Pregenerated sensors for ODAPH (Homo sapiens)
Ensembl gene IDs: ENSG00000174792Ensembl transcript IDs: ENST00000311623.9, ENST00000435974.2, ENST00000511093.5, ENST00000514064.1, ENST00000616557.1
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTTGTGATGGGCTGGGCCCTTGTGACCGGACTCCTCGGGGCAGGTaGAGGGGTGAGTGTAAAGATCTGGCAGTCGGTAGCGTCCGCATT | + |
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Preference number: 1 (lower is better) Translates to: LCDGLGPCDRTPRGR*RGECKDLAVGSVRI Trigger: AATGCGGACGCTACCGACTGCCAGATCTTTACACTCACCCCTCCACCTGCCCCGAGGAGTCCGGTCACAAGGGCCCAGCCCATCACAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511093.5 |
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| 3UTR GCA 90 bp | CAGCAGCAACAGCAACTTTTGCATGTAGATCTTGGGAGGAAAAAGTaGAAACCACTGACCACATATGCAGAACTAAAGTTCTTATGTTAC | + |
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Preference number: 1 (lower is better) Translates to: QQQQQLLHVDLGRKK*KPLTTYAELKFLCY Trigger: GTAACATAAGAACTTTAGTTCTGCATATGTGGTCAGTGGTTTGCACTTTTTCCTCCCAAGATCTACATGCAAAAGTTGCTGTTGCTGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| 3UTR TCA 90 bp | ATTTGTTTCTCATATTGCACCCTGAGAATACAAGGTTCCAAGAGTTaGGTGAACTTATCTCTGTGGAGTTCTAGAGGTACCAGAATATTC | + |
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Preference number: 1 (lower is better) Translates to: ICFSYCTLRIQGSKS*VNLSLWSSRGTRIF Trigger: GAATATTCTGGTACCTCTAGAACTCCACAGAGATAAGTTCACTCAACTCTTGGAACCTTGTATTCTCAGGGTGCAATATGAGAAACAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| 3UTR GCA 90 bp | AGGAAGATGTGTTTTACAGAGTGGCCAAAACAAATAACCAATCAATaGAATCTGTGGGATTTGTTTCTCATATTGCACCCTGAGAATACA | + |
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Preference number: 1 (lower is better) Translates to: RKMCFTEWPKQITNQ*NLWDLFLILHPENT Trigger: TGTATTCTCAGGGTGCAATATGAGAAACAAATCCCACAGATTGCATTGATTGGTTATTTGTTTTGGCCACTCTGTAAAACACATCTTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| 3UTR-3UTR CCA 90 bp | GTGAGTGTAAAGATCTGGCAGTCGGTAGCGTCCGCATTATTTTGTGAATCTCCAGTAATCCCAGAACTTTaGGAGGCCGAGGCTGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: VSVKIWQSVASALFCESPVIPEL*EAEAGR Trigger: TCTGCCAGCCTCGGCCTCCCAAAGTTCTGGGATTAC...TGGAGATTCACAAAATAATGCGGACGCTACCGACTGCCAGATCTTTACACTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511093.5 |
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| 3UTR-3UTR GCA 90 bp | TGTGGAGTTCTAGAGGTACCAGAATATTCTTGTAGCAGTTTAATCAGGCATTTTCTGAGGCAAGAGAATTaGTTGAACCCGGGAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: CGVLEVPEYSCSSLIRHFLRQEN*LNPGGR Trigger: TCTGCCTCCCGGGTTCAAGCAATTCTCTTGCCTCAG...AAAATGCCTGATTAAACTGCTACAAGAATATTCTGGTACCTCTAGAACTCCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| 3UTR-3UTR GCA 90 bp | TCAATAACCTATGATCCAATATCTTCACTGCTGACAAAGAGAACAGTTTCTAGTTTGTCCTTTAAGATGTaGGGATTTTGGCCGGGCGCT | + |
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Preference number: 2 (lower is better) Translates to: SITYDPISSLLTKRTVSSLSFKM*GFWPGA Trigger: AGCGCCCGGCCAAAATCCGCACATCTTAAAGGACAA...ACTAGAAACTGTTCTCTTTGTCAGCAGTGAAGATATTGGATCATAGGTTATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511093.5 |
