RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ODF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000136811

Ensembl transcript IDs: ENST00000351030.7, ENST00000372791.7, ENST00000372807.9, ENST00000372814.7, ENST00000393527.7, ENST00000393533.6, ENST00000421776.6, ENST00000432065.6, ENST00000434106.7, ENST00000444119.6, ENST00000444993.6, ENST00000446274.5, ENST00000448249.7, ENST00000469582.6, ENST00000470061.5, ENST00000483070.2, ENST00000488909.1, ENST00000497812.6, ENST00000546203.5, ENST00000604420.5

Found 866 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTaGCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCC +
Preference number: 1 (lower is better)
Translates to: FFTGRGKPPGFSAMA*QLWSSYGFHQGSRP
Trigger: GGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
3UTR TCA 90 bp ATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTaGGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACAC +
Preference number: 1 (lower is better)
Translates to: IVKCLGASGLKETWE*EVCTELGKGALGKH
Trigger: GTGTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
3UTR TCA 90 bp AGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTaGCTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCT +
Preference number: 1 (lower is better)
Translates to: SKFKACRGNFNTSNR*LYQEGENQVLPASP
Trigger: AGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
3UTR-3UTR GCA 90 bp GAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACACCACACTTGTGCCCAGGACGACTTCCTaGTGGTTTAGGTCAGAAAAA +
Preference number: 2 (lower is better)
Translates to: ERFALSLGREPWENTTLVPRTTS*WFRSEK
Trigger: TTTTTCTGACCTAAACCAGCAGGAAGTCGTCCTGGG...CACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
3UTR-3UTR GCA 90 bp GGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGACCCAGGACGACTTCCTaGTGGTTTAGGTCAGAAAAA +
Preference number: 2 (lower is better)
Translates to: GQVASKKLGSERFALSLGPRTTS*WFRSEK
Trigger: TTTTTCTGACCTAAACCAGCAGGAAGTCGTCCTGGG...TCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
3UTR-3UTR CCA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTATGGCTTGGCAACTCTaGAGTTCCTATGGCTTCCAT +
Preference number: 2 (lower is better)
Translates to: ASKKLGSERFALSLGREPMAWQL*SSYGFH
Trigger: ATGGAAGCCATAGGAACTCCAGAGTTGCCAAGCCAT...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
3UTR-3UTR CCA 90 bp TCGAGGGTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGACAGGCTTCTCAGCTATaGCTTGGCAACTCTGGAGTT +
Preference number: 2 (lower is better)
Translates to: SRVYCEVLGGKWPQRNLGQASQL*LGNSGV
Trigger: AACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTG...TCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGACCCTCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
3UTR-3UTR GCA 90 bp GAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACACCACACTTGTGTCCTGCTTCACCTTCTaGTGCTTTTGGGACTTTTCT +
Preference number: 2 (lower is better)
Translates to: ERFALSLGREPWENTTLVSCFTF*CFWDFS
Trigger: AGAAAAGTCCCAAAAGCAGCAGAAGGTGAAGCAGGA...CACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
3UTR-3UTR CCA 90 bp GGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGATTCTCAGCTATGGCTTaGCAACTCTGGAGTTCCTAT +
Preference number: 2 (lower is better)
Translates to: GQVASKKLGSERFALSLGFSAMA*QLWSSY
Trigger: ATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAA...TCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
3UTR CAA 90 bp CAAGTGGCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTaGGGAAGGGAGCCTTGGGAAAACACCACACTTGTGAAATCAGAA +
Preference number: 2 (lower is better)
Translates to: QVASKKLGSERFALS*GREPWENTTLVKSE
Trigger: TTCTGATTTCACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
3UTR-3UTR GCA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACTCCTGCTTCACCTTCTaGTGCTTTTGGGACTTTTCT +
Preference number: 2 (lower is better)
Translates to: KLGSERFALSLGREPWENSCFTF*CFWDFS
Trigger: AGAAAAGTCCCAAAAGCAGCAGAAGGTGAAGCAGGA...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
3UTR-3UTR CCA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACTTCTCAGCTATGGCTTaGCAACTCTGGAGTTCCTAT +
Preference number: 2 (lower is better)
Translates to: KLGSERFALSLGREPWENFSAMA*QLWSSY
Trigger: ATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAA...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
3UTR-3UTR CCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCACAGGCTTCTCAGCTATaGCTTGGCAACTCTGGAGTT +
Preference number: 2 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPQASQL*LGNSGV
Trigger: AACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTG...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
3UTR-3UTR GCA 90 bp GTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAAAACCAAGTGCTTCCTaGTTCACCTTCTGCTGCTTT +
Preference number: 2 (lower is better)
Translates to: VYCEVLGGKWPQRNLGVRKPSAS*FTFCCF
Trigger: AAAGCAGCAGAAGGTGAAGCAGGAAGCACTTGGTTT...TCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
3UTR-3UTR CCA 90 bp TCGAGGGTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAACCTTCTGCTGCTTTTaGGACTTTTCTAGAGCTAGT +
Preference number: 2 (lower is better)
Translates to: SRVYCEVLGGKWPQRNLGTFCCF*DFSRAS
Trigger: ACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGAAGGT...TCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGACCCTCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
3UTR-3UTR TCA 90 bp CAGGCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAGTGAGAGGTTTGCACTaGGCTTGGGAAGGGAGCCTT +
Preference number: 2 (lower is better)
Translates to: QAPSTLKMSTGCPAAFYLVRGLH*AWEGSL
Trigger: AAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCAC...TAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
3UTR-3UTR CCA 90 bp CAGGCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTACAGGCTTCTCAGCTATaGCTTGGCAACTCTGGAGTT +
Preference number: 2 (lower is better)
Translates to: QAPSTLKMSTGCPAAFYLQASQL*LGNSGV
Trigger: AACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTG...TAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
3UTR-3UTR CCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGATGGCTTGGCAACTCTaGAGTTCCTATGGCTTCCAT +
Preference number: 2 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKMAWQL*SSYGFH
Trigger: ATGGAAGCCATAGGAACTCCAGAGTTGCCAAGCCAT...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
3UTR-3UTR GCA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACAAACCAAGTGCTTCCTaGTTCACCTTCTGCTGCTTT +
Preference number: 2 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDKPSAS*FTFCCF
Trigger: AAAGCAGCAGAAGGTGAAGCAGGAAGCACTTGGTTT...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
3UTR-3UTR GCA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTGCTTCACCTTCTGCTaGTTTTGGGACTTTTCTAGA +
Preference number: 2 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDCFTFC*FWDFSR
Trigger: TCTAGAAAAGTCCCAAAAGCAGCAGAAGGTGAAGCA...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
3UTR-3UTR GCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTGCTTCACCTTCTGCTaGTTTTGGGACTTTTCTAGA +
Preference number: 2 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCCFTFC*FWDFSR
Trigger: TCTAGAAAAGTCCCAAAAGCAGCAGAAGGTGAAGCA...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
3UTR-3UTR CCA 90 bp CCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCATTATGGCTTGGCAACTCTaGAGTTCCTATGGCTTCCAT +
Preference number: 2 (lower is better)
Translates to: PSTLKMSTGCPAAFYLIIMAWQL*SSYGFH
Trigger: ATGGAAGCCATAGGAACTCCAGAGTTGCCAAGCCAT...AATGATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
3UTR-3UTR CCA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACACCTTCTGCTGCTTTTaGGACTTTTCTAGAGCTAGT +
Preference number: 2 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDTFCCF*DFSRAS
Trigger: ACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGAAGGT...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
3UTR-3UTR GCA 90 bp CCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCATTTGCTTCACCTTCTGCTaGTTTTGGGACTTTTCTAGA +
Preference number: 2 (lower is better)
Translates to: PSTLKMSTGCPAAFYLIICFTFC*FWDFSR
Trigger: TCTAGAAAAGTCCCAAAAGCAGCAGAAGGTGAAGCA...AATGATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
3UTR CCA 72 bp AAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTaGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCC +
Preference number: 3 (lower is better)
Translates to: KPPGFSAMAWQL*SSYGFHQGSRP
Trigger: GGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
3UTR CCA 72 bp CTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATaGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGC +
Preference number: 3 (lower is better)
Translates to: LLSYGLATLEFL*LPSGLQALISG
Trigger: GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
3UTR CCA 72 bp GGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTaGCAACTCTGGAGTTCCTATGGCTTCCATCAGGGC +
Preference number: 3 (lower is better)
Translates to: GRGKPPGFSAMA*QLWSSYGFHQG
Trigger: GCCCTGATGGAAGCCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
3UTR CCA 72 bp CCCTCGAGGGTCTATTGTGAAGTGCTTGGGGGCAAGTaGCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCAC +
Preference number: 3 (lower is better)
Translates to: PSRVYCEVLGGK*PQRNLGVRGLH
Trigger: GTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGACCCTCGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
3UTR-3UTR CAA 90 bp TCGAGGGTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGACTTGGGAAGGGAGCCTaGGGAAAACACCACACTTGT +
Preference number: 3 (lower is better)
Translates to: SRVYCEVLGGKWPQRNLGLGKGA*GKHHTC
Trigger: ACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAG...TCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGACCCTCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
3UTR TCA 72 bp AAGGCCAAATGGACACAAGCCCTCGAGGGTCTATTGTaGAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTT +
Preference number: 3 (lower is better)
Translates to: KAKWTQALEGLL*SAWGQVASKKL
Trigger: AAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGACCCTCGAGGGCTTGTGTCCATTTGGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
3UTR-3UTR CAA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCTTCTCAGCTATGGCTaGGCAACTCTGGAGTTCCTA +
Preference number: 3 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNLLSYG*ATLEFL
Trigger: TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAG...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
3UTR-3UTR CAA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCCTTCTCAGCTATGGCTaGGCAACTCTGGAGTTCCTA +
Preference number: 3 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCLLSYG*ATLEFL
Trigger: TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAG...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
3UTR-3UTR CAA 90 bp CCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCATTAGGTTTGCACTGAGCTaGGGAAGGGAGCCTTGGGAA +
Preference number: 3 (lower is better)
Translates to: PSTLKMSTGCPAAFYLIIRFALS*GREPWE
Trigger: TTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCT...AATGATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
3UTR TCA 72 bp AAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTaGCTATATCAGGAAGGAGAAAACCAAGTGCTTCCT +
Preference number: 3 (lower is better)
Translates to: KACRGNFNTSNR*LYQEGENQVLP
Trigger: AGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCAGGCGCGCTTTCTCTaGGTCGGCCTCCGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFQARFL*VGLRQP
Trigger: CGGCTGGCGGAGGCCGACTCAGAGAAAGCGCGCCTG...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCGGGCAGGCTTGTCAATaGGCCTCTCAAGGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: ATLEFLWLPSGLQALISGGQACQ*ASQGAR
Trigger: CCGGGCCCCTTGAGAGGCTCATTGACAAGCCTGCCC...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTACGGAGGCCAGGGTCGTaGCATGGAGACGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLRRPGS*HGDAAA
Trigger: CGCCGCGGCGTCTCCATGGCACGACCCTGGCCTCCG...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCCAGGAGCGACACGGCTaGGCCCAGAAACGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: ATLEFLWLPSGLQALISGQERHG*AQKRRL
Trigger: AAGGCGGCGTTTCTGGGCGCAGCCGTGTCGCTCCTG...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCCCCCGGGAGCCGCTTaGGTTTCGCCATCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFPPGAA*VSPSRP
Trigger: GGGCCTCGATGGCGAAACCCAAGCGGCTCCCGGGGG...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000351030.7
CDS-3UTR CCA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCTCCAGCTTGTCCCCCTaGTGTTCGATCCGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: ATLEFLWLPSGLQALISGSSLSP*CSIRLR
Trigger: GCGCAGCCGGATCGAACACCAGGGGGACAAGCTGGA...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCCAGGCGCGCTTTCTCTaGGTCGGCCTCCGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLQARFL*VGLRQP
Trigger: CGGCTGGCGGAGGCCGACTCAGAGAAAGCGCGCCTG...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTAGAAAGGTGAAGCCCTaGCCGCGGGCGGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: ASKKLGSERFALSLGREPRKVKP*PRAAEE
Trigger: CTCCTCTGCCGCCCGCGGGCAGGGCTTCACCTTTCT...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434106.7
CDS-3UTR TCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGGGGCAGGCTTGTCAATaGGCCTCTCAAGGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWGQACQ*ASQGAR
Trigger: CCGGGCCCCTTGAGAGGCTCATTGACAAGCCTGCCC...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGTGGGTCAGCAGGCTCTaGTCAGGGGGACCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWWVSRL*SGGPRG
Trigger: CCCTCTGGGTCCCCCTGAGCAGAGCCTGCTGACCCA...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGATCCAGCTTGTCCCCCTaGTGTTCGATCCGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: GQVASKKLGSERFALSLGSSLSP*CSIRLR
Trigger: GCGCAGCCGGATCGAACACCAGGGGGACAAGCTGGA...TCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTAGCCGCAGCTGGGACTaGTGGATTGCCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ASKKLGSERFALSLGREPSRSWD*WIASSL
Trigger: GAGGGAGGAGGCAATCCACCAGTCCCAGCTGCGGCT...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTCCTCCAGCCGCAGCTaGGACTGGTGGATTGCCTCC +
Preference number: 4 (lower is better)
Translates to: ASKKLGSERFALSLGREPSSSRS*DWWIAS
Trigger: GGAGGCAATCCACCAGTCCCAGCTGCGGCTGGAGGA...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCCCACCAGCTTGGACATaGGGCACTCCTTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: ATLEFLWLPSGLQALISGPPAWT*GTPSPV
Trigger: AACAGGAGAAGGAGTGCCTCATGTCCAAGCTGGTGG...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGCAGGCGCGCTTTCTCTaGGTCGGCCTCCGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLQARFL*VGLRQP
Trigger: CGGCTGGCGGAGGCCGACTCAGAGAAAGCGCGCCTG...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACACCACACTTGTGCCGGCTGCGCAGGTCTaGTATGATGGCTGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: ERFALSLGREPWENTTLVPAAQV*YDGCEV
Trigger: GACCTCACAGCCATCATATCAGACCTGCGCAGCCGG...CACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTGTGGATTCTCCCACTTaGATCCCACAGGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASKKLGSERFALSLGREPVDSPT*IPQAGQ
Trigger: CTGCCCGGCCTGTGGGATGCAAGTGGGAGAATCCAC...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCGTGGATTCTCCCACTTaGATCCCACAGGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFVDSPT*IPQAGQ
Trigger: CTGCCCGGCCTGTGGGATGCAAGTGGGAGAATCCAC...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTTCAAGGCCATGACCTaGTTGGCAGCCGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: ASKKLGSERFALSLGREPFKAMT*LAAAAP
Trigger: TGGGGCTGCGGCTGCCAAGCAGGTCATGGCCTTGAA...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTACTGAGGCCTTCAGCTaGTGGACCTCGAGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: ASKKLGSERFALSLGREPTEAFS*WTSRCA
Trigger: GGCACACCTCGAGGTCCAGCAGCTGAAGGCCTCAGT...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACGCATGCTGCGGTTGGTaGTCTCGGACTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KLGSERFALSLGREPWENACCGW*SRTAPG
Trigger: GCCTGGAGCAGTCCGAGAGCACCAACCGCAGCATGC...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCCGTAGTTCTGCATGCTaGGGTTGGTGCTCTCGGACT +
Preference number: 4 (lower is better)
Translates to: ATLEFLWLPSGLQALISGRSSAC*GWCSRT
Trigger: AGTCCGAGAGCACCAACCGCAGCATGCAGAACTACG...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCGGGTCTATTGTGAAGTaGTTGGGGGCAAGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ATLEFLWLPSGLQALISGGSIVK*LGASGL
Trigger: GAGGCCACTTGCCCCCAAGCACTTCACAATAGACCC...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGATGGGTCAGCAGGCTCTaGTCAGGGGGACCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: VYCEVLGGKWPQRNLGVRWVSRL*SGGPRG
Trigger: CCCTCTGGGTCCCCCTGAGCAGAGCCTGCTGACCCA...TCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGGCCAGGGTCGTGCCATaGAGACGCCGCGGCGGATGC +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLARVVP*RRRGGC
Trigger: GCATCCGCCGCGGCGTCTCCATGGCACGACCCTGGC...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACACCACACTTGTGTCGGCTCGCTCCTTCTaGGCTCGGATGGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ERFALSLGREPWENTTLVSARSF*ARMAFF
Trigger: GAAGAAGGCCATCCGAGCCCAGAAGGAGCGAGCCGA...CACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCGCAGCTGGGACTGGTaGATTGCCTCCTCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFRSWDW*IASSLL
Trigger: CAAGAGGGAGGAGGCAATCCACCAGTCCCAGCTGCG...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGAGCCGCAGCTGGGACTaGTGGATTGCCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWSRSWD*WIASSL
Trigger: GAGGGAGGAGGCAATCCACCAGTCCCAGCTGCGGCT...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TCGAGGGTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGATCCTCCAGCCGCAGCTaGGACTGGTGGATTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SRVYCEVLGGKWPQRNLGSSSRS*DWWIAS
Trigger: GGAGGCAATCCACCAGTCCCAGCTGCGGCTGGAGGA...TCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGACCCTCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGCGGCTCCGCCGCAGCTaGCTCAATTCCGTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: HWERKTTRLLSYGLATLERLRRS*LNSVLV
Trigger: AACCAAAACGGAATTGAGCCAGCTGCGGCGGAGCCG...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGACACACGATGGAAACCTaGGGGAGCCGCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: GQVASKKLGSERFALSLGHTMET*GSRLRM
Trigger: CATCCTCAGGCGGCTCCCCCAGGTTTCCATCGTGTG...TCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACCACAGGCCGGGCAGATaGTTTTCCAGGGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: KLGSERFALSLGREPWENHRPGR*FSRGHP
Trigger: TGGATGCCCCCTGGAAAATCATCTGCCCGGCCTGTG...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR TCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCGGGTTGGCAGTTGGATaGAAACTTGGGAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFGLAVG*KLGRRS
Trigger: GGAGCGCCTCCCAAGTTTTCATCCAACTGCCAACCC...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGTTCAAGGCCATGACCTaGTTGGCAGCCGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWFKAMT*LAAAAP
Trigger: TGGGGCTGCGGCTGCCAAGCAGGTCATGGCCTTGAA...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCTTTGGACCGAAGCTGTaGCTGCAAATGCCCACGCAT +
Preference number: 4 (lower is better)
Translates to: ATLEFLWLPSGLQALISGFGPKL*LQMPTH
Trigger: ATGCGTGGGCATTTGCAGGCACAGCTTCGGTCCAAA...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGCTGGGACTGGTGGATTaGCTCCTCCCTCTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: HWERKTTRLLSYGLATLELGLVD*LLPLGN
Trigger: ATTGCCAAGAGGGAGGAGGCAATCCACCAGTCCCAG...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTGGTGCTCTCGGACTaGTCCAGGCGATCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: HWERKTTRLLSYGLATLELVLSD*SRRSFR
Trigger: CCTGAAAGATCGCCTGGAGCAGTCCGAGAGCACCAA...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGCATGCTGCGGTTGGTaGTCTCGGACTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSACCGW*SRTAPG
Trigger: GCCTGGAGCAGTCCGAGAGCACCAACCGCAGCATGC...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCAGATGCAGTCTGGCTCTaGCAGCGGCTCCTCCCCGCT +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPDAVWL*QRLLPA
Trigger: AGCGGGGAGGAGCCGCTGCCAGAGCCAGACTGCATC...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000351030.7
CDS-3UTR CCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATCGGCTCGCTCCTTCTaGGCTCGGATGGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLSARSF*ARMAFF
Trigger: GAAGAAGGCCATCCGAGCCCAGAAGGAGCGAGCCGA...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGAGGCCTTCAGCTGCTaGACCTCGAGGTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSEAFSC*TSRCAW
Trigger: CCAGGCACACCTCGAGGTCCAGCAGCTGAAGGCCTC...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACCCCTGCAGTTGGTCTTaGCACTCAGCCAGCTTCGCC +
Preference number: 4 (lower is better)
Translates to: KLGSERFALSLGREPWENPCSWS*HSASFA
Trigger: GGCGAAGCTGGCTGAGTGCCAAGACCAACTGCAGGG...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTTCCAGCTTGTCCCCCTaGTGTTCGATCCGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSSSLSP*CSIRLR
Trigger: GCGCAGCCGGATCGAACACCAGGGGGACAAGCTGGA...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTTCCTCCAGCCGCAGCTaGGACTGGTGGATTGCCTCC +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSSSSRS*DWWIAS
Trigger: GGAGGCAATCCACCAGTCCCAGCTGCGGCTGGAGGA...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGGCTGCTCGCTCCTTaGAGAGTGCGTGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSGLLAP*RVRAPW
Trigger: CCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCC...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCTCTGCATGCTGCGGTTaGTGCTCTCGGACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFSACCG*CSRTAP
Trigger: TGGAGCAGTCCGAGAGCACCAACCGCAGCATGCAGA...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACACCACACTTGTGCCAGGCCCTGATAAGTaGCCTCAGGCAGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: ERFALSLGREPWENTTLVPGPDK*PQAGGD
Trigger: ATCTCCTCCTGCCTGAGGCCACTTATCAGGGCCTGG...CACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTCAAAGCCGCAAAGGTaGGCAATTGGGTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: HWERKTTRLLSYGLATLESKPQR*AIGSAG
Trigger: GCCTGCTGACCCAATTGCCCACCTTTGCGGCTTTGA...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGGTTCTTCCCACACGATaGAAACCTGGGGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWVLPTR*KPGGAA
Trigger: GGCGGCTCCCCCAGGTTTCCATCGTGTGGGAAGAAC...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCCACAGGCCGGGCAGATaGTTTTCCAGGGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLHRPGR*FSRGHP
Trigger: TGGATGCCCCCTGGAAAATCATCTGCCCGGCCTGTG...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGACTGAAGATGGTGGCGTaGTCTCCAGGCAATGAGGTG +
Preference number: 4 (lower is better)
Translates to: GQVASKKLGSERFALSLGLKMVA*SPGNEV
Trigger: CACCTCATTGCCTGGAGATCACGCCACCATCTTCAG...TCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTCTGAAGATGGTGGCGTaGTCTCCAGGCAATGAGGTG +
Preference number: 4 (lower is better)
Translates to: ASKKLGSERFALSLGREPLKMVA*SPGNEV
Trigger: CACCTCATTGCCTGGAGATCACGCCACCATCTTCAG...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTCCACCAGCTTGGACATaGGGCACTCCTTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: ASKKLGSERFALSLGREPPPAWT*GTPSPV
Trigger: AACAGGAGAAGGAGTGCCTCATGTCCAAGCTGGTGG...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCACTTCTGCCTTATGCTaGTTCCCGCTGCGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFTSALC*FPLRSR
Trigger: TCTGGAGCGCAGCGGGAATCAGCATAAGGCAGAAGT...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAACTTCTGCCTTATGCTaGTTCCCGCTGCGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GQVASKKLGSERFALSLGTSALC*FPLRSR
Trigger: TCTGGAGCGCAGCGGGAATCAGCATAAGGCAGAAGT...TCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp TCGAGGGTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGACCTTCAGCTGCTCCATaGTGGCCTCCACTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SRVYCEVLGGKWPQRNLGPSAAP*WPPLLP
Trigger: AGGCAGAAGTGGAGGCCATCATGGAGCAGCTGAAGG...TCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGACCCTCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp GTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGACCGGCTGCGCAGGTCTaGTATGATGGCTGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: VYCEVLGGKWPQRNLGVRPAAQV*YDGCEV
Trigger: GACCTCACAGCCATCATATCAGACCTGCGCAGCCGG...TCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp CAGGCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTACGGAGGCCAGGGTCGTaGCATGGAGACGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: QAPSTLKMSTGCPAAFYLRRPGS*HGDAAA
Trigger: CGCCGCGGCGTCTCCATGGCACGACCCTGGCCTCCG...TAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000351030.7
CDS-3UTR GCA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGGGGTGCGCCACAAGGTaGTCTCAAGACCTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: HWERKTTRLLSYGLATLEGCATR*SQDLFL
Trigger: CAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCC...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGCCTTCTCCTCCTTCATaGGCTCGATGTTGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: HWERKTTRLLSYGLATLEPSPPS*ARCCAS
Trigger: TGAGGCACAACATCGAGCGCATGAAGGAGGAGAAGG...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TCGAGGGTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGACCGAAGCTGTGCCTaGAAATGCCCACGCATGGAC +
Preference number: 4 (lower is better)
Translates to: SRVYCEVLGGKWPQRNLGDRSCA*KCPRMD
Trigger: GTCCATGCGTGGGCATTTGCAGGCACAGCTTCGGTC...TCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGACCCTCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTCTGGACCTCGAGGTGTaGCTGGTTGAGTTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: ASKKLGSERFALSLGREPLDLEV*LVEFVL
Trigger: GAGGACAAACTCAACCAGGCACACCTCGAGGTCCAG...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTACTGAGGCCTTCAGCTaGTGGACCTCGAGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSTEAFS*WTSRCA
Trigger: GGCACACCTCGAGGTCCAGCAGCTGAAGGCCTCAGT...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACACCACACTTGTGCTGGGACTGGTGGATTaGCTCCTCCCTCTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: ERFALSLGREPWENTTLVLGLVD*LLPLGN
Trigger: ATTGCCAAGAGGGAGGAGGCAATCCACCAGTCCCAG...CACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTCGCTCCTTGGAGAGTaGGTGCTCCTTGGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: HWERKTTRLLSYGLATLESLLGE*VLLGLF
Trigger: GAACAAACCAAGGAGCACGCACTCTCCAAGGAGCGA...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCAGCATGCTGCGGTTGGTaGTCTCGGACTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPACCGW*SRTAPG
Trigger: GCCTGGAGCAGTCCGAGAGCACCAACCGCAGCATGC...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCGTAGTTCTGCATGCTaGGGTTGGTGCTCTCGGACT +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFRSSAC*GWCSRT
Trigger: AGTCCGAGAGCACCAACCGCAGCATGCAGAACTACG...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTAGGACGTAGTTCTGCATaGTGCGGTTGGTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLGRSSA*CGWCSR
Trigger: CCGAGAGCACCAACCGCAGCATGCAGAACTACGTCC...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACACCACACTTGTGCCTCCAGGAACCTTTTaGCCATCTGGCGCTCACCTT +
Preference number: 4 (lower is better)
Translates to: ERFALSLGREPWENTTLVPPGTF*PSGAHL
Trigger: AAGGTGAGCGCCAGATGGCCAAAAGGTTCCTGGAGG...CACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGCCTTCTGGGCTCGGATaGCCTTCTTCAAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: HWERKTTRLLSYGLATLEPSGLG*PSSSSL
Trigger: AAGAGAGCTTGAAGAAGGCCATCCGAGCCCAGAAGG...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCCCATTGGAGCAAAGCTaGCCTTCAGCCTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: ATLEFLWLPSGLQALISGPLEQS*PSASHS
Trigger: AGAATGAGAGGCTGAAGGCCAGCTTTGCTCCAATGG...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCACCTCGAGGTGTGCCTaGTTGAGTTTGTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: ATLEFLWLPSGLQALISGTSRCA*LSLSSI
Trigger: AATGGAGGACAAACTCAACCAGGCACACCTCGAGGT...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGACCCTGCAGTTGGTCTTaGCACTCAGCCAGCTTCGCC +
Preference number: 4 (lower is better)
Translates to: VYCEVLGGKWPQRNLGVRPCSWS*HSASFA
Trigger: GGCGAAGCTGGCTGAGTGCCAAGACCAACTGCAGGG...TCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGAGGAACTCGATATTCTaGGCACTGGTCGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: HWERKTTRLLSYGLATLERNSIF*ALVASS
Trigger: ACTGGAGGCGACCAGTGCCCAGAATATCGAGTTCCT...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCCGCAGCTGGGACTGGTaGATTGCCTCCTCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLRSWDW*IASSLL
Trigger: CAAGAGGGAGGAGGCAATCCACCAGTCCCAGCTGCG...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCTCCTCGCATCTTCAATaGCACTCTCCAACTGCCTTG +
Preference number: 4 (lower is better)
Translates to: ATLEFLWLPSGLQALISGSSHLQ*HSPTAL
Trigger: CAAGGCAGTTGGAGAGTGCCATTGAAGATGCGAGGA...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTACGGCTCCGCCGCAGCTaGCTCAATTCCGTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLRLRRS*LNSVLV
Trigger: AACCAAAACGGAATTGAGCCAGCTGCGGCGGAGCCG...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGGTGCTTGGGGGCAAGTaGCCTCAAAGAAACTTGGGA +
Preference number: 4 (lower is better)
Translates to: HWERKTTRLLSYGLATLEVLGGK*PQRNLG
Trigger: TCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCAC...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCGAAGGGTGGAAGCTTTaGGGTTGGCAGTTGGATGAA +
