCATGGCACGT...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTCCGTGGCAATCCTTCTaGTGCTCTGAGTCGGCTAGG +
Preference number: 5 (lower is better)
Translates to: CRFWILALCQMDRLQKFSPWQSF*CSESAR
Trigger: CCTAGCCGACTCAGAGCACAAGAAGGATTGCCACGG...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTCAAACAAGAAAGTTCTaGGATATGGGCCTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: VPWWFAALINPSSTLGISQTRKF*DMGLLF
Trigger: GAAAAGGAGGCCCATATCCAAGAACTTTCTTGTTTG...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCCATTCTTATTCATTCTaGATTGCAGGTTCCACTTGG +
Preference number: 5 (lower is better)
Translates to: PWCVMFPALYPCILIVQLHSYSF*IAGSTW
Trigger: CCAAGTGGAACCTGCAATCAAGAATGAATAAGAATG...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCTGTTCTTGTGTTAGTTaGCTGAGAATGATGGTTTCC +
Preference number: 5 (lower is better)
Translates to: PWCVMFPALYPCILIVQLCSCVS*LRMMVS
Trigger: GGAAACCATCATTCTCAGCAAACTAACACAAGAACA...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTTTCCACTTGGCTATCTaGGTTTCTAAGCTCTTTACA +
Preference number: 5 (lower is better)
Translates to: VPWWFAALINPSSTLGISFHLAI*VSKLFT
Trigger: TGTAAAGAGCTTAGAAACCAAGATAGCCAAGTGGAA...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTCATTGGAAGCTGAAATaGTTTCAGACAACTTGGCTT +
Preference number: 5 (lower is better)
Translates to: VPWWFAALINPSSTLGISHWKLK*FQTTWL
Trigger: AAGCCAAGTTGTCTGAAACAATTTCAGCTTCCAATG...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTTATTTCAGCTGCTTCTaGCAACTTTTGTACCTGAGT +
Preference number: 5 (lower is better)
Translates to: VPWWFAALINPSSTLGISYFSCF*QLLYLS
Trigger: ACTCAGGTACAAAAGTTGCAAGAAGCAGCTGAAATA...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTTGTTCTTGTGTTAGTTaGCTGAGAATGATGGTTTCC +
Preference number: 5 (lower is better)
Translates to: VPWWFAALINPSSTLGISCSCVS*LRMMVS
Trigger: GGAAACCATCATTCTCAGCAAACTAACACAAGAACA...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp ATTAAGCTGCTGAGGTCATCCACAGATCTGTACATCCATTCTGCACCACCCTATTGTTCTTGTGTTAGTTaGCTGAGAATGATGGTTTCC +
Preference number: 5 (lower is better)
Translates to: IKLLRSSTDLYIHSAPPYCSCVS*LRMMVS
Trigger: GGAAACCATCATTCTCAGCAAACTAACACAAGAACA...ATAGGGTGGTGCAGAATGGATGTACAGATCTGTGGATGACCTCAGCAGCTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CAA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTACGTGCCATGGTGGTTaGCTGCACTCATCAACCCGT +
Preference number: 5 (lower is better)
Translates to: CRFWILALCQMDRLQKFSTCHGG*LHSSTR
Trigger: ACGGGTTGATGAGTGCAGCAAACCACCATGGCACGT...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp CCCTGGTGTGTGATGTTCCCTGCCCTGTATCCATGTATTCTCATTGTTCAACTCTTAGATAAAGACAGGTaGCAAATATCATCTAGCCTC +
Preference number: 5 (lower is better)
Translates to: PWCVMFPALYPCILIVQLLDKDR*QISSSL
Trigger: GAGGCTAGATGATATTTGCAACCTGTCTTTATCTAA...GAGTTGAACAATGAGAATACATGGATACAGGGCAGGGAACATCACACACCAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CAA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGATTGCAGGTTCCACTaGGCTATCTTGGTTTCTAAG +
Preference number: 5 (lower is better)
Translates to: PISCFSQVCQTADGCRCVDCRFH*AILVSK
Trigger: CTTAGAAACCAAGATAGCCAAGTGGAACCTGCAATC...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTCTCTGTTCTGTTCCATaGGTCTATATATCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: VPWWFAALINPSSTLGISLCSVP*VYISVL