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| 3UTR CAA 90 bp | ACAGAGTGGCCAAAACAAATAACCAATCAATGCAATCTGTGGGATTaGTTTCTCATATTGCACCCTGAGAATACAAGGTTCCAAGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: TEWPKQITNQCNLWD*FLILHPENTRFQEL Trigger: CAACTCTTGGAACCTTGTATTCTCAGGGTGCAATATGAGAAACAAATCCCACAGATTGCATTGATTGGTTATTTGTTTTGGCCACTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| 3UTR-3UTR TCA 90 bp | ACCAATCAATGCAATCTGTGGGATTTGTTTCTCATATTGCACCCTGAGAATACACAATATCTTCACTGCTaGCAAAGAGAACAGTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: TNQCNLWDLFLILHPENTQYLHC*QREQFL Trigger: TAGAAACTGTTCTCTTTGTCAGCAGTGAAGATATTG...TGTATTCTCAGGGTGCAATATGAGAAACAAATCCCACAGATTGCATTGATTGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| 3UTR CAA 90 bp | AAACAAATAACCAATCAATGCAATCTGTGGGATTTGTTTCTCATATaGCACCCTGAGAATACAAGGTTCCAAGAGTTGAGTGAACTTATC | + |
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Preference number: 2 (lower is better) Translates to: KQITNQCNLWDLFLI*HPENTRFQELSELI Trigger: GATAAGTTCACTCAACTCTTGGAACCTTGTATTCTCAGGGTGCAATATGAGAAACAAATCCCACAGATTGCATTGATTGGTTATTTGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| 3UTR-3UTR TCA 90 bp | GACCATAAGAGGTTGAGGATAAAAATAACGTGGTTATTGTCCAATTTTGCAACCCAATATCTTCACTGCTaGCAAAGAGAACAGTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: DHKRLRIKITWLLSNFATQYLHC*QREQFL Trigger: TAGAAACTGTTCTCTTTGTCAGCAGTGAAGATATTG...GGTTGCAAAATTGGACAATAACCACGTTATTTTTATCCTCAACCTCTTATGGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000311623.9 ENST00000616557.1 |
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| 3UTR-3UTR TCA 90 bp | TACAGAGTGGCCAAAACAAATAACCAATCAATGCAATCTGTGGGATTTGTTTCTACCATCAATAACCTATaGTCCAATATCTTCACTGCT | + |
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Preference number: 2 (lower is better) Translates to: YRVAKTNNQSMQSVGFVSTINNL*SNIFTA Trigger: AGCAGTGAAGATATTGGATCATAGGTTATTGATGGT...AGAAACAAATCCCACAGATTGCATTGATTGGTTATTTGTTTTGGCCACTCTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| 3UTR-3UTR GCA 90 bp | TTTTACAGAGTGGCCAAAACAAATAACCAATCAATGCAATCTGTGGGATTTGTTTTTGTCAATGCACCTTaGTCTGTATGTTTTCCAATG | + |
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Preference number: 2 (lower is better) Translates to: FYRVAKTNNQSMQSVGFVFVNAP*SVCFPM Trigger: CATTGGAAAACATACAGAGCAAGGTGCATTGACAAA...AACAAATCCCACAGATTGCATTGATTGGTTATTTGTTTTGGCCACTCTGTAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| 3UTR-3UTR GCA 90 bp | TGTGGAGTTCTAGAGGTACCAGAATATTCTTGTAGCAGTTTAATCAGGCATTTTAGTTTACTTTGTCAATaGACCTTGCTCTGTATGTTT | + |
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Preference number: 2 (lower is better) Translates to: CGVLEVPEYSCSSLIRHFSLLCQ*TLLCMF Trigger: AAACATACAGAGCAAGGTGCATTGACAAAGTAAACT...AAAATGCCTGATTAAACTGCTACAAGAATATTCTGGTACCTCTAGAACTCCACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| 3UTR CCA 72 bp | GGGCTGGGCCCTTGTGACCGGACTCCTCGGGGCAGGTaGAGGGGTGAGTGTAAAGATCTGGCAGTCGGTAGC | + |
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Preference number: 3 (lower is better) Translates to: GLGPCDRTPRGR*RGECKDLAVGS Trigger: GCTACCGACTGCCAGATCTTTACACTCACCCCTCCACCTGCCCCGAGGAGTCCGGTCACAAGGGCCCAGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511093.5 |
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| 3UTR CCA 72 bp | CTTCTGGGGAAATACCTGGGTGTCTTTGTGATGGGCTaGGCCCTTGTGACCGGACTCCTCGGGGCAGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: LLGKYLGVFVMG*ALVTGLLGAGG Trigger: TCCACCTGCCCCGAGGAGTCCGGTCACAAGGGCCCAGCCCATCACAAAGACACCCAGGTATTTCCCCAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511093.5 |