Preference number: 4 (lower is better)
Translates to: ATLEFLWLPSGLQALISGEGWKL*GWQLDE
Trigger: TTCATCCAACTGCCAACCCCAAAGCTTCCACCCTTC...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTGCAAAGGTGGGCAATTaGGTCAGCAGGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: ASKKLGSERFALSLGREPAKVGN*VSRLCS
Trigger: TGAGCAGAGCCTGCTGACCCAATTGCCCACCTTTGC...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCTCAAAGCCGCAAAGGTaGGCAATTGGGTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFSKPQR*AIGSAG
Trigger: GCCTGCTGACCCAATTGCCCACCTTTGCGGCTTTGA...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTCACACGATGGAAACCTaGGGGAGCCGCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSHTMET*GSRLRM
Trigger: CATCCTCAGGCGGCTCCCCCAGGTTTCCATCGTGTG...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
3UTR CAA 72 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTaGGCAACTCTGGAGTTCCTATGGCTTCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYG*ATLEFLWLPSG
Trigger: CCCTGATGGAAGCCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCGTGATCTCCAGGCAATaGGGTGGATTCTCCCACTTG +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFVISRQ*GGFSHL
Trigger: CAAGTGGGAGAATCCACCTCATTGCCTGGAGATCAC...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACCCACCAGCTTGGACATaGGGCACTCCTTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: KLGSERFALSLGREPWENPPAWT*GTPSPV
Trigger: AACAGGAGAAGGAGTGCCTCATGTCCAAGCTGGTGG...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCTCACATTGTATTTCCTaGAGGAGCTCTTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: ATLEFLWLPSGLQALISGSHCIS*RSSSTS
Trigger: GGAGGTGGAAGAGCTCCTTCAGGAAATACAATGTGA...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACACCACACTTGTGCTCATAGTTCTTCACTaGGGCCTTCAGCTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: ERFALSLGREPWENTTLVLIVLH*GLQLLD
Trigger: GTCCAGCAGCTGAAGGCCTCAGTGAAGAACTATGAG...CACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGGTGAGAGGTTTGCACTaGGCTTGGGAAGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWVRGLH*AWEGSL
Trigger: AAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCAC...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACATCAAACGTCCTCTCTaGGGGGAGAAGGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: KLGSERFALSLGREPWENIKRPL*GEKGGS
Trigger: GCTTCCACCCTTCTCCCCTCAGAGAGGACGTTTGAT...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACACCACACTTGTGAACACCGTGTTCTCGTaGTCAGTCTCAGCCAGTTCG +
Preference number: 4 (lower is better)
Translates to: ERFALSLGREPWENTTLVNTVFS*SVSASS
Trigger: CGAACTGGCTGAGACTGAGCACGAGAACACGGTGTT...CACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTAACACCGTGTTCTCGTaGTCAGTCTCAGCCAGTTCG +
Preference number: 4 (lower is better)
Translates to: ASKKLGSERFALSLGREPNTVFS*SVSASS
Trigger: CGAACTGGCTGAGACTGAGCACGAGAACACGGTGTT...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTATGCGCTCGATGTTGTaGCTCAACACCGTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: ASKKLGSERFALSLGREPMRSML*LNTVFS
Trigger: CGAGAACACGGTGTTGAGGCACAACATCGAGCGCAT...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACACCACACTTGTGCCTTCTCCTCCTTCATaGGCTCGATGTTGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: ERFALSLGREPWENTTLVPSPPS*ARCCAS
Trigger: TGAGGCACAACATCGAGCGCATGAAGGAGGAGAAGG...CACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCAGGAGAAGTTCCTTCTaGCTTGTCAGGGTGTTGATG +
Preference number: 4 (lower is better)
Translates to: ATLEFLWLPSGLQALISGRRSSF*LVRVLM
Trigger: CATCAACACCCTGACAAGGCAGAAGGAACTTCTCCT...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCTGGTCTCCTCAAATGTaGTCAGCTTCTGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ATLEFLWLPSGLQALISGWSPQM*SASAGE
Trigger: TTCTCCTGCAGAAGCTGAGCACATTTGAGGAGACCA...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCGGAGGTCTCGGAGGGTaGGGTTGGTCTCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLGGLGG*GWSPQM
Trigger: CATTTGAGGAGACCAACCGCACCCTCCGAGACCTCC...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCTCCTTGTCCTTGTCTTaGAGCAGTAACAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFSLSLS*SSNSRR
Trigger: GCGCCTGCTGTTACTGCTGCAAGACAAGGACAAGGA...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TCGAGGGTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAAGCTGTGCCTGCAAATaGCCACGCATGGACTCCATG +
Preference number: 4 (lower is better)
Translates to: SRVYCEVLGGKWPQRNLGSCACK*PRMDSM
Trigger: CATGGAGTCCATGCGTGGGCATTTGCAGGCACAGCT...TCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGACCCTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGAGCTGTGCCTGCAAATaGCCACGCATGGACTCCATG +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWSCACK*PRMDSM
Trigger: CATGGAGTCCATGCGTGGGCATTTGCAGGCACAGCT...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TCGAGGGTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGACTGGACCTCGAGGTGTaGCTGGTTGAGTTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SRVYCEVLGGKWPQRNLGLDLEV*LVEFVL
Trigger: GAGGACAAACTCAACCAGGCACACCTCGAGGTCCAG...TCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGACCCTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTACTGGACCTCGAGGTGTaGCTGGTTGAGTTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLLDLEV*LVEFVL
Trigger: GAGGACAAACTCAACCAGGCACACCTCGAGGTCCAG...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACATGGCACTCTCCAACTaGCTTGCCAGGGTCCCACAT +
Preference number: 4 (lower is better)
Translates to: KLGSERFALSLGREPWENMALSN*LARVPH
Trigger: ATGTGGGACCCTGGCAAGGCAGTTGGAGAGTGCCAT...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTAATGGCACTCTCCAACTaGCTTGCCAGGGTCCCACAT +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLMALSN*LARVPH
Trigger: ATGTGGGACCCTGGCAAGGCAGTTGGAGAGTGCCAT...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGACGTAGTTCTGCATaGTGCGGTTGGTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSGRSSA*CGWCSR
Trigger: CCGAGAGCACCAACCGCAGCATGCAGAACTACGTCC...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTCCAGGCAATGAGGTaGATTCTCCCACTTGCATCC +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFLQAMR*ILPLAS
Trigger: GGATGCAAGTGGGAGAATCCACCTCATTGCCTGGAG...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGCCTCCAGGAACCTTTTaGCCATCTGGCGCTCACCTT +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWPPGTF*PSGAHL
Trigger: AAGGTGAGCGCCAGATGGCCAAAAGGTTCCTGGAGG...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACCTCGGAGGGTGCGGTTaGTCTCCTCAAATGTGCTCA +
Preference number: 4 (lower is better)
Translates to: KLGSERFALSLGREPWENLGGCG*SPQMCS
Trigger: TGAGCACATTTGAGGAGACCAACCGCACCCTCCGAG...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCTGTTCTCAGCCTCTTTaGACCGAAGCTGTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFCSQPL*TEAVPA
Trigger: TGCAGGCACAGCTTCGGTCCAAAGAGGCTGAGAACA...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCGAGGCCTTCAGCTGCTaGACCTCGAGGTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTEAFSC*TSRCAW
Trigger: CCAGGCACACCTCGAGGTCCAGCAGCTGAAGGCCTC...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACACCACACTTGTGTCACAGCGTTCTAGCTaGGCAGCTACTTCATCAGCC +
Preference number: 4 (lower is better)
Translates to: ERFALSLGREPWENTTLVSQRSS*AATSSA
Trigger: GGCTGATGAAGTAGCTGCCCAGCTAGAACGCTGTGA...CACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCTCACAGCGTTCTAGCTaGGCAGCTACTTCATCAGCC +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFSQRSS*AATSSA
Trigger: GGCTGATGAAGTAGCTGCCCAGCTAGAACGCTGTGA...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGGGGCTGCTCGCTCCTTaGAGAGTGCGTGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLGLLAP*RVRAPW
Trigger: CCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCC...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTGGTTCTGCTCAGCTaGGTCTCAAGGTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: HWERKTTRLLSYGLATLELVLLS*VSRSRI
Trigger: AATCCTGGACCTTGAGACCCAGCTGAGCAGAACCAA...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCCCAGGCCCTGATAAGTaGCCTCAGGCAGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLPGPDK*PQAGGD
Trigger: ATCTCCTCCTGCCTGAGGCCACTTATCAGGGCCTGG...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACGCAAAGGTGGGCAATTaGGTCAGCAGGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: KLGSERFALSLGREPWENAKVGN*VSRLCS
Trigger: TGAGCAGAGCCTGCTGACCCAATTGCCCACCTTTGC...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCAATGAGGTGGATTCTTaGTTTTCACCCGGACACTCC +
Preference number: 4 (lower is better)
Translates to: ATLEFLWLPSGLQALISGNEVDS*FSPGHS
Trigger: GGAGTGTCCGGGTGAAAACCAAGAATCCACCTCATT...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393527.7
CDS-3UTR TCA 90 bp GTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGACTGAAGATGGTGGCGTaGTCTCCAGGCAATGAGGTG +
Preference number: 4 (lower is better)
Translates to: VYCEVLGGKWPQRNLGVRLKMVA*SPGNEV
Trigger: CACCTCATTGCCTGGAGATCACGCCACCATCTTCAG...TCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCCACCTTTTTGCATCTTaGCCTCAGACTTCAGACAAC +
Preference number: 4 (lower is better)
Translates to: ATLEFLWLPSGLQALISGHLFAS*PQTSDN
Trigger: GTTGTCTGAAGTCTGAGGTCAAGATGCAAAAAGGTG...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCTCTTCTGAAGTATGGTaGAGTCCTTCTCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ATLEFLWLPSGLQALISGSSEVW*SPSPPS
Trigger: TGAAGGAGGAGAAGGACTTCACCATACTTCAGAAGA...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGGCCTTGTCAGGGTGTTaGTGTCCGTGCAGGTCATTT +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWALSGC*CPCRSF
Trigger: AAATGACCTGCACGGACATCAACACCCTGACAAGGC...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCACTTCTGCCTTATGCTaGTTCCCGCTGCGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLTSALC*FPLRSR
Trigger: TCTGGAGCGCAGCGGGAATCAGCATAAGGCAGAAGT...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCACCTTCAGCTGCTCCATaGTGGCCTCCACTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPPSAAP*WPPLLP
Trigger: AGGCAGAAGTGGAGGCCATCATGGAGCAGCTGAAGG...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TCGAGGGTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGACTCATAGTTCTTCACTaGGGCCTTCAGCTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SRVYCEVLGGKWPQRNLGLIVLH*GLQLLD
Trigger: GTCCAGCAGCTGAAGGCCTCAGTGAAGAACTATGAG...TCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGACCCTCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCACCAGCTTCGCCTCCGTaGTCTTCAGGATGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPPASPP*SSGCQG
Trigger: TCCCTGACATCCTGAAGATCACGGAGGCGAAGCTGG...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCGGCTGCGCAGGTCTaGTATGATGGCTGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNPAAQV*YDGCEV
Trigger: GACCTCACAGCCATCATATCAGACCTGCGCAGCCGG...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TCGAGGGTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGATCCTTCTGGGAAGCCTaGTGTTTCTCTCTCGCCATC +
Preference number: 4 (lower is better)
Translates to: SRVYCEVLGGKWPQRNLGSFWEA*CFSLAI
Trigger: GATGGCGAGAGAGAAACATCAGGCTTCCCAGAAGGA...TCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGACCCTCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGTGAGAGGTTTGCACTaGGCTTGGGAAGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSVRGLH*AWEGSL
Trigger: AAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCAC...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TCGAGGGTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGGGTGCGCCACAAGGTaGTCTCAAGACCTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SRVYCEVLGGKWPQRNLGGCATR*SQDLFL
Trigger: CAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCC...TCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGACCCTCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTACACAGTTACACTGGGTaGGCCACAAGGTGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLHSYTG*ATRCSQ
Trigger: TTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGTG...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTAAACACCGTGTTCTCGTaGTCAGTCTCAGCCAGTTCG +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLNTVFS*SVSASS
Trigger: CGAACTGGCTGAGACTGAGCACGAGAACACGGTGTT...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGCCTTCTCCTCCTTCATaGGCTCGATGTTGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWPSPPS*ARCCAS
Trigger: TGAGGCACAACATCGAGCGCATGAAGGAGGAGAAGG...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TCGAGGGTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGATCCTTGTCCTTGTCTTaGAGCAGTAACAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SRVYCEVLGGKWPQRNLGSLSLS*SSNSRR
Trigger: GCGCCTGCTGTTACTGCTGCAAGACAAGGACAAGGA...TCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGACCCTCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGCTCAGAGGCTGTCTTTaGTTGAGCCTTCTCACATTG +
Preference number: 4 (lower is better)
Translates to: HWERKTTRLLSYGLATLELRGCL*LSLLTL
Trigger: CAATGTGAGAAGGCTCAAGCAAAGACAGCCTCTGAG...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCAGCTGTGCCTGCAAATaGCCACGCATGGACTCCATG +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLSCACK*PRMDSM
Trigger: CATGGAGTCCATGCGTGGGCATTTGCAGGCACAGCT...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCAGACCGAAGCTGTGCCTaGAAATGCCCACGCATGGAC +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPDRSCA*KCPRMD
Trigger: GTCCATGCGTGGGCATTTGCAGGCACAGCTTCGGTC...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGTTTGGACCGAAGCTGTaGCTGCAAATGCCCACGCAT +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWFGPKL*LQMPTH
Trigger: ATGCGTGGGCATTTGCAGGCACAGCTTCGGTCCAAA...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTAGATGGCCTCCACTTCTaGCTTATGCTGATTCCCGCT +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLDGLHF*LMLIPA
Trigger: AGCGGGAATCAGCATAAGGCAGAAGTGGAGGCCATC...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGAGTTGCACGTGTAGCTaGTCAGCATACTCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWSCTCS*SAYSSL
Trigger: GAGCGAGGAGTATGCTGAGCAGCTACACGTGCAACT...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGTCCTTGTCAGCGAGTTaGACGTGTAGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWSLSAS*TCSCSA
Trigger: TGCTGAGCAGCTACACGTGCAACTCGCTGACAAGGA...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGTCCTTGGAGAGTGCGTaGTCCTTGGTTTGTTCCACC +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWSLESA*SLVCST
Trigger: GGTGGAACAAACCAAGGAGCACGCACTCTCCAAGGA...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTTTGGTGCTCTCGGACTaGTCCAGGCGATCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSLVLSD*SRRSFR
Trigger: CCTGAAAGATCGCCTGGAGCAGTCCGAGAGCACCAA...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCAAGGAGAAAACCAAGTaGTTCCTGCTTCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: ATLEFLWLPSGLQALISGKEKTK*FLLHLL
Trigger: CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTT...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCGCCAGGGTCGTGCCATaGAGACGCCGCGGCGGATGC +
Preference number: 4 (lower is better)
Translates to: APSTLKMSTGCPAAFYLIARVVP*RRRGGC
Trigger: GCATCCGCCGCGGCGTCTCCATGGCACGACCCTGGC...GATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000351030.7
CDS-3UTR CCA 90 bp GTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGATCGTCACAGTTACACTaGGTGCGCCACAAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: VYCEVLGGKWPQRNLGVRSSQLH*VRHKVL
Trigger: GAGCACCTTGTGGCGCACCCAGTGTAACTGTGACGA...TCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCTTGGCTTCTGGCAGGTaGGGGAGGACAACACAAAAA +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFLASGR*GRTTQK
Trigger: TTTTTGTGTTGTCCTCCCCCACCTGCCAGAAGCCAA...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351030.7
CDS-3UTR CCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGCTCCAGGCAATGAGGTaGATTCTCCCACTTGCATCC +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWLQAMR*ILPLAS
Trigger: GGATGCAAGTGGGAGAATCCACCTCATTGCCTGGAG...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCCTCGGAGGGTGCGGTTaGTCTCCTCAAATGTGCTCA +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLLGGCG*SPQMCS
Trigger: TGAGCACATTTGAGGAGACCAACCGCACCCTCCGAG...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACCCTTCTGGGCTCGGATaGCCTTCTTCAAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: KLGSERFALSLGREPWENPSGLG*PSSSSL
Trigger: AAGAGAGCTTGAAGAAGGCCATCCGAGCCCAGAAGG...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTCCATTGGAGCAAAGCTaGCCTTCAGCCTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: ASKKLGSERFALSLGREPPLEQS*PSASHS
Trigger: AGAATGAGAGGCTGAAGGCCAGCTTTGCTCCAATGG...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCACCTCGAGGTGTGCCTaGTTGAGTTTGTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFTSRCA*LSLSSI
Trigger: AATGGAGGACAAACTCAACCAGGCACACCTCGAGGT...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATCACAGCGTTCTAGCTaGGCAGCTACTTCATCAGCC +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLSQRSS*AATSSA
Trigger: GGCTGATGAAGTAGCTGCCCAGCTAGAACGCTGTGA...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGCCCTGCAGTTGGTCTTaGCACTCAGCCAGCTTCGCC +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLPCSWS*HSASFA
Trigger: GGCGAAGCTGGCTGAGTGCCAAGACCAACTGCAGGG...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTTGCCTCCTCCCTCTTaGCAATCACCTGTAGGAACT +
Preference number: 4 (lower is better)
Translates to: ASKKLGSERFALSLGREPLPPPS*QSPVGT
Trigger: AGTTCCTACAGGTGATTGCCAAGAGGGAGGAGGCAA...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCTTGCCTCCTCCCTCTTaGCAATCACCTGTAGGAACT +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFLPPPS*QSPVGT
Trigger: AGTTCCTACAGGTGATTGCCAAGAGGGAGGAGGCAA...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCCGCAGCTGGGACTGGTaGATTGCCTCCTCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTRSWDW*IASSLL
Trigger: CAAGAGGGAGGAGGCAATCCACCAGTCCCAGCTGCG...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCAGAGTGCGTGCTCCTTaGTTTGTTCCACCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLRVRAP*FVPPAS
Trigger: GGAGGCAGGTGGAACAAACCAAGGAGCACGCACTCT...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCGGCTCAATTCCGTTTTaGTTCTGCTCAGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFGSIPF*FCSAGS
Trigger: AGACCCAGCTGAGCAGAACCAAAACGGAATTGAGCC...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCACGGCTCCGCCGCAGCTaGCTCAATTCCGTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPRLRRS*LNSVLV
Trigger: AACCAAAACGGAATTGAGCCAGCTGCGGCGGAGCCG...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGATGGCTTGGCAACTCTaGAGTTCCTATGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: HWERKTTRLLSYGLATLEMAWQL*SSYGFH
Trigger: ATGGAAGCCATAGGAACTCCAGAGTTGCCAAGCCAT...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGACAGGCTTCTCAGCTATaGCTTGGCAACTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: GQVASKKLGSERFALSLGQASQL*LGNSGV
Trigger: AACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTG...TCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp GGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAGAAGGGTGGAAGCTTTaGGGTTGGCAGTTGGATGAA +
Preference number: 4 (lower is better)
Translates to: GQVASKKLGSERFALSLGEGWKL*GWQLDE
Trigger: TTCATCCAACTGCCAACCCCAAAGCTTCCACCCTTC...TCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACGTTCTTCCCACACGATaGAAACCTGGGGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNVLPTR*KPGGAA
Trigger: GGCGGCTCCCCCAGGTTTCCATCGTGTGGGAAGAAC...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGGTTCTTCCCACACGATaGAAACCTGGGGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLVLPTR*KPGGAA
Trigger: GGCGGCTCCCCCAGGTTTCCATCGTGTGGGAAGAAC...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAACGTCACAGTTACACTaGGTGCGCCACAAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: VYCEVLGGKWPQRNLGVRTSQLH*VRHKVL
Trigger: GAGCACCTTGTGGCGCACCCAGTGTAACTGTGACGT...TCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393527.7
CDS-3UTR TCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATTCATTCCTCGCTTGTaGGATTTCTGGCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLFIPRL*DFWLLV
Trigger: GACCAGCAGCCAGAAATCTCACAAGCGAGGAATGAA...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000393527.7
CDS-3UTR TCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCACTGAAGATGGTGGCGTaGTCTCCAGGCAATGAGGTG +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPLKMVA*SPGNEV
Trigger: CACCTCATTGCCTGGAGATCACGCCACCATCTTCAG...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCACCACCAGCTTGGACATaGGGCACTCCTTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPPPAWT*GTPSPV
Trigger: AACAGGAGAAGGAGTGCCTCATGTCCAAGCTGGTGG...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTATCCTTCAAGGCCATaGCCTGCTTGGCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTYPSRP*PAWQPQ
Trigger: CTGCGGCTGCCAAGCAGGTCATGGCCTTGAAGGATA...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCGCCTTGTCAGGGTGTTaGTGTCCGTGCAGGTCATTT +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLALSGC*CPCRSF
Trigger: AAATGACCTGCACGGACATCAACACCCTGACAAGGC...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACACCACACTTGTGTCTCATTCTCCAGCTTaGATGCGGAATACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: ERFALSLGREPWENTTLVSHSPA*MRNTQQ
Trigger: CTGCTGAGTATTCCGCATTCAAGCTGGAGAATGAGA...CACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCTCTCATTCTCCAGCTTaGATGCGGAATACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFSHSPA*MRNTQQ
Trigger: CTGCTGAGTATTCCGCATTCAAGCTGGAGAATGAGA...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCCCAGCTTCGCCTCCGTaGTCTTCAGGATGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTPASPP*SSGCQG
Trigger: TCCCTGACATCCTGAAGATCACGGAGGCGAAGCTGG...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCACTCGAGGGTCTATTGTaGAGTGCTTGGGGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPLEGLL*SAWGQV
Trigger: CACTTGCCCCCAAGCACTTCACAATAGACCCTCGAG...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCGGGTTGGCAGTTGGATaGAAACTTGGGAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTGLAVG*KLGRRS
Trigger: GGAGCGCCTCCCAAGTTTTCATCCAACTGCCAACCC...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCAGACGCCGCGGCGGATaGAGTCTGGCTCTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFRRRGG*SLALAA
Trigger: CGCTGCCAGAGCCAGACTGCATCCGCCGCGGCGTCT...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351030.7
CDS-3UTR GCA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTCTCAAGACCTTTTTCTaGGTGAGACTCGTTACTCCG +
Preference number: 4 (lower is better)
Translates to: ASKKLGSERFALSLGREPLKTFF*VRLVTP
Trigger: CGGAGTAACGAGTCTCACGCAGAAAAAGGTCTTGAG...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTCACAGTTACACTGGGTaGGCCACAAGGTGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSHSYTG*ATRCSQ
Trigger: TTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGTG...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGATGGCGCTCACCTTTTTaGATCTTGACCTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: GQVASKKLGSERFALSLGWRSPF*ILTSDF
Trigger: GAAGTCTGAGGTCAAGATGCAAAAAGGTGAGCGCCA...TCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCTGGCGCTCACCTTTTTaGATCTTGACCTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFWRSPF*ILTSDF
Trigger: GAAGTCTGAGGTCAAGATGCAAAAAGGTGAGCGCCA...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGAGAAGTTCCTTCTaGCTTGTCAGGGTGTTGATG +
Preference number: 4 (lower is better)
Translates to: GQVASKKLGSERFALSLGRRSSF*LVRVLM
Trigger: CATCAACACCCTGACAAGGCAGAAGGAACTTCTCCT...TCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCGGAGGTCTCGGAGGGTaGGGTTGGTCTCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTGGLGG*GWSPQM
Trigger: CATTTGAGGAGACCAACCGCACCCTCCGAGACCTCC...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGGAATCCTCTTTGCAGTaGTGTTCCCTCAGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWESSLQ*CSLRRS
Trigger: AGACCTCCTGAGGGAACAGCACTGCAAAGAGGATTC...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTTCCTTGTCCTTGTCTTaGAGCAGTAACAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSSLSLS*SSNSRR
Trigger: GCGCCTGCTGTTACTGCTGCAAGACAAGGACAAGGA...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTCAGAGGCTGTCTTTaGTTGAGCCTTCTCACATTG +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFLRGCL*LSLLTL
Trigger: CAATGTGAGAAGGCTCAAGCAAAGACAGCCTCTGAG...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTTTTGGACCGAAGCTGTaGCTGCAAATGCCCACGCAT +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSFGPKL*LQMPTH
Trigger: ATGCGTGGGCATTTGCAGGCACAGCTTCGGTCCAAA...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCGATGGCCTCCACTTCTaGCTTATGCTGATTCCCGCT +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLDGLHF*LMLIPA
Trigger: AGCGGGAATCAGCATAAGGCAGAAGTGGAGGCCATC...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTCTCGGTCTCCCTTCTaGTTCAACTCCTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLSRSPF*FNSFSC
Trigger: GCAGCTGAAGGAGTTGAAGCAGAAGGGAGACCGAGA...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TCGAGGGTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGACTGGAACTGCCTTCGTaGCGCCTCAATCTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: SRVYCEVLGGKWPQRNLGLELPS*RLNLFV
Trigger: AACAAAGAGATTGAGGCGGCACGAAGGCAGTTCCAG...TCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGACCCTCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGATTTTGTTCTGGGCTaGTCGCTCCTTGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSDFVLG*SLLGEC
Trigger: GCACTCTCCAAGGAGCGAGCAGCCCAGAACAAAATC...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACGGACGTAGTTCTGCATaGTGCGGTTGGTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNGRSSA*CGWCSR
Trigger: CCGAGAGCACCAACCGCAGCATGCAGAACTACGTCC...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACGCGGCGGATGCAGTCTaGCTCTGGCAGCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDAADAV*LWQRLL
Trigger: GAGGAGCCGCTGCCAGAGCCAGACTGCATCCGCCGC...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351030.7
CDS-3UTR CCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCGCATCCAAGGTACCTTaGTTTTCACCCGGACACTCC +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLASKVP*FSPGHS
Trigger: GGAGTGTCCGGGTGAAAACCAAGGTACCTTGGATGC...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTAGAGTTTGTCCTCCATTaGAGCAAAGCTGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLEFVLH*SKAGLQ
Trigger: CTGAAGGCCAGCTTTGCTCCAATGGAGGACAAACTC...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCAGGAACTCGATATTCTaGGCACTGGTCGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLRNSIF*ALVASS
Trigger: ACTGGAGGCGACCAGTGCCCAGAATATCGAGTTCCT...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGTCCTCGCATCTTCAATaGCACTCTCCAACTGCCTTG +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWSSHLQ*HSPTAL
Trigger: CAAGGCAGTTGGAGAGTGCCATTGAAGATGCGAGGA...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTAGGCTCAATTCCGTTTTaGTTCTGCTCAGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLGSIPF*FCSAGS
Trigger: AGACCCAGCTGAGCAGAACCAAAACGGAATTGAGCC...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACACCACACTTGTGATGGCTTGGCAACTCTaGAGTTCCTATGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: ERFALSLGREPWENTTLVMAWQL*SSYGFH
Trigger: ATGGAAGCCATAGGAACTCCAGAGTTGCCAAGCCAT...CACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTACAGGCTTCTCAGCTATaGCTTGGCAACTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLQASQL*LGNSGV
Trigger: AACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTG...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATTGGGAAGGGAGCCTTaGGAAAACACCACACTTGTG +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLLGREP*ENTTLV
Trigger: CACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAA...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGTGCTTGGGGGCAAGTaGCCTCAAAGAAACTTGGGA +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSVLGGK*PQRNLG
Trigger: TCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCAC...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTGGAAGCTTTGGGGTTaGCAGTTGGATGAAAACTTG +
Preference number: 4 (lower is better)
Translates to: HWERKTTRLLSYGLATLEWKLWG*QLDENL
Trigger: CAAGTTTTCATCCAACTGCCAACCCCAAAGCTTCCA...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCAGCAAAGGTGGGCAATTaGGTCAGCAGGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPAKVGN*VSRLCS
Trigger: TGAGCAGAGCCTGCTGACCCAATTGCCCACCTTTGC...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGCGGTCCTTCATGGTTaGCTTCCGTTCCAGAACAGA +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSAVLHG*LPFQNR
Trigger: TCTGTTCTGGAACGGAAGCCAACCATGAAGGACCGC...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393527.7
CDS-3UTR CCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGAAGAGCGGTCCTTCATaGTTGGCTTCCGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWKSGPS*LASVPE
Trigger: TTCTGGAACGGAAGCCAACCATGAAGGACCGCTCTT...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393527.7
CDS-3UTR TCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTAAGACCTTTTTCTGCGTaGGACTCGTTACTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLRPFSA*DSLLRS
Trigger: AGAACGGAGTAACGAGTCTCACGCAGAAAAAGGTCT...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTTTCATTCCTCGCTTGTaGGATTTCTGGCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSFIPRL*DFWLLV
Trigger: GACCAGCAGCCAGAAATCTCACAAGCGAGGAATGAA...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000393527.7