Trigger: CAAAACAGATATATAGACCAATGGAACAGAACAGAG...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTATCATTGATGGGCATTaGGGTTGGCTCCAAGTCTTT +
Preference number: 5 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPIIDGH*GWLQVF
Trigger: AAAGACTTGGAGCCAACCCAAATGCCCATCAATGAT...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp GTGCCATGGTGGTTTGCTGCACTCATCAACCCGTCATCTACATTAGGAATTTCTACCCTATTAGGGTACTaGGACAGAAAATACAAAAAG +
Preference number: 5 (lower is better)
Translates to: VPWWFAALINPSSTLGISTLLGY*DRKYKK
Trigger: CTTTTTGTATTTTCTGTCCAAGTACCCTAATAGGGT...AGAAATTCCTAATGTAGATGACGGGTTGATGAGTGCAGCAAACCACCATGGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CAA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTGATTGCAGGTTCCACTaGGCTATCTTGGTTTCTAAG +
Preference number: 5 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSDCRFH*AILVSK
Trigger: CTTAGAAACCAAGATAGCCAAGTGGAACCTGCAATC...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTGACATTCTTCTTGGTTaGCCAGCTTCTTCTCAAGCT +
Preference number: 5 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSDILLG*PASSQA
Trigger: AGCTTGAGAAGAAGCTGGCAAACCAAGAAGAATGTC...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTCTTAAGACATTCTTCTaGGTTTGCCAGCTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPLKTFF*VCQLLL
Trigger: GAGAAGAAGCTGGCAAACCAAGAAGAATGTCTTAAG...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp AGCTTCCAGTTGTCTGGCCAATGCTGTATACTCTGCAGATTTCTCTTTAAACTTCTTAAGACATTCTTCTaGGTTTGCCAGCTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: SFQLSGQCCILCRFLFKLLKTFF*VCQLLL
Trigger: GAGAAGAAGCTGGCAAACCAAGAAGAATGTCTTAAG...AAGTTTAAAGAGAAATCTGCAGAGTATACAGCATTGGCCAGACAACTGGAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531412.5
CDS-3UTR CAA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGTTATTCAGTCTATCATaGATGGGCATTTGGGTTGGC +
Preference number: 5 (lower is better)
Translates to: PISCFSQVCQTADGCRCVLFSLS*MGIWVG
Trigger: GCCAACCCAAATGCCCATCAATGATAGACTGAATAA...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGAACATGCGGTGTTaGGTTTTCTGTTCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: PISCFSQVCQTADGCRCVENMRC*VFCSCV
Trigger: AACACAAGAACAGAAAACCAAACACCGCATGTTCTC...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTTTCCACTTGGCTATCTaGGTTTCTAAGCTCTTTACA +
Preference number: 5 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPFHLAI*VSKLFT
Trigger: TGTAAAGAGCTTAGAAACCAAGATAGCCAAGTGGAA...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp TCTGTAGTCGTTCATGTACTACTTTTACTGATTGGGAAAAACGGTTTGCTTTCAGATTGCAGGTTCCACTaGGCTATCTTGGTTTCTAAG +
Preference number: 5 (lower is better)
Translates to: SVVVHVLLLLIGKNGLLSDCRFH*AILVSK
Trigger: CTTAGAAACCAAGATAGCCAAGTGGAACCTGCAATC...TGAAAGCAAACCGTTTTTCCCAATCAGTAAAAGTAGTACATGAACGACTACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR CAA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGCATTGGAAGCTGAAATaGTTTCAGACAACTTGGCTT +
Preference number: 5 (lower is better)
Translates to: PISCFSQVCQTADGCRCVHWKLK*FQTTWL
Trigger: AAGCCAAGTTGTCTGAAACAATTTCAGCTTCCAATG...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp ATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTCATTGGAAGCTGAAATaGTTTCAGACAACTTGGCTT +
Preference number: 5 (lower is better)
Translates to: IYPVMGLLGQMVFLVLDPHWKLK*FQTTWL