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| 3UTR TCA 72 bp | AAAGATCTGGCAGTCGGTAGCGTCCGCATTATTTTGTaGATCTCCAGGAGGCGTAAATACCTCTTCTTGTCC | + |
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Preference number: 3 (lower is better) Translates to: KDLAVGSVRIIL*ISRRRKYLFLS Trigger: GGACAAGAAGAGGTATTTACGCCTCCTGGAGATTCACAAAATAATGCGGACGCTACCGACTGCCAGATCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511093.5 |
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| 3UTR TCA 72 bp | TCATATTGCACCCTGAGAATACAAGGTTCCAAGAGTTaGGTGAACTTATCTCTGTGGAGTTCTAGAGGTACC | + |
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Preference number: 3 (lower is better) Translates to: SYCTLRIQGSKS*VNLSLWSSRGT Trigger: GGTACCTCTAGAACTCCACAGAGATAAGTTCACTCAACTCTTGGAACCTTGTATTCTCAGGGTGCAATATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| 3UTR-3UTR CAA 90 bp | CAATGCACCTTGCTCTGTATGTTTTCCAATGAGTATAAAAACGGTGTCATCAGTTGTGACCATAAGAGGTaGAGGATAAAAATAACGTGG | + |
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Preference number: 3 (lower is better) Translates to: QCTLLCMFSNEYKNGVISCDHKR*RIKITW Trigger: CCACGTTATTTTTATCCTCAACCTCTTATGGTCACA...ACTGATGACACCGTTTTTATACTCATTGGAAAACATACAGAGCAAGGTGCATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| 3UTR-3UTR CAA 90 bp | ACCAATCAATGCAATCTGTGGGATTTGTTTCTCATATTGCACCCTGAGAATACACTTTGTCAATGCACCTaGCTCTGTATGTTTTCCAAT | + |
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Preference number: 3 (lower is better) Translates to: TNQCNLWDLFLILHPENTLCQCT*LCMFSN Trigger: ATTGGAAAACATACAGAGCAAGGTGCATTGACAAAG...TGTATTCTCAGGGTGCAATATGAGAAACAAATCCCACAGATTGCATTGATTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| 3UTR-3UTR CAA 90 bp | TCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCCATTTAAAGATTTGTGACCATAAGAGGTaGAGGATAAAAATAACGTGG | + |
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Preference number: 3 (lower is better) Translates to: SLSILVWIGITRATHLKICDHKR*RIKITW Trigger: CCACGTTATTTTTATCCTCAACCTCTTATGGTCACA...AATCTTTAAATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000311623.9 ENST00000616557.1 |
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| 3UTR TCA 72 bp | TGGTTATTGTCCAATTTTGCAACCATCAATAACCTATaGTCCAATATCTTCACTGCTGACAAAGAGAACAGT | + |
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Preference number: 3 (lower is better) Translates to: WLLSNFATINNL*SNIFTADKENS Trigger: ACTGTTCTCTTTGTCAGCAGTGAAGATATTGGATCATAGGTTATTGATGGTTGCAAAATTGGACAATAACCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311623.9 ENST00000616557.1 |
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| 3UTR TCA 72 bp | TCTTCACTGCTGACAAAGAGAACAGTTTCTAGTCAGTaGTGTTTAGGATACTTAATCTTCAAATCCAATAGT | + |
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Preference number: 3 (lower is better) Translates to: SSLLTKRTVSSQ*CLGYLIFKSNS Trigger: ACTATTGGATTTGAAGATTAAGTATCCTAAACATCACTGACTAGAAACTGTTCTCTTTGTCAGCAGTGAAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000311623.9 ENST00000511093.5 ENST00000616557.1 |
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| CDS-3UTR TCA 90 bp | CCTGGGTGTCTTTGTGATGGGCTGGGCCCTTGTGACCGGACTCCTCGGGGCAGGTGGGCTGGGCCCTTGTaGCCGGACTCCTCGGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PGCLCDGLGPCDRTPRGRWAGPL*PDSSGQ Trigger: CTGCCCCGAGGAGTCCGGTCACAAGGGCCCAGCCCA...CCTGCCCCGAGGAGTCCGGTCACAAGGGCCCAGCCCATCACAAAGACACCCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511093.5 |