CDS-3UTR TCA 90 bp GGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGATCTTCTGAAGTATGGTaGAGTCCTTCTCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GQVASKKLGSERFALSLGSSEVW*SPSPPS
Trigger: TGAAGGAGGAGAAGGACTTCACCATACTTCAGAAGA...TCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp CCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCATTCAGGCGCGCTTTCTCTaGGTCGGCCTCCGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: PSTLKMSTGCPAAFYLIIQARFL*VGLRQP
Trigger: CGGCTGGCGGAGGCCGACTCAGAGAAAGCGCGCCTG...AATGATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR TCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCAGAATACTCAGCAGTCTaGCGGTGTAGTCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPEYSAV*RCSLST
Trigger: GGTGGAGAGACTACACCGTCAGACTGCTGAGTATTC...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCCAGTTTGTTCCCTCCTaGCAGTTCATTGATTACAAT +
Preference number: 4 (lower is better)
Translates to: ATLEFLWLPSGLQALISGQFVPS*QFIDYN
Trigger: ATTGTAATCAATGAACTGTCAGGAGGGAACAAACTG...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TCGAGGGTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAAGGAGAAGTTCCTTCTaGCTTGTCAGGGTGTTGATG +
Preference number: 4 (lower is better)
Translates to: SRVYCEVLGGKWPQRNLGRRSSF*LVRVLM
Trigger: CATCAACACCCTGACAAGGCAGAAGGAACTTCTCCT...TCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGACCCTCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGTGGTCTCCTCAAATGTaGTCAGCTTCTGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWWSPQM*SASAGE
Trigger: TTCTCCTGCAGAAGCTGAGCACATTTGAGGAGACCA...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCAGATGGCCTCCACTTCTaGCTTATGCTGATTCCCGCT +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPDGLHF*LMLIPA
Trigger: AGCGGGAATCAGCATAAGGCAGAAGTGGAGGCCATC...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACATGGCACTCTCCAACTaGCTTGCCAGGGTCCCACAT +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNMALSN*LARVPH
Trigger: ATGTGGGACCCTGGCAAGGCAGTTGGAGAGTGCCAT...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGCGTAGTTCTGCATGCTaGGGTTGGTGCTCTCGGACT +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLRSSAC*GWCSRT
Trigger: AGTCCGAGAGCACCAACCGCAGCATGCAGAACTACG...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCGTAGTTCTGCATGCTaGGGTTGGTGCTCTCGGACT +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNRSSAC*GWCSRT
Trigger: AGTCCGAGAGCACCAACCGCAGCATGCAGAACTACG...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGTCGTCACAGTTACACTaGGTGCGCCACAAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLSSQLH*VRHKVL
Trigger: GAGCACCTTGTGGCGCACCCAGTGTAACTGTGACGA...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACTTCATGGTTGGCTTCTaGCAGGTGGGGGAGGACAAC +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNFMVGF*QVGEDN
Trigger: GTTGTCCTCCCCCACCTGCCAGAAGCCAACCATGAA...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000351030.7
CDS-3UTR CCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCAGCATCCAAGGTACCTTaGTTTTCACCCGGACACTCC +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPASKVP*FSPGHS
Trigger: GGAGTGTCCGGGTGAAAACCAAGGTACCTTGGATGC...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACAACCTTTTGGCCATCTaGCGCTCACCTTTTTGCATC +
Preference number: 4 (lower is better)
Translates to: KLGSERFALSLGREPWENNLLAI*RSPFCI
Trigger: GATGCAAAAAGGTGAGCGCCAGATGGCCAAAAGGTT...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCCCTCCAGGAACCTTTTaGCCATCTGGCGCTCACCTT +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTPPGTF*PSGAHL
Trigger: AAGGTGAGCGCCAGATGGCCAAAAGGTTCCTGGAGG...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCTCCAGGATTCCAGAGTaGATAAAGCTTCAGCGACAT +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFSRIPE*IKLQRH
Trigger: ATGTCGCTGAAGCTTTATCCACTCTGGAATCCTGGA...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGACCATTGGAGCAAAGCTaGCCTTCAGCCTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: VYCEVLGGKWPQRNLGVRPLEQS*PSASHS
Trigger: AGAATGAGAGGCTGAAGGCCAGCTTTGCTCCAATGG...TCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTACCTCGAGGTGTGCCTaGTTGAGTTTGTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSTSRCA*LSLSSI
Trigger: AATGGAGGACAAACTCAACCAGGCACACCTCGAGGT...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCACGATATTCTGGGCACTaGTCGCCTCCAGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPRYSGH*SPPVSS
Trigger: AGAGGAAACTGGAGGCGACCAGTGCCCAGAATATCG...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCAAGGAACTCGATATTCTaGGCACTGGTCGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPRNSIF*ALVASS
Trigger: ACTGGAGGCGACCAGTGCCCAGAATATCGAGTTCCT...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp CCTAAAACACCAAGCAATCCTTCTTACAGTTTGTTCCCTCCTGACAGTTCATTGCGCAGCTGGGACTGGTaGATTGCCTCCTCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PKTPSNPSYSLFPPDSSLRSWDW*IASSLL
Trigger: CAAGAGGGAGGAGGCAATCCACCAGTCCCAGCTGCG...CAATGAACTGTCAGGAGGGAACAAACTGTAAGAAGGATTGCTTGGTGTTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp CAGGCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAAGCCGCAGCTGGGACTaGTGGATTGCCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: QAPSTLKMSTGCPAAFYLSRSWD*WIASSL
Trigger: GAGGGAGGAGGCAATCCACCAGTCCCAGCTGCGGCT...TAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGAGCCGCAGCTGGGACTaGTGGATTGCCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKSRSWD*WIASSL
Trigger: GAGGGAGGAGGCAATCCACCAGTCCCAGCTGCGGCT...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp CAGGCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAGGGCTGCTCGCTCCTTaGAGAGTGCGTGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: QAPSTLKMSTGCPAAFYLGLLAP*RVRAPW
Trigger: CCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCC...TAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp GTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAGGCTCAATTCCGTTTTaGTTCTGCTCAGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: VYCEVLGGKWPQRNLGVRGSIPF*FCSAGS
Trigger: AGACCCAGCTGAGCAGAACCAAAACGGAATTGAGCC...TCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGATGGCTTGGCAACTCTaGAGTTCCTATGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWMAWQL*SSYGFH
Trigger: ATGGAAGCCATAGGAACTCCAGAGTTGCCAAGCCAT...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCTTCTCAGCTATGGCTTaGCAACTCTGGAGTTCCTAT +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFFSAMA*QLWSSY
Trigger: ATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAA...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACAGTTGGATGAAAACTTaGGAGGCGCTCCTCTACTGT +
Preference number: 4 (lower is better)
Translates to: KLGSERFALSLGREPWENSWMKT*EALLYC
Trigger: ACAGTAGAGGAGCGCCTCCCAAGTTTTCATCCAACT...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGTCAAAGCCGCAAAGGTaGGCAATTGGGTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLSKPQR*AIGSAG
Trigger: GCCTGCTGACCCAATTGCCCACCTTTGCGGCTTTGA...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
3UTR CAA 72 bp TCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTaGGGAAGGGAGCCTTGGGAAAACACCACACTTGTG +
Preference number: 4 (lower is better)
Translates to: SKKLGSERFALS*GREPWENTTLV
Trigger: CACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACGTGATCTCCAGGCAATaGGGTGGATTCTCCCACTTG +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNVISRQ*GGFSHL
Trigger: CAAGTGGGAGAATCCACCTCATTGCCTGGAGATCAC...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTCGGTTCATTTTACAGTaGCCTGAGTCATCATCTTCT +
Preference number: 4 (lower is better)
Translates to: ASKKLGSERFALSLGREPRFILQ*PESSSS
Trigger: AGAAGATGATGACTCAGGTCACTGTAAAATGAACCG...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp GAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACACCACACTTGTGCGGTTCATTTTACAGTaGCCTGAGTCATCATCTTCT +
Preference number: 4 (lower is better)
Translates to: ERFALSLGREPWENTTLVRFILQ*PESSSS
Trigger: AGAAGATGATGACTCAGGTCACTGTAAAATGAACCG...CACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGCACCTTTTTGCATCTTaGCCTCAGACTTCAGACAAC +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWHLFAS*PQTSDN
Trigger: GTTGTCTGAAGTCTGAGGTCAAGATGCAAAAAGGTG...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGATGTAGGTGTTTCTTCTaGAGTATGGTGAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: GQVASKKLGSERFALSLGCRCFF*SMVKSF
Trigger: GAAGGACTTCACCATACTTCAGAAGAAACACCTACA...TCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTAGAGGCTGTCTTTGCTTaGGCCTTCTCACATTGTATT +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLEAVFA*AFSHCI
Trigger: AATACAATGTGAGAAGGCTCAAGCAAAGACAGCCTC...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGGAATACTCAGCAGTCTaGCGGTGTAGTCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLEYSAV*RCSLST
Trigger: GGTGGAGAGACTACACCGTCAGACTGCTGAGTATTC...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTCTCATTCTCCAGCTTaGATGCGGAATACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLSHSPA*MRNTQQ
Trigger: CTGCTGAGTATTCCGCATTCAAGCTGGAGAATGAGA...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGTCCTTCTGGGAAGCCTaGTGTTTCTCTCTCGCCATC +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLSFWEA*CFSLAI
Trigger: GATGGCGAGAGAGAAACATCAGGCTTCCCAGAAGGA...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACTGGCGTATGATGATTTaGGGAACTGGACGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: KLGSERFALSLGREPWENWRMMI*GTGRSS
Trigger: AGAACTACGTCCAGTTCCTCAAATCATCATACGCCA...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGAAAGAAACTTGGGAGTaGGAGGTTTGCACTGAGCTT +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWKETWE*EVCTEL
Trigger: AAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTT...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACAAAGAAACTTGGGAGTaGGAGGTTTGCACTGAGCTT +
Preference number: 4 (lower is better)
Translates to: KLGSERFALSLGREPWENKETWE*EVCTEL
Trigger: AAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTT...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTCTCCTGACAGTTCATTaGTTACAATGTGAAAGCACC +
Preference number: 4 (lower is better)
Translates to: ASKKLGSERFALSLGREPLLTVH*LQCEST
Trigger: GGTGCTTTCACATTGTAATCAATGAACTGTCAGGAG...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR TCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTAGATCCTTCTACACAGTaGTCTCAACGTCACAGTTAC +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLDPSTQ*SQRHSY
Trigger: GTAACTGTGACGTTGAGATCACTGTGTAGAAGGATC...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393527.7
CDS-3UTR GCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCCTCAAGACCTTTTTCTaGGTGAGACTCGTTACTCCG +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLLKTFF*VRLVTP
Trigger: CGGAGTAACGAGTCTCACGCAGAAAAAGGTCTTGAG...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCACAGTTACACTGGGTaGGCCACAAGGTGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNHSYTG*ATRCSQ
Trigger: TTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGTG...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGCACAGTTACACTGGGTaGGCCACAAGGTGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLHSYTG*ATRCSQ
Trigger: TTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGTG...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGATGGCGCTCACCTTTTTaGATCTTGACCTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: VYCEVLGGKWPQRNLGVRWRSPF*ILTSDF
Trigger: GAAGTCTGAGGTCAAGATGCAAAAAGGTGAGCGCCA...TCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCAGGAGAAGTTCCTTCTaGCTTGTCAGGGTGTTGATG +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLRRSSF*LVRVLM
Trigger: CATCAACACCCTGACAAGGCAGAAGGAACTTCTCCT...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTAATGTGCTCAGCTTCTaGAGGAGAAGTTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSNVLSF*RRSSFC
Trigger: GCAGAAGGAACTTCTCCTGCAGAAGCTGAGCACATT...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGTTTGGACCGAAGCTGTaGCTGCAAATGCCCACGCAT +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLFGPKL*LQMPTH
Trigger: ATGCGTGGGCATTTGCAGGCACAGCTTCGGTCCAAA...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTCTCGGTCTCCCTTCTaGTTCAACTCCTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTSRSPF*FNSFSC
Trigger: GCAGCTGAAGGAGTTGAAGCAGAAGGGAGACCGAGA...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGTCTCGGTCTCCCTTCTaGTTCAACTCCTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLSRSPF*FNSFSC
Trigger: GCAGCTGAAGGAGTTGAAGCAGAAGGGAGACCGAGA...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTCCTTGTCAGCGAGTTaGACGTGTAGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTSLSAS*TCSCSA
Trigger: TGCTGAGCAGCTACACGTGCAACTCGCTGACAAGGA...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACTCCTTGTCAGCGAGTTaGACGTGTAGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNSLSAS*TCSCSA
Trigger: TGCTGAGCAGCTACACGTGCAACTCGCTGACAAGGA...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGACTGAGGCCTTCAGCTaGTGGACCTCGAGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKTEAFS*WTSRCA
Trigger: GGCACACCTCGAGGTCCAGCAGCTGAAGGCCTCAGT...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACTCCTTGGAGAGTGCGTaGTCCTTGGTTTGTTCCACC +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNSLESA*SLVCST
Trigger: GGTGGAACAAACCAAGGAGCACGCACTCTCCAAGGA...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCATTCCGTTTTGGTTCTaGTCAGCTGGGTCTCAAGGT +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLIPFWF*SAGSQG
Trigger: ACCTTGAGACCCAGCTGAGCAGAACCAAAACGGAAT...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACGCATGCTGCGGTTGGTaGTCTCGGACTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDACCGW*SRTAPG
Trigger: GCCTGGAGCAGTCCGAGAGCACCAACCGCAGCATGC...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCTGCTTCACCTTCTGCTaGTTTTGGGACTTTTCTAGA +
Preference number: 4 (lower is better)
Translates to: WERKTTRLLSYGLATLEFCFTFC*FWDFSR
Trigger: TCTAGAAAAGTCCCAAAAGCAGCAGAAGGTGAAGCA...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGTCCTGCTTCACCTTCTaGTGCTTTTGGGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWSCFTF*CFWDFS
Trigger: AGAAAAGTCCCAAAAGCAGCAGAAGGTGAAGCAGGA...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATCCTGCTTCACCTTCTaGTGCTTTTGGGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLSCFTF*CFWDFS
Trigger: AGAAAAGTCCCAAAAGCAGCAGAAGGTGAAGCAGGA...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGACCCAGGACGACTTCCTaGTGGTTTAGGTCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: VYCEVLGGKWPQRNLGVRPRTTS*WFRSEK
Trigger: TTTTTCTGACCTAAACCAGCAGGAAGTCGTCCTGGG...TCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTAACCTTTTGGCCATCTaGCGCTCACCTTTTTGCATC +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSNLLAI*RSPFCI
Trigger: GATGCAAAAAGGTGAGCGCCAGATGGCCAAAAGGTT...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCTTCTGGGCTCGGATaGCCTTCTTCAAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNPSGLG*PSSSSL
Trigger: AAGAGAGCTTGAAGAAGGCCATCCGAGCCCAGAAGG...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATCCAGGATTCCAGAGTaGATAAAGCTTCAGCGACAT +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLSRIPE*IKLQRH
Trigger: ATGTCGCTGAAGCTTTATCCACTCTGGAATCCTGGA...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTCCAGGGTTTGTTGTTaGTTTACAAGATCTGTTACC +
Preference number: 4 (lower is better)
Translates to: HWERKTTRLLSYGLATLESRVCC*FTRSVT
Trigger: GGTAACAGATCTTGTAAACCAACAACAAACCCTGGA...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGCCCTGCAGTTGGTCTTaGCACTCAGCCAGCTTCGCC +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKPCSWS*HSASFA
Trigger: GGCGAAGCTGGCTGAGTGCCAAGACCAACTGCAGGG...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCCGATATTCTGGGCACTaGTCGCCTCCAGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTRYSGH*SPPVSS
Trigger: AGAGGAAACTGGAGGCGACCAGTGCCCAGAATATCG...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTCCTCCAGCCGCAGCTaGGACTGGTGGATTGCCTCC +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCSSSRS*DWWIAS
Trigger: GGAGGCAATCCACCAGTCCCAGCTGCGGCTGGAGGA...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCATCCTCGCATCTTCAATaGCACTCTCCAACTGCCTTG +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPSSHLQ*HSPTAL
Trigger: CAAGGCAGTTGGAGAGTGCCATTGAAGATGCGAGGA...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACGGGCTGCTCGCTCCTTaGAGAGTGCGTGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDGLLAP*RVRAPW
Trigger: CCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCC...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGGTGCTTGGGGGCAAGTaGCCTCAAAGAAACTTGGGA +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLVLGGK*PQRNLG
Trigger: TCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCAC...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTGGGATGAGGACTGGTTaGGTAAAGGAAATCATCAAA +
Preference number: 4 (lower is better)
Translates to: ASKKLGSERFALSLGREPGMRTG*VKEIIK
Trigger: TTTGATGATTTCCTTTACCCAACCAGTCCTCATCCC...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGAAGCTTTGGGGTTaGCAGTTGGATGAAAACTTG +
Preference number: 4 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLWKLWG*QLDENL
Trigger: CAAGTTTTCATCCAACTGCCAACCCCAAAGCTTCCA...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCAAGACCTTTTTCTGCGTaGGACTCGTTACTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPRPFSA*DSLLRS
Trigger: AGAACGGAGTAACGAGTCTCACGCAGAAAAAGGTCT...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCCACAGGCCGGGCAGATaGTTTTCCAGGGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: APSTLKMSTGCPAAFYLIHRPGR*FSRGHP
Trigger: TGGATGCCCCCTGGAAAATCATCTGCCCGGCCTGTG...GATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR TCA 90 bp TCGAGGGTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGACGGTTCATTTTACAGTaGCCTGAGTCATCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SRVYCEVLGGKWPQRNLGRFILQ*PESSSS
Trigger: AGAAGATGATGACTCAGGTCACTGTAAAATGAACCG...TCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGACCCTCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTCACCTTTTTGCATCTTaGCCTCAGACTTCAGACAAC +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSHLFAS*PQTSDN
Trigger: GTTGTCTGAAGTCTGAGGTCAAGATGCAAAAAGGTG...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTTCTTCTGAAGTATGGTaGAGTCCTTCTCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSSSEVW*SPSPPS
Trigger: TGAAGGAGGAGAAGGACTTCACCATACTTCAGAAGA...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGTATCCTTCAAGGCCATaGCCTGCTTGGCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKYPSRP*PAWQPQ
Trigger: CTGCGGCTGCCAAGCAGGTCATGGCCTTGAAGGATA...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCATCACATTGTATTTCCTaGAGGAGCTCTTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPSHCIS*RSSSTS
Trigger: GGAGGTGGAAGAGCTCCTTCAGGAAATACAATGTGA...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCGAGGCTGTCTTTGCTTaGGCCTTCTCACATTGTATT +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLEAVFA*AFSHCI
Trigger: AATACAATGTGAGAAGGCTCAAGCAAAGACAGCCTC...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp CCTAAAACACCAAGCAATCCTTCTTACAGTTTGTTCCCTCCTGACAGTTCATTGACTTCTGCCTTATGCTaGTTCCCGCTGCGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PKTPSNPSYSLFPPDSSLTSALC*FPLRSR
Trigger: TCTGGAGCGCAGCGGGAATCAGCATAAGGCAGAAGT...CAATGAACTGTCAGGAGGGAACAAACTGTAAGAAGGATTGCTTGGTGTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR TCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCCCGGCTGCGCAGGTCTaGTATGATGGCTGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCPAAQV*YDGCEV
Trigger: GACCTCACAGCCATCATATCAGACCTGCGCAGCCGG...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp ATGTGGTACCCTAATGTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACAGGAGCGACACGGCTaGGCCCAGAAACGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: MWYPNVVVNLRPVEEILTQERHG*AQKRRL
Trigger: AAGGCGGCGTTTCTGGGCGCAGCCGTGTCGCTCCTG...TGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTACATTAGGGTACCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000393527.7
CDS-3UTR GCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCGTGGATTCTCCCACTTaGATCCCACAGGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFVDSPT*IPQAGQ
Trigger: CTGCCCGGCCTGTGGGATGCAAGTGGGAGAATCCAC...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCTTCAAGGCCATGACCTaGTTGGCAGCCGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: APSTLKMSTGCPAAFYLIFKAMT*LAAAAP
Trigger: TGGGGCTGCGGCTGCCAAGCAGGTCATGGCCTTGAA...GATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCGAATCCTCTTTGCAGTaGTGTTCCCTCAGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTESSLQ*CSLRRS
Trigger: AGACCTCCTGAGGGAACAGCACTGCAAAGAGGATTC...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGGAATCCTCTTTGCAGTaGTGTTCCCTCAGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLESSLQ*CSLRRS
Trigger: AGACCTCCTGAGGGAACAGCACTGCAAAGAGGATTC...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTTTCAGAATCCTCTTTaGAGTGCTGTTCCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLFQNPL*SAVPSG
Trigger: TCCTGAGGGAACAGCACTGCAAAGAGGATTCTGAAA...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp CCTAAAACACCAAGCAATCCTTCTTACAGTTTGTTCCCTCCTGACAGTTCATTGAGCTGTGCCTGCAAATaGCCACGCATGGACTCCATG +
Preference number: 4 (lower is better)
Translates to: PKTPSNPSYSLFPPDSSLSCACK*PRMDSM
Trigger: CATGGAGTCCATGCGTGGGCATTTGCAGGCACAGCT...CAATGAACTGTCAGGAGGGAACAAACTGTAAGAAGGATTGCTTGGTGTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTCCAGATTCTTAATCTaGATGCACAGGCGACTGTTC +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLSRFLI*MHRRLF
Trigger: GAACAGTCGCCTGTGCATGCAGATTAAGAATCTGGA...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAATTCTCCAGCTTGAATaGGGAATACTCAGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: VYCEVLGGKWPQRNLGVRILQLE*GILSSL
Trigger: CAGACTGCTGAGTATTCCGCATTCAAGCTGGAGAAT...TCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCCTGGAACTGCCTTCGTaGCGCCTCAATCTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTLELPS*RLNLFV
Trigger: AACAAAGAGATTGAGGCGGCACGAAGGCAGTTCCAG...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCAAGGAGAAAACCAAGTaGTTCCTGCTTCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLKEKTK*FLLHLL
Trigger: CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTT...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCGCGGTCCTTCATGGTTaGCTTCTGGCAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCAVLHG*LLAGGG
Trigger: TCCCCCACCTGCCAGAAGCCAACCATGAAGGACCGC...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000351030.7
CDS-3UTR CCA 90 bp CCTAAAACACCAAGCAATCCTTCTTACAGTTTGTTCCCTCCTGACAGTTCATTGAAGAGCGGTCCTTCATaGTTGGCTTCTGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PKTPSNPSYSLFPPDSSLKSGPS*LASGRW
Trigger: CCACCTGCCAGAAGCCAACCATGAAGGACCGCTCTT...CAATGAACTGTCAGGAGGGAACAAACTGTAAGAAGGATTGCTTGGTGTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351030.7
CDS-3UTR CCA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTCGGCTCGCTCCTTCTaGGCTCGGATGGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDSARSF*ARMAFF
Trigger: GAAGAAGGCCATCCGAGCCCAGAAGGAGCGAGCCGA...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACGAGTTTGTCCTCCATTaGAGCAAAGCTGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNEFVLH*SKAGLQ
Trigger: CTGAAGGCCAGCTTTGCTCCAATGGAGGACAAACTC...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACTTGCCTCCTCCCTCTTaGCAATCACCTGTAGGAACT +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNLPPPS*QSPVGT
Trigger: AGTTCCTACAGGTGATTGCCAAGAGGGAGGAGGCAA...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp CCTAAAACACCAAGCAATCCTTCTTACAGTTTGTTCCCTCCTGACAGTTCATTGAGAGTGCGTGCTCCTTaGTTTGTTCCACCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PKTPSNPSYSLFPPDSSLRVRAP*FVPPAS
Trigger: GGAGGCAGGTGGAACAAACCAAGGAGCACGCACTCT...CAATGAACTGTCAGGAGGGAACAAACTGTAAGAAGGATTGCTTGGTGTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACTTGGTTCTGCTCAGCTaGGTCTCAAGGTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNLVLLS*VSRSRI
Trigger: AATCCTGGACCTTGAGACCCAGCTGAGCAGAACCAA...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGCCAGGCCCTGATAAGTaGCCTCAGGCAGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKPGPDK*PQAGGD
Trigger: ATCTCCTCCTGCCTGAGGCCACTTATCAGGGCCTGG...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTTTCTCAGCTATGGCTTaGCAACTCTGGAGTTCCTAT +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSFSAMA*QLWSSY
Trigger: ATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAA...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGCAGGCTTCTCAGCTATaGCTTGGCAACTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLQASQL*LGNSGV
Trigger: AACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTG...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACCACACGATGGAAACCTaGGGGAGCCGCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDHTMET*GSRLRM
Trigger: CATCCTCAGGCGGCTCCCCCAGGTTTCCATCGTGTG...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCCTCCAGGCAATGAGGTaGATTCTTGGTTTTCACCCG +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTLQAMR*ILGFHP
Trigger: CGGGTGAAAACCAAGAATCCACCTCATTGCCTGGAG...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393527.7
CDS-3UTR TCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTTGTAGGTGTTTCTTCTaGAGTATGGTGAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSCRCFF*SMVKSF
Trigger: GAAGGACTTCACCATACTTCAGAAGAAACACCTACA...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp ATATATACTGTACACTACCCCATCCTCTTCCTAATAGCTAAAGTGATCTACCCTTATCCTTCAAGGCCATaGCCTGCTTGGCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: IYTVHYPILFLIAKVIYPYPSRP*PAWQPQ
Trigger: CTGCGGCTGCCAAGCAGGTCATGGCCTTGAAGGATA...AGGGTAGATCACTTTAGCTATTAGGAAGAGGATGGGGTAGTGTACAGTATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR TCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTATCCTTCAAGGCCATaGCCTGCTTGGCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCYPSRP*PAWQPQ
Trigger: CTGCGGCTGCCAAGCAGGTCATGGCCTTGAAGGATA...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTCACATTGTATTTCCTaGAGGAGCTCTTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTSHCIS*RSSSTS
Trigger: GGAGGTGGAAGAGCTCCTTCAGGAAATACAATGTGA...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACTCACATTGTATTTCCTaGAGGAGCTCTTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNSHCIS*RSSSTS
Trigger: GGAGGTGGAAGAGCTCCTTCAGGAAATACAATGTGA...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCAGAGGCTGTCTTTGCTTaGGCCTTCTCACATTGTATT +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPEAVFA*AFSHCI
Trigger: AATACAATGTGAGAAGGCTCAAGCAAAGACAGCCTC...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCCCTTCAGCTGCTCCATaGTGGCCTCCACTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCPSAAP*WPPLLP
Trigger: AGGCAGAAGTGGAGGCCATCATGGAGCAGCTGAAGG...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp ATATATACTGTACACTACCCCATCCTCTTCCTAATAGCTAAAGTGATCTACCCTCCAGCTTCGCCTCCGTaGTCTTCAGGATGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: IYTVHYPILFLIAKVIYPPASPP*SSGCQG
Trigger: TCCCTGACATCCTGAAGATCACGGAGGCGAAGCTGG...AGGGTAGATCACTTTAGCTATTAGGAAGAGGATGGGGTAGTGTACAGTATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR TCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGCTCGAGGGTCTATTGTaGAGTGCTTGGGGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKLEGLL*SAWGQV
Trigger: CACTTGCCCCCAAGCACTTCACAATAGACCCTCGAG...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGCAGTTTGTTCCCTCCTaGCAGTTCATTGATTACAAT +
Preference number: 4 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWQFVPS*QFIDYN
Trigger: ATTGTAATCAATGAACTGTCAGGAGGGAACAAACTG...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR TCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCGGGTTGGCAGTTGGATaGAAACTTGGGAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCGLAVG*KLGRRS
Trigger: GGAGCGCCTCCCAAGTTTTCATCCAACTGCCAACCC...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTTTCATTCCTCGCTTGTaGGATTTCGTCACAGTTACA +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSFIPRL*DFVTVT
Trigger: TGTAACTGTGACGAAATCTCACAAGCGAGGAATGAA...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTTCATTCCTCGCTTGTaGGATTTCGTCACAGTTACA +
Preference number: 4 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLFIPRL*DFVTVT
Trigger: TGTAACTGTGACGAAATCTCACAAGCGAGGAATGAA...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGGTGATCTCCAGGCAATaGGGTGGATTCTTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLVISRQ*GGFLVF
Trigger: GAAAACCAAGAATCCACCTCATTGCCTGGAGATCAC...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393527.7
CDS-3UTR GCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCGGAGGTCTCGGAGGGTaGGGTTGGTCTCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFGGLGG*GWSPQM
Trigger: CATTTGAGGAGACCAACCGCACCCTCCGAGACCTCC...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCTCAGAGGCTGTCTTTaGTTGAGCCTTCTCACATTG +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNLRGCL*LSLLTL
Trigger: CAATGTGAGAAGGCTCAAGCAAAGACAGCCTCTGAG...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCCTCAGAGGCTGTCTTTaGTTGAGCCTTCTCACATTG +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTLRGCL*LSLLTL
Trigger: CAATGTGAGAAGGCTCAAGCAAAGACAGCCTCTGAG...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGTTGGTGCTCTCGGACTaGTCCAGGCGATCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKLVLSD*SRRSFR