Trigger: AAGCCAAGTTGTCTGAAACAATTTCAGCTTCCAATG...AGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp TGCCTTTTCACTCTGAAACAAACAAGAAAGTTCTTGGATATGGGCCTCCTTTTCCATTGGAAGCTGAAATaGTTTCAGACAACTTGGCTT +
Preference number: 5 (lower is better)
Translates to: CLFTLKQTRKFLDMGLLFHWKLK*FQTTWL
Trigger: AAGCCAAGTTGTCTGAAACAATTTCAGCTTCCAATG...GAAAAGGAGGCCCATATCCAAGAACTTTCTTGTTTGTTTCAGAGTGAAAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR CAA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGTATTTCAGCTGCTTCTaGCAACTTTTGTACCTGAGT +
Preference number: 5 (lower is better)
Translates to: PISCFSQVCQTADGCRCVYFSCF*QLLYLS
Trigger: ACTCAGGTACAAAAGTTGCAAGAAGCAGCTGAAATA...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTCTTAAGACATTCTTCTaGGTTTGCCAGCTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSLKTFF*VCQLLL
Trigger: GAGAAGAAGCTGGCAAACCAAGAAGAATGTCTTAAG...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGTGATGCCTACAGCTTaGTTCTTTTTGCTTAGGATT +
Preference number: 5 (lower is better)
Translates to: PISCFSQVCQTADGCRCVVMPTA*FFLLRI
Trigger: AATCCTAAGCAAAAAGAACAAAGCTGTAGGCATCAC...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp CCCATTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGTCTATATATCTGTTTaGGCACCAGTACCATGCTAT +
Preference number: 5 (lower is better)
Translates to: PISCFSQVCQTADGCRCVVYISV*APVPCY
Trigger: ATAGCATGGTACTGGTGCCAAAACAGATATATAGAC...CACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAATGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTTTATTCAGTCTATCATaGATGGGCATTTGGGTTGGC +
Preference number: 5 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSLFSLS*MGIWVG
Trigger: GCCAACCCAAATGCCCATCAATGATAGACTGAATAA...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTGAGAACATGCGGTGTTaGGTTTTCTGTTCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSENMRC*VFCSCV
Trigger: AACACAAGAACAGAAAACCAAACACCGCATGTTCTC...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS TCA 90 bp TTTTCAATGGTGTCCTTAAATAGTGGCAAAAGCAATTCTACAGAATaGGTTACCAACTCCGCTTCCTTAAGTGTTGCTTCCAATTCAGTC +
Preference number: 5 (lower is better)
Translates to: FSMVSLNSGKSNSTE*VTNSASLSVASNSV
Trigger: GACTGAATTGGAAGCAACACTTAAGGAAGCGGAGTTGGTAACTCATTCTGTAGAATTGCTTTTGCCACTATTTAAGGACACCATTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
ENST00000370566.7
ENST00000394733.2
CDS-3UTR CAA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTTTCCACTTGGCTATCTaGGTTTCTAAGCTCTTTACA +
Preference number: 5 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSFHLAI*VSKLFT
Trigger: TGTAAAGAGCTTAGAAACCAAGATAGCCAAGTGGAA...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp CCTTTTCACTCTGAAACAAACAAGAAAGTTCTTGGATATGGGCCTCCTTTTCAACATTCTTATTCATTCTaGATTGCAGGTTCCACTTGG +
Preference number: 5 (lower is better)
Translates to: PFHSETNKKVLGYGPPFQHSYSF*IAGSTW
Trigger: CCAAGTGGAACCTGCAATCAAGAATGAATAAGAATG...TTGAAAAGGAGGCCCATATCCAAGAACTTTCTTGTTTGTTTCAGAGTGAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR CAA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTGACATTCTTCTTGGTTaGCCAGCTTCTTCTCAAGCT +
Preference number: 5 (lower is better)
Translates to: CRFWILALCQMDRLQKFSDILLG*PASSQA
Trigger: AGCTTGAGAAGAAGCTGGCAAACCAAGAAGAATGTC...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp AAACATCTTAAAGAGATATTTCTGTTCATAGGCTGGAACTGTGTAGTTCACAACGACATTCTTCTTGGTTaGCCAGCTTCTTCTCAAGCT +