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| CDS-3UTR CCA 90 bp | GATGGGCTGGGCCCTTGTGACCGGACTCCTCGGGGCAGGTGGAGGGGTGAGTGTAGTGTCTGCGAGCCATaGCTTCTACTGAGCAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: DGLGPCDRTPRGRWRGECSVCEP*LLLSSH Trigger: GTGACTGCTCAGTAGAAGCCATGGCTCGCAGACACT...ACACTCACCCCTCCACCTGCCCCGAGGAGTCCGGTCACAAGGGCCCAGCCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511093.5 |
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| CDS-3UTR CCA 90 bp | AAATACCTCTTCTTGTCCTTTAAGATGTGCGGATTTTGGCCGGGCGCTGTGGCTACTCCTCGGGGCAGGTaGAGGGGTGAGTGTAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: KYLFLSFKMCGFWPGAVATPRGR*RGECKD Trigger: ATCTTTACACTCACCCCTCCACCTGCCCCGAGGAGT...AGCCACAGCGCCCGGCCAAAATCCGCACATCTTAAAGGACAAGAAGAGGTATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000511093.5 |
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| CDS-3UTR TCA 90 bp | GAGCTTCCTCTCTGGAGTCTTCTTCTGGGGAAATACCTGGGTGTCTTTGTGATGAGCCATGGCTTCTACTaGGCAGTCACTGCGTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: ELPLWSLLLGKYLGVFVMSHGFY*AVTALN Trigger: GTTCAACGCAGTGACTGCTCAGTAGAAGCCATGGCT...CATCACAAAGACACCCAGGTATTTCCCCAGAAGAAGACTCCAGAGAGGAAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511093.5 |
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| CDS-3UTR CCA 90 bp | GTAAAGATCTGGCAGTCGGTAGCGTCCGCATTATTTTGTGAATCTCCAGGAGGCGTGAGTGTAAAGATCTaGCAGTCGGTAGCGTCCGCA | + |
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Preference number: 4 (lower is better) Translates to: VKIWQSVASALFCESPGGVSVKI*QSVASA Trigger: TGCGGACGCTACCGACTGCCAGATCTTTACACTCAC...GCCTCCTGGAGATTCACAAAATAATGCGGACGCTACCGACTGCCAGATCTTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511093.5 |
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| CDS-3UTR TCA 90 bp | TCAATAACCTATGATCCAATATCTTCACTGCTGACAAAGAGAACAGTTTCTAGTTGGGCTGGGCCCTTGTaGCCGGACTCCTCGGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SITYDPISSLLTKRTVSSWAGPL*PDSSGQ Trigger: CTGCCCCGAGGAGTCCGGTCACAAGGGCCCAGCCCA...ACTAGAAACTGTTCTCTTTGTCAGCAGTGAAGATATTGGATCATAGGTTATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000311623.9 ENST00000511093.5 ENST00000616557.1 |
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| CDS-3UTR TCA 90 bp | GAGGAGGAGATGGATTCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCAGGCAGAGGTTGCAGTaGGCCGAGACAGCACCACTA | + |
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Preference number: 4 (lower is better) Translates to: EEEMDSLSILVWIGITRARQRLQ*AETAPL Trigger: TAGTGGTGCTGTCTCGGCTCACTGCAACCTCTGCCT...GGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCATCTCCTCCTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR GCA 90 bp | GAGCTTCCTCTCTGGAGTCTTCTTCTGGGGAAATACCTGGGTGTCTTTGTGATGTTGTCCTTTAAGATGTaGGGATTTTGGCCGGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: ELPLWSLLLGKYLGVFVMLSFKM*GFWPGA Trigger: AGCGCCCGGCCAAAATCCGCACATCTTAAAGGACAA...CATCACAAAGACACCCAGGTATTTCCCCAGAAGAAGACTCCAGAGAGGAAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511093.5 |
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| CDS-3UTR CCA 90 bp | AGTGTAAAGATCTGGCAGTCGGTAGCGTCCGCATTATTTTGTGAATCTCCAGGAGTAATCCCAGAACTTTaGGAGGCCGAGGCTGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SVKIWQSVASALFCESPGVIPEL*EAEAGR Trigger: TCTGCCAGCCTCGGCCTCCCAAAGTTCTGGGATTAC...TCCTGGAGATTCACAAAATAATGCGGACGCTACCGACTGCCAGATCTTTACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511093.5 |