Trigger: CCTGAAAGATCGCCTGGAGCAGTCCGAGAGCACCAA...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGATGCTTCACCTTCTGCTaGTTTTGGGACTTTTCTAGA +
Preference number: 4 (lower is better)
Translates to: VYCEVLGGKWPQRNLGVRCFTFC*FWDFSR
Trigger: TCTAGAAAAGTCCCAAAAGCAGCAGAAGGTGAAGCA...TCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCCAGGACGACTTCCTaGTGGTTTAGGTCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNPRTTS*WFRSEK
Trigger: TTTTTCTGACCTAAACCAGCAGGAAGTCGTCCTGGG...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACAACCTTTTGGCCATCTaGCGCTCACCTTTTTGCATC +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNNLLAI*RSPFCI
Trigger: GATGCAAAAAGGTGAGCGCCAGATGGCCAAAAGGTT...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGCCTCCAGGAACCTTTTaGCCATCTGGCGCTCACCTT +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKPPGTF*PSGAHL
Trigger: AAGGTGAGCGCCAGATGGCCAAAAGGTTCCTGGAGG...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp CAGGCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTACTCGGAGGGTGCGGTTaGTCTCCTCAAATGTGCTCA +
Preference number: 4 (lower is better)
Translates to: QAPSTLKMSTGCPAAFYLLGGCG*SPQMCS
Trigger: TGAGCACATTTGAGGAGACCAACCGCACCCTCCGAG...TAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCATCCAGGATTCCAGAGTaGATAAAGCTTCAGCGACAT +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPSRIPE*IKLQRH
Trigger: ATGTCGCTGAAGCTTTATCCACTCTGGAATCCTGGA...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp CCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCATTGAGGCCTTCAGCTGCTaGACCTCGAGGTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PSTLKMSTGCPAAFYLIIEAFSC*TSRCAW
Trigger: CCAGGCACACCTCGAGGTCCAGCAGCTGAAGGCCTC...AATGATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGAGAGTGCGTGCTCCTTaGTTTGTTCCACCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKRVRAP*FVPPAS
Trigger: GGAGGCAGGTGGAACAAACCAAGGAGCACGCACTCT...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTCTGCATGCTGCGGTTaGTGCTCTCGGACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCSACCG*CSRTAP
Trigger: TGGAGCAGTCCGAGAGCACCAACCGCAGCATGCAGA...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTCTGCATGCTGCGGTTaGTGCTCTCGGACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDSACCG*CSRTAP
Trigger: TGGAGCAGTCCGAGAGCACCAACCGCAGCATGCAGA...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCCAGGCCCTGATAAGTaGCCTCAGGCAGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFPGPDK*PQAGGD
Trigger: ATCTCCTCCTGCCTGAGGCCACTTATCAGGGCCTGG...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCATGGCTTGGCAACTCTaGAGTTCCTATGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTMAWQL*SSYGFH
Trigger: ATGGAAGCCATAGGAACTCCAGAGTTGCCAAGCCAT...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACAGTTGGATGAAAACTTaGGAGGCGCTCCTCTACTGT +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNSWMKT*EALLYC
Trigger: ACAGTAGAGGAGCGCCTCCCAAGTTTTCATCCAACT...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCATGGAAGCTTTGGGGTTaGCAGTTGGATGAAAACTTG +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPWKLWG*QLDENL
Trigger: CAAGTTTTCATCCAACTGCCAACCCCAAAGCTTCCA...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCACAACACAAAAATGGTTaGTCGTCACAGTTACACTGG +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPQHKNG*SSQLHW
Trigger: CCAGTGTAACTGTGACGATCAACCATTTTTGTGTTG...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000351030.7
CDS-3UTR TCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCACGGTTCATTTTACAGTaGCCTGAGTCATCATCTTCT +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPRFILQ*PESSSS
Trigger: AGAAGATGATGACTCAGGTCACTGTAAAATGAACCG...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACGAGGCTGTCTTTGCTTaGGCCTTCTCACATTGTATT +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNEAVFA*AFSHCI
Trigger: AATACAATGTGAGAAGGCTCAAGCAAAGACAGCCTC...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGTGGCGTATGATGATTTaGGGAACTGGACGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLWRMMI*GTGRSS
Trigger: AGAACTACGTCCAGTTCCTCAAATCATCATACGCCA...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCGTGAGAGGTTTGCACTaGGCTTGGGAAGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: APSTLKMSTGCPAAFYLIVRGLH*AWEGSL
Trigger: AAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCAC...GATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR TCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACAAAGAAACTTGGGAGTaGGAGGTTTGCACTGAGCTT +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNKETWE*EVCTEL
Trigger: AAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTT...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCCTCGAGGGTCTATTGTaGAGTGCTTGGGGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCLEGLL*SAWGQV
Trigger: CACTTGCCCCCAAGCACTTCACAATAGACCCTCGAG...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp GTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGATCATTGATTACAATGTaGAAGCACCAACCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: VYCEVLGGKWPQRNLGVRSLITM*KHQPEL
Trigger: TAGCTCAGGTTGGTGCTTTCACATTGTAATCAATGA...TCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR TCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCATCAAACGTCCTCTCTaGGGGGAGAAGGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFIKRPL*GEKGGS
Trigger: GCTTCCACCCTTCTCCCCTCAGAGAGGACGTTTGAT...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACTTTCAGAATCCTCTTTaGAGTGCTGTTCCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNFQNPL*SAVPSG
Trigger: TCCTGAGGGAACAGCACTGCAAAGAGGATTCTGAAA...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTTCAGAATCCTCTTTaGAGTGCTGTTCCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTFQNPL*SAVPSG
Trigger: TCCTGAGGGAACAGCACTGCAAAGAGGATTCTGAAA...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGTCCTTGTCCTTGTCTTaGAGCAGTAACAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKSLSLS*SSNSRR
Trigger: GCGCCTGCTGTTACTGCTGCAAGACAAGGACAAGGA...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGTCCAGATTCTTAATCTaGATGCACAGGCGACTGTTC +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLSRFLI*MHRRLF
Trigger: GAACAGTCGCCTGTGCATGCAGATTAAGAATCTGGA...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGAGTTGCACGTGTAGCTaGTCAGCATACTCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKSCTCS*SAYSSL
Trigger: GAGCGAGGAGTATGCTGAGCAGCTACACGTGCAACT...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACATTCTCCAGCTTGAATaGGGAATACTCAGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNILQLE*GILSSL
Trigger: CAGACTGCTGAGTATTCCGCATTCAAGCTGGAGAAT...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCATTCTCCAGCTTGAATaGGGAATACTCAGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTILQLE*GILSSL
Trigger: CAGACTGCTGAGTATTCCGCATTCAAGCTGGAGAAT...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp ATATATACTGTACACTACCCCATCCTCTTCCTAATAGCTAAAGTGATCTACCCTCTGGACCTCGAGGTGTaGCTGGTTGAGTTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: IYTVHYPILFLIAKVIYPLDLEV*LVEFVL
Trigger: GAGGACAAACTCAACCAGGCACACCTCGAGGTCCAG...AGGGTAGATCACTTTAGCTATTAGGAAGAGGATGGGGTAGTGTACAGTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp CCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCATTACTGAGGCCTTCAGCTaGTGGACCTCGAGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: PSTLKMSTGCPAAFYLIITEAFS*WTSRCA
Trigger: GGCACACCTCGAGGTCCAGCAGCTGAAGGCCTCAGT...AATGATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCCTGGGACTGGTGGATTaGCTCCTCCCTCTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCLGLVD*LLPLGN
Trigger: ATTGCCAAGAGGGAGGAGGCAATCCACCAGTCCCAG...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACATGGCACTCTCCAACTaGCTTGCCAGGGTCCCACAT +
Preference number: 4 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDMALSN*LARVPH
Trigger: ATGTGGGACCCTGGCAAGGCAGTTGGAGAGTGCCAT...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACTCCTGCTTCACCTTCTaGTGCTTTTGGGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNSCFTF*CFWDFS
Trigger: AGAAAAGTCCCAAAAGCAGCAGAAGGTGAAGCAGGA...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCAAACCAAGTGCTTCCTaGTTCACCTTCTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTKPSAS*FTFCCF
Trigger: AAAGCAGCAGAAGGTGAAGCAGGAAGCACTTGGTTT...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCGGGTCTATTGTGAAGTaGTTGGGGGCAAGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCGSIVK*LGASGL
Trigger: GAGGCCACTTGCCCCCAAGCACTTCACAATAGACCC...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGTCTACTGGCTGTCCTaGAGCATTTTACTTAATCAT +
Preference number: 4 (lower is better)
Translates to: FSLGEENHQASQLWLGNSVYWLS*SILLNH
Trigger: ATGATTAAGTAAAATGCTGCAGGACAGCCAGTAGAC...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGATTTCTGGCTGCTaGTCGCTGATGGTTTCGGGA +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKEISGC*SLMVSG
Trigger: TCCCGAAACCATCAGCGACCAGCAGCCAGAAATCTC...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000393527.7
CDS-3UTR CCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCCTCGGAGGGTGCGGTTaGTCTCCTCAAATGTGCTCA +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCLGGCG*SPQMCS
Trigger: TGAGCACATTTGAGGAGACCAACCGCACCCTCCGAG...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp CAGGCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTATGTTCTCAGCCTCTTTaGACCGAAGCTGTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: QAPSTLKMSTGCPAAFYLCSQPL*TEAVPA
Trigger: TGCAGGCACAGCTTCGGTCCAAAGAGGCTGAGAACA...TAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp CAGGCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAAGGAACTCGATATTCTaGGCACTGGTCGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QAPSTLKMSTGCPAAFYLRNSIF*ALVASS
Trigger: ACTGGAGGCGACCAGTGCCCAGAATATCGAGTTCCT...TAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp CCTAAAACACCAAGCAATCCTTCTTACAGTTTGTTCCCTCCTGACAGTTCATTGTTGGTTCTGCTCAGCTaGGTCTCAAGGTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: PKTPSNPSYSLFPPDSSLLVLLS*VSRSRI
Trigger: AATCCTGGACCTTGAGACCCAGCTGAGCAGAACCAA...CAATGAACTGTCAGGAGGGAACAAACTGTAAGAAGGATTGCTTGGTGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp CCTAAAACACCAAGCAATCCTTCTTACAGTTTGTTCCCTCCTGACAGTTCATTGTTGGGAAGGGAGCCTTaGGAAAACACCACACTTGTG +
Preference number: 4 (lower is better)
Translates to: PKTPSNPSYSLFPPDSSLLGREP*ENTTLV
Trigger: CACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAA...CAATGAACTGTCAGGAGGGAACAAACTGTAAGAAGGATTGCTTGGTGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR TCA 90 bp ATATATACTGTACACTACCCCATCCTCTTCCTAATAGCTAAAGTGATCTACCCTGTGATCTCCAGGCAATaGGGTGGATTCTCCCACTTG +
Preference number: 4 (lower is better)
Translates to: IYTVHYPILFLIAKVIYPVISRQ*GGFSHL
Trigger: CAAGTGGGAGAATCCACCTCATTGCCTGGAGATCAC...AGGGTAGATCACTTTAGCTATTAGGAAGAGGATGGGGTAGTGTACAGTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR TCA 90 bp ATGTGGTACCCTAATGTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACCTTCAGCTGCTCCATaGTGGCCTCCACTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: MWYPNVVVNLRPVEEILTPSAAP*WPPLLP
Trigger: AGGCAGAAGTGGAGGCCATCATGGAGCAGCTGAAGG...TGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTACATTAGGGTACCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCGAATACTCAGCAGTCTaGCGGTGTAGTCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFEYSAV*RCSLST
Trigger: GGTGGAGAGACTACACCGTCAGACTGCTGAGTATTC...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp ATATATACTGTACACTACCCCATCCTCTTCCTAATAGCTAAAGTGATCTACCCTCTCATAGTTCTTCACTaGGGCCTTCAGCTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: IYTVHYPILFLIAKVIYPLIVLH*GLQLLD
Trigger: GTCCAGCAGCTGAAGGCCTCAGTGAAGAACTATGAG...AGGGTAGATCACTTTAGCTATTAGGAAGAGGATGGGGTAGTGTACAGTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR TCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTCATAGTTCTTCACTaGGGCCTTCAGCTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFLIVLH*GLQLLD
Trigger: GTCCAGCAGCTGAAGGCCTCAGTGAAGAACTATGAG...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTCCTTCTGGGAAGCCTaGTGTTTCTCTCTCGCCATC +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCSFWEA*CFSLAI
Trigger: GATGGCGAGAGAGAAACATCAGGCTTCCCAGAAGGA...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGTGTGAGATTTCTGGCTaGTGGTCGCTGATGGTTTCG +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKCEISG*WSLMVS
Trigger: CGAAACCATCAGCGACCAGCAGCCAGAAATCTCACA...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000393527.7
CDS-3UTR GCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCATGCGCTCGATGTTGTaGCTCAACACCGTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCMRSML*LNTVFS
Trigger: CGAGAACACGGTGTTGAGGCACAACATCGAGCGCAT...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp CCTAAAACACCAAGCAATCCTTCTTACAGTTTGTTCCCTCCTGACAGTTCATTGAATGTGCTCAGCTTCTaGAGGAGAAGTTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PKTPSNPSYSLFPPDSSLNVLSF*RRSSFC
Trigger: GCAGAAGGAACTTCTCCTGCAGAAGCTGAGCACATT...CAATGAACTGTCAGGAGGGAACAAACTGTAAGAAGGATTGCTTGGTGTTTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAATCCTCTTTGCAGTaGTGTTCCCTCAGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKESSLQ*CSLRRS
Trigger: AGACCTCCTGAGGGAACAGCACTGCAAAGAGGATTC...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp CCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCATTGACCGAAGCTGTGCCTaGAAATGCCCACGCATGGAC +
Preference number: 4 (lower is better)
Translates to: PSTLKMSTGCPAAFYLIIDRSCA*KCPRMD
Trigger: GTCCATGCGTGGGCATTTGCAGGCACAGCTTCGGTC...AATGATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCGATGGCCTCCACTTCTaGCTTATGCTGATTCCCGCT +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCDGLHF*LMLIPA
Trigger: AGCGGGAATCAGCATAAGGCAGAAGTGGAGGCCATC...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCTCTCGGTCTCCCTTCTaGTTCAACTCCTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFSRSPF*FNSFSC
Trigger: GCAGCTGAAGGAGTTGAAGCAGAAGGGAGACCGAGA...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCAGTTGCACGTGTAGCTaGTCAGCATACTCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: APSTLKMSTGCPAAFYLISCTCS*SAYSSL
Trigger: GAGCGAGGAGTATGCTGAGCAGCTACACGTGCAACT...GATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCTCCTTGTCAGCGAGTTaGACGTGTAGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFSLSAS*TCSCSA
Trigger: TGCTGAGCAGCTACACGTGCAACTCGCTGACAAGGA...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp ATATATACTGTACACTACCCCATCCTCTTCCTAATAGCTAAAGTGATCTACCCTTCCTTGGAGAGTGCGTaGTCCTTGGTTTGTTCCACC +
Preference number: 4 (lower is better)
Translates to: IYTVHYPILFLIAKVIYPSLESA*SLVCST
Trigger: GGTGGAACAAACCAAGGAGCACGCACTCTCCAAGGA...AGGGTAGATCACTTTAGCTATTAGGAAGAGGATGGGGTAGTGTACAGTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp ATATATACTGTACACTACCCCATCCTCTTCCTAATAGCTAAAGTGATCTACCCTTCGCTCCTTGGAGAGTaGGTGCTCCTTGGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: IYTVHYPILFLIAKVIYPSLLGE*VLLGLF
Trigger: GAACAAACCAAGGAGCACGCACTCTCCAAGGAGCGA...AGGGTAGATCACTTTAGCTATTAGGAAGAGGATGGGGTAGTGTACAGTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCTCGCTCCTTGGAGAGTaGGTGCTCCTTGGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFSLLGE*VLLGLF
Trigger: GAACAAACCAAGGAGCACGCACTCTCCAAGGAGCGA...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCGATTTTGTTCTGGGCTaGTCGCTCCTTGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: APSTLKMSTGCPAAFYLIDFVLG*SLLGEC
Trigger: GCACTCTCCAAGGAGCGAGCAGCCCAGAACAAAATC...GATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCGATTTTGTTCTGGGCTaGTCGCTCCTTGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFDFVLG*SLLGEC
Trigger: GCACTCTCCAAGGAGCGAGCAGCCCAGAACAAAATC...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCGATTTTGTTCTGGGCTaGTCGCTCCTTGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCDFVLG*SLLGEC
Trigger: GCACTCTCCAAGGAGCGAGCAGCCCAGAACAAAATC...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTGCTTCACCTTCTGCTaGTTTTGGGACTTTTCTAGA +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTCFTFC*FWDFSR
Trigger: TCTAGAAAAGTCCCAAAAGCAGCAGAAGGTGAAGCA...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGTGCTTCACCTTCTGCTaGTTTTGGGACTTTTCTAGA +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLCFTFC*FWDFSR
Trigger: TCTAGAAAAGTCCCAAAAGCAGCAGAAGGTGAAGCA...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCGCATCCAAGGTACCTTaGTTTTCACCCGGACACTCC +
Preference number: 4 (lower is better)
Translates to: APSTLKMSTGCPAAFYLIASKVP*FSPGHS
Trigger: GGAGTGTCCGGGTGAAAACCAAGGTACCTTGGATGC...GATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp ATATATACTGTACACTACCCCATCCTCTTCCTAATAGCTAAAGTGATCTACCCTTGTTCTCAGCCTCTTTaGACCGAAGCTGTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: IYTVHYPILFLIAKVIYPCSQPL*TEAVPA
Trigger: TGCAGGCACAGCTTCGGTCCAAAGAGGCTGAGAACA...AGGGTAGATCACTTTAGCTATTAGGAAGAGGATGGGGTAGTGTACAGTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCTGTTCTCAGCCTCTTTaGACCGAAGCTGTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFCSQPL*TEAVPA
Trigger: TGCAGGCACAGCTTCGGTCCAAAGAGGCTGAGAACA...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTCACAGCGTTCTAGCTaGGCAGCTACTTCATCAGCC +
Preference number: 4 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDSQRSS*AATSSA
Trigger: GGCTGATGAAGTAGCTGCCCAGCTAGAACGCTGTGA...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCGATATTCTGGGCACTaGTCGCCTCCAGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFRYSGH*SPPVSS
Trigger: AGAGGAAACTGGAGGCGACCAGTGCCCAGAATATCG...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp ATATATACTGTACACTACCCCATCCTCTTCCTAATAGCTAAAGTGATCTACCCTCGATATTCTGGGCACTaGTCGCCTCCAGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: IYTVHYPILFLIAKVIYPRYSGH*SPPVSS
Trigger: AGAGGAAACTGGAGGCGACCAGTGCCCAGAATATCG...AGGGTAGATCACTTTAGCTATTAGGAAGAGGATGGGGTAGTGTACAGTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCACCTTCTGCTGCTTTTaGGACTTTTCTAGAGCTAGT +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTTFCCF*DFSRAS
Trigger: ACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGAAGGT...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGGGGATGAGGACTGGTTaGGTAAAGGAAATCATCAAA +
Preference number: 4 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLGMRTG*VKEIIK
Trigger: TTTGATGATTTCCTTTACCCAACCAGTCCTCATCCC...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR TCA 90 bp CAGGCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTATCTCATTCTCCAGCTTaGATGCGGAATACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QAPSTLKMSTGCPAAFYLSHSPA*MRNTQQ
Trigger: CTGCTGAGTATTCCGCATTCAAGCTGGAGAATGAGA...TAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR TCA 90 bp ATGTGGTACCCTAATGTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACAATCAAACGTCCTCTCTaGGGGGAGAAGGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: MWYPNVVVNLRPVEEILTIKRPL*GEKGGS
Trigger: GCTTCCACCCTTCTCCCCTCAGAGAGGACGTTTGAT...TGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTACATTAGGGTACCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGCTCAAGACCTTTTTCTaGGTGAGACTCGTTACTCCG +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKLKTFF*VRLVTP
Trigger: CGGAGTAACGAGTCTCACGCAGAAAAAGGTCTTGAG...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGTGGTCTCCTCAAATGTaGTCAGCTTCTGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKWSPQM*SASAGE
Trigger: TTCTCCTGCAGAAGCTGAGCACATTTGAGGAGACCA...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCCTGGAACTGCCTTCGTaGCGCCTCAATCTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: APSTLKMSTGCPAAFYLILELPS*RLNLFV
Trigger: AACAAAGAGATTGAGGCGGCACGAAGGCAGTTCCAG...GATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCCTGGAACTGCCTTCGTaGCGCCTCAATCTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCLELPS*RLNLFV
Trigger: AACAAAGAGATTGAGGCGGCACGAAGGCAGTTCCAG...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp ATGTGGTACCCTAATGTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTGGGACTGGTGGATTaGCTCCTCCCTCTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: MWYPNVVVNLRPVEEILTLGLVD*LLPLGN
Trigger: ATTGCCAAGAGGGAGGAGGCAATCCACCAGTCCCAG...TGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTACATTAGGGTACCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGATTCCGTTTTGGTTCTaGTCAGCTGGGTCTCAAGGT +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKIPFWF*SAGSQG
Trigger: ACCTTGAGACCCAGCTGAGCAGAACCAAAACGGAAT...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp ATGTGGTACCCTAATGTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACATTGGTGCTCTCGGACTaGTCCAGGCGATCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: MWYPNVVVNLRPVEEILTLVLSD*SRRSFR
Trigger: CCTGAAAGATCGCCTGGAGCAGTCCGAGAGCACCAA...TGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTACATTAGGGTACCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp CAGGCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTACCCAGGACGACTTCCTaGTGGTTTAGGTCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: QAPSTLKMSTGCPAAFYLPRTTS*WFRSEK
Trigger: TTTTTCTGACCTAAACCAGCAGGAAGTCGTCCTGGG...TAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp CCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCATTGTTCTTCCCACACGATaGAAACCAGGAGCGACACGG +
Preference number: 4 (lower is better)
Translates to: PSTLKMSTGCPAAFYLIIVLPTR*KPGATR
Trigger: CCGTGTCGCTCCTGGTTTCCATCGTGTGGGAAGAAC...AATGATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000351030.7
CDS-3UTR CCA 90 bp ATGTGGTACCCTAATGTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACATCGTCACAGTTACACTaGGTGCGCCACAAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: MWYPNVVVNLRPVEEILTSSQLH*VRHKVL
Trigger: GAGCACCTTGTGGCGCACCCAGTGTAACTGTGACGA...TGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTACATTAGGGTACCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCAAGGACAACACAAAAATaGTTGATCGTCACAGTTACA +
Preference number: 4 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPRTTQK*LIVTVT
Trigger: TGTAACTGTGACGATCAACCATTTTTGTGTTGTCCT...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000351030.7
CDS-3UTR CCA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTCCAGGGTTTGTTGTTaGTTTACAAGATCTGTTACC +
Preference number: 4 (lower is better)
Translates to: FQQVTISGRRKPSASCFTSRVCC*FTRSVT
Trigger: GGTAACAGATCTTGTAAACCAACAACAAACCCTGGA...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCCCATTGGAGCAAAGCTaGCCTTCAGCCTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCPLEQS*PSASHS
Trigger: AGAATGAGAGGCTGAAGGCCAGCTTTGCTCCAATGG...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACGAGTTTGTCCTCCATTaGAGCAAAGCTGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDEFVLH*SKAGLQ
Trigger: CTGAAGGCCAGCTTTGCTCCAATGGAGGACAAACTC...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCGAGTTTGTCCTCCATTaGAGCAAAGCTGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCEFVLH*SKAGLQ
Trigger: CTGAAGGCCAGCTTTGCTCCAATGGAGGACAAACTC...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCACCTCGAGGTGTGCCTaGTTGAGTTTGTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCTSRCA*LSLSSI
Trigger: AATGGAGGACAAACTCAACCAGGCACACCTCGAGGT...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCTTGCCTCCTCCCTCTTaGCAATCACCTGTAGGAACT +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFLPPPS*QSPVGT
Trigger: AGTTCCTACAGGTGATTGCCAAGAGGGAGGAGGCAA...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCGGCTCAATTCCGTTTTaGTTCTGCTCAGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: APSTLKMSTGCPAAFYLIGSIPF*FCSAGS
Trigger: AGACCCAGCTGAGCAGAACCAAAACGGAATTGAGCC...GATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCAGGCTTCTCAGCTATaGCTTGGCAACTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFQASQL*LGNSGV
Trigger: AACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTG...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCGAAGGGTGGAAGCTTTaGGGTTGGCAGTTGGATGAA +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFEGWKL*GWQLDE
Trigger: TTCATCCAACTGCCAACCCCAAAGCTTCCACCCTTC...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCAGACCTTTTTCTGCGTaGGACTCGTTACTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFRPFSA*DSLLRS
Trigger: AGAACGGAGTAACGAGTCTCACGCAGAAAAAGGTCT...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCAGACCTTTTTCTGCGTaGGACTCGTTACTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCRPFSA*DSLLRS
Trigger: AGAACGGAGTAACGAGTCTCACGCAGAAAAAGGTCT...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp CCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCATTGCCTTGTCAGGGTGTTaGTGTCCGTGCAGGTCATTT +
Preference number: 4 (lower is better)
Translates to: PSTLKMSTGCPAAFYLIIALSGC*CPCRSF
Trigger: AAATGACCTGCACGGACATCAACACCCTGACAAGGC...AATGATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR TCA 90 bp ATGTGGTACCCTAATGTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACAGAATACTCAGCAGTCTaGCGGTGTAGTCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: MWYPNVVVNLRPVEEILTEYSAV*RCSLST
Trigger: GGTGGAGAGACTACACCGTCAGACTGCTGAGTATTC...TGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTACATTAGGGTACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGTGGCGTATGATGATTTaGGGAACTGGACGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKWRMMI*GTGRSS
Trigger: AGAACTACGTCCAGTTCCTCAAATCATCATACGCCA...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp CAGGCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTATGGCGTATGATGATTTaGGGAACTGGACGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: QAPSTLKMSTGCPAAFYLWRMMI*GTGRSS
Trigger: AGAACTACGTCCAGTTCCTCAAATCATCATACGCCA...TAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTCAAGACCTTTTTCTaGGTGAGACTCGTTACTCCG +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFLKTFF*VRLVTP
Trigger: CGGAGTAACGAGTCTCACGCAGAAAAAGGTCTTGAG...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp ATGTGGTACCCTAATGTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACAGGGTGCGCCACAAGGTaGTCTCAAGACCTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: MWYPNVVVNLRPVEEILTGCATR*SQDLFL
Trigger: CAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCC...TGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTACATTAGGGTACCACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp CCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCATTGGGTGCGCCACAAGGTaGTCTCAAGACCTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: PSTLKMSTGCPAAFYLIIGCATR*SQDLFL
Trigger: CAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCC...AATGATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTGGCGCTCACCTTTTTaGATCTTGACCTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDWRSPF*ILTSDF
Trigger: GAAGTCTGAGGTCAAGATGCAAAAAGGTGAGCGCCA...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp ATGTGGTACCCTAATGTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACAAACACCGTGTTCTCGTaGTCAGTCTCAGCCAGTTCG +
Preference number: 4 (lower is better)
Translates to: MWYPNVVVNLRPVEEILTNTVFS*SVSASS
Trigger: CGAACTGGCTGAGACTGAGCACGAGAACACGGTGTT...TGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTACATTAGGGTACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp CCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCATTATGCGCTCGATGTTGTaGCTCAACACCGTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: PSTLKMSTGCPAAFYLIIMRSML*LNTVFS
Trigger: CGAGAACACGGTGTTGAGGCACAACATCGAGCGCAT...AATGATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp ATGTGGTACCCTAATGTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACCTTCTCCTCCTTCATaGGCTCGATGTTGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: MWYPNVVVNLRPVEEILTPSPPS*ARCCAS
Trigger: TGAGGCACAACATCGAGCGCATGAAGGAGGAGAAGG...TGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTACATTAGGGTACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACAATGTGCTCAGCTTCTaGAGGAGAAGTTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDNVLSF*RRSSFC
Trigger: GCAGAAGGAACTTCTCCTGCAGAAGCTGAGCACATT...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCAATGTGCTCAGCTTCTaGAGGAGAAGTTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCNVLSF*RRSSFC
Trigger: GCAGAAGGAACTTCTCCTGCAGAAGCTGAGCACATT...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTGGTCTCCTCAAATGTaGTCAGCTTCTGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCWSPQM*SASAGE
Trigger: TTCTCCTGCAGAAGCTGAGCACATTTGAGGAGACCA...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp ATGTGGTACCCTAATGTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACATCCTTGGAGAGTGCGTaGTCCTTGGTTTGTTCCACC +
Preference number: 4 (lower is better)
Translates to: MWYPNVVVNLRPVEEILTSLESA*SLVCST
Trigger: GGTGGAACAAACCAAGGAGCACGCACTCTCCAAGGA...TGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTACATTAGGGTACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp CCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCATTTCGCTCCTTGGAGAGTaGGTGCTCCTTGGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: PSTLKMSTGCPAAFYLIISLLGE*VLLGLF
Trigger: GAACAAACCAAGGAGCACGCACTCTCCAAGGAGCGA...AATGATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCATTCCGTTTTGGTTCTaGTCAGCTGGGTCTCAAGGT +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCIPFWF*SAGSQG
Trigger: ACCTTGAGACCCAGCTGAGCAGAACCAAAACGGAAT...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp ATGTGGTACCCTAATGTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACAGAGATTTCTGGCTGCTaGTCGCTGATGGTTTCGGGA +
Preference number: 4 (lower is better)