Preference number: 5 (lower is better)
Translates to: KHLKEIFLFIGWNCVVHNDILLG*PASSQA
Trigger: AGCTTGAGAAGAAGCTGGCAAACCAAGAAGAATGTC...GTTGTGAACTACACAGTTCCAGCCTATGAACAGAAATATCTCTTTAAGATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CAA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTTTAAGAGTGCTTATTTaGATCATCCCCATGAGTTGG +
Preference number: 5 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSLRVLI*IIPMSW
Trigger: CCAACTCATGGGGATGATCAAAATAAGCACTCTTAA...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CAA 90 bp TTTCTTGTTTTTCTCAGGTATGTCAAACAGCAGATGGTTGTAGATGTGTGGAGTAGGAGTCACTATTACTaGATCCTTTGTAAACCACGT +
Preference number: 5 (lower is better)
Translates to: FLVFLRYVKQQMVVDVWSRSHYY*ILCKPR
Trigger: ACGTGGTTTACAAAGGATCAAGTAATAGTGACTCCT...ACTCCACACATCTACAACCATCTGCTGTTTGACATACCTGAGAAAAACAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CAA 90 bp CCCTTTTATGAATTTGGATCTGTAGTCGTTCATGTACTACTTTTACTGATTGGGTTCCACTTGGCTATCTaGGTTTCTAAGCTCTTTACA +
Preference number: 5 (lower is better)
Translates to: PFYEFGSVVVHVLLLLIGFHLAI*VSKLFT
Trigger: TGTAAAGAGCTTAGAAACCAAGATAGCCAAGTGGAA...CCCAATCAGTAAAAGTAGTACATGAACGACTACAGATCCAAATTCATAAAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR CAA 90 bp GGAAGTAAGCTTTTCAATAGCTCCTGTAAAATGGTCAAGCCTTTGTTTGTAAACTATTTCAGCTGCTTCTaGCAACTTTTGTACCTGAGT +
Preference number: 5 (lower is better)
Translates to: GSKLFNSSCKMVKPLFVNYFSCF*QLLYLS
Trigger: ACTCAGGTACAAAAGTTGCAAGAAGCAGCTGAAATA...GTTTACAAACAAAGGCTTGACCATTTTACAGGAGCTATTGAAAAGCTTACTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488879.6
CDS-3UTR CAA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTCTTAAGACATTCTTCTaGGTTTGCCAGCTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: CRFWILALCQMDRLQKFSLKTFF*VCQLLL
Trigger: GAGAAGAAGCTGGCAAACCAAGAAGAATGTCTTAAG...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp AAACATCTTAAAGAGATATTTCTGTTCATAGGCTGGAACTGTGTAGTTCACAACTTATTCAGTCTATCATaGATGGGCATTTGGGTTGGC +
Preference number: 5 (lower is better)
Translates to: KHLKEIFLFIGWNCVVHNLFSLS*MGIWVG
Trigger: GCCAACCCAAATGCCCATCAATGATAGACTGAATAA...GTTGTGAACTACACAGTTCCAGCCTATGAACAGAAATATCTCTTTAAGATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS-3UTR CAA 90 bp TGTAGATTCTGGATATTGGCCCTTTGTCAGATGGATAGATTGCAAAAATTTTCTCATTCTTATTCATTCTaGATTGCAGGTTCCACTTGG +
Preference number: 5 (lower is better)
Translates to: CRFWILALCQMDRLQKFSHSYSF*IAGSTW
Trigger: CCAAGTGGAACCTGCAATCAAGAATGAATAAGAATG...AGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCCAATATCCAGAATCTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
CDS-3UTR CAA 90 bp AAACATCTTAAAGAGATATTTCTGTTCATAGGCTGGAACTGTGTAGTTCACAACCATTCTTATTCATTCTaGATTGCAGGTTCCACTTGG +
Preference number: 5 (lower is better)
Translates to: KHLKEIFLFIGWNCVVHNHSYSF*IAGSTW
Trigger: CCAAGTGGAACCTGCAATCAAGAATGAATAAGAATG...GTTGTGAACTACACAGTTCCAGCCTATGAACAGAAATATCTCTTTAAGATGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359242.7
CDS CAA 90 bp TCAGAGGCGCCACGGCTGCTGCAATGGAAACCGTGGCAATCCTTCTaGTGCTCTGAGTCGGCTAGGAGGGAGCGGGACGCAGGGGGCACT +
Preference number: 6 (lower is better)
Translates to: SEAPRLLQWKPWQSF*CSESARRERDAGGT
Trigger: AGTGCCCCCTGCGTCCCGCTCCCTCCTAGCCGACTCAGAGCACAAGAAGGATTGCCACGGTTTCCATTGCAGCAGCCGTGGCGCCTCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