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| CDS-3UTR CCA 90 bp | GGCGTAAATACCTCTTCTTGTCCTTTAAGATGTGCGGATTTTGGCCGGGCGCTGTCTGGAGTCTTCTTCTaGGGAAATACCTGGGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GVNTSSCPLRCADFGRALSGVFF*GNTWVS Trigger: AGACACCCAGGTATTTCCCCAGAAGAAGACTCCAGA...CAGCGCCCGGCCAAAATCCGCACATCTTAAAGGACAAGAAGAGGTATTTACGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511093.5 |
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| CDS-3UTR GCA 90 bp | AGTGTAAAGATCTGGCAGTCGGTAGCGTCCGCATTATTTTGTGAATCTCCAGGACCCCGTCTCTACTTCTaGCACAGTTACCACCAACCA | + |
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Preference number: 4 (lower is better) Translates to: SVKIWQSVASALFCESPGPRLYF*HSYHQP Trigger: TGGTTGGTGGTAACTGTGGCAGAAGTAGAGACGGGG...TCCTGGAGATTCACAAAATAATGCGGACGCTACCGACTGCCAGATCTTTACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511093.5 |
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| CDS-3UTR TCA 90 bp | GTAAAGATCTGGCAGTCGGTAGCGTCCGCATTATTTTGTGAATCTCCAGGAGGCGTCCGCATTATTTTGTaGATCTCCAGGAGGCGTAAA | + |
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Preference number: 4 (lower is better) Translates to: VKIWQSVASALFCESPGGVRIIL*ISRRRK Trigger: TTTACGCCTCCTGGAGATTCACAAAATAATGCGGAC...GCCTCCTGGAGATTCACAAAATAATGCGGACGCTACCGACTGCCAGATCTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511093.5 |
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| CDS-3UTR CCA 90 bp | GAGGAGATGGATTCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCAGTGTCTGCGAGCCATaGCTTCTACTGAGCAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: EEMDSLSILVWIGITRATSVCEP*LLLSSH Trigger: GTGACTGCTCAGTAGAAGCCATGGCTCGCAGACACT...GGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCATCTCCTC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR TCA 90 bp | GAGGAGGAGATGGATTCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACGGTGGTTACACCTTaGAGGGACGAAAGGTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: EEEMDSLSILVWIGITRATVVTP*RDERSV Trigger: AACAGACCTTTCGTCCCTTCAAGGTGTAACCACCGT...GGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCATCTCCTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311623.9 |
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| CDS-3UTR TCA 90 bp | GAGTCTTCTTCTGGGGAAATACCTGGGTGTCTTTGTGATGGGCTGGGCCCTTGTCAATATCTTCACTGCTaGCAAAGAGAACAGTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: ESSSGEIPGCLCDGLGPCQYLHC*QREQFL Trigger: TAGAAACTGTTCTCTTTGTCAGCAGTGAAGATATTG...ACAAGGGCCCAGCCCATCACAAAGACACCCAGGTATTTCCCCAGAAGAAGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511093.5 |
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| CDS-3UTR TCA 90 bp | GAGTCTTCTTCTGGGGAAATACCTGGGTGTCTTTGTGATGGGCTGGGCCCTTGTACCATCAATAACCTATaGTCCAATATCTTCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: ESSSGEIPGCLCDGLGPCTINNL*SNIFTA Trigger: AGCAGTGAAGATATTGGATCATAGGTTATTGATGGT...ACAAGGGCCCAGCCCATCACAAAGACACCCAGGTATTTCCCCAGAAGAAGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511093.5 |
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| CDS-3UTR GCA 90 bp | GAGATGGATTCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCCATCTGAGGCAAGAGAATTaGTTGAACCCGGGAGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: EMDSLSILVWIGITRATHLRQEN*LNPGGR Trigger: TCTGCCTCCCGGGTTCAAGCAATTCTCTTGCCTCAG...ATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR CCA 90 bp | GAGATGGATTCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCCATGTGAGTGTAAAGATCTaGCAGTCGGTAGCGTCCGCA | + |