Translates to: MWYPNVVVNLRPVEEILTEISGC*SLMVSG
Trigger: TCCCGAAACCATCAGCGACCAGCAGCCAGAAATCTC...TGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTACATTAGGGTACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000393527.7
CDS-3UTR CCA 90 bp ATGTGGTACCCTAATGTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTCCAGGCAATGAGGTaGATTCTCCCACTTGCATCC +
Preference number: 4 (lower is better)
Translates to: MWYPNVVVNLRPVEEILTLQAMR*ILPLAS
Trigger: GGATGCAAGTGGGAGAATCCACCTCATTGCCTGGAG...TGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTACATTAGGGTACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp CAGGCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTATTCTCAGCTATGGCTTaGCAACTCTGGAGTTCCTAT +
Preference number: 4 (lower is better)
Translates to: QAPSTLKMSTGCPAAFYLFSAMA*QLWSSY
Trigger: ATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAA...TAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR TCA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACCACCTTTTTGCATCTTaGCCTCAGACTTCAGACAAC +
Preference number: 4 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDHLFAS*PQTSDN
Trigger: GTTGTCTGAAGTCTGAGGTCAAGATGCAAAAAGGTG...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCTCTTCTGAAGTATGGTaGAGTCCTTCTCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFSSEVW*SPSPPS
Trigger: TGAAGGAGGAGAAGGACTTCACCATACTTCAGAAGA...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGTGTAGGTGTTTCTTCTaGAGTATGGTGAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKCRCFF*SMVKSF
Trigger: GAAGGACTTCACCATACTTCAGAAGAAACACCTACA...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGCTCCTGACAGTTCATTaGTTACAATGTGAAAGCACC +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKLLTVH*LQCEST
Trigger: GGTGCTTTCACATTGTAATCAATGAACTGTCAGGAG...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp ATATATACTGTACACTACCCCATCCTCTTCCTAATAGCTAAAGTGATCTACCCTTTTCAGAATCCTCTTTaGAGTGCTGTTCCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: IYTVHYPILFLIAKVIYPFQNPL*SAVPSG
Trigger: TCCTGAGGGAACAGCACTGCAAAGAGGATTCTGAAA...AGGGTAGATCACTTTAGCTATTAGGAAGAGGATGGGGTAGTGTACAGTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp ATATATACTGTACACTACCCCATCCTCTTCCTAATAGCTAAAGTGATCTACCCTTCCAGATTCTTAATCTaGATGCACAGGCGACTGTTC +
Preference number: 4 (lower is better)
Translates to: IYTVHYPILFLIAKVIYPSRFLI*MHRRLF
Trigger: GAACAGTCGCCTGTGCATGCAGATTAAGAATCTGGA...AGGGTAGATCACTTTAGCTATTAGGAAGAGGATGGGGTAGTGTACAGTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCTCCAGATTCTTAATCTaGATGCACAGGCGACTGTTC +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFSRFLI*MHRRLF
Trigger: GAACAGTCGCCTGTGCATGCAGATTAAGAATCTGGA...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACATTCTCCAGCTTGAATaGGGAATACTCAGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDILQLE*GILSSL
Trigger: CAGACTGCTGAGTATTCCGCATTCAAGCTGGAGAAT...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp GCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCTCCTGCTTCACCTTCTaGTGCTTTTGGGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: APSTLKMSTGCPAAFYLISCFTF*CFWDFS
Trigger: AGAAAAGTCCCAAAAGCAGCAGAAGGTGAAGCAGGA...GATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp ATATATACTGTACACTACCCCATCCTCTTCCTAATAGCTAAAGTGATCTACCCTAAACCAAGTGCTTCCTaGTTCACCTTCTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: IYTVHYPILFLIAKVIYPKPSAS*FTFCCF
Trigger: AAAGCAGCAGAAGGTGAAGCAGGAAGCACTTGGTTT...AGGGTAGATCACTTTAGCTATTAGGAAGAGGATGGGGTAGTGTACAGTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCAAACCAAGTGCTTCCTaGTTCACCTTCTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFKPSAS*FTFCCF
Trigger: AAAGCAGCAGAAGGTGAAGCAGGAAGCACTTGGTTT...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCAAACCAAGTGCTTCCTaGTTCACCTTCTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCKPSAS*FTFCCF
Trigger: AAAGCAGCAGAAGGTGAAGCAGGAAGCACTTGGTTT...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCAAGGAGAAAACCAAGTaGTTCCTGCTTCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCKEKTK*FLLHLL
Trigger: CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTT...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCTCCAGGATTCCAGAGTaGATAAAGCTTCAGCGACAT +
Preference number: 4 (lower is better)
Translates to: APSTLKMSTGCPAAFYLISRIPE*IKLQRH
Trigger: ATGTCGCTGAAGCTTTATCCACTCTGGAATCCTGGA...GATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp ATGTGGTACCCTAATGTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACATCCTCGCATCTTCAATaGCACTCTCCAACTGCCTTG +
Preference number: 4 (lower is better)
Translates to: MWYPNVVVNLRPVEEILTSSHLQ*HSPTAL
Trigger: CAAGGCAGTTGGAGAGTGCCATTGAAGATGCGAGGA...TGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTACATTAGGGTACCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp ATGTGGTACCCTAATGTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACATTGGTTCTGCTCAGCTaGGTCTCAAGGTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: MWYPNVVVNLRPVEEILTLVLLS*VSRSRI
Trigger: AATCCTGGACCTTGAGACCCAGCTGAGCAGAACCAA...TGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTACATTAGGGTACCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCTTCTCAGCTATGGCTTaGCAACTCTGGAGTTCCTAT +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFFSAMA*QLWSSY
Trigger: ATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAA...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR TCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCTGTAGGTGTTTCTTCTaGAGTATGGTGAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFCRCFF*SMVKSF
Trigger: GAAGGACTTCACCATACTTCAGAAGAAACACCTACA...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR GCA 90 bp ATGTGGTACCCTAATGTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACAATTCCGTTTTGGTTCTaGTCAGCTGGGTCTCAAGGT +
Preference number: 4 (lower is better)
Translates to: MWYPNVVVNLRPVEEILTIPFWF*SAGSQG
Trigger: ACCTTGAGACCCAGCTGAGCAGAACCAAAACGGAAT...TGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTACATTAGGGTACCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR GCA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGTCTACTGGCTGTCCTaGAGCATTTTACTTAATCAT +
Preference number: 4 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKVYWLS*SILLNH
Trigger: ATGATTAAGTAAAATGCTGCAGGACAGCCAGTAGAC...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCACCTTCTGCTGCTTTTaGGACTTTTCTAGAGCTAGT +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFTFCCF*DFSRAS
Trigger: ACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGAAGGT...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp ATGTGGTACCCTAATGTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACAAGTTGGATGAAAACTTaGGAGGCGCTCCTCTACTGT +
Preference number: 4 (lower is better)
Translates to: MWYPNVVVNLRPVEEILTSWMKT*EALLYC
Trigger: ACAGTAGAGGAGCGCCTCCCAAGTTTTCATCCAACT...TGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTACATTAGGGTACCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393527.7
ENST00000434106.7
CDS-3UTR TCA 90 bp ATATATACTGTACACTACCCCATCCTCTTCCTAATAGCTAAAGTGATCTACCCTTCATTGATTACAATGTaGAAGCACCAACCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: IYTVHYPILFLIAKVIYPSLITM*KHQPEL
Trigger: TAGCTCAGGTTGGTGCTTTCACATTGTAATCAATGA...AGGGTAGATCACTTTAGCTATTAGGAAGAGGATGGGGTAGTGTACAGTATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR GCA 90 bp ATGTGGTACCCTAATGTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACAAAGGAGAAAACCAAGTaGTTCCTGCTTCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: MWYPNVVVNLRPVEEILTKEKTK*FLLHLL
Trigger: CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTT...TGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTACATTAGGGTACCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CCA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCTCCAGGGTTTGTTGTTaGTTTACAAGATCTGTTACC +
Preference number: 4 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFSRVCC*FTRSVT
Trigger: GGTAACAGATCTTGTAAACCAACAACAAACCCTGGA...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTCCAGGGTTTGTTGTTaGTTTACAAGATCTGTTACC +
Preference number: 4 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCSRVCC*FTRSVT
Trigger: GGTAACAGATCTTGTAAACCAACAACAAACCCTGGA...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CCA 90 bp CCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCATTACCTTCTGCTGCTTTTaGGACTTTTCTAGAGCTAGT +
Preference number: 4 (lower is better)
Translates to: PSTLKMSTGCPAAFYLIITFCCF*DFSRAS
Trigger: ACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGAAGGT...AATGATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS CCA 90 bp CCAGGGTCGTGCCATGGAGACGCCGCGGCGGATGCAGTCTGGCTCTaGCAGCGGCTCCTCCCCGCTTCCGCCTCCTTTTCCGACACCCGG +
Preference number: 5 (lower is better)
Translates to: PGSCHGDAAADAVWL*QRLLPASASFSDTR
Trigger: CCGGGTGTCGGAAAAGGAGGCGGAAGCGGGGAGGAGCCGCTGCCAGAGCCAGACTGCATCCGCCGCGGCGTCTCCATGGCACGACCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000372814.7
ENST00000469582.6
CDS CCA 90 bp CGGAGGCCAGGGTCGTGCCATGGAGACGCCGCGGCGGATGCAGTCTaGCTCTGGCAGCGGCTCCTCCCCGCTTCCGCCTCCTTTTCCGAC +
Preference number: 5 (lower is better)
Translates to: RRPGSCHGDAAADAV*LWQRLLPASASFSD
Trigger: GTCGGAAAAGGAGGCGGAAGCGGGGAGGAGCCGCTGCCAGAGCCAGACTGCATCCGCCGCGGCGTCTCCATGGCACGACCCTGGCCTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000372814.7
ENST00000469582.6
CDS GCA 90 bp TTGAAGTCGGAGGCCAGGGTCGTGCCATGGAGACGCCGCGGCGGATaGAGTCTGGCTCTGGCAGCGGCTCCTCCCCGCTTCCGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: LKSEARVVPWRRRGG*SLALAAAPPRFRLL
Trigger: AAGGAGGCGGAAGCGGGGAGGAGCCGCTGCCAGAGCCAGACTGCATCCGCCGCGGCGTCTCCATGGCACGACCCTGGCCTCCGACTTCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000372814.7
ENST00000469582.6
CDS GCA 90 bp GCAGGAGGGTACCGGTTTCTGCCCATAGAGAGAAAGGTGAAGCCCTaGCCGCGGGCGGCAGAGGAGGGGCAGAGCCCCGTGGTAGCCAAG +
Preference number: 5 (lower is better)
Translates to: AGGYRFLPIERKVKP*PRAAEEGQSPVVAK
Trigger: CTTGGCTACCACGGGGCTCTGCCCCTCCTCTGCCGCCCGCGGGCAGGGCTTCACCTTTCTCTCTATGGGCAGAAACCGGTACCCTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000446274.5
ENST00000546203.5
CDS CCA 90 bp CGCCGCCTTATGAAGTCGTTGAAGTCGGAGGCCAGGGTCGTGCCATaGAGACGCCGCGGCGGATGCAGTCTGGCTCTGGCAGCGGCTCCT +
Preference number: 5 (lower is better)
Translates to: RRLMKSLKSEARVVP*RRRGGCSLALAAAP
Trigger: AGGAGCCGCTGCCAGAGCCAGACTGCATCCGCCGCGGCGTCTCCATGGCACGACCCTGGCCTCCGACTTCAACGACTTCATAAGGCGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000372814.7
ENST00000444993.6
ENST00000469582.6
CDS CCA 90 bp CGTGCAGCTCATCTTGGTATGCGGGCCCCTGCTCGGGTCAGTTCGTaGGACCCTTTCTGCCAGTCCCTTACCCGGCTGCGCAGGTCTGAT +
Preference number: 5 (lower is better)
Translates to: RAAHLGMRAPARVSS*DPFCQSLTRLRRSD
Trigger: ATCAGACCTGCGCAGCCGGGTAAGGGACTGGCAGAAAGGGTCCCACGAACTGACCCGAGCAGGGGCCCGCATACCAAGATGAGCTGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372791.7
ENST00000372814.7
ENST00000393533.6
ENST00000448249.7
ENST00000546203.5
CDS GCA 90 bp CTTGGTATGCGGGCCCCTGCTCGGGTCAGTTCGTGGGACCCTTTCTaGCAGTCCCTTACCCGGCTGCGCAGGTCTGATATGATGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LGMRAPARVSSWDPF*QSLTRLRRSDMMAV
Trigger: CACAGCCATCATATCAGACCTGCGCAGCCGGGTAAGGGACTGGCAGAAAGGGTCCCACGAACTGACCCGAGCAGGGGCCCGCATACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372791.7
ENST00000372814.7
ENST00000393533.6
ENST00000448249.7
ENST00000546203.5
CDS CCA 90 bp ATGAGGCAGACATGGCTAGGCATCAAAGCCGCAAAGGTGGGCAATTaGGTCAGCAGGCTCTGCTCAGGGGGACCCAGAGGGGCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: MRQTWLGIKAAKVGN*VSRLCSGGPRGAGL
Trigger: CAAGCCTGCCCCTCTGGGTCCCCCTGAGCAGAGCCTGCTGACCCAATTGCCCACCTTTGCGGCTTTGATGCCTAGCCATGTCTGCCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000372791.7
ENST00000393527.7
ENST00000432065.6
ENST00000434106.7
ENST00000444993.6
ENST00000446274.5
ENST00000469582.6
ENST00000470061.5
ENST00000604420.5
CDS GCA 90 bp CTAGGCATCAAAGCCGCAAAGGTGGGCAATTGGGTCAGCAGGCTCTaGTCAGGGGGACCCAGAGGGGCAGGCTTGTCAATGAGCCTCTCA +
Preference number: 5 (lower is better)
Translates to: LGIKAAKVGNWVSRL*SGGPRGAGLSMSLS
Trigger: TGAGAGGCTCATTGACAAGCCTGCCCCTCTGGGTCCCCCTGAGCAGAGCCTGCTGACCCAATTGCCCACCTTTGCGGCTTTGATGCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000372791.7
ENST00000393527.7
ENST00000432065.6
ENST00000434106.7
ENST00000444993.6
ENST00000446274.5
ENST00000469582.6
ENST00000470061.5
ENST00000604420.5
CDS CCA 90 bp TCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTaGCCTCAGGCAGGAGGAGATCGGGAGCGGATGGGAGAGCTAGTC +
Preference number: 5 (lower is better)
Translates to: SGVPMASIRAPGPDK*PQAGGDRERMGELV
Trigger: GACTAGCTCTCCCATCCGCTCCCGATCTCCTCCTGCCTGAGGCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000488909.1
ENST00000604420.5
CDS-3UTR CAA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCGCCCTGCAGTTGGTCTaGGCACTCAGCCAGCTTCGC +
Preference number: 5 (lower is better)
Translates to: ATLEFLWLPSGLQALISGALQLV*ALSQLR
Trigger: GCGAAGCTGGCTGAGTGCCAAGACCAACTGCAGGGC...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCTGGGCTGCTCGCTCCTaGGAGAGTGCGTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ATLEFLWLPSGLQALISGWAARS*ESACSL
Trigger: CAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCCA...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS GCA 90 bp TCCTCCTTCATGCGCTCGATGTTGTGCCTCAACACCGTGTTCTCGTaGTCAGTCTCAGCCAGTTCGTGGGCCACCTCCTCCAGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SSFMRSMLCLNTVFS*SVSASSWATSSSSS
Trigger: GGAAGAGCTGGAGGAGGTGGCCCACGAACTGGCTGAGACTGAGCACGAGAACACGGTGTTGAGGCACAACATCGAGCGCATGAAGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS GCA 90 bp GCTGCTCGCTCCTTGGAGAGTGCGTGCTCCTTGGTTTGTTCCACCTaGCTCCTCGCATCTTCAATGGCACTCTCCAACTGCCTTGCCAGG +
Preference number: 5 (lower is better)
Translates to: AARSLESACSLVCST*LLASSMALSNCLAR
Trigger: CCTGGCAAGGCAGTTGGAGAGTGCCATTGAAGATGCGAGGAGGCAGGTGGAACAAACCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS GCA 90 bp ATGCCTTCCAATTTAAGGAGCTCTGCAGGGCCTGGGGGATCTAGCTaGCATTTCCAAGGCTGGCAGGGCAGAGCAGAGGTGGAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: MPSNLRSSAGPGGSS*HFQGWQGRAEVEPG
Trigger: TCCAGGCTCCACCTCTGCTCTGCCCTGCCAGCCTTGGAAATGGCAGCTAGATCCCCCAGGCCCTGCAGAGCTCCTTAAATTGGAAGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488909.1
CDS GCA 90 bp GGCTTGAGCCTCCGCGCCCGGTCTACTACCCTCCTGCACTCTCTATaGCGCTCTGTGTACAGACCTATTCTGATGAGGTCCTTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: GLSLRARSTTLLHSL*RSVYRPILMRSLLV
Trigger: GACCAGCAAGGACCTCATCAGAATAGGTCTGTACACAGAGCGGCATAGAGAGTGCAGGAGGGTAGTAGACCGGGCGCGGAGGCTCAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497812.6
CDS CCA 90 bp TCTCCTCCAGCCGCAGCTGGGACTGGTGGATTGCCTCCTCCCTCTTaGCAATCACCTGTAGGAACTCGATATTCTGGGCACTGGTCGCCT +
Preference number: 5 (lower is better)
Translates to: SPPAAAGTGGLPPPS*QSPVGTRYSGHWSP
Trigger: AGGCGACCAGTGCCCAGAATATCGAGTTCCTACAGGTGATTGCCAAGAGGGAGGAGGCAATCCACCAGTCCCAGCTGCGGCTGGAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CCA 90 bp CGGCTCCGCCGCAGCTGGCTCAATTCCGTTTTGGTTCTGCTCAGCTaGGTCTCAAGGTCCAGGATTTTGTTCTGGGCTGCTCGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RLRRSWLNSVLVLLS*VSRSRILFWAARSL
Trigger: CAAGGAGCGAGCAGCCCAGAACAAAATCCTGGACCTTGAGACCCAGCTGAGCAGAACCAAAACGGAATTGAGCCAGCTGCGGCGGAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CCA 90 bp CTGTCATGTTCCACCCCGCCAGGGGGCTGCCAGCCTCTCCTGGACTaGGGATCTCATCATGCCAAGAATCTCCAAGGAGCCACAGGAATA +
Preference number: 5 (lower is better)
Translates to: LSCSTPPGGCQPLLD*GSHHAKNLQGATGI
Trigger: TATTCCTGTGGCTCCTTGGAGATTCTTGGCATGATGAGATCCCCAGTCCAGGAGAGGCTGGCAGCCCCCTGGCGGGGTGGAACATGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488909.1
CDS-3UTR CAA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCGCTGGGACTGGTGGATaGCCTCCTCCCTCTTGGCAA +
Preference number: 5 (lower is better)
Translates to: ATLEFLWLPSGLQALISGAGTGG*PPPSWQ
Trigger: TTGCCAAGAGGGAGGAGGCAATCCACCAGTCCCAGC...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCCACTCTCCAACTGCCTaGCCAGGGTCCCACATTCCC +
Preference number: 5 (lower is better)
Translates to: ATLEFLWLPSGLQALISGHSPTA*PGSHIP
Trigger: GGGAATGTGGGACCCTGGCAAGGCAGTTGGAGAGTG...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS TCA 90 bp TTCGTGGGACCCTTTCTGCCAGTCCCTTACCCGGCTGCGCAGGTCTaGTATGATGGCTGTGAGGTCGATGTTCTTCCGCTCATAGCCCTG +
Preference number: 5 (lower is better)
Translates to: FVGPFLPVPYPAAQV*YDGCEVDVLPLIAL
Trigger: CAGGGCTATGAGCGGAAGAACATCGACCTCACAGCCATCATATCAGACCTGCGCAGCCGGGTAAGGGACTGGCAGAAAGGGTCCCACGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372791.7
ENST00000372814.7
ENST00000393533.6
ENST00000448249.7
ENST00000546203.5
CDS GCA 90 bp GTTTGTTCCACCTGCCTCCTCGCATCTTCAATGGCACTCTCCAACTaGCTTGCCAGGGTCCCACATTCCCGTGTTTTCTCCTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: VCSTCLLASSMALSN*LARVPHSRVFSSSR
Trigger: GCGGCTGGAGGAGAAAACACGGGAATGTGGGACCCTGGCAAGGCAGTTGGAGAGTGCCATTGAAGATGCGAGGAGGCAGGTGGAACAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CCA 90 bp TGTAGCTGCTCAGCATACTCCTCGCTCTTCTCGGCTCGCTCCTTCTaGGCTCGGATGGCCTTCTTCAAGCTCTCTTTGTCTCGGTCTCCC +
Preference number: 5 (lower is better)
Translates to: CSCSAYSSLFSARSF*ARMAFFKLSLSRSP
Trigger: GGGAGACCGAGACAAAGAGAGCTTGAAGAAGGCCATCCGAGCCCAGAAGGAGCGAGCCGAGAAGAGCGAGGAGTATGCTGAGCAGCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS CCA 90 bp GCTGGGTCTCAAGGTCCAGGATTTTGTTCTGGGCTGCTCGCTCCTTaGAGAGTGCGTGCTCCTTGGTTTGTTCCACCTGCCTCCTCGCAT +
Preference number: 5 (lower is better)
Translates to: AGSQGPGFCSGLLAP*RVRAPWFVPPASSH
Trigger: ATGCGAGGAGGCAGGTGGAACAAACCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCCAGAACAAAATCCTGGACCTTGAGACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CCA 90 bp GGTCCGCATCATCACGGCTCCGCCGCAGCTGGCTCAATTCCGTTTTaGTTCTGCTCAGCTGGGTCTCAAGGTCCAGGATTTTGTTCTGGG +
Preference number: 5 (lower is better)
Translates to: GPHHHGSAAAGSIPF*FCSAGSQGPGFCSG
Trigger: CCCAGAACAAAATCCTGGACCTTGAGACCCAGCTGAGCAGAACCAAAACGGAATTGAGCCAGCTGCGGCGGAGCCGTGATGATGCGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000488909.1
ENST00000604420.5
CDS CCA 90 bp ACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATaGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCCTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: TTRLLSYGLATLEFL*LPSGLQALISGLRQ
Trigger: CTGCCTGAGGCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000488909.1
ENST00000604420.5
CDS CCA 90 bp GCCCGGCATCAAACGTCCTCTCTGAGGGGAGAAGGGTGGAAGCTTTaGGGTTGGCAGTTGGATGAAAACTTGGGAGGCGCTCCTCTACTG +
Preference number: 5 (lower is better)
Translates to: ARHQTSSLRGEGWKL*GWQLDENLGGAPLL
Trigger: CAGTAGAGGAGCGCCTCCCAAGTTTTCATCCAACTGCCAACCCCAAAGCTTCCACCCTTCTCCCCTCAGAGAGGACGTTTGATGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000372791.7
ENST00000393527.7
ENST00000432065.6
ENST00000434106.7
ENST00000444993.6
ENST00000446274.5
ENST00000469582.6
ENST00000470061.5
ENST00000604420.5
CDS-3UTR CAA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCAGCGGTCCTTCATGGTaGGCTTCTGGCAGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: WERKTTRLLSYGLATLEFSGPSW*ASGRWG
Trigger: CCCCCACCTGCCAGAAGCCAACCATGAAGGACCGCT...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351030.7
CDS-3UTR CAA 90 bp GGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAGGTGGATTCTCCCACTaGCATCCCACAGGCCGGGCA +
Preference number: 5 (lower is better)
Translates to: GQVASKKLGSERFALSLGGGFSH*HPTGRA
Trigger: TGCCCGGCCTGTGGGATGCAAGTGGGAGAATCCACC...TCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCCTGTTCTCAGCCTCTTaGGACCGAAGCTGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: ATLEFLWLPSGLQALISGLFSAS*DRSCAC
Trigger: GCAGGCACAGCTTCGGTCCAAAGAGGCTGAGAACAG...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACACCACACTTGTGGCCCTGCAGTTGGTCTaGGCACTCAGCCAGCTTCGC +
Preference number: 5 (lower is better)
Translates to: ERFALSLGREPWENTTLVALQLV*ALSQLR
Trigger: GCGAAGCTGGCTGAGTGCCAAGACCAACTGCAGGGC...CACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCCTCATAGCCCTGCAGTaGGTCTTGGCACTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: ATLEFLWLPSGLQALISGLIALQ*VLALSQ
Trigger: CTGGCTGAGTGCCAAGACCAACTGCAGGGCTATGAG...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGCTCGCCATCTCCAGCTaGTCCCCCTGGTGTTCGATC +
Preference number: 5 (lower is better)
Translates to: HWERKTTRLLSYGLATLELAISS*SPWCSI
Trigger: GATCGAACACCAGGGGGACAAGCTGGAGATGGCGAG...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTGCGTGCTCCTTGGTTaGTTCCACCTGCCTCCTCGC +
Preference number: 5 (lower is better)
Translates to: HWERKTTRLLSYGLATLECVLLG*FHLPPR
Trigger: GCGAGGAGGCAGGTGGAACAAACCAAGGAGCACGCA...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS GCA 90 bp GTTCCCTCAGGAGGTCTCGGAGGGTGCGGTTGGTCTCCTCAAATGTaGTCAGCTTCTGCAGGAGAAGTTCCTTCTGCCTTGTCAGGGTGT +
Preference number: 5 (lower is better)
Translates to: VPSGGLGGCGWSPQM*SASAGEVPSALSGC
Trigger: ACACCCTGACAAGGCAGAAGGAACTTCTCCTGCAGAAGCTGAGCACATTTGAGGAGACCAACCGCACCCTCCGAGACCTCCTGAGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS GCA 90 bp GGTTCTGCTCAGCTGGGTCTCAAGGTCCAGGATTTTGTTCTGGGCTaGTCGCTCCTTGGAGAGTGCGTGCTCCTTGGTTTGTTCCACCTG +
Preference number: 5 (lower is better)
Translates to: GSAQLGLKVQDFVLG*SLLGECVLLGLFHL
Trigger: CAGGTGGAACAAACCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCCAGAACAAAATCCTGGACCTTGAGACCCAGCTGAGCAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS GCA 90 bp CATCATCACGGCTCCGCCGCAGCTGGCTCAATTCCGTTTTGGTTCTaGTCAGCTGGGTCTCAAGGTCCAGGATTTTGTTCTGGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: HHHGSAAAGSIPFWF*SAGSQGPGFCSGLL
Trigger: GAGCAGCCCAGAACAAAATCCTGGACCTTGAGACCCAGCTGAGCAGAACCAAAACGGAATTGAGCCAGCTGCGGCGGAGCCGTGATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS GCA 90 bp CCCGCCAGGGGGCTGCCAGCCTCTCCTGGACTGGGGATCTCATCATaGCAAGAATCTCCAAGGAGCCACAGGAATAAGCCAAAGAAATCT +
Preference number: 5 (lower is better)
Translates to: PARGLPASPGLGISS*QESPRSHRNKPKKS
Trigger: AGATTTCTTTGGCTTATTCCTGTGGCTCCTTGGAGATTCTTGGCATGATGAGATCCCCAGTCCAGGAGAGGCTGGCAGCCCCCTGGCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488909.1
CDS CCA 90 bp CAGCATACTCCTCGCTCTTCTCGGCTCGCTCCTTCTGGGCTCGGATaGCCTTCTTCAAGCTCTCTTTGTCTCGGTCTCCCTTCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: QHTPRSSRLAPSGLG*PSSSSLCLGLPSAS
Trigger: TGAAGCAGAAGGGAGACCGAGACAAAGAGAGCTTGAAGAAGGCCATCCGAGCCCAGAAGGAGCGAGCCGAGAAGAGCGAGGAGTATGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS CCA 90 bp GTGCGTGCTCCTTGGTTTGTTCCACCTGCCTCCTCGCATCTTCAATaGCACTCTCCAACTGCCTTGCCAGGGTCCCACATTCCCGTGTTT +
Preference number: 5 (lower is better)
Translates to: VRAPWFVPPASSHLQ*HSPTALPGSHIPVF
Trigger: AAACACGGGAATGTGGGACCCTGGCAAGGCAGTTGGAGAGTGCCATTGAAGATGCGAGGAGGCAGGTGGAACAAACCAAGGAGCACGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS-3UTR CAA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTAGGTGGATTCTCCCACTaGCATCCCACAGGCCGGGCA +
Preference number: 5 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLGGFSH*HPTGRA
Trigger: TGCCCGGCCTGTGGGATGCAAGTGGGAGAATCCACC...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTAGCCCTGCAGTTGGTCTaGGCACTCAGCCAGCTTCGC +
Preference number: 5 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLALQLV*ALSQLR
Trigger: GCGAAGCTGGCTGAGTGCCAAGACCAACTGCAGGGC...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCTGCGTGCTCCTTGGTTaGTTCCACCTGCCTCCTCGC +
Preference number: 5 (lower is better)
Translates to: WERKTTRLLSYGLATLEFCVLLG*FHLPPR
Trigger: GCGAGGAGGCAGGTGGAACAAACCAAGGAGCACGCA...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGGAGAGTGCGTGCTCCTaGGTTTGTTCCACCTGCCTC +
Preference number: 5 (lower is better)
Translates to: HWERKTTRLLSYGLATLEESACS*VCSTCL
Trigger: GAGGCAGGTGGAACAAACCAAGGAGCACGCACTCTC...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGATTCTGCATGCTGCGGTaGGTGCTCTCGGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: GQVASKKLGSERFALSLGFCMLR*VLSDCS
Trigger: GGAGCAGTCCGAGAGCACCAACCGCAGCATGCAGAA...TCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCTTCTGCATGCTGCGGTaGGTGCTCTCGGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: WERKTTRLLSYGLATLEFFCMLR*VLSDCS
Trigger: GGAGCAGTCCGAGAGCACCAACCGCAGCATGCAGAA...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCGCAAAGGTGGGCAATaGGGTCAGCAGGCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: WERKTTRLLSYGLATLEFRKGGQ*GQQALL
Trigger: GAGCAGAGCCTGCTGACCCAATTGCCCACCTTTGCG...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS TCA 90 bp TGGCAGCCGCAGCCCCATCCATTTCCGCCTCCACCAGCTTGGACATaGGGCACTCCTTCTCCTGTTGTAGGTGTTTCTTCTGAAGTATGG +
Preference number: 5 (lower is better)
Translates to: WQPQPHPFPPPPAWT*GTPSPVVGVSSEVW
Trigger: CCATACTTCAGAAGAAACACCTACAACAGGAGAAGGAGTGCCTCATGTCCAAGCTGGTGGAGGCGGAAATGGATGGGGCTGCGGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS TCA 90 bp CTCTCTGAGGGGAGAAGGGTGGAAGCTTTGGGGTTGGCAGTTGGATaGAAACTTGGGAGGCGCTCCTCTACTGTCCAAGTCGCACAGCAA +
Preference number: 5 (lower is better)
Translates to: LSEGRRVEALGLAVG*KLGRRSSTVQVAQQ
Trigger: TTGCTGTGCGACTTGGACAGTAGAGGAGCGCCTCCCAAGTTTTCATCCAACTGCCAACCCCAAAGCTTCCACCCTTCTCCCCTCAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000372791.7
ENST00000393527.7
ENST00000432065.6
ENST00000434106.7
ENST00000444993.6
ENST00000446274.5
ENST00000469582.6
ENST00000470061.5
ENST00000604420.5
CDS GCA 90 bp AGGTCTCGGAGGGTGCGGTTGGTCTCCTCAAATGTGCTCAGCTTCTaGAGGAGAAGTTCCTTCTGCCTTGTCAGGGTGTTGATGTCCGTG +
Preference number: 5 (lower is better)
Translates to: RSRRVRLVSSNVLSF*RRSSFCLVRVLMSV
Trigger: CACGGACATCAACACCCTGACAAGGCAGAAGGAACTTCTCCTGCAGAAGCTGAGCACATTTGAGGAGACCAACCGCACCCTCCGAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS GCA 90 bp GCTCGGATGGCCTTCTTCAAGCTCTCTTTGTCTCGGTCTCCCTTCTaGTTCAACTCCTTCAGCTGCTCCATGATGGCCTCCACTTCTGCC +
Preference number: 5 (lower is better)
Translates to: ARMAFFKLSLSRSPF*FNSFSCSMMASTSA
Trigger: GGCAGAAGTGGAGGCCATCATGGAGCAGCTGAAGGAGTTGAAGCAGAAGGGAGACCGAGACAAAGAGAGCTTGAAGAAGGCCATCCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS GCA 90 bp AGGTCCAGGATTTTGTTCTGGGCTGCTCGCTCCTTGGAGAGTGCGTaGTCCTTGGTTTGTTCCACCTGCCTCCTCGCATCTTCAATGGCA +
Preference number: 5 (lower is better)
Translates to: RSRILFWAARSLESA*SLVCSTCLLASSMA
Trigger: TGCCATTGAAGATGCGAGGAGGCAGGTGGAACAAACCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCCAGAACAAAATCCTGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CCA 90 bp CCTCTTTGCAGTGCTGTTCCCTCAGGAGGTCTCGGAGGGTGCGGTTaGTCTCCTCAAATGTGCTCAGCTTCTGCAGGAGAAGTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: PLCSAVPSGGLGGCG*SPQMCSASAGEVPS
Trigger: AGAAGGAACTTCTCCTGCAGAAGCTGAGCACATTTGAGGAGACCAACCGCACCCTCCGAGACCTCCTGAGGGAACAGCACTGCAAAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS CCA 90 bp GGATTTTGTTCTGGGCTGCTCGCTCCTTGGAGAGTGCGTGCTCCTTaGTTTGTTCCACCTGCCTCCTCGCATCTTCAATGGCACTCTCCA +
Preference number: 5 (lower is better)
Translates to: GFCSGLLAPWRVRAP*FVPPASSHLQWHSP
Trigger: TGGAGAGTGCCATTGAAGATGCGAGGAGGCAGGTGGAACAAACCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCCAGAACAAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS-3UTR CAA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCGGTGGATTCTCCCACTaGCATCCCACAGGCCGGGCA +
Preference number: 5 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLGGFSH*HPTGRA
Trigger: TGCCCGGCCTGTGGGATGCAAGTGGGAGAATCCACC...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCTGCCTTGTCAGGGTGTaGATGTCCGTGCAGGTCATT +
Preference number: 5 (lower is better)
Translates to: ATLEFLWLPSGLQALISGCLVRV*MSVQVI
Trigger: AATGACCTGCACGGACATCAACACCCTGACAAGGCA...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTACTCGCCATCTCCAGCTaGTCCCCCTGGTGTTCGATC +
Preference number: 5 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLLAISS*SPWCSI
Trigger: GATCGAACACCAGGGGGACAAGCTGGAGATGGCGAG...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTTGGGCTGCTCGCTCCTaGGAGAGTGCGTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: FSLGEENHQASQLWLGNSWAARS*ESACSL
Trigger: CAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCCA...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGAGGTTTGCACTGAGCTaGGGAAGGGAGCCTTGGGAA +
Preference number: 5 (lower is better)
Translates to: HWERKTTRLLSYGLATLERFALS*GREPWE
Trigger: TTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCT...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTACGCAAAGGTGGGCAATaGGGTCAGCAGGCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLRKGGQ*GQQALL
Trigger: GAGCAGAGCCTGCTGACCCAATTGCCCACCTTTGCG...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS TCA 90 bp TTCAGCCTCTCATTCTCCAGCTTGAATGCGGAATACTCAGCAGTCTaGCGGTGTAGTCTCTCCACCAGGCTATCCCGGTCTTCCCGCATC +
Preference number: 5 (lower is better)
Translates to: FSLSFSSLNAEYSAV*RCSLSTRLSRSSRI
Trigger: GATGCGGGAAGACCGGGATAGCCTGGTGGAGAGACTACACCGTCAGACTGCTGAGTATTCCGCATTCAAGCTGGAGAATGAGAGGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS TCA 90 bp TTACACTGGGTGCGCCACAAGGTGCTCTCAAGACCTTTTTCTGCGTaGGACTCGTTACTCCGTTCTTCCCACACGATGGAAACCTGGGGG +
Preference number: 5 (lower is better)
Translates to: LHWVRHKVLSRPFSA*DSLLRSSHTMETWG
Trigger: CCCCCAGGTTTCCATCGTGTGGGAAGAACGGAGTAACGAGTCTCACGCAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000372791.7
ENST00000393527.7
ENST00000432065.6
ENST00000434106.7
ENST00000444993.6
ENST00000446274.5
ENST00000469582.6
ENST00000470061.5
ENST00000604420.5
CDS GCA 90 bp CAGAATCCTCTTTGCAGTGCTGTTCCCTCAGGAGGTCTCGGAGGGTaGGGTTGGTCTCCTCAAATGTGCTCAGCTTCTGCAGGAGAAGTT +