ENST00000370566.7
ENST00000394733.2
ENST00000478286.2
ENST00000479890.5
ENST00000488879.6
CDS CCA 72 bp GGGTCAGAGGCGCCACGGCTGCTGCAATGGAAACCGTaGCAATCCTTCTTGTGCTCTGAGTCGGCTAGGAGG +
Preference number: 6 (lower is better)
Translates to: GSEAPRLLQWKP*QSFLCSESARR
Trigger: CCTCCTAGCCGACTCAGAGCACAAGAAGGATTGCCACGGTTTCCATTGCAGCAGCCGTGGCGCCTCTGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
ENST00000370566.7
ENST00000394733.2
ENST00000478286.2
ENST00000479890.5
ENST00000488879.6
CDS CAA 72 bp CCACGGCTGCTGCAATGGAAACCGTGGCAATCCTTCTaGTGCTCTGAGTCGGCTAGGAGGGAGCGGGACGCA +
Preference number: 6 (lower is better)
Translates to: PRLLQWKPWQSF*CSESARRERDA
Trigger: TGCGTCCCGCTCCCTCCTAGCCGACTCAGAGCACAAGAAGGATTGCCACGGTTTCCATTGCAGCAGCCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
ENST00000370566.7
ENST00000394733.2
ENST00000478286.2
ENST00000479890.5
ENST00000488879.6
CDS GCA 72 bp CTGGCCCTGAAGCTCCCTAATGGTGTGTTCCTGGTCTaGACACTTCCCCTTGCAGCACTGCAGACTCTCCTG +
Preference number: 6 (lower is better)
Translates to: LALKLPNGVFLV*TLPLAALQTLL
Trigger: CAGGAGAGTCTGCAGTGCTGCAAGGGGAAGTGTGCAGACCAGGAACACACCATTAGGGAGCTTCAGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
ENST00000460698.6
ENST00000531412.5
CDS CCA 72 bp CTAGACCTGCTTGCCGCAGAAGAGTGCCCGCTCAAGTaGAACAAAAGCGCAGCTAGTAACCGGCTAGTGGCT +
Preference number: 6 (lower is better)
Translates to: LDLLAAEECPLK*NKSAASNRLVA
Trigger: AGCCACTAGCCGGTTACTAGCTGCGCTTTTGTTCCACTTGAGCGGGCACTCTTCTGCGGCAAGCAGGTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317336.11
ENST00000370566.7
ENST00000478286.2
CDS GCA 72 bp CCAGGCGAATTCCTAGACCTGCTTGCCGCAGAAGAGTaGCCGCTCAAGTGGAACAAAAGCGCAGCTAGTAAC +
Preference number: 6 (lower is better)
Translates to: PGEFLDLLAAEE*PLKWNKSAASN
Trigger: GTTACTAGCTGCGCTTTTGTTCCACTTGAGCGGGCACTCTTCTGCGGCAAGCAGGTCTAGGAATTCGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317336.11
ENST00000370566.7
ENST00000478286.2
CDS CCA 72 bp TGTGCATTCAGTGAGCTATCTTTATGTCTGTATAACTaGAGGACGCTTGCTCTGGCTGACCTCTTCTTCACA +
Preference number: 6 (lower is better)
Translates to: CAFSELSLCLYN*RTLALADLFFT
Trigger: TGTGAAGAAGAGGTCAGCCAGAGCAAGCGTCCTCCAGTTATACAGACATAAAGATAGCTCACTGAATGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463933.5
CDS CAA 72 bp AGGACGCTTGCTCTGGCTGACCTCTTCTTCACATTATaGCCTTGCTCTGACTTCTCAATCCTTCTCTACATT +
Preference number: 6 (lower is better)
Translates to: RTLALADLFFTL*PCSDFSILLYI
Trigger: AATGTAGAGAAGGATTGAGAAGTCAGAGCAAGGCAATAATGTGAAGAAGAGGTCAGCCAGAGCAAGCGTCCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463933.5
CDS TCA 72 bp GTGTCCTTAAATAGTGGCAAAAGCAATTCTACAGAATaGGTTACCAACTCCGCTTCCTTAAGTGTTGCTTCC +
Preference number: 6 (lower is better)
Translates to: VSLNSGKSNSTE*VTNSASLSVAS
Trigger: GGAAGCAACACTTAAGGAAGCGGAGTTGGTAACTCATTCTGTAGAATTGCTTTTGCCACTATTTAAGGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294678.6
ENST00000317336.11
ENST00000359242.7
ENST00000370566.7
ENST00000394733.2
CDS TCA 72 bp TTTTCCTCTTCCAGAGAAAGCTTTGTCAGAAGATTGTaGTTTCCATCAACCCATGCCAAGACAGAATATTCT +
Preference number: 6 (lower is better)
Translates to: FSSSRESFVRRL*FPSTHAKTEYS
Trigger: AGAATATTCTGTCTTGGCATGGGTTGATGGAAATCACAATCTTCTGACAAAGCTTTCTCTGGAAGAGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294678.6
ENST00000462648.5
ENST00000531412.5