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Preference number: 4 (lower is better) Translates to: EMDSLSILVWIGITRATHVSVKI*QSVASA Trigger: TGCGGACGCTACCGACTGCCAGATCTTTACACTCAC...ATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311623.9 ENST00000616557.1 |
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| CDS-3UTR CCA 90 bp | ACCAATCAATGCAATCTGTGGGATTTGTTTCTCATATTGCACCCTGAGAATACAGTCTTTGTGATGGGCTaGGCCCTTGTGACCGGACTC | + |
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Preference number: 4 (lower is better) Translates to: TNQCNLWDLFLILHPENTVFVMG*ALVTGL Trigger: GAGTCCGGTCACAAGGGCCCAGCCCATCACAAAGAC...TGTATTCTCAGGGTGCAATATGAGAAACAAATCCCACAGATTGCATTGATTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR CCA 90 bp | AGTGTAAAGATCTGGCAGTCGGTAGCGTCCGCATTATTTTGTGAATCTCCAGGAGATGAGCTTCCTCTCTaGAGTCTTCTTCTGGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SVKIWQSVASALFCESPGDELPL*SLLLGK Trigger: TTTCCCCAGAAGAAGACTCCAGAGAGGAAGCTCATC...TCCTGGAGATTCACAAAATAATGCGGACGCTACCGACTGCCAGATCTTTACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511093.5 |
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| CDS-3UTR TCA 90 bp | ATGGATTCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCCATTTAGGCAAGAGAATTGCTTaGACCCGGGAGGCAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: MDSLSILVWIGITRATHLGKRIA*TREAEV Trigger: AACCTCTGCCTCCCGGGTTCAAGCAATTCTCTTGCC...TAAATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR CCA 90 bp | ATGGATTCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCCATTTAACTCCTCGGGGCAGGTaGAGGGGTGAGTGTAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: MDSLSILVWIGITRATHLTPRGR*RGECKD Trigger: ATCTTTACACTCACCCCTCCACCTGCCCCGAGGAGT...TAAATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000311623.9 ENST00000616557.1 |
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| CDS-3UTR CCA 90 bp | GAGGAGATGGATTCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCGATGAGCTTCCTCTCTaGAGTCTTCTTCTGGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: EEMDSLSILVWIGITRATDELPL*SLLLGK Trigger: TTTCCCCAGAAGAAGACTCCAGAGAGGAAGCTCATC...GGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCATCTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311623.9 ENST00000616557.1 |
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| CDS-3UTR TCA 90 bp | ATGGATTCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCCATTTAAGCCATGGCTTCTACTaGGCAGTCACTGCGTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: MDSLSILVWIGITRATHLSHGFY*AVTALN Trigger: GTTCAACGCAGTGACTGCTCAGTAGAAGCCATGGCT...TAAATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR CCA 90 bp | ATGGATTCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCCATTTAGTGAGTGTAAAGATCTaGCAGTCGGTAGCGTCCGCA | + |
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Preference number: 4 (lower is better) Translates to: MDSLSILVWIGITRATHLVSVKI*QSVASA Trigger: TGCGGACGCTACCGACTGCCAGATCTTTACACTCAC...TAAATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311623.9 ENST00000616557.1 |
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| CDS-3UTR CCA 90 bp | TCAATAACCTATGATCCAATATCTTCACTGCTGACAAAGAGAACAGTTTCTAGTGTCTTTGTGATGGGCTaGGCCCTTGTGACCGGACTC | + |