Preference number: 5 (lower is better)
Translates to: QNPLCSAVPSGGLGG*GWSPQMCSASAGEV
Trigger: AACTTCTCCTGCAGAAGCTGAGCACATTTGAGGAGACCAACCGCACCCTCCGAGACCTCCTGAGGGAACAGCACTGCAAAGAGGATTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS GCA 90 bp CTGCATGCACAGGCGACTGTTCTCAGCCTCTTTGGACCGAAGCTGTaGCTGCAAATGCCCACGCATGGACTCCATGGATTTAGAAAGCTC +
Preference number: 5 (lower is better)
Translates to: LHAQATVLSLFGPKL*LQMPTHGLHGFRKL
Trigger: GAGCTTTCTAAATCCATGGAGTCCATGCGTGGGCATTTGCAGGCACAGCTTCGGTCCAAAGAGGCTGAGAACAGTCGCCTGTGCATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS GCA 90 bp CTCAAGGTCCAGGATTTTGTTCTGGGCTGCTCGCTCCTTGGAGAGTaGGTGCTCCTTGGTTTGTTCCACCTGCCTCCTCGCATCTTCAAT +
Preference number: 5 (lower is better)
Translates to: LKVQDFVLGCSLLGE*VLLGLFHLPPRIFN
Trigger: ATTGAAGATGCGAGGAGGCAGGTGGAACAAACCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCCAGAACAAAATCCTGGACCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CCA 90 bp GTTTTGGTTCTGCTCAGCTGGGTCTCAAGGTCCAGGATTTTGTTCTaGGCTGCTCGCTCCTTGGAGAGTGCGTGCTCCTTGGTTTGTTCC +
Preference number: 5 (lower is better)
Translates to: VLVLLSWVSRSRILF*AARSLESACSLVCS
Trigger: GGAACAAACCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCCAGAACAAAATCCTGGACCTTGAGACCCAGCTGAGCAGAACCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CCA 90 bp CTGCAGATCAGCAAGGCGACCAAAGAACTGTGCAGCTGGAGCAACTaGTTAGAGAACAGAGTGAAGGGTGGGAACGCAGAGACTGACCGT +
Preference number: 5 (lower is better)
Translates to: LQISKATKELCSWSN*LENRVKGGNAETDR
Trigger: ACGGTCAGTCTCTGCGTTCCCACCCTTCACTCTGTTCTCTAACCAGTTGCTCCAGCTGCACAGTTCTTTGGTCGCCTTGCTGATCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488909.1
CDS-3UTR CAA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTACGCCTTATGAAGTCGTaGAAGTCGGAGGCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLRLMKS*KSEARV
Trigger: GACCCTGGCCTCCGACTTCAACGACTTCATAAGGCG...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACACCACACTTGTGGGCATCCAAGGTACCTaGGTTTTCACCCGGACACTC +
Preference number: 5 (lower is better)
Translates to: ERFALSLGREPWENTTLVGIQGT*VFTRTL
Trigger: GAGTGTCCGGGTGAAAACCAAGGTACCTTGGATGCC...CACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CAA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACTCCTCCAGGAACCTTTaGGCCATCTGGCGCTCACCT +
Preference number: 5 (lower is better)
Translates to: KLGSERFALSLGREPWENSSRNL*AIWRSP
Trigger: AGGTGAGCGCCAGATGGCCAAAAGGTTCCTGGAGGA...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATCCTCCAGGAACCTTTaGGCCATCTGGCGCTCACCT +
Preference number: 5 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLSSRNL*AIWRSP
Trigger: AGGTGAGCGCCAGATGGCCAAAAGGTTCCTGGAGGA...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACTCTCGGAGGGTGCGGTaGGTCTCCTCAAATGTGCTC +
Preference number: 5 (lower is better)
Translates to: KLGSERFALSLGREPWENSRRVR*VSSNVL
Trigger: GAGCACATTTGAGGAGACCAACCGCACCCTCCGAGA...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGCTGTTCTCAGCCTCTTaGGACCGAAGCTGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWLFSAS*DRSCAC
Trigger: GCAGGCACAGCTTCGGTCCAAAGAGGCTGAGAACAG...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCCTCGCCATCTCCAGCTaGTCCCCCTGGTGTTCGATC +
Preference number: 5 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLLAISS*SPWCSI
Trigger: GATCGAACACCAGGGGGACAAGCTGGAGATGGCGAG...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCGCTGGGACTGGTGGATaGCCTCCTCCCTCTTGGCAA +
Preference number: 5 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLAGTGG*PPPSWQ
Trigger: TTGCCAAGAGGGAGGAGGCAATCCACCAGTCCCAGC...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGACACTCTCCAACTGCCTaGCCAGGGTCCCACATTCCC +
Preference number: 5 (lower is better)
Translates to: VYCEVLGGKWPQRNLGVRHSPTA*PGSHIP
Trigger: GGGAATGTGGGACCCTGGCAAGGCAGTTGGAGAGTG...TCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTTGCGTGCTCCTTGGTTaGTTCCACCTGCCTCCTCGC +
Preference number: 5 (lower is better)
Translates to: FSLGEENHQASQLWLGNSCVLLG*FHLPPR
Trigger: GCGAGGAGGCAGGTGGAACAAACCAAGGAGCACGCA...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGCGTGCTCCTTGGTTaGTTCCACCTGCCTCCTCGC +
Preference number: 5 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLCVLLG*FHLPPR
Trigger: GCGAGGAGGCAGGTGGAACAAACCAAGGAGCACGCA...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCATGGGCTGCTCGCTCCTaGGAGAGTGCGTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPWAARS*ESACSL
Trigger: CAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCCA...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTGGCTCAATTCCGTTTaGGTTCTGCTCAGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: HWERKTTRLLSYGLATLEWLNSV*VLLSWV
Trigger: GACCCAGCTGAGCAGAACCAAAACGGAATTGAGCCA...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGATTCTGCATGCTGCGGTaGGTGCTCTCGGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: VYCEVLGGKWPQRNLGVRFCMLR*VLSDCS
Trigger: GGAGCAGTCCGAGAGCACCAACCGCAGCATGCAGAA...TCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GCAACTCTGGAGTTCCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTGGCTGGCCTCAAAGAAACTaGGGAGTGAGAGGTTTGCAC +
Preference number: 5 (lower is better)
Translates to: ATLEFLWLPSGLQALISGWPQRN*GVRGLH
Trigger: GTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCA...GCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGGAACTCCAGAGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS TCA 90 bp TTACACTGGGTGCGCCACAAGGTGCTCTCAAGACCTTTTTCTGCGTaGGACTCGTTACTCCGTTCTTCCCACACGATGGAAACCAGGAGC +
Preference number: 5 (lower is better)
Translates to: LHWVRHKVLSRPFSA*DSLLRSSHTMETRS
Trigger: GCTCCTGGTTTCCATCGTGTGGGAAGAACGGAGTAACGAGTCTCACGCAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000372814.7
ENST00000448249.7
CDS TCA 90 bp AACTCCTTCAGCTGCTCCATGATGGCCTCCACTTCTGCCTTATGCTaGTTCCCGCTGCGCTCCAGATTCTTAATCTGCATGCACAGGCGA +
Preference number: 5 (lower is better)
Translates to: NSFSCSMMASTSALC*FPLRSRFLICMHRR
Trigger: TCGCCTGTGCATGCAGATTAAGAATCTGGAGCGCAGCGGGAATCAGCATAAGGCAGAAGTGGAGGCCATCATGGAGCAGCTGAAGGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS TCA 90 bp AGGTGGAATAGGGACCATCCCCAAACACGTTGGCGTATGATGATTTaGGGAACTGGACGTAGTTCTGCATGCTGCGGTTGGTGCTCTCGG +
Preference number: 5 (lower is better)
Translates to: RWNRDHPQTRWRMMI*GTGRSSACCGWCSR
Trigger: CCGAGAGCACCAACCGCAGCATGCAGAACTACGTCCAGTTCCTCAAATCATCATACGCCAACGTGTTTGGGGATGGTCCCTATTCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000488909.1
ENST00000604420.5
CDS TCA 90 bp TTACACTGGGTGCGCCACAAGGTGCTCTCAAGACCTTTTTCTGCGTaGGACTCGTTACTCCGTTCTTCCCACACGATGGAAACCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LHWVRHKVLSRPFSA*DSLLRSSHTMETSR
Trigger: CCTGCTGGTTTCCATCGTGTGGGAAGAACGGAGTAACGAGTCTCACGCAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421776.6
ENST00000546203.5
CDS GCA 90 bp TTCTCTGAGTCGGCCTCCGCCAGCCGTTTCAGCAGTGCTCCTTGTTaGTCCATTAGTCTTTCAGAATCCTCTTTGCAGTGCTGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: FSESASASRFSSAPC*SISLSESSLQCCSL
Trigger: GAGGGAACAGCACTGCAAAGAGGATTCTGAAAGACTAATGGAGCAACAAGGAGCACTGCTGAAACGGCTGGCGGAGGCCGACTCAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS GCA 90 bp ATGCACAGGCGACTGTTCTCAGCCTCTTTGGACCGAAGCTGTGCCTaGAAATGCCCACGCATGGACTCCATGGATTTAGAAAGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: MHRRLFSASLDRSCA*KCPRMDSMDLESSE
Trigger: CTCTGAGCTTTCTAAATCCATGGAGTCCATGCGTGGGCATTTGCAGGCACAGCTTCGGTCCAAAGAGGCTGAGAACAGTCGCCTGTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS-3UTR CAA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACGGCATCCAAGGTACCTaGGTTTTCACCCGGACACTC +
Preference number: 5 (lower is better)
Translates to: KLGSERFALSLGREPWENGIQGT*VFTRTL
Trigger: GAGTGTCCGGGTGAAAACCAAGGTACCTTGGATGCC...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CAA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTTCCTCCAGGAACCTTTaGGCCATCTGGCGCTCACCT +
Preference number: 5 (lower is better)
Translates to: FSLGEENHQASQLWLGNSSSRNL*AIWRSP
Trigger: AGGTGAGCGCCAGATGGCCAAAAGGTTCCTGGAGGA...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGCTCTTCCACCTCCTaGTCCTTGTCTTGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: GQVASKKLGSERFALSLGSSSTS*SLSCSS
Trigger: ACTGCTGCAAGACAAGGACAAGGAGGTGGAAGAGCT...TCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCTCGAGGTGTGCCTGGTaGAGTTTGTCCTCCATTGGA +
Preference number: 5 (lower is better)
Translates to: WERKTTRLLSYGLATLEFSRCAW*SLSSIG
Trigger: TCCAATGGAGGACAAACTCAACCAGGCACACCTCGA...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCCTCATAGCCCTGCAGTaGGTCTTGGCACTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLLIALQ*VLALSQ
Trigger: CTGGCTGAGTGCCAAGACCAACTGCAGGGCTATGAG...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCACTCGCCATCTCCAGCTaGTCCCCCTGGTGTTCGATC +
Preference number: 5 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPLAISS*SPWCSI
Trigger: GATCGAACACCAGGGGGACAAGCTGGAGATGGCGAG...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCGAGAGTGCGTGCTCCTaGGTTTGTTCCACCTGCCTC +
Preference number: 5 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLESACS*VCSTCL
Trigger: GAGGCAGGTGGAACAAACCAAGGAGCACGCACTCTC...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGAGAGTGCGTGCTCCTaGGTTTGTTCCACCTGCCTC +
Preference number: 5 (lower is better)
Translates to: FSLGEENHQASQLWLGNSESACS*VCSTCL
Trigger: GAGGCAGGTGGAACAAACCAAGGAGCACGCACTCTC...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGTCAAGGTCCAGGATTTaGTTCTGGGCTGCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWSRSRI*FWAARS
Trigger: GGAGCGAGCAGCCCAGAACAAAATCCTGGACCTTGA...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCTGGCTCAATTCCGTTTaGGTTCTGCTCAGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: WERKTTRLLSYGLATLEFWLNSV*VLLSWV
Trigger: GACCCAGCTGAGCAGAACCAAAACGGAATTGAGCCA...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGCTCAATTCCGTTTaGGTTCTGCTCAGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: ASKKLGSERFALSLGREPWLNSV*VLLSWV
Trigger: GACCCAGCTGAGCAGAACCAAAACGGAATTGAGCCA...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCATTCTGCATGCTGCGGTaGGTGCTCTCGGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPFCMLR*VLSDCS
Trigger: GGAGCAGTCCGAGAGCACCAACCGCAGCATGCAGAA...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCAGTTGGATGAAAACTaGGGAGGCGCTCCTCTACTG +
Preference number: 5 (lower is better)
Translates to: WERKTTRLLSYGLATLEFQLDEN*GGAPLL
Trigger: CAGTAGAGGAGCGCCTCCCAAGTTTTCATCCAACTG...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGAGCGGTCCTTCATGGTaGGCTTCCGTTCCAGAACAG +
Preference number: 5 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWSGPSW*ASVPEQ
Trigger: CTGTTCTGGAACGGAAGCCAACCATGAAGGACCGCT...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393527.7
CDS TCA 90 bp CACTTAACCGCATCACTGAGACCAGCTTTTCTGAAGATGGTGGCGTaGTCTCCAGGCAATGAGGTGGATTCTCCCACTTGCATCCCACAG +
Preference number: 5 (lower is better)
Translates to: HLTASLRPAFLKMVA*SPGNEVDSPTCIPQ
Trigger: CTGTGGGATGCAAGTGGGAGAATCCACCTCATTGCCTGGAGATCACGCCACCATCTTCAGAAAAGCTGGTCTCAGTGATGCGGTTAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000372814.7
ENST00000393533.6
ENST00000434106.7
ENST00000469582.6
ENST00000497812.6
ENST00000604420.5
CDS GCA 90 bp ACAGTTACACTGGGTGCGCCACAAGGTGCTCTCAAGACCTTTTTCTaGGTGAGACTCGTTACTCCGTTCTTCCCACACGATGGAAACCAG +
Preference number: 5 (lower is better)
Translates to: TVTLGAPQGALKTFF*VRLVTPFFPHDGNQ
Trigger: CTGGTTTCCATCGTGTGGGAAGAACGGAGTAACGAGTCTCACGCAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000351030.7
ENST00000372814.7
ENST00000421776.6
ENST00000448249.7
ENST00000546203.5
CDS GCA 90 bp ACAGTTACACTGGGTGCGCCACAAGGTGCTCTCAAGACCTTTTTCTaGGTGAGACTCGTTACTCCGTTCTTCCCACACGATGGAAACCTG +
Preference number: 5 (lower is better)
Translates to: TVTLGAPQGALKTFF*VRLVTPFFPHDGNL
Trigger: CAGGTTTCCATCGTGTGGGAAGAACGGAGTAACGAGTCTCACGCAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000372791.7
ENST00000393527.7
ENST00000432065.6
ENST00000434106.7
ENST00000444993.6
ENST00000446274.5
ENST00000469582.6
ENST00000470061.5
ENST00000604420.5
CDS GCA 90 bp ACAGTTACACTGGGTGCGCCACAAGGTGCTCTCAAGACCTTTTTCTaGGTGAGACTCGTTACTCCGTTCTTCCCACACGATGGAAACCTC +
Preference number: 5 (lower is better)
Translates to: TVTLGAPQGALKTFF*VRLVTPFFPHDGNL
Trigger: GAGGTTTCCATCGTGTGGGAAGAACGGAGTAACGAGTCTCACGCAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497812.6
CDS-3UTR CAA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGTGCCTTGTCAGGGTGTaGATGTCCGTGCAGGTCATT +
Preference number: 5 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWCLVRV*MSVQVI
Trigger: AATGACCTGCACGGACATCAACACCCTGACAAGGCA...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCATCTCGGAGGGTGCGGTaGGTCTCCTCAAATGTGCTC +
Preference number: 5 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPSRRVR*VSSNVL
Trigger: GAGCACATTTGAGGAGACCAACCGCACCCTCCGAGA...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACTCCACCTCCTTGTCCTaGTCTTGCAGCAGTAACAGC +
Preference number: 5 (lower is better)
Translates to: KLGSERFALSLGREPWENSTSLS*SCSSNS
Trigger: GCTGTTACTGCTGCAAGACAAGGACAAGGAGGTGGA...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTAAGCTCTTCCACCTCCTaGTCCTTGTCTTGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLSSSTS*SLSCSS
Trigger: ACTGCTGCAAGACAAGGACAAGGAGGTGGAAGAGCT...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCACTGTTCTCAGCCTCTTaGGACCGAAGCTGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPLFSAS*DRSCAC
Trigger: GCAGGCACAGCTTCGGTCCAAAGAGGCTGAGAACAG...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCTGTGCCTGGTTGAGTTaGTCCTCCATTGGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: WERKTTRLLSYGLATLEFCAWLS*SSIGAK
Trigger: CTTTGCTCCAATGGAGGACAAACTCAACCAGGCACA...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGAGGATCTTGTTCTCTTaGTCACAGCGTTCTAGCTGG +
Preference number: 5 (lower is better)
Translates to: HWERKTTRLLSYGLATLERILFS*SQRSSW
Trigger: CCAGCTAGAACGCTGTGACAAAGAGAACAAGATCCT...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGATTGCCTCCTCCCTCTaGGCAATCACCTGTAGGAAC +
Preference number: 5 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWIASSL*AITCRN
Trigger: GTTCCTACAGGTGATTGCCAAGAGGGAGGAGGCAAT...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGCACTCTCCAACTGCCTaGCCAGGGTCCCACATTCCC +
Preference number: 5 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLHSPTA*PGSHIP
Trigger: GGGAATGTGGGACCCTGGCAAGGCAGTTGGAGAGTG...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTTCAAGGTCCAGGATTTaGTTCTGGGCTGCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: FSLGEENHQASQLWLGNSSRSRI*FWAARS
Trigger: GGAGCGAGCAGCCCAGAACAAAATCCTGGACCTTGA...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGGCGATCTTTCAGGTCTaGCAGCCGGCTCTGGTAGCG +
Preference number: 5 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLAIFQV*QPALVA
Trigger: CGCTACCAGAGCCGGCTGCAAGACCTGAAAGATCGC...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACGCGATCTTTCAGGTCTaGCAGCCGGCTCTGGTAGCG +
Preference number: 5 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNAIFQV*QPALVA
Trigger: CGCTACCAGAGCCGGCTGCAAGACCTGAAAGATCGC...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCGCGATCTTTCAGGTCTaGCAGCCGGCTCTGGTAGCG +
Preference number: 5 (lower is better)
Translates to: FQQVTISGRRKPSASCFTAIFQV*QPALVA
Trigger: CGCTACCAGAGCCGGCTGCAAGACCTGAAAGATCGC...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTACTTGGGAAGGGAGCCTaGGGAAAACACCACACTTGT +
Preference number: 5 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLLGKGA*GKHHTC
Trigger: ACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAG...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAAGGTTTGCACTGAGCTaGGGAAGGGAGCCTTGGGAA +
Preference number: 5 (lower is better)
Translates to: VYCEVLGGKWPQRNLGVRRFALS*GREPWE
Trigger: TTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCT...TCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCCGCAAAGGTGGGCAATaGGGTCAGCAGGCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: FQQVTISGRRKPSASCFTRKGGQ*GQQALL
Trigger: GAGCAGAGCCTGCTGACCCAATTGCCCACCTTTGCG...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACACCACACTTGTGATGCACAGCTCCTCCTaGGATTTAGTGAAGCACAGC +
Preference number: 5 (lower is better)
Translates to: ERFALSLGREPWENTTLVMHSSS*DLVKHS
Trigger: GCTGTGCTTCACTAAATCCAAGGAGGAGCTGTGCAT...CACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393527.7
CDS TCA 90 bp CACTTAACCGCATCACTGAGACCAGCTTTTCTGAAGATGGTGGCGTaGTCTCCAGGCAATGAGGTGGATTCTTGGTTTTCACCCGGACAC +
Preference number: 5 (lower is better)
Translates to: HLTASLRPAFLKMVA*SPGNEVDSWFSPGH
Trigger: GTGTCCGGGTGAAAACCAAGAATCCACCTCATTGCCTGGAGATCACGCCACCATCTTCAGAAAAGCTGGTCTCAGTGATGCGGTTAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372791.7
ENST00000393527.7
ENST00000444119.6
ENST00000446274.5
ENST00000546203.5
CDS GCA 90 bp ACAGTTACACTGGGTGCGCCACAAGGTGCTCTCAAGACCTTTTTCTaGGTGAGACTCGTTACTCCGTTCTTCCCACACGATGGAAACCTA +
Preference number: 5 (lower is better)
Translates to: TVTLGAPQGALKTFF*VRLVTPFFPHDGNL
Trigger: TAGGTTTCCATCGTGTGGGAAGAACGGAGTAACGAGTCTCACGCAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393533.6
CDS GCA 90 bp CTTCATGGTTGGCTTCGTCACAGTTACACTGGGTGCGCCACAAGGTaGTCTCAAGACCTTTTTCTGCGTGAGACTCGTTACTCCGTTCTT +
Preference number: 5 (lower is better)
Translates to: LHGWLRHSYTGCATR*SQDLFLRETRYSVL
Trigger: AAGAACGGAGTAACGAGTCTCACGCAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGTGACGAAGCCAACCATGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444993.6
CDS GCA 90 bp CATAGGGCAAATATGGCCATCCCGATATACACACACTGTCCTCAGTaGACTTCCAGGATGCCTTCCAATTTAAGGAGCTCTGCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: HRANMAIPIYTHCPQ*TSRMPSNLRSSAGP
Trigger: AGGCCCTGCAGAGCTCCTTAAATTGGAAGGCATCCTGGAAGTGCACTGAGGACAGTGTGTGTATATCGGGATGGCCATATTTGCCCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488909.1
CDS CCA 90 bp CAAAGAAATCTGCAGATCAGCAAGGCGACCAAAGAACTGTGCAGCTaGAGCAACTGGTTAGAGAACAGAGTGAAGGGTGGGAACGCAGAG +
Preference number: 5 (lower is better)
Translates to: QRNLQISKATKELCS*SNWLENRVKGGNAE
Trigger: CTCTGCGTTCCCACCCTTCACTCTGTTCTCTAACCAGTTGCTCCAGCTGCACAGTTCTTTGGTCGCCTTGCTGATCTGCAGATTTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488909.1
CDS CCA 90 bp ATTGCCTCCTCCCTCTTGGCAATCACCTGTAGGAACTCGATATTCTaGGCACTGGTCGCCTCCAGTTTCCTAGGTGAAAGCACTCAATCA +
Preference number: 5 (lower is better)
Translates to: IASSLLAITCRNSIF*ALVASSFLGESTQS
Trigger: TGATTGAGTGCTTTCACCTAGGAAACTGGAGGCGACCAGTGCCCAGAATATCGAGTTCCTACAGGTGATTGCCAAGAGGGAGGAGGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488909.1
CDS-3UTR CAA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGCTGGCGCTCACCTTTTaGCATCTTGACCTCAGACTT +
Preference number: 5 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWLALTF*HLDLRL
Trigger: AAGTCTGAGGTCAAGATGCAAAAAGGTGAGCGCCAG...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTTTCATGCGCTCGATGTaGTGCCTCAACACCGTGTTC +
Preference number: 5 (lower is better)
Translates to: FSLGEENHQASQLWLGNSFMRSM*CLNTVF
Trigger: GAACACGGTGTTGAGGCACAACATCGAGCGCATGAA...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTACTTTCAGAATCCTCTTaGCAGTGCTGTTCCCTCAGG +
Preference number: 5 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLLSESS*QCCSLR
Trigger: CCTGAGGGAACAGCACTGCAAAGAGGATTCTGAAAG...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TTTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCAGCTCTTCCACCTCCTaGTCCTTGTCTTGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: FFTGRGKPPGFSAMAWQLSSSTS*SLSCSS
Trigger: ACTGCTGCAAGACAAGGACAAGGAGGTGGAAGAGCT...GAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGCTGTTCTCAGCCTCTTaGGACCGAAGCTGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLLFSAS*DRSCAC
Trigger: GCAGGCACAGCTTCGGTCCAAAGAGGCTGAGAACAG...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGCTTTTCTTTTACAACTaGGTTGTAGCGGCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: HWERKTTRLLSYGLATLELFFYN*VVAAPP
Trigger: TGGAGGAGCCGCTACAACCAAGTTGTAAAAGAAAAG...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGTGCCTGGTTGAGTTaGTCCTCCATTGGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: ERKTTRLLSYGLATLEFLCAWLS*SSIGAK
Trigger: CTTTGCTCCAATGGAGGACAAACTCAACCAGGCACA...TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp CACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGGCCGCCTCAATCTCTTaGTTCATCTCATCTTTAAGG +
Preference number: 5 (lower is better)
Translates to: HWERKTTRLLSYGLATLEAASIS*FISSLR
Trigger: CCTTAAAGATGAGATGAACAAAGAGATTGAGGCGGC...CTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCTCATAGCCCTGCAGTaGGTCTTGGCACTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNLIALQ*VLALSQ
Trigger: CTGGCTGAGTGCCAAGACCAACTGCAGGGCTATGAG...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTTGGCTCAATTCCGTTTaGGTTCTGCTCAGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: FSLGEENHQASQLWLGNSWLNSV*VLLSWV
Trigger: GACCCAGCTGAGCAGAACCAAAACGGAATTGAGCCA...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGCTTCTCAGCTATGGCTaGGCAACTCTGGAGTTCCTA +
Preference number: 5 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWLLSYG*ATLEFL
Trigger: TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAG...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGTCTATTGTGAAGTGCTaGGGGGCAAGTGGCCTCAAA +
Preference number: 5 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWSIVKC*GASGLK
Trigger: TTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGA...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACTCTATTGTGAAGTGCTaGGGGGCAAGTGGCCTCAAA +
Preference number: 5 (lower is better)
Translates to: KLGSERFALSLGREPWENSIVKC*GASGLK
Trigger: TTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGA...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS TCA 90 bp TGCTCAGCTTCTGCAGGAGAAGTTCCTTCTGCCTTGTCAGGGTGTTaGTGTCCGTGCAGGTCATTTGTTTCTCTGTTTTCAGCTTCCCGA +
Preference number: 5 (lower is better)
Translates to: CSASAGEVPSALSGC*CPCRSFVSLFSASR
Trigger: TCGGGAAGCTGAAAACAGAGAAACAAATGACCTGCACGGACATCAACACCCTGACAAGGCAGAAGGAACTTCTCCTGCAGAAGCTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS TCA 90 bp CACCTGACTCTTATAGTTGTCAATCATCCCCTCATAGTTCTTCACTaGGGCCTTCAGCTGCTGGACCTCGAGGTGTGCCTGGTTGAGTTT +
Preference number: 5 (lower is better)
Translates to: HLTLIVVNHPLIVLH*GLQLLDLEVCLVEF
Trigger: AAACTCAACCAGGCACACCTCGAGGTCCAGCAGCTGAAGGCCTCAGTGAAGAACTATGAGGGGATGATTGACAACTATAAGAGTCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS TCA 90 bp TTACACTGGGTGCGCCACAAGGTGCTCTCAAGACCTTTTTCTGCGTaGGACTCGTTACTCCGTTCTTCCCACACGATGGAAACCTATTCT +
Preference number: 5 (lower is better)
Translates to: LHWVRHKVLSRPFSA*DSLLRSSHTMETYS
Trigger: AGAATAGGTTTCCATCGTGTGGGAAGAACGGAGTAACGAGTCTCACGCAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393533.6
CDS TCA 90 bp CTCCCACAGCAAAGGGACTTCAGCTACACCACTCAACATCTTGTGTaGCCAGCCATAGGGCAAATATGGCCATCCCGATATACACACACT +
Preference number: 5 (lower is better)
Translates to: LPQQRDFSYTTQHLV*PAIGQIWPSRYTHT
Trigger: AGTGTGTGTATATCGGGATGGCCATATTTGCCCTATGGCTGGTCACACAAGATGTTGAGTGGTGTAGCTGAAGTCCCTTTGCTGTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488909.1
CDS TCA 90 bp GAGCAACTGGTTAGAGAACAGAGTGAAGGGTGGGAACGCAGAGACTaGCCGTGGGCTTTGTTAAGTGTGGATAGCATCACATGGAACACA +
Preference number: 5 (lower is better)
Translates to: EQLVREQSEGWERRD*PWALLSVDSITWNT
Trigger: TGTGTTCCATGTGATGCTATCCACACTTAACAAAGCCCACGGTCAGTCTCTGCGTTCCCACCCTTCACTCTGTTCTCTAACCAGTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488909.1
CDS GCA 90 bp TCGCTTGTGAGATTTCGTCACAGTTACACTGGGTGCGCCACAAGGTaGTCTCAAGACCTTTTTCTGCGTGAGACTCGTTACTCCGTTCTT +
Preference number: 5 (lower is better)
Translates to: SLVRFRHSYTGCATR*SQDLFLRETRYSVL
Trigger: AAGAACGGAGTAACGAGTCTCACGCAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGTGACGAAATCTCACAAGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000372791.7
ENST00000372814.7
ENST00000393533.6
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000446274.5
ENST00000470061.5
ENST00000497812.6
ENST00000546203.5
ENST00000604420.5
CDS-3UTR CAA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCATTCATGCGCTCGATGTaGTGCCTCAACACCGTGTTC +
Preference number: 5 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPFMRSM*CLNTVF
Trigger: GAACACGGTGTTGAGGCACAACATCGAGCGCATGAA...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTGTCCGTGCAGGTCATTaGTTTCTCTGTTTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: ASKKLGSERFALSLGREPVRAGH*FLCFQL
Trigger: AAGCTGAAAACAGAGAAACAAATGACCTGCACGGAC...AGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGACTTTCAGAATCCTCTTaGCAGTGCTGTTCCCTCAGG +
Preference number: 5 (lower is better)
Translates to: VYCEVLGGKWPQRNLGVRLSESS*QCCSLR
Trigger: CCTGAGGGAACAGCACTGCAAAGAGGATTCTGAAAG...TCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp TGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCAGAGGCTGTCTTTGCTaGAGCCTTCTCACATTGTAT +
Preference number: 5 (lower is better)
Translates to: WERKTTRLLSYGLATLEFRGCLC*SLLTLY
Trigger: ATACAATGTGAGAAGGCTCAAGCAAAGACAGCCTCT...GAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGACTCCTCCAGGGTTTGTaGTTGGTTTACAAGATCTGT +
Preference number: 5 (lower is better)
Translates to: GQVASKKLGSERFALSLGLLQGL*LVYKIC
Trigger: ACAGATCTTGTAAACCAACAACAAACCCTGGAGGAG...TCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACTCAAGGTCCAGGATTTaGTTCTGGGCTGCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNSRSRI*FWAARS
Trigger: GGAGCGAGCAGCCCAGAACAAAATCCTGGACCTTGA...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGACCATCCCCAAACACGTaGGCGTATGATGATTTGAGG +
Preference number: 5 (lower is better)
Translates to: VYCEVLGGKWPQRNLGVRPSPNT*AYDDLR
Trigger: CCTCAAATCATCATACGCCAACGTGTTTGGGGATGG...TCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTCTTCTCAGCTATGGCTaGGCAACTCTGGAGTTCCTA +
Preference number: 5 (lower is better)
Translates to: FSLGEENHQASQLWLGNSLLSYG*ATLEFL
Trigger: TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAG...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTTCTATTGTGAAGTGCTaGGGGGCAAGTGGCCTCAAA +
Preference number: 5 (lower is better)
Translates to: FSLGEENHQASQLWLGNSSIVKC*GASGLK
Trigger: TTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGA...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS GCA 90 bp TTGGTCTCCTCAAATGTGCTCAGCTTCTGCAGGAGAAGTTCCTTCTaGCTTGTCAGGGTGTTGATGTCCGTGCAGGTCATTTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LVSSNVLSFCRRSSF*LVRVLMSVQVICFS
Trigger: AGAGAAACAAATGACCTGCACGGACATCAACACCCTGACAAGGCAGAAGGAACTTCTCCTGCAGAAGCTGAGCACATTTGAGGAGACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS GCA 90 bp ATAAGCCAAAGAAATCTGCAGATCAGCAAGGCGACCAAAGAACTGTaGAGCTGGAGCAACTGGTTAGAGAACAGAGTGAAGGGTGGGAAC +
Preference number: 5 (lower is better)
Translates to: ISQRNLQISKATKEL*SWSNWLENRVKGGN
Trigger: GTTCCCACCCTTCACTCTGTTCTCTAACCAGTTGCTCCAGCTGCACAGTTCTTTGGTCGCCTTGCTGATCTGCAGATTTCTTTGGCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488909.1
CDS-3UTR CAA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCATGCGCTCGATGTaGTGCCTCAACACCGTGTTC +
Preference number: 5 (lower is better)
Translates to: FQQVTISGRRKPSASCFTFMRSM*CLNTVF
Trigger: GAACACGGTGTTGAGGCACAACATCGAGCGCATGAA...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGGTCCGTGCAGGTCATTaGTTTCTCTGTTTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWVRAGH*FLCFQL
Trigger: AAGCTGAAAACAGAGAAACAAATGACCTGCACGGAC...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGTCCACCTCCTTGTCCTaGTCTTGCAGCAGTAACAGC +
Preference number: 5 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLSTSLS*SCSSNS
Trigger: GCTGTTACTGCTGCAAGACAAGGACAAGGAGGTGGA...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGTTGAGCCTTCTCACATaGTATTTCCTGAAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWLSLLT*YFLKEL
Trigger: GAGCTCCTTCAGGAAATACAATGTGAGAAGGCTCAA...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGAGAGGCTGTCTTTGCTaGAGCCTTCTCACATTGTAT +
Preference number: 5 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWRGCLC*SLLTLY
Trigger: ATACAATGTGAGAAGGCTCAAGCAAAGACAGCCTCT...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GTCTATTGTGAAGTGCTTGGGGGCAAGTGGCCTCAAAGAAACTTGGGAGTGAGACTCTCATTCTCCAGCTaGAATGCGGAATACTCAGCA +
Preference number: 5 (lower is better)
Translates to: VYCEVLGGKWPQRNLGVRLSFSS*NAEYSA
Trigger: TGCTGAGTATTCCGCATTCAAGCTGGAGAATGAGAG...TCTCACTCCCAAGTTTCTTTGAGGCCACTTGCCCCCAAGCACTTCACAATAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTAGGATCTTGTTCTCTTaGTCACAGCGTTCTAGCTGG +
Preference number: 5 (lower is better)
Translates to: FSLGEENHQASQLWLGNSRILFS*SQRSSW
Trigger: CCAGCTAGAACGCTGTGACAAAGAGAACAAGATCCT...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp AAACTTGGGAGTGAGAGGTTTGCACTGAGCTTGGGAAGGGAGCCTTGGGAAAACGCCGCCTCAATCTCTTaGTTCATCTCATCTTTAAGG +
Preference number: 5 (lower is better)
Translates to: KLGSERFALSLGREPWENAASIS*FISSLR
Trigger: CCTTAAAGATGAGATGAACAAAGAGATTGAGGCGGC...GTTTTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCTCTCACTCCCAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCGCCCTGCAGTTGGTCTaGGCACTCAGCCAGCTTCGC +
Preference number: 5 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCALQLV*ALSQLR
Trigger: GCGAAGCTGGCTGAGTGCCAAGACCAACTGCAGGGC...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCACTTCTCAGCTATGGCTaGGCAACTCTGGAGTTCCTA +