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Preference number: 4 (lower is better) Translates to: SITYDPISSLLTKRTVSSVFVMG*ALVTGL Trigger: GAGTCCGGTCACAAGGGCCCAGCCCATCACAAAGAC...ACTAGAAACTGTTCTCTTTGTCAGCAGTGAAGATATTGGATCATAGGTTATTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000311623.9 ENST00000511093.5 ENST00000616557.1 |
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| CDS-3UTR CCA 90 bp | GAGGAGATGGATTCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCGTGTGGCCAATAAAATaGCTGGAATGGAAAACGGTG | + |
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Preference number: 4 (lower is better) Translates to: EEMDSLSILVWIGITRATVWPIK*LEWKTV Trigger: CACCGTTTTCCATTCCAGCCATTTTATTGGCCACAC...GGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCATCTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311623.9 |
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| CDS-3UTR TCA 90 bp | GAGATGGATTCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCCATGTCCGCATTATTTTGTaGATCTCCAGGAGGCGTAAA | + |
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Preference number: 4 (lower is better) Translates to: EMDSLSILVWIGITRATHVRIIL*ISRRRK Trigger: TTTACGCCTCCTGGAGATTCACAAAATAATGCGGAC...ATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311623.9 ENST00000616557.1 |
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| CDS-3UTR TCA 90 bp | GAGATGGATTCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCCATCAAGGTTCCAAGAGTTaGGTGAACTTATCTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: EMDSLSILVWIGITRATHQGSKS*VNLSLW Trigger: CCACAGAGATAAGTTCACTCAACTCTTGGAACCTTG...ATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR GCA 90 bp | ATGGATTCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCCATTTACTCTTCTTGTCCTTCTaGCACAGTTACCACCAACCA | + |
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Preference number: 4 (lower is better) Translates to: MDSLSILVWIGITRATHLLFLSF*HSYHQP Trigger: TGGTTGGTGGTAACTGTGGCAGAAGGACAAGAAGAG...TAAATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311623.9 ENST00000616557.1 |
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| CDS-3UTR CCA 90 bp | GAGATGGATTCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCCATTTTGGAAACCTAAAATaGATTCTGGGCCTTCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: EMDSLSILVWIGITRATHFGNLK*ILGLRG Trigger: TCCACGAAGGCCCAGAATCCATTTTAGGTTTCCAAA...ATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311623.9 |
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| CDS-3UTR TCA 90 bp | ATGGATTCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCCATTTAGTCCGCATTATTTTGTaGATCTCCAGGAGGCGTAAA | + |
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Preference number: 4 (lower is better) Translates to: MDSLSILVWIGITRATHLVRIIL*ISRRRK Trigger: TTTACGCCTCCTGGAGATTCACAAAATAATGCGGAC...TAAATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311623.9 ENST00000616557.1 |
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| CDS-3UTR GCA 90 bp | TCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCCATTTAAAGATTCTCTTCTTGTCCTTCTaGCACAGTTACCACCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: SLSILVWIGITRATHLKILFLSF*HSYHQP Trigger: TGGTTGGTGGTAACTGTGGCAGAAGGACAAGAAGAG...AATCTTTAAATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311623.9 ENST00000616557.1 |
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| CDS