Preference number: 5 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPLLSYG*ATLEFL
Trigger: TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAG...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCCAGTTGGATGAAAACTaGGGAGGCGCTCCTCTACTG +
Preference number: 5 (lower is better)
Translates to: FQQVTISGRRKPSASCFTQLDEN*GGAPLL
Trigger: CAGTAGAGGAGCGCCTCCCAAGTTTTCATCCAACTG...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS TCA 90 bp TCAGAAATGAAGAAACTGAGCCTCAGAGAGGGGAATTCATTGGCCTaGAGTCAGCACAGCTGGCAAGTCTGTAACCAAAACCTAAGCCTG +
Preference number: 5 (lower is better)
Translates to: SEMKKLSLREGNSLA*SQHSWQVCNQNLSL
Trigger: CAGGCTTAGGTTTTGGTTACAGACTTGCCAGCTGTGCTGACTTCAGGCCAATGAATTCCCCTCTCTGAGGCTCAGTTTCTTCATTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488909.1
CDS GCA 90 bp ACAAAAATGGTTGATCGTCACAGTTACACTGGGTGCGCCACAAGGTaGTCTCAAGACCTTTTTCTGCGTGAGACTCGTTACTCCGTTCTT +
Preference number: 5 (lower is better)
Translates to: TKMVDRHSYTGCATR*SQDLFLRETRYSVL
Trigger: AAGAACGGAGTAACGAGTCTCACGCAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGTGACGATCAACCATTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000448249.7
ENST00000469582.6
CDS CCA 90 bp AGGCTATCCCGGTCTTCCCGCATCTTCTCCTCCAGGGTTTGTTGTTaGTTTACAAGATCTGTTACCCGGTCATTCAGGACAATAATTTCC +
Preference number: 5 (lower is better)
Translates to: RLSRSSRIFSSRVCC*FTRSVTRSFRTIIS
Trigger: GGAAATTATTGTCCTGAATGACCGGGTAACAGATCTTGTAAACCAACAACAAACCCTGGAGGAGAAGATGCGGGAAGACCGGGATAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS-3UTR CAA 90 bp AGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTGGAGTTCCTATGGTCACCTTTTTGCATCTaGACCTCAGACTTCAGACAA +
Preference number: 5 (lower is better)
Translates to: RKTTRLLSYGLATLEFLWSPFCI*TSDFRQ
Trigger: TTGTCTGAAGTCTGAGGTCAAGATGCAAAAAGGTGA...CCATAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGCTGGCGCTCACCTTTTaGCATCTTGACCTCAGACTT +
Preference number: 5 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLLALTF*HLDLRL
Trigger: AAGTCTGAGGTCAAGATGCAAAAAGGTGAGCGCCAG...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp CAGGCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTATCTCGGAGGGTGCGGTaGGTCTCCTCAAATGTGCTC +
Preference number: 5 (lower is better)
Translates to: QAPSTLKMSTGCPAAFYLSRRVR*VSSNVL
Trigger: GAGCACATTTGAGGAGACCAACCGCACCCTCCGAGA...TAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CAA 90 bp TTTTCACTGGGAGAGGAAAACCACCAGGCTTCTCAGCTATGGCTTGGCAACTCTCTCCTCCAGGGTTTGTaGTTGGTTTACAAGATCTGT +
Preference number: 5 (lower is better)
Translates to: FSLGEENHQASQLWLGNSLLQGL*LVYKIC
Trigger: ACAGATCTTGTAAACCAACAACAAACCCTGGAGGAG...AGAGTTGCCAAGCCATAGCTGAGAAGCCTGGTGGTTTTCCTCTCCCAGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCGCTGGGACTGGTGGATaGCCTCCTCCCTCTTGGCAA +
Preference number: 5 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFAGTGG*PPPSWQ
Trigger: TTGCCAAGAGGGAGGAGGCAATCCACCAGTCCCAGC...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCGCTGGGACTGGTGGATaGCCTCCTCCCTCTTGGCAA +
Preference number: 5 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCAGTGG*PPPSWQ
Trigger: TTGCCAAGAGGGAGGAGGCAATCCACCAGTCCCAGC...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGCCATCCCCAAACACGTaGGCGTATGATGATTTGAGG +
Preference number: 5 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLPSPNT*AYDDLR
Trigger: CCTCAAATCATCATACGCCAACGTGTTTGGGGATGG...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCCCATCCCCAAACACGTaGGCGTATGATGATTTGAGG +
Preference number: 5 (lower is better)
Translates to: FQQVTISGRRKPSASCFTPSPNT*AYDDLR
Trigger: CCTCAAATCATCATACGCCAACGTGTTTGGGGATGG...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACTGGCCTCAAAGAAACTaGGGAGTGAGAGGTTTGCAC +
Preference number: 5 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNWPQRN*GVRGLH
Trigger: GTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCA...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTGGCCTCAAAGAAACTaGGGAGTGAGAGGTTTGCAC +
Preference number: 5 (lower is better)
Translates to: FQQVTISGRRKPSASCFTWPQRN*GVRGLH
Trigger: GTGCAAACCTCTCACTCCCAAGTTTCTTTGAGGCCA...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCCGCCTTATGAAGTCGTaGAAGTCGGAGGCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCRLMKS*KSEARV
Trigger: GACCCTGGCCTCCGACTTCAACGACTTCATAAGGCG...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTCCTCCAGGAACCTTTaGGCCATCTGGCGCTCACCT +
Preference number: 5 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDSSRNL*AIWRSP
Trigger: AGGTGAGCGCCAGATGGCCAAAAGGTTCCTGGAGGA...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCAGTCCGTGCAGGTCATTaGTTTCTCTGTTTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPVRAGH*FLCFQL
Trigger: AAGCTGAAAACAGAGAAACAAATGACCTGCACGGAC...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTCTCGGAGGGTGCGGTaGGTCTCCTCAAATGTGCTC +
Preference number: 5 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCSRRVR*VSSNVL
Trigger: GAGCACATTTGAGGAGACCAACCGCACCCTCCGAGA...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCACTTTTCTTTTACAACTaGGTTGTAGCGGCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPLFFYN*VVAAPP
Trigger: TGGAGGAGCCGCTACAACCAAGTTGTAAAAGAAAAG...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCTCTCATTCTCCAGCTaGAATGCGGAATACTCAGCA +
Preference number: 5 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNLSFSS*NAEYSA
Trigger: TGCTGAGTATTCCGCATTCAAGCTGGAGAATGAGAG...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTCATAGCCCTGCAGTaGGTCTTGGCACTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFLIALQ*VLALSQ
Trigger: CTGGCTGAGTGCCAAGACCAACTGCAGGGCTATGAG...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCGAGAGTGCGTGCTCCTaGGTTTGTTCCACCTGCCTC +
Preference number: 5 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFESACS*VCSTCL
Trigger: GAGGCAGGTGGAACAAACCAAGGAGCACGCACTCTC...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS CCA 90 bp TTTCTTTTACAACTTGGTTGTAGCGGCTCCTCCAGGATTCCAGAGTaGATAAAGCTTCAGCGACATAAAGATCCTTGTCAGCGAGTTGCA +
Preference number: 5 (lower is better)
Translates to: FLLQLGCSGSSRIPE*IKLQRHKDPCQRVA
Trigger: TGCAACTCGCTGACAAGGATCTTTATGTCGCTGAAGCTTTATCCACTCTGGAATCCTGGAGGAGCCGCTACAACCAAGTTGTAAAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS-3UTR CAA 90 bp GCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCCATCACCTTTTTGCATCTaGACCTCAGACTTCAGACAA +
Preference number: 5 (lower is better)
Translates to: AAFGTFLELVAKDKTLNPSPFCI*TSDFRQ
Trigger: TTGTCTGAAGTCTGAGGTCAAGATGCAAAAAGGTGA...TGGGTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp CAGGCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTATTCATGCGCTCGATGTaGTGCCTCAACACCGTGTTC +
Preference number: 5 (lower is better)
Translates to: QAPSTLKMSTGCPAAFYLFMRSM*CLNTVF
Trigger: GAACACGGTGTTGAGGCACAACATCGAGCGCATGAA...TAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CAA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCGTCCGTGCAGGTCATTaGTTTCTCTGTTTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: FQQVTISGRRKPSASCFTVRAGH*FLCFQL
Trigger: AAGCTGAAAACAGAGAAACAAATGACCTGCACGGAC...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTGAGCCTTCTCACATaGTATTTCCTGAAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: FQQVTISGRRKPSASCFTLSLLT*YFLKEL
Trigger: GAGCTCCTTCAGGAAATACAATGTGAGAAGGCTCAA...GGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACTTGAGCCTTCTCACATaGTATTTCCTGAAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNLSLLT*YFLKEL
Trigger: GAGCTCCTTCAGGAAATACAATGTGAGAAGGCTCAA...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGAGAGGCTGTCTTTGCTaGAGCCTTCTCACATTGTAT +
Preference number: 5 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLRGCLC*SLLTLY
Trigger: ATACAATGTGAGAAGGCTCAAGCAAAGACAGCCTCT...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCTTTTCTTTTACAACTaGGTTGTAGCGGCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNLFFYN*VVAAPP
Trigger: TGGAGGAGCCGCTACAACCAAGTTGTAAAAGAAAAG...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TCTGCTGCTTTTGGGACTTTTCTAGAGCTAGTAGCTAAGGACAAGACCCTGAACCTCCTCCAGGGTTTGTaGTTGGTTTACAAGATCTGT +
Preference number: 5 (lower is better)
Translates to: SAAFGTFLELVAKDKTLNLLQGL*LVYKIC
Trigger: ACAGATCTTGTAAACCAACAACAAACCCTGGAGGAG...GTTCAGGGTCTTGTCCTTAGCTACTAGCTCTAGAAAAGTCCCAAAAGCAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGTCGAGGTGTGCCTGGTaGAGTTTGTCCTCCATTGGA +
Preference number: 5 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKSRCAW*SLSSIG
Trigger: TCCAATGGAGGACAAACTCAACCAGGCACACCTCGA...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTCAAGGTCCAGGATTTaGTTCTGGGCTGCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCSRSRI*FWAARS
Trigger: GGAGCGAGCAGCCCAGAACAAAATCCTGGACCTTGA...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp CAGGCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTACTTGGGAAGGGAGCCTaGGGAAAACACCACACTTGT +
Preference number: 5 (lower is better)
Translates to: QAPSTLKMSTGCPAAFYLLGKGA*GKHHTC
Trigger: ACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAG...TAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CAA 90 bp ATATATACTGTACACTACCCCATCCTCTTCCTAATAGCTAAAGTGATCTACCCTAGGTTTGCACTGAGCTaGGGAAGGGAGCCTTGGGAA +
Preference number: 5 (lower is better)
Translates to: IYTVHYPILFLIAKVIYPRFALS*GREPWE
Trigger: TTCCCAAGGCTCCCTTCCCAAGCTCAGTGCAAACCT...AGGGTAGATCACTTTAGCTATTAGGAAGAGGATGGGGTAGTGTACAGTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CAA 90 bp ACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGCTTCACCTTCTGAGGGATGAGGACTGGTaGGGTAAAGGAAATCATCAA +
Preference number: 5 (lower is better)
Translates to: TGDYIRKEKTKCFLLHLLRDEDW*GKGNHQ
Trigger: TTGATGATTTCCTTTACCCAACCAGTCCTCATCCCT...CAGAAGGTGAAGCAGGAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CAA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGCAGTTGGATGAAAACTaGGGAGGCGCTCCTCTACTG +
Preference number: 5 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKQLDEN*GGAPLL
Trigger: CAGTAGAGGAGCGCCTCCCAAGTTTTCATCCAACTG...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTGCCTTGTCAGGGTGTaGATGTCCGTGCAGGTCATT +
Preference number: 5 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCCLVRV*MSVQVI
Trigger: AATGACCTGCACGGACATCAACACCCTGACAAGGCA...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGCTTTCAGAATCCTCTTaGCAGTGCTGTTCCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKLSESS*QCCSLR
Trigger: CCTGAGGGAACAGCACTGCAAAGAGGATTCTGAAAG...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTCCACCTCCTTGTCCTaGTCTTGCAGCAGTAACAGC +
Preference number: 5 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCSTSLS*SCSSNS
Trigger: GCTGTTACTGCTGCAAGACAAGGACAAGGAGGTGGA...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCAGCTCTTCCACCTCCTaGTCCTTGTCTTGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCSSSTS*SLSCSS
Trigger: ACTGCTGCAAGACAAGGACAAGGAGGTGGAAGAGCT...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTCGAGGTGTGCCTGGTaGAGTTTGTCCTCCATTGGA +
Preference number: 5 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCSRCAW*SLSSIG
Trigger: TCCAATGGAGGACAAACTCAACCAGGCACACCTCGA...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTCGAGGTGTGCCTGGTaGAGTTTGTCCTCCATTGGA +
Preference number: 5 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDSRCAW*SLSSIG
Trigger: TCCAATGGAGGACAAACTCAACCAGGCACACCTCGA...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCATTGCCTCCTCCCTCTaGGCAATCACCTGTAGGAAC +
Preference number: 5 (lower is better)
Translates to: APSTLKMSTGCPAAFYLIIASSL*AITCRN
Trigger: GTTCCTACAGGTGATTGCCAAGAGGGAGGAGGCAAT...GATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCATTGCCTCCTCCCTCTaGGCAATCACCTGTAGGAAC +
Preference number: 5 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCIASSL*AITCRN
Trigger: GTTCCTACAGGTGATTGCCAAGAGGGAGGAGGCAAT...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp ATATATACTGTACACTACCCCATCCTCTTCCTAATAGCTAAAGTGATCTACCCTATTGCCTCCTCCCTCTaGGCAATCACCTGTAGGAAC +
Preference number: 5 (lower is better)
Translates to: IYTVHYPILFLIAKVIYPIASSL*AITCRN
Trigger: GTTCCTACAGGTGATTGCCAAGAGGGAGGAGGCAAT...AGGGTAGATCACTTTAGCTATTAGGAAGAGGATGGGGTAGTGTACAGTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCCTTGGGAAGGGAGCCTaGGGAAAACACCACACTTGT +
Preference number: 5 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCLGKGA*GKHHTC
Trigger: ACAAGTGTGGTGTTTTCCCAAGGCTCCCTTCCCAAG...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCCTGGCGCTCACCTTTTaGCATCTTGACCTCAGACTT +
Preference number: 5 (lower is better)
Translates to: APSTLKMSTGCPAAFYLILALTF*HLDLRL
Trigger: AAGTCTGAGGTCAAGATGCAAAAAGGTGAGCGCCAG...GATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CAA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTGGCGCTCACCTTTTaGCATCTTGACCTCAGACTT +
Preference number: 5 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFLALTF*HLDLRL
Trigger: AAGTCTGAGGTCAAGATGCAAAAAGGTGAGCGCCAG...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACCTTTCAGAATCCTCTTaGCAGTGCTGTTCCCTCAGG +
Preference number: 5 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDLSESS*QCCSLR
Trigger: CCTGAGGGAACAGCACTGCAAAGAGGATTCTGAAAG...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTGTGCCTGGTTGAGTTaGTCCTCCATTGGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDCAWLS*SSIGAK
Trigger: CTTTGCTCCAATGGAGGACAAACTCAACCAGGCACA...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCTGTGCCTGGTTGAGTTaGTCCTCCATTGGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFCAWLS*SSIGAK
Trigger: CTTTGCTCCAATGGAGGACAAACTCAACCAGGCACA...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCCATCCCCAAACACGTaGGCGTATGATGATTTGAGG +
Preference number: 5 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFPSPNT*AYDDLR
Trigger: CCTCAAATCATCATACGCCAACGTGTTTGGGGATGG...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACCTTCTCAGCTATGGCTaGGCAACTCTGGAGTTCCTA +
Preference number: 5 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDLLSYG*ATLEFL
Trigger: TAGGAACTCCAGAGTTGCCAAGCCATAGCTGAGAAG...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp CCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCATTTCCACCTCCTTGTCCTaGTCTTGCAGCAGTAACAGC +
Preference number: 5 (lower is better)
Translates to: PSTLKMSTGCPAAFYLIISTSLS*SCSSNS
Trigger: GCTGTTACTGCTGCAAGACAAGGACAAGGAGGTGGA...AATGATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GCACCAAGTACTTTAAAAATGTCTACTGGCTGTCCTGCAGCATTTTACTTAATCCTCTCATTCTCCAGCTaGAATGCGGAATACTCAGCA +
Preference number: 5 (lower is better)
Translates to: APSTLKMSTGCPAAFYLILSFSS*NAEYSA
Trigger: TGCTGAGTATTCCGCATTCAAGCTGGAGAATGAGAG...GATTAAGTAAAATGCTGCAGGACAGCCAGTAGACATTTTTAAAGTACTTGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CAA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTCTCATTCTCCAGCTaGAATGCGGAATACTCAGCA +
Preference number: 5 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFLSFSS*NAEYSA
Trigger: TGCTGAGTATTCCGCATTCAAGCTGGAGAATGAGAG...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp ATATATACTGTACACTACCCCATCCTCTTCCTAATAGCTAAAGTGATCTACCCTAGGATCTTGTTCTCTTaGTCACAGCGTTCTAGCTGG +
Preference number: 5 (lower is better)
Translates to: IYTVHYPILFLIAKVIYPRILFS*SQRSSW
Trigger: CCAGCTAGAACGCTGTGACAAAGAGAACAAGATCCT...AGGGTAGATCACTTTAGCTATTAGGAAGAGGATGGGGTAGTGTACAGTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CAA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCAGGATCTTGTTCTCTTaGTCACAGCGTTCTAGCTGG +
Preference number: 5 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCRILFS*SQRSSW
Trigger: CCAGCTAGAACGCTGTGACAAAGAGAACAAGATCCT...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp TTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGAGGGATGAGGACTGGTaGGGTAAAGGAAATCATCAA +
Preference number: 5 (lower is better)
Translates to: LRPVEEILTLPTGDYIRKRDEDW*GKGNHQ
Trigger: TTGATGATTTCCTTTACCCAACCAGTCCTCATCCCT...CTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CAA 90 bp ATATATACTGTACACTACCCCATCCTCTTCCTAATAGCTAAAGTGATCTACCCTTTGAGCCTTCTCACATaGTATTTCCTGAAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: IYTVHYPILFLIAKVIYPLSLLT*YFLKEL
Trigger: GAGCTCCTTCAGGAAATACAATGTGAGAAGGCTCAA...AGGGTAGATCACTTTAGCTATTAGGAAGAGGATGGGGTAGTGTACAGTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CAA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTTTTCTTTTACAACTaGGTTGTAGCGGCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFLFFYN*VVAAPP
Trigger: TGGAGGAGCCGCTACAACCAAGTTGTAAAAGAAAAG...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp ATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCTTCCTCCTCCAGGGTTTGTaGTTGGTTTACAAGATCTGT +
Preference number: 5 (lower is better)
Translates to: ILTLPTGDYIRKEKTKCFLLQGL*LVYKIC
Trigger: ACAGATCTTGTAAACCAACAACAAACCCTGGAGGAG...GAAGCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GAAATTTTAACACTTCCAACAGGTGACTATATCAGGAAGGAGAAAACCAAGTGCGCCGCCTCAATCTCTTaGTTCATCTCATCTTTAAGG +
Preference number: 5 (lower is better)
Translates to: EILTLPTGDYIRKEKTKCAASIS*FISSLR
Trigger: CCTTAAAGATGAGATGAACAAAGAGATTGAGGCGGC...GCACTTGGTTTTCTCCTTCCTGATATAGTCACCTGTTGGAAGTGTTAAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000604420.5
CDS-3UTR CAA 90 bp GTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACACTTCCAACAGGTGACGCCGCCTCAATCTCTTaGTTCATCTCATCTTTAAGG +
Preference number: 5 (lower is better)
Translates to: VVVNLRPVEEILTLPTGDAASIS*FISSLR
Trigger: CCTTAAAGATGAGATGAACAAAGAGATTGAGGCGGC...GTCACCTGTTGGAAGTGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS-3UTR CAA 90 bp ATATATACTGTACACTACCCCATCCTCTTCCTAATAGCTAAAGTGATCTACCCTTCACCTTTTTGCATCTaGACCTCAGACTTCAGACAA +
Preference number: 5 (lower is better)
Translates to: IYTVHYPILFLIAKVIYPSPFCI*TSDFRQ
Trigger: TTGTCTGAAGTCTGAGGTCAAGATGCAAAAAGGTGA...AGGGTAGATCACTTTAGCTATTAGGAAGAGGATGGGGTAGTGTACAGTATATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351030.7
ENST00000434106.7
CDS-3UTR CAA 90 bp ATGTGGTACCCTAATGTAGTAGTAAATTTAAGGCCTGTCGAGGAAATTTTAACATCACCTTTTTGCATCTaGACCTCAGACTTCAGACAA +
Preference number: 5 (lower is better)
Translates to: MWYPNVVVNLRPVEEILTSPFCI*TSDFRQ
Trigger: TTGTCTGAAGTCTGAGGTCAAGATGCAAAAAGGTGA...TGTTAAAATTTCCTCGACAGGCCTTAAATTTACTACTACATTAGGGTACCACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
CDS TCA 72 bp AACCTGAGGCGCCGGCGGACGTGCGGAGAGGGCGGGTaGGAACCGCTCGGCCCCAAGTGGGCCCCAGAGGGC +
Preference number: 6 (lower is better)
Translates to: NLRRRRTCGEGG*EPLGPKWAPEG
Trigger: GCCCTCTGGGGCCCACTTGGGGCCGAGCGGTTCTCACCCGCCCTCTCCGCACGTCCGCCGGCGCCTCAGGTT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372791.7
ENST00000470061.5
CDS CCA 72 bp GGGTCGTGCCATGGAGACGCCGCGGCGGATGCAGTCTaGCTCTGGCAGCGGCTCCTCCCCGCTTCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: GSCHGDAAADAV*LWQRLLPASAS
Trigger: GGAGGCGGAAGCGGGGAGGAGCCGCTGCCAGAGCCAGACTGCATCCGCCGCGGCGTCTCCATGGCACGACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000372814.7
ENST00000469582.6
CDS GCA 72 bp GAGGCCAGGGTCGTGCCATGGAGACGCCGCGGCGGATaGAGTCTGGCTCTGGCAGCGGCTCCTCCCCGCTTC +
Preference number: 6 (lower is better)
Translates to: EARVVPWRRRGG*SLALAAAPPRF
Trigger: GAAGCGGGGAGGAGCCGCTGCCAGAGCCAGACTGCATCCGCCGCGGCGTCTCCATGGCACGACCCTGGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000372814.7
ENST00000444993.6
ENST00000469582.6
CDS CAA 90 bp CAGGAGCGACACGGCTGCGCCCAGAAACGCCGCCTTATGAAGTCGTaGAAGTCGGAGGCCAGGGTCGTGCCATGGAGACGCCGCGGCGGA +
Preference number: 6 (lower is better)
Translates to: QERHGCAQKRRLMKS*KSEARVVPWRRRGG
Trigger: TCCGCCGCGGCGTCTCCATGGCACGACCCTGGCCTCCGACTTCAACGACTTCATAAGGCGGCGTTTCTGGGCGCAGCCGTGTCGCTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351030.7
ENST00000372814.7
ENST00000444993.6
ENST00000469582.6
ENST00000604420.5
CDS GCA 72 bp TACCGGTTTCTGCCCATAGAGAGAAAGGTGAAGCCCTaGCCGCGGGCGGCAGAGGAGGGGCAGAGCCCCGTG +
Preference number: 6 (lower is better)
Translates to: YRFLPIERKVKP*PRAAEEGQSPV
Trigger: CACGGGGCTCTGCCCCTCCTCTGCCGCCCGCGGGCAGGGCTTCACCTTTCTCTCTATGGGCAGAAACCGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000446274.5
ENST00000546203.5
CDS CAA 90 bp GCTGCGGTTGGTGCTCTCGGACTGCTCCAGGCGATCTTTCAGGTCTaGCAGCCGGCTCTGGTAGCGGCGGTCCGCATCATCACGGCTCCG +
Preference number: 6 (lower is better)
Translates to: AAVGALGLLQAIFQV*QPALVAAVRIITAP
Trigger: CGGAGCCGTGATGATGCGGACCGCCGCTACCAGAGCCGGCTGCAAGACCTGAAAGATCGCCTGGAGCAGTCCGAGAGCACCAACCGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000488909.1
ENST00000604420.5
CDS GCA 72 bp CGGGCCCCTGCTCGGGTCAGTTCGTGGGACCCTTTCTaGCAGTCCCTTACCCGGCTGCGCAGGTCTGATATG +
Preference number: 6 (lower is better)
Translates to: RAPARVSSWDPF*QSLTRLRRSDM
Trigger: CATATCAGACCTGCGCAGCCGGGTAAGGGACTGGCAGAAAGGGTCCCACGAACTGACCCGAGCAGGGGCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372791.7
ENST00000372814.7
ENST00000393533.6
ENST00000448249.7
ENST00000546203.5
CDS CCA 72 bp CATCTTGGTATGCGGGCCCCTGCTCGGGTCAGTTCGTaGGACCCTTTCTGCCAGTCCCTTACCCGGCTGCGC +
Preference number: 6 (lower is better)
Translates to: HLGMRAPARVSS*DPFCQSLTRLR
Trigger: GCGCAGCCGGGTAAGGGACTGGCAGAAAGGGTCCCACGAACTGACCCGAGCAGGGGCCCGCATACCAAGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372791.7
ENST00000372814.7
ENST00000393533.6
ENST00000448249.7
ENST00000546203.5
CDS CCA 72 bp ATGAAGTCGTTGAAGTCGGAGGCCAGGGTCGTGCCATaGAGACGCCGCGGCGGATGCAGTCTGGCTCTGGCA +
Preference number: 6 (lower is better)
Translates to: MKSLKSEARVVP*RRRGGCSLALA
Trigger: TGCCAGAGCCAGACTGCATCCGCCGCGGCGTCTCCATGGCACGACCCTGGCCTCCGACTTCAACGACTTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351030.7
ENST00000372814.7
ENST00000444993.6
ENST00000469582.6
CDS CAA 72 bp CACGGCTGCGCCCAGAAACGCCGCCTTATGAAGTCGTaGAAGTCGGAGGCCAGGGTCGTGCCATGGAGACGC +
Preference number: 6 (lower is better)
Translates to: HGCAQKRRLMKS*KSEARVVPWRR
Trigger: GCGTCTCCATGGCACGACCCTGGCCTCCGACTTCAACGACTTCATAAGGCGGCGTTTCTGGGCGCAGCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351030.7
ENST00000372814.7
ENST00000444993.6
ENST00000448249.7
ENST00000469582.6
ENST00000604420.5
CDS CAA 72 bp GGTGCTCTCGGACTGCTCCAGGCGATCTTTCAGGTCTaGCAGCCGGCTCTGGTAGCGGCGGTCCGCATCATC +
Preference number: 6 (lower is better)
Translates to: GALGLLQAIFQV*QPALVAAVRII
Trigger: GATGATGCGGACCGCCGCTACCAGAGCCGGCTGCAAGACCTGAAAGATCGCCTGGAGCAGTCCGAGAGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000488909.1
ENST00000604420.5
CDS CCA 72 bp CCTATGGCTTCCATCAGGGCTCCAGGCCCTGATAAGTaGCCTCAGGCAGGAGGAGATCGGGAGCGGATGGGA +
Preference number: 6 (lower is better)
Translates to: PMASIRAPGPDK*PQAGGDRERMG
Trigger: TCCCATCCGCTCCCGATCTCCTCCTGCCTGAGGCCACTTATCAGGGCCTGGAGCCCTGATGGAAGCCATAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351030.7
ENST00000393527.7
ENST00000434106.7
ENST00000488909.1
ENST00000604420.5
CDS CAA 72 bp CCCGCCTCGGCCTTCCAAAGTGCTTGTATTACAGGCTaGAGCCTCCGCGCCCGGTCTACTACCCTCCTGCAC +
Preference number: 6 (lower is better)
Translates to: PASAFQSACITG*SLRARSTTLLH
Trigger: GTGCAGGAGGGTAGTAGACCGGGCGCGGAGGCTCAAGCCTGTAATACAAGCACTTTGGAAGGCCGAGGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497812.6
CDS CAA 90 bp GATGAGGCAGACATGGCTAGGCATCAAAGCCGCAAAGGTGGGCAATaGGGTCAGCAGGCTCTGCTCAGGGGGACCCAGAGGGGCAGGCTT +
Preference number: 6 (lower is better)
Translates to: DEADMARHQSRKGGQ*GQQALLRGTQRGRL
Trigger: AAGCCTGCCCCTCTGGGTCCCCCTGAGCAGAGCCTGCTGACCCAATTGCCCACCTTTGCGGCTTTGATGCCTAGCCATGTCTGCCTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000372791.7
ENST00000393527.7
ENST00000432065.6
ENST00000434106.7
ENST00000444993.6
ENST00000446274.5
ENST00000469582.6
ENST00000470061.5
ENST00000604420.5
CDS TCA 72 bp CCGCCTCGGCCTTCCAAAGTGCTTGTATTACAGGCTTaGGCCTCCGCGCCCGGTCTACTACCCTCCTGCACT +
Preference number: 6 (lower is better)
Translates to: PPRPSKVLVLQA*ASAPGLLPSCT
Trigger: AGTGCAGGAGGGTAGTAGACCGGGCGCGGAGGCTCAAGCCTGTAATACAAGCACTTTGGAAGGCCGAGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497812.6
CDS GCA 72 bp AAAGCCGCAAAGGTGGGCAATTGGGTCAGCAGGCTCTaGTCAGGGGGACCCAGAGGGGCAGGCTTGTCAATG +
Preference number: 6 (lower is better)
Translates to: KAAKVGNWVSRL*SGGPRGAGLSM
Trigger: CATTGACAAGCCTGCCCCTCTGGGTCCCCCTGAGCAGAGCCTGCTGACCCAATTGCCCACCTTTGCGGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000372791.7
ENST00000393527.7
ENST00000432065.6
ENST00000434106.7
ENST00000444993.6
ENST00000446274.5
ENST00000469582.6
ENST00000470061.5
ENST00000604420.5
CDS CCA 72 bp ACATGGCTAGGCATCAAAGCCGCAAAGGTGGGCAATTaGGTCAGCAGGCTCTGCTCAGGGGGACCCAGAGGG +
Preference number: 6 (lower is better)
Translates to: TWLGIKAAKVGN*VSRLCSGGPRG
Trigger: CCCTCTGGGTCCCCCTGAGCAGAGCCTGCTGACCCAATTGCCCACCTTTGCGGCTTTGATGCCTAGCCATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000372791.7
ENST00000393527.7
ENST00000432065.6
ENST00000434106.7
ENST00000444993.6
ENST00000446274.5
ENST00000469582.6
ENST00000470061.5
ENST00000604420.5
CDS CAA 72 bp GACATGGCTAGGCATCAAAGCCGCAAAGGTGGGCAATaGGGTCAGCAGGCTCTGCTCAGGGGGACCCAGAGG +
Preference number: 6 (lower is better)
Translates to: DMARHQSRKGGQ*GQQALLRGTQR
Trigger: CCTCTGGGTCCCCCTGAGCAGAGCCTGCTGACCCAATTGCCCACCTTTGCGGCTTTGATGCCTAGCCATGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000372791.7
ENST00000393527.7
ENST00000432065.6
ENST00000434106.7
ENST00000444993.6
ENST00000446274.5
ENST00000469582.6
ENST00000470061.5
ENST00000604420.5
CDS CAA 72 bp TGGAGCCTGGAAGGAGCCCACTTGGTTGTAGCCTCCTaGCAAGTGCACTGGCCACCTGAGGCACTTAGGGCC +
Preference number: 6 (lower is better)
Translates to: WSLEGAHLVVAS*QVHWPPEALRA
Trigger: GGCCCTAAGTGCCTCAGGTGGCCAGTGCACTTGCAAGGAGGCTACAACCAAGTGGGCTCCTTCCAGGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488909.1
CDS GCA 72 bp ATGCGCTCGATGTTGTGCCTCAACACCGTGTTCTCGTaGTCAGTCTCAGCCAGTTCGTGGGCCACCTCCTCC +
Preference number: 6 (lower is better)
Translates to: MRSMLCLNTVFS*SVSASSWATSS
Trigger: GGAGGAGGTGGCCCACGAACTGGCTGAGACTGAGCACGAGAACACGGTGTTGAGGCACAACATCGAGCGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS GCA 72 bp CCAAGTCGCACAGCAACTGTCCAGGAGCGACACGGCTaGGCCCAGAAACGCCGCCTTATGAAGTCGTTGAAG +
Preference number: 6 (lower is better)
Translates to: PSRTATVQERHG*AQKRRLMKSLK
Trigger: CTTCAACGACTTCATAAGGCGGCGTTTCTGGGCGCAGCCGTGTCGCTCCTGGACAGTTGCTGTGCGACTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000444993.6
ENST00000469582.6
ENST00000604420.5
CDS CAA 90 bp TTCTCCTCCAGCCGCAGCTGGGACTGGTGGATTGCCTCCTCCCTCTaGGCAATCACCTGTAGGAACTCGATATTCTGGGCACTGGTCGCC +
Preference number: 6 (lower is better)
Translates to: FSSSRSWDWWIASSL*AITCRNSIFWALVA
Trigger: GGCGACCAGTGCCCAGAATATCGAGTTCCTACAGGTGATTGCCAAGAGGGAGGAGGCAATCCACCAGTCCCAGCTGCGGCTGGAGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CAA 90 bp GGCTGTGAGGTCGATGTTCTTCCGCTCATAGCCCTGCAGTTGGTCTaGGCACTCAGCCAGCTTCGCCTCCGTGATCTTCAGGATGTCAGG +
Preference number: 6 (lower is better)
Translates to: GCEVDVLPLIALQLV*ALSQLRLRDLQDVR
Trigger: CCTGACATCCTGAAGATCACGGAGGCGAAGCTGGCTGAGTGCCAAGACCAACTGCAGGGCTATGAGCGGAAGAACATCGACCTCACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000483070.2
ENST00000546203.5
ENST00000604420.5
CDS CAA 90 bp AGCTGGGTCTCAAGGTCCAGGATTTTGTTCTGGGCTGCTCGCTCCTaGGAGAGTGCGTGCTCCTTGGTTTGTTCCACCTGCCTCCTCGCA +
Preference number: 6 (lower is better)
Translates to: SWVSRSRILFWAARS*ESACSLVCSTCLLA
Trigger: TGCGAGGAGGCAGGTGGAACAAACCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCCAGAACAAAATCCTGGACCTTGAGACCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CAA 90 bp CGGTCCGCATCATCACGGCTCCGCCGCAGCTGGCTCAATTCCGTTTaGGTTCTGCTCAGCTGGGTCTCAAGGTCCAGGATTTTGTTCTGG +
Preference number: 6 (lower is better)
Translates to: RSASSRLRRSWLNSV*VLLSWVSRSRILFW
Trigger: CCAGAACAAAATCCTGGACCTTGAGACCCAGCTGAGCAGAACCAAAACGGAATTGAGCCAGCTGCGGCGGAGCCGTGATGATGCGGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000488909.1
ENST00000604420.5
CDS TCA 72 bp TTCAGGATGTCAGGGAGCTGCTGCAGGTCAGCCAGCTaGGACTGGAACTGCCTTCGTGCCGCCTCAATCTCT +
Preference number: 6 (lower is better)
Translates to: FRMSGSCCRSAS*DWNCLRAASIS
Trigger: AGAGATTGAGGCGGCACGAAGGCAGTTCCAGTCTCAGCTGGCTGACCTGCAGCAGCTCCCTGACATCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS TCA 72 bp CTTGTCCCCCTGGTGTTCGATCCGGCTGCGCAGGTCTaGTATGATGGCTGTGAGGTCGATGTTCTTCCGCTC +
Preference number: 6 (lower is better)
Translates to: LVPLVFDPAAQV*YDGCEVDVLPL
Trigger: GAGCGGAAGAACATCGACCTCACAGCCATCATATCAGACCTGCGCAGCCGGATCGAACACCAGGGGGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000604420.5
CDS TCA 72 bp CCCTTTCTGCCAGTCCCTTACCCGGCTGCGCAGGTCTaGTATGATGGCTGTGAGGTCGATGTTCTTCCGCTC +
Preference number: 6 (lower is better)
Translates to: PFLPVPYPAAQV*YDGCEVDVLPL
Trigger: GAGCGGAAGAACATCGACCTCACAGCCATCATATCAGACCTGCGCAGCCGGGTAAGGGACTGGCAGAAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372791.7
ENST00000372814.7
ENST00000393533.6
ENST00000448249.7
ENST00000546203.5
CDS GCA 72 bp AATTTAAGGAGCTCTGCAGGGCCTGGGGGATCTAGCTaGCATTTCCAAGGCTGGCAGGGCAGAGCAGAGGTG +
Preference number: 6 (lower is better)
Translates to: NLRSSAGPGGSS*HFQGWQGRAEV
Trigger: CACCTCTGCTCTGCCCTGCCAGCCTTGGAAATGGCAGCTAGATCCCCCAGGCCCTGCAGAGCTCCTTAAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488909.1
CDS GCA 72 bp CTCCGCGCCCGGTCTACTACCCTCCTGCACTCTCTATaGCGCTCTGTGTACAGACCTATTCTGATGAGGTCC +
Preference number: 6 (lower is better)
Translates to: LRARSTTLLHSL*RSVYRPILMRS
Trigger: GGACCTCATCAGAATAGGTCTGTACACAGAGCGGCATAGAGAGTGCAGGAGGGTAGTAGACCGGGCGCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497812.6
CDS CCA 72 bp ACTGAGGCCTTCAGCTGCTGGACCTCGAGGTGTGCCTaGTTGAGTTTGTCCTCCATTGGAGCAAAGCTGGCC +
Preference number: 6 (lower is better)
Translates to: TEAFSCWTSRCA*LSLSSIGAKLA
Trigger: GGCCAGCTTTGCTCCAATGGAGGACAAACTCAACCAGGCACACCTCGAGGTCCAGCAGCTGAAGGCCTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS CCA 72 bp GCCGCAGCTGGGACTGGTGGATTGCCTCCTCCCTCTTaGCAATCACCTGTAGGAACTCGATATTCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: AAAGTGGLPPPS*QSPVGTRYSGH
Trigger: GTGCCCAGAATATCGAGTTCCTACAGGTGATTGCCAAGAGGGAGGAGGCAATCCACCAGTCCCAGCTGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CCA 72 bp TCTGGGCTGCTCGCTCCTTGGAGAGTGCGTGCTCCTTaGTTTGTTCCACCTGCCTCCTCGCATCTTCAATGG +
Preference number: 6 (lower is better)
Translates to: SGLLAPWRVRAP*FVPPASSHLQW
Trigger: CCATTGAAGATGCGAGGAGGCAGGTGGAACAAACCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CCA 72 bp CTGCTCAGCTGGGTCTCAAGGTCCAGGATTTTGTTCTaGGCTGCTCGCTCCTTGGAGAGTGCGTGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: LLSWVSRSRILF*AARSLESACSL
Trigger: CAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCCAGAACAAAATCCTGGACCTTGAGACCCAGCTGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CAA 72 bp CAGTGCTGTTCCCTCAGGAGGTCTCGGAGGGTGCGGTaGGTCTCCTCAAATGTGCTCAGCTTCTGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: QCCSLRRSRRVR*VSSNVLSFCRR
Trigger: TCTCCTGCAGAAGCTGAGCACATTTGAGGAGACCAACCGCACCCTCCGAGACCTCCTGAGGGAACAGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS CAA 72 bp GAGGCCTTCAGCTGCTGGACCTCGAGGTGTGCCTGGTaGAGTTTGTCCTCCATTGGAGCAAAGCTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: EAFSCWTSRCAW*SLSSIGAKLAF
Trigger: GAAGGCCAGCTTTGCTCCAATGGAGGACAAACTCAACCAGGCACACCTCGAGGTCCAGCAGCTGAAGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS CAA 72 bp GGCTGCTCGCTCCTTGGAGAGTGCGTGCTCCTTGGTTaGTTCCACCTGCCTCCTCGCATCTTCAATGGCACT +
Preference number: 6 (lower is better)
Translates to: GCSLLGECVLLG*FHLPPRIFNGT
Trigger: AGTGCCATTGAAGATGCGAGGAGGCAGGTGGAACAAACCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CAA 72 bp AAGAAAAGCCTGGGCAAGGGTGAGCCTACCTCCCACTaGCATCCCACAGGCCGGGCAGATGATTTTCCAGGG +
Preference number: 6 (lower is better)
Translates to: KKSLGKGEPTSH*HPTGRADDFPG
Trigger: CCCTGGAAAATCATCTGCCCGGCCTGTGGGATGCAAGTGGGAGGTAGGCTCACCCTTGCCCAGGCTTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444993.6
CDS TCA 72 bp AGGCCTTCAGCTGCTGGACCTCGAGGTGTGCCTGGTTaGGTTTGTCCTCCATTGGAGCAAAGCTGGCCTTCA +
Preference number: 6 (lower is better)
Translates to: RPSAAGPRGVPG*VCPPLEQSWPS
Trigger: TGAAGGCCAGCTTTGCTCCAATGGAGGACAAACTCAACCAGGCACACCTCGAGGTCCAGCAGCTGAAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS TCA 72 bp GCCTACCTCCCACTTGCATCCCACAGGCCGGGCAGATaGTTTTCCAGGGGGCATCCAAGGTACCTTGGTTTT +
Preference number: 6 (lower is better)
Translates to: AYLPLASHRPGR*FSRGHPRYLGF
Trigger: AAAACCAAGGTACCTTGGATGCCCCCTGGAAAATCATCTGCCCGGCCTGTGGGATGCAAGTGGGAGGTAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444993.6
CDS GCA 72 bp TTCTTCCCACACGATGGAAACCAGGAGCGACACGGCTaGGCCCAGAAACGCCGCCTTATGAAGTCGTTGAAG +
Preference number: 6 (lower is better)
Translates to: FFPHDGNQERHG*AQKRRLMKSLK
Trigger: CTTCAACGACTTCATAAGGCGGCGTTTCTGGGCGCAGCCGTGTCGCTCCTGGTTTCCATCGTGTGGGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000372814.7
ENST00000448249.7
CDS GCA 72 bp GGAGGTCTCGGAGGGTGCGGTTGGTCTCCTCAAATGTaGTCAGCTTCTGCAGGAGAAGTTCCTTCTGCCTTG +
Preference number: 6 (lower is better)
Translates to: GGLGGCGWSPQM*SASAGEVPSAL
Trigger: CAAGGCAGAAGGAACTTCTCCTGCAGAAGCTGAGCACATTTGAGGAGACCAACCGCACCCTCCGAGACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS GCA 72 bp ACCTGCCTCCTCGCATCTTCAATGGCACTCTCCAACTaGCTTGCCAGGGTCCCACATTCCCGTGTTTTCTCC +
Preference number: 6 (lower is better)
Translates to: TCLLASSMALSN*LARVPHSRVFS
Trigger: GGAGAAAACACGGGAATGTGGGACCCTGGCAAGGCAGTTGGAGAGTGCCATTGAAGATGCGAGGAGGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CCA 72 bp AGTGCTGTTCCCTCAGGAGGTCTCGGAGGGTGCGGTTaGTCTCCTCAAATGTGCTCAGCTTCTGCAGGAGAA +
Preference number: 6 (lower is better)
Translates to: SAVPSGGLGGCG*SPQMCSASAGE
Trigger: TTCTCCTGCAGAAGCTGAGCACATTTGAGGAGACCAACCGCACCCTCCGAGACCTCCTGAGGGAACAGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS CCA 72 bp CAAGGTCCAGGATTTTGTTCTGGGCTGCTCGCTCCTTaGAGAGTGCGTGCTCCTTGGTTTGTTCCACCTGCC +
Preference number: 6 (lower is better)
Translates to: QGPGFCSGLLAP*RVRAPWFVPPA
Trigger: GGCAGGTGGAACAAACCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCCAGAACAAAATCCTGGACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CCA 72 bp CTGCGTGAGACTCGTTACTCCGTTCTTCCCACACGATaGAAACCTCATGATCCACCCGCCTCGGCCTTCCAA +
Preference number: 6 (lower is better)
Translates to: LRETRYSVLPTR*KPHDPPASAFQ
Trigger: TTGGAAGGCCGAGGCGGGTGGATCATGAGGTTTCCATCGTGTGGGAAGAACGGAGTAACGAGTCTCACGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497812.6
CDS CAA 72 bp TTCAGCTGCTGGACCTCGAGGTGTGCCTGGTTGAGTTaGTCCTCCATTGGAGCAAAGCTGGCCTTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: FSCWTSRCAWLS*SSIGAKLAFSL
Trigger: GAGGCTGAAGGCCAGCTTTGCTCCAATGGAGGACAAACTCAACCAGGCACACCTCGAGGTCCAGCAGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS CAA 72 bp GTCGATGTTCTTCCGCTCATAGCCCTGCAGTTGGTCTaGGCACTCAGCCAGCTTCGCCTCCGTGATCTTCAG +
Preference number: 6 (lower is better)
Translates to: VDVLPLIALQLV*ALSQLRLRDLQ
Trigger: CTGAAGATCACGGAGGCGAAGCTGGCTGAGTGCCAAGACCAACTGCAGGGCTATGAGCGGAAGAACATCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000483070.2
ENST00000546203.5
ENST00000604420.5
CDS CAA 72 bp TGTGAGGTCGATGTTCTTCCGCTCATAGCCCTGCAGTaGGTCTTGGCACTCAGCCAGCTTCGCCTCCGTGAT +
Preference number: 6 (lower is better)
Translates to: CEVDVLPLIALQ*VLALSQLRLRD
Trigger: ATCACGGAGGCGAAGCTGGCTGAGTGCCAAGACCAACTGCAGGGCTATGAGCGGAAGAACATCGACCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000483070.2
ENST00000546203.5
ENST00000604420.5
CDS CAA 72 bp AGCCGCAGCTGGGACTGGTGGATTGCCTCCTCCCTCTaGGCAATCACCTGTAGGAACTCGATATTCTGGGCA +
Preference number: 6 (lower is better)
Translates to: SRSWDWWIASSL*AITCRNSIFWA
Trigger: TGCCCAGAATATCGAGTTCCTACAGGTGATTGCCAAGAGGGAGGAGGCAATCCACCAGTCCCAGCTGCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CAA 72 bp GTGTTTTCTCCTCCAGCCGCAGCTGGGACTGGTGGATaGCCTCCTCCCTCTTGGCAATCACCTGTAGGAACT +
Preference number: 6 (lower is better)
Translates to: VFSPPAAAGTGG*PPPSWQSPVGT
Trigger: AGTTCCTACAGGTGATTGCCAAGAGGGAGGAGGCAATCCACCAGTCCCAGCTGCGGCTGGAGGAGAAAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CAA 72 bp TTCTGGGCTGCTCGCTCCTTGGAGAGTGCGTGCTCCTaGGTTTGTTCCACCTGCCTCCTCGCATCTTCAATG +
Preference number: 6 (lower is better)
Translates to: FWAARSLESACS*VCSTCLLASSM
Trigger: CATTGAAGATGCGAGGAGGCAGGTGGAACAAACCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CAA 90 bp TCCTCTTTGCAGTGCTGTTCCCTCAGGAGGTCTCGGAGGGTGCGGTaGGTCTCCTCAAATGTGCTCAGCTTCTGCAGGAGAAGTTCCTTC +
Preference number: 6 (lower is better)
Translates to: SSLQCCSLRRSRRVR*VSSNVLSFCRRSSF
Trigger: GAAGGAACTTCTCCTGCAGAAGCTGAGCACATTTGAGGAGACCAACCGCACCCTCCGAGACCTCCTGAGGGAACAGCACTGCAAAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS CAA 90 bp TTTGTTCTGGGCTGCTCGCTCCTTGGAGAGTGCGTGCTCCTTGGTTaGTTCCACCTGCCTCCTCGCATCTTCAATGGCACTCTCCAACTG +
Preference number: 6 (lower is better)
Translates to: FVLGCSLLGECVLLG*FHLPPRIFNGTLQL
Trigger: CAGTTGGAGAGTGCCATTGAAGATGCGAGGAGGCAGGTGGAACAAACCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCCAGAACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CAA 90 bp AGGATTTTGTTCTGGGCTGCTCGCTCCTTGGAGAGTGCGTGCTCCTaGGTTTGTTCCACCTGCCTCCTCGCATCTTCAATGGCACTCTCC +
Preference number: 6 (lower is better)
Translates to: RILFWAARSLESACS*VCSTCLLASSMALS
Trigger: GGAGAGTGCCATTGAAGATGCGAGGAGGCAGGTGGAACAAACCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCCAGAACAAAATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS TCA 72 bp GGGAGAAGGGTGGAAGCTTTGGGGTTGGCAGTTGGATaGAAACTTGGGAGGCGCTCCTCTACTGTCCAAGTC +
Preference number: 6 (lower is better)
Translates to: GRRVEALGLAVG*KLGRRSSTVQV
Trigger: GACTTGGACAGTAGAGGAGCGCCTCCCAAGTTTTCATCCAACTGCCAACCCCAAAGCTTCCACCCTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000372791.7
ENST00000393527.7
ENST00000432065.6
ENST00000434106.7
ENST00000444993.6
ENST00000446274.5
ENST00000469582.6
ENST00000470061.5
ENST00000604420.5
CDS TCA 72 bp CTTGACCTCCCACTTGCATCCCACAGGCCGGGCAGATaGTTTTCCAGGGGGCATCCAAGGTACCTTGGTTTT +
Preference number: 6 (lower is better)
Translates to: LDLPLASHRPGR*FSRGHPRYLGF
Trigger: AAAACCAAGGTACCTTGGATGCCCCCTGGAAAATCATCTGCCCGGCCTGTGGGATGCAAGTGGGAGGTCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421776.6
CDS GCA 72 bp GTGAAGTCCTTCTCCTCCTTCATGCGCTCGATGTTGTaGCTCAACACCGTGTTCTCGTGCTCAGTCTCAGCC +
Preference number: 6 (lower is better)
Translates to: VKSFSSFMRSML*LNTVFSCSVSA
Trigger: GGCTGAGACTGAGCACGAGAACACGGTGTTGAGGCACAACATCGAGCGCATGAAGGAGGAGAAGGACTTCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS GCA 72 bp CAGGCGACTGTTCTCAGCCTCTTTGGACCGAAGCTGTaGCTGCAAATGCCCACGCATGGACTCCATGGATTT +
Preference number: 6 (lower is better)
Translates to: QATVLSLFGPKL*LQMPTHGLHGF
Trigger: AAATCCATGGAGTCCATGCGTGGGCATTTGCAGGCACAGCTTCGGTCCAAAGAGGCTGAGAACAGTCGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS GCA 72 bp TCCTTGGAGAGTGCGTGCTCCTTGGTTTGTTCCACCTaGCTCCTCGCATCTTCAATGGCACTCTCCAACTGC +
Preference number: 6 (lower is better)
Translates to: SLESACSLVCST*LLASSMALSNC
Trigger: GCAGTTGGAGAGTGCCATTGAAGATGCGAGGAGGCAGGTGGAACAAACCAAGGAGCACGCACTCTCCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS GCA 72 bp ATTTTGTTCTGGGCTGCTCGCTCCTTGGAGAGTGCGTaGTCCTTGGTTTGTTCCACCTGCCTCCTCGCATCT +
Preference number: 6 (lower is better)
Translates to: ILFWAARSLESA*SLVCSTCLLAS
Trigger: AGATGCGAGGAGGCAGGTGGAACAAACCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCCAGAACAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS GCA 72 bp GGCTCCGCCGCAGCTGGCTCAATTCCGTTTTGGTTCTaGTCAGCTGGGTCTCAAGGTCCAGGATTTTGTTCT +
Preference number: 6 (lower is better)
Translates to: GSAAAGSIPFWF*SAGSQGPGFCS
Trigger: AGAACAAAATCCTGGACCTTGAGACCCAGCTGAGCAGAACCAAAACGGAATTGAGCCAGCTGCGGCGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CCA 72 bp TCAGCATACTCCTCGCTCTTCTCGGCTCGCTCCTTCTaGGCTCGGATGGCCTTCTTCAAGCTCTCTTTGTCT +
Preference number: 6 (lower is better)
Translates to: SAYSSLFSARSF*ARMAFFKLSLS
Trigger: AGACAAAGAGAGCTTGAAGAAGGCCATCCGAGCCCAGAAGGAGCGAGCCGAGAAGAGCGAGGAGTATGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS CCA 72 bp CCTTGGTTTGTTCCACCTGCCTCCTCGCATCTTCAATaGCACTCTCCAACTGCCTTGCCAGGGTCCCACATT +
Preference number: 6 (lower is better)
Translates to: PWFVPPASSHLQ*HSPTALPGSHI
Trigger: AATGTGGGACCCTGGCAAGGCAGTTGGAGAGTGCCATTGAAGATGCGAGGAGGCAGGTGGAACAAACCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CCA 72 bp CAAACGTCCTCTCTGAGGGGAGAAGGGTGGAAGCTTTaGGGTTGGCAGTTGGATGAAAACTTGGGAGGCGCT +
Preference number: 6 (lower is better)
Translates to: QTSSLRGEGWKL*GWQLDENLGGA
Trigger: AGCGCCTCCCAAGTTTTCATCCAACTGCCAACCCCAAAGCTTCCACCCTTCTCCCCTCAGAGAGGACGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000372791.7
ENST00000393527.7
ENST00000432065.6
ENST00000434106.7
ENST00000444993.6
ENST00000446274.5
ENST00000469582.6
ENST00000470061.5
ENST00000604420.5
CDS CAA 72 bp TCAAGGTCCAGGATTTTGTTCTGGGCTGCTCGCTCCTaGGAGAGTGCGTGCTCCTTGGTTTGTTCCACCTGC +
Preference number: 6 (lower is better)
Translates to: SRSRILFWAARS*ESACSLVCSTC
Trigger: GCAGGTGGAACAAACCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCCAGAACAAAATCCTGGACCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CAA 90 bp TATGATGGCTGTGAGGTCGATGTTCTTCCGCTCATAGCCCTGCAGTaGGTCTTGGCACTCAGCCAGCTTCGCCTCCGTGATCTTCAGGAT +
Preference number: 6 (lower is better)
Translates to: YDGCEVDVLPLIALQ*VLALSQLRLRDLQD
Trigger: ATCCTGAAGATCACGGAGGCGAAGCTGGCTGAGTGCCAAGACCAACTGCAGGGCTATGAGCGGAAGAACATCGACCTCACAGCCATCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000483070.2
ENST00000546203.5
ENST00000604420.5
CDS TCA 72 bp TGGATTCTCCCACTTGCATCCCACAGGCCGGGCAGATaGTTTTCCAGGGGGCATCCAAGGTACCTTGGTTTT +
Preference number: 6 (lower is better)
Translates to: WILPLASHRPGR*FSRGHPRYLGF
Trigger: AAAACCAAGGTACCTTGGATGCCCCCTGGAAAATCATCTGCCCGGCCTGTGGGATGCAAGTGGGAGAATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000372814.7
ENST00000393533.6
ENST00000434106.7
ENST00000469582.6
ENST00000470061.5
ENST00000497812.6
ENST00000604420.5
CDS TCA 72 bp CAGCCCCATCCATTTCCGCCTCCACCAGCTTGGACATaGGGCACTCCTTCTCCTGTTGTAGGTGTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: QPHPFPPPPAWT*GTPSPVVGVSS
Trigger: AGAAGAAACACCTACAACAGGAGAAGGAGTGCCTCATGTCCAAGCTGGTGGAGGCGGAAATGGATGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS TCA 72 bp CTCCAGTTTCCACTGAAATGGAAGCAGCTTTTCCTCTaGGGTCTGCCTAGTACCTTCCAGGGCCTCGAGTCC +
Preference number: 6 (lower is better)
Translates to: LQFPLKWKQLFL*GLPSTFQGLES
Trigger: GGACTCGAGGCCCTGGAAGGTACTAGGCAGACCTCAGAGGAAAAGCTGCTTCCATTTCAGTGGAAACTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483070.2
CDS GCA 72 bp CTGGGTGCGCCACAAGGTGCTCTCAAGACCTTTTTCTaGGTGAGACTCGTTACTCCGTTCTTCCCACACGAT +
Preference number: 6 (lower is better)
Translates to: LGAPQGALKTFF*VRLVTPFFPHD
Trigger: ATCGTGTGGGAAGAACGGAGTAACGAGTCTCACGCAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000444993.6
ENST00000446274.5
ENST00000448249.7
ENST00000469582.6
ENST00000470061.5
ENST00000497812.6
ENST00000546203.5
ENST00000604420.5
CDS GCA 72 bp CAACTCCTTCAGCTGCTCCATGATGGCCTCCACTTCTaGCTTATGCTGATTCCCGCTGCGCTCCAGATTCTT +
Preference number: 6 (lower is better)
Translates to: QLLQLLHDGLHF*LMLIPAALQIL
Trigger: AAGAATCTGGAGCGCAGCGGGAATCAGCATAAGGCAGAAGTGGAGGCCATCATGGAGCAGCTGAAGGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS GCA 72 bp GCCTTCTTCAAGCTCTCTTTGTCTCGGTCTCCCTTCTaGTTCAACTCCTTCAGCTGCTCCATGATGGCCTCC +
Preference number: 6 (lower is better)
Translates to: AFFKLSLSRSPF*FNSFSCSMMAS
Trigger: GGAGGCCATCATGGAGCAGCTGAAGGAGTTGAAGCAGAAGGGAGACCGAGACAAAGAGAGCTTGAAGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS CCA 72 bp CGCAGCTGGCTCAATTCCGTTTTGGTTCTGCTCAGCTaGGTCTCAAGGTCCAGGATTTTGTTCTGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: RSWLNSVLVLLS*VSRSRILFWAA
Trigger: AGCAGCCCAGAACAAAATCCTGGACCTTGAGACCCAGCTGAGCAGAACCAAAACGGAATTGAGCCAGCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS CAA 72 bp TTAATCTGCATGCACAGGCGACTGTTCTCAGCCTCTTaGGACCGAAGCTGTGCCTGCAAATGCCCACGCATG +
Preference number: 6 (lower is better)
Translates to: LICMHRRLFSAS*DRSCACKCPRM
Trigger: CATGCGTGGGCATTTGCAGGCACAGCTTCGGTCCAAAGAGGCTGAGAACAGTCGCCTGTGCATGCAGATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS CAA 90 bp TCCAGATTCTTAATCTGCATGCACAGGCGACTGTTCTCAGCCTCTTaGGACCGAAGCTGTGCCTGCAAATGCCCACGCATGGACTCCATG +
Preference number: 6 (lower is better)
Translates to: SRFLICMHRRLFSAS*DRSCACKCPRMDSM
Trigger: CATGGAGTCCATGCGTGGGCATTTGCAGGCACAGCTTCGGTCCAAAGAGGCTGAGAACAGTCGCCTGTGCATGCAGATTAAGAATCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS CAA 90 bp AATTCCGTTTTGGTTCTGCTCAGCTGGGTCTCAAGGTCCAGGATTTaGTTCTGGGCTGCTCGCTCCTTGGAGAGTGCGTGCTCCTTGGTT +
Preference number: 6 (lower is better)
Translates to: NSVLVLLSWVSRSRI*FWAARSLESACSLV
Trigger: AACCAAGGAGCACGCACTCTCCAAGGAGCGAGCAGCCCAGAACAAAATCCTGGACCTTGAGACCCAGCTGAGCAGAACCAAAACGGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000483070.2
ENST00000488909.1
ENST00000604420.5
CDS TCA 72 bp GTGCGCCACAAGGTGCTCTCAAGACCTTTTTCTGCGTaGGACTCGTTACTCCGTTCTTCCCACACGATGGAA +
Preference number: 6 (lower is better)
Translates to: VRHKVLSRPFSA*DSLLRSSHTME
Trigger: TTCCATCGTGTGGGAAGAACGGAGTAACGAGTCTCACGCAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000444993.6
ENST00000446274.5
ENST00000448249.7
ENST00000469582.6
ENST00000470061.5
ENST00000497812.6
ENST00000546203.5
ENST00000604420.5
CDS TCA 72 bp GCATCACTGAGACCAGCTTTTCTGAAGATGGTGGCGTaGTCTCCAGGCAATGAGGTGGATTCTCCCACTTGC +
Preference number: 6 (lower is better)
Translates to: ASLRPAFLKMVA*SPGNEVDSPTC
Trigger: GCAAGTGGGAGAATCCACCTCATTGCCTGGAGATCACGCCACCATCTTCAGAAAAGCTGGTCTCAGTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000372814.7
ENST00000393533.6
ENST00000434106.7
ENST00000469582.6
ENST00000497812.6
ENST00000604420.5
CDS TCA 72 bp TCATTCTCCAGCTTGAATGCGGAATACTCAGCAGTCTaGCGGTGTAGTCTCTCCACCAGGCTATCCCGGTCT +
Preference number: 6 (lower is better)
Translates to: SFSSLNAEYSAV*RCSLSTRLSRS
Trigger: AGACCGGGATAGCCTGGTGGAGAGACTACACCGTCAGACTGCTGAGTATTCCGCATTCAAGCTGGAGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS TCA 72 bp GAGCAAAGCTGGCCTTCAGCCTCTCATTCTCCAGCTTaGATGCGGAATACTCAGCAGTCTGACGGTGTAGTC +
Preference number: 6 (lower is better)
Translates to: EQSWPSASHSPA*MRNTQQSDGVV
Trigger: GACTACACCGTCAGACTGCTGAGTATTCCGCATTCAAGCTGGAGAATGAGAGGCTGAAGGCCAGCTTTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS TCA 72 bp AGGGACCATCCCCAAACACGTTGGCGTATGATGATTTaGGGAACTGGACGTAGTTCTGCATGCTGCGGTTGG +
Preference number: 6 (lower is better)
Translates to: RDHPQTRWRMMI*GTGRSSACCGW
Trigger: CCAACCGCAGCATGCAGAACTACGTCCAGTTCCTCAAATCATCATACGCCAACGTGTTTGGGGATGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000488909.1
ENST00000604420.5
CDS TCA 72 bp CCAGTAGCTATAGCTGACCCTGAATCATACCGAGGCTaGGGCCTGCTAGGATCTGAGCAGTCCGAGAAGAAA +
Preference number: 6 (lower is better)
Translates to: PVAIADPESYRG*GLLGSEQSEKK
Trigger: TTTCTTCTCGGACTGCTCAGATCCTAGCAGGCCTCAGCCTCGGTATGATTCAGGGTCAGCTATAGCTACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444993.6
CDS GCA 72 bp CGACTGTTCTCAGCCTCTTTGGACCGAAGCTGTGCCTaGAAATGCCCACGCATGGACTCCATGGATTTAGAA +
Preference number: 6 (lower is better)
Translates to: RLFSASLDRSCA*KCPRMDSMDLE
Trigger: TTCTAAATCCATGGAGTCCATGCGTGGGCATTTGCAGGCACAGCTTCGGTCCAAAGAGGCTGAGAACAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS GCA 72 bp TGGCTTCGTCACAGTTACACTGGGTGCGCCACAAGGTaGTCTCAAGACCTTTTTCTGCGTGAGACTCGTTAC +
Preference number: 6 (lower is better)
Translates to: WLRHSYTGCATR*SQDLFLRETRY
Trigger: GTAACGAGTCTCACGCAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGTGACGAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444993.6
CDS GCA 72 bp GTCCTTCATGGTTGGCTTCGTCACAGTTACACTGGGTaGGCCACAAGGTGCTCTCAAGACCTTTTTCTGCGT +
Preference number: 6 (lower is better)
Translates to: VLHGWLRHSYTG*ATRCSQDLFLR
Trigger: ACGCAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGTGACGAAGCCAACCATGAAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444993.6
CDS GCA 72 bp CCAAAACCTAAGCCTGCAACTTCTGCTGTTCACTGCTaGCTCCCACAGCAAAGGGACTTCAGCTACACCACT +
Preference number: 6 (lower is better)
Translates to: PKPKPATSAVHC*LPQQRDFSYTT
Trigger: AGTGGTGTAGCTGAAGTCCCTTTGCTGTGGGAGGCAGCAGTGAACAGCAGAAGTTGCAGGCTTAGGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488909.1
CDS CCA 72 bp TCCCTCTTGGCAATCACCTGTAGGAACTCGATATTCTaGGCACTGGTCGCCTCCAGTTTCCTCTCCAGTTCA +
Preference number: 6 (lower is better)
Translates to: SLLAITCRNSIF*ALVASSFLSSS
Trigger: TGAACTGGAGAGGAAACTGGAGGCGACCAGTGCCCAGAATATCGAGTTCCTACAGGTGATTGCCAAGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351030.7
ENST00000372807.9
ENST00000393527.7
ENST00000434106.7
ENST00000444119.6
ENST00000604420.5
CDS CCA 72 bp AGCGGTCCTTCATGGTTGGCTTCGTCACAGTTACACTaGGTGCGCCACAAGGTGCTCTCAAGACCTTTTTCT +
Preference number: 6 (lower is better)
Translates to: SGPSWLASSQLH*VRHKVLSRPFS
Trigger: AGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGTGACGAAGCCAACCATGAAGGACCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444993.6
CDS CCA 72 bp TCCCTCTTGGCAATCACCTGTAGGAACTCGATATTCTaGGCACTGGTCGCCTCCAGTTTCCTAGGTGAAAGC +
Preference number: 6 (lower is better)
Translates to: SLLAITCRNSIF*ALVASSFLGES
Trigger: GCTTTCACCTAGGAAACTGGAGGCGACCAGTGCCCAGAATATCGAGTTCCTACAGGTGATTGCCAAGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488909.1
CDS CAA 72 bp ATGGTGAAGTCCTTCTCCTCCTTCATGCGCTCGATGTaGTGCCTCAACACCGTGTTCTCGTGCTCAGTCTCA +
Preference number: 6 (lower is better)
Translates to: MVKSFSSFMRSM*CLNTVFSCSVS
Trigger: TGAGACTGAGCACGAGAACACGGTGTTGAGGCACAACATCGAGCGCATGAAGGAGGAGAAGGACTTCACCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS CAA 90 bp CTCCACCAGGCTATCCCGGTCTTCCCGCATCTTCTCCTCCAGGGTTaGTTGTTGGTTTACAAGATCTGTTACCCGGTCATTCAGGACAAT +
Preference number: 6 (lower is better)
Translates to: LHQAIPVFPHLLLQG*LLVYKICYPVIQDN
Trigger: ATTGTCCTGAATGACCGGGTAACAGATCTTGTAAACCAACAACAAACCCTGGAGGAGAAGATGCGGGAAGACCGGGATAGCCTGGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS TCA 72 bp CTTATAGTTGTCAATCATCCCCTCATAGTTCTTCACTaGGGCCTTCAGCTGCTGGACCTCGAGGTGTGCCTG +
Preference number: 6 (lower is better)
Translates to: LIVVNHPLIVLH*GLQLLDLEVCL
Trigger: CAGGCACACCTCGAGGTCCAGCAGCTGAAGGCCTCAGTGAAGAACTATGAGGGGATGATTGACAACTATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS GCA 72 bp GTTGATCGTCACAGTTACACTGGGTGCGCCACAAGGTaGTCTCAAGACCTTTTTCTGCGTGAGACTCGTTAC +
Preference number: 6 (lower is better)
Translates to: VDRHSYTGCATR*SQDLFLRETRY
Trigger: GTAACGAGTCTCACGCAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGTGACGATCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000448249.7
ENST00000469582.6
CDS GCA 72 bp TCCTCGCTTGTGAGATTTCGTCACAGTTACACTGGGTaGGCCACAAGGTGCTCTCAAGACCTTTTTCTGCGT +
Preference number: 6 (lower is better)
Translates to: SSLVRFRHSYTG*ATRCSQDLFLR
Trigger: ACGCAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGTGACGAAATCTCACAAGCGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000372791.7
ENST00000372814.7
ENST00000393533.6
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000446274.5
ENST00000470061.5
ENST00000497812.6
ENST00000546203.5
ENST00000604420.5
CDS GCA 72 bp TCTCAACGTCACAGTTACACTGGGTGCGCCACAAGGTaGTCTCAAGACCTTTTTCTGCGTGAGACTCGTTAC +
Preference number: 6 (lower is better)
Translates to: SQRHSYTGCATR*SQDLFLRETRY
Trigger: GTAACGAGTCTCACGCAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGTGACGTTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393527.7
CDS CCA 72 bp TTGAAGAGCGGTCCTTCATGGTTGGCTTCTGGCAGGTaGGGGAGGACAACACAAAAATGGTTGATCGTCACA +
Preference number: 6 (lower is better)
Translates to: LKSGPSWLASGR*GRTTQKWLIVT
Trigger: TGTGACGATCAACCATTTTTGTGTTGTCCTCCCCCACCTGCCAGAAGCCAACCATGAAGGACCGCTCTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000448249.7
ENST00000469582.6
CDS CCA 72 bp TCTTCCTTCCGTTCCTCCAGGAACCTTTTGGCCATCTaGCGCTCACCTTTTTGCATCTTGACCTCAGACTTC +
Preference number: 6 (lower is better)
Translates to: SSFRSSRNLLAI*RSPFCILTSDF
Trigger: GAAGTCTGAGGTCAAGATGCAAAAAGGTGAGCGCCAGATGGCCAAAAGGTTCCTGGAGGAACGGAAGGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000446274.5
ENST00000546203.5
ENST00000604420.5
CDS CAA 72 bp ATCTCCTCTAAACCTGCTGGAATGCACAGCTCCTCCTaGGATTTAGTGAAGCACAGCGGAAAGCAGGCGGAT +
Preference number: 6 (lower is better)
Translates to: ISSKPAGMHSSS*DLVKHSGKQAD
Trigger: ATCCGCCTGCTTTCCGCTGTGCTTCACTAAATCCAAGGAGGAGCTGTGCATTCCAGCAGGTTTAGAGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393527.7
CDS TCA 72 bp GTTAGAGAACAGAGTGAAGGGTGGGAACGCAGAGACTaGCCGTGGGCTTTGTTAAGTGTGGATAGCATCACA +
Preference number: 6 (lower is better)
Translates to: VREQSEGWERRD*PWALLSVDSIT
Trigger: TGTGATGCTATCCACACTTAACAAAGCCCACGGTCAGTCTCTGCGTTCCCACCCTTCACTCTGTTCTCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488909.1
CDS GCA 72 bp TCAAATGTGCTCAGCTTCTGCAGGAGAAGTTCCTTCTaGCTTGTCAGGGTGTTGATGTCCGTGCAGGTCATT +
Preference number: 6 (lower is better)
Translates to: SNVLSFCRRSSF*LVRVLMSVQVI
Trigger: AATGACCTGCACGGACATCAACACCCTGACAAGGCAGAAGGAACTTCTCCTGCAGAAGCTGAGCACATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS GCA 72 bp AGATTTCGTCACAGTTACACTGGGTGCGCCACAAGGTaGTCTCAAGACCTTTTTCTGCGTGAGACTCGTTAC +
Preference number: 6 (lower is better)
Translates to: RFRHSYTGCATR*SQDLFLRETRY
Trigger: GTAACGAGTCTCACGCAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGTGACGAAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000372791.7
ENST00000372814.7
ENST00000393533.6
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000446274.5
ENST00000470061.5
ENST00000497812.6
ENST00000546203.5
ENST00000604420.5
CDS CCA 72 bp CGGTCTTCCCGCATCTTCTCCTCCAGGGTTTGTTGTTaGTTTACAAGATCTGTTACCCGGTCATTCAGGACA +
Preference number: 6 (lower is better)
Translates to: RSSRIFSSRVCC*FTRSVTRSFRT
Trigger: TGTCCTGAATGACCGGGTAACAGATCTTGTAAACCAACAACAAACCCTGGAGGAGAAGATGCGGGAAGACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS CAA 72 bp ATCCCGGTCTTCCCGCATCTTCTCCTCCAGGGTTTGTaGTTGGTTTACAAGATCTGTTACCCGGTCATTCAG +
Preference number: 6 (lower is better)
Translates to: IPVFPHLLLQGL*LVYKICYPVIQ
Trigger: CTGAATGACCGGGTAACAGATCTTGTAAACCAACAACAAACCCTGGAGGAGAAGATGCGGGAAGACCGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS CAA 90 bp CACCAGGCTATCCCGGTCTTCCCGCATCTTCTCCTCCAGGGTTTGTaGTTGGTTTACAAGATCTGTTACCCGGTCATTCAGGACAATAAT +
Preference number: 6 (lower is better)
Translates to: HQAIPVFPHLLLQGL*LVYKICYPVIQDNN
Trigger: ATTATTGTCCTGAATGACCGGGTAACAGATCTTGTAAACCAACAACAAACCCTGGAGGAGAAGATGCGGGAAGACCGGGATAGCCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS TCA 72 bp GCATCACTGAGACCAGCTTTTCTGAAGATGGTGGCGTaGTCTCCAGGCAATGAGGTGGATTCTTGGTTTTCA +
Preference number: 6 (lower is better)
Translates to: ASLRPAFLKMVA*SPGNEVDSWFS
Trigger: TGAAAACCAAGAATCCACCTCATTGCCTGGAGATCACGCCACCATCTTCAGAAAAGCTGGTCTCAGTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372791.7
ENST00000393527.7
ENST00000444119.6
ENST00000446274.5
ENST00000546203.5
CDS TCA 72 bp CAAAGGGACTTCAGCTACACCACTCAACATCTTGTGTaGCCAGCCATAGGGCAAATATGGCCATCCCGATAT +
Preference number: 6 (lower is better)
Translates to: QRDFSYTTQHLV*PAIGQIWPSRY
Trigger: ATATCGGGATGGCCATATTTGCCCTATGGCTGGTCACACAAGATGTTGAGTGGTGTAGCTGAAGTCCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488909.1
CDS TCA 72 bp AAGAAACTGAGCCTCAGAGAGGGGAATTCATTGGCCTaGAGTCAGCACAGCTGGCAAGTCTGTAACCAAAAC +
Preference number: 6 (lower is better)
Translates to: KKLSLREGNSLA*SQHSWQVCNQN
Trigger: GTTTTGGTTACAGACTTGCCAGCTGTGCTGACTTCAGGCCAATGAATTCCCCTCTCTGAGGCTCAGTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488909.1
CDS GCA 72 bp AGAAATCTGCAGATCAGCAAGGCGACCAAAGAACTGTaGAGCTGGAGCAACTGGTTAGAGAACAGAGTGAAG +
Preference number: 6 (lower is better)
Translates to: RNLQISKATKEL*SWSNWLENRVK
Trigger: CTTCACTCTGTTCTCTAACCAGTTGCTCCAGCTGCACAGTTCTTTGGTCGCCTTGCTGATCTGCAGATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488909.1
CDS CCA 72 bp CAACTTGGTTGTAGCGGCTCCTCCAGGATTCCAGAGTaGATAAAGCTTCAGCGACATAAAGATCCTTGTCAG +
Preference number: 6 (lower is better)
Translates to: QLGCSGSSRIPE*IKLQRHKDPCQ
Trigger: CTGACAAGGATCTTTATGTCGCTGAAGCTTTATCCACTCTGGAATCCTGGAGGAGCCGCTACAACCAAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS CCA 72 bp TCATTCCTCGCTTGTGAGATTTCGTCACAGTTACACTaGGTGCGCCACAAGGTGCTCTCAAGACCTTTTTCT +
Preference number: 6 (lower is better)
Translates to: SFLACEISSQLH*VRHKVLSRPFS
Trigger: AGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGTGACGAAATCTCACAAGCGAGGAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000372791.7
ENST00000372814.7
ENST00000393533.6
ENST00000421776.6
ENST00000432065.6
ENST00000434106.7
ENST00000446274.5
ENST00000470061.5
ENST00000497812.6
ENST00000546203.5
ENST00000604420.5
CDS CCA 72 bp TCCTTCTACACAGTGATCTCAACGTCACAGTTACACTaGGTGCGCCACAAGGTGCTCTCAAGACCTTTTTCT +
Preference number: 6 (lower is better)
Translates to: SFYTVISTSQLH*VRHKVLSRPFS
Trigger: AGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGTGACGTTGAGATCACTGTGTAGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393527.7
CDS CAA 90 bp CAGGCTATCCCGGTCTTCCCGCATCTTCTCCTCCAGGGTTTGTTGTaGGTTTACAAGATCTGTTACCCGGTCATTCAGGACAATAATTTC +
Preference number: 6 (lower is better)
Translates to: QAIPVFPHLLLQGLL*VYKICYPVIQDNNF
Trigger: GAAATTATTGTCCTGAATGACCGGGTAACAGATCTTGTAAACCAACAACAAACCCTGGAGGAGAAGATGCGGGAAGACCGGGATAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS GCA 72 bp AACACAAAAATGGTTGATCGTCACAGTTACACTGGGTaGGCCACAAGGTGCTCTCAAGACCTTTTTCTGCGT +
Preference number: 6 (lower is better)
Translates to: NTKMVDRHSYTG*ATRCSQDLFLR
Trigger: ACGCAGAAAAAGGTCTTGAGAGCACCTTGTGGCGCACCCAGTGTAACTGTGACGATCAACCATTTTTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351030.7
ENST00000448249.7
ENST00000469582.6
CDS GCA 72 bp AATATGGCCATCCCGATATACACACACTGTCCTCAGTaGACTTCCAGGATGCCTTCCAATTTAAGGAGCTCT +
Preference number: 6 (lower is better)
Translates to: NMAIPIYTHCPQ*TSRMPSNLRSS
Trigger: AGAGCTCCTTAAATTGGAAGGCATCCTGGAAGTGCACTGAGGACAGTGTGTGTATATCGGGATGGCCATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488909.1
CDS CAA 72 bp AATTTCCAGCTCAAGGTCTCCCTTTTCTTTTACAACTaGGTTGTAGCGGCTCCTCCAGGATTCCAGAGTGGA +
Preference number: 6 (lower is better)
Translates to: NFQLKVSLFFYN*VVAAPPGFQSG
Trigger: TCCACTCTGGAATCCTGGAGGAGCCGCTACAACCAAGTTGTAAAAGAAAAGGGAGACCTTGAGCTGGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000351030.7
ENST00000372791.7
ENST00000372807.9
ENST00000372814.7
ENST00000393527.7
ENST00000393533.6
ENST00000434106.7
ENST00000444119.6
ENST00000448249.7
ENST00000546203.5
ENST00000604420.5
CDS CCA 72 bp ATCACATGGAACACAGCAACTTGCAGCTCAGAAAAATaGTACCATTATTATCCCCACTTCAGAAATGAAGAA +
Preference number: 6 (lower is better)
Translates to: ITWNTATCSSEK*YHYYPHFRNEE
Trigger: TTCTTCATTTCTGAAGTGGGGATAATAATGGTACCATTTTTCTGAGCTGCAAGTTGCTGTGTTCCATGTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488909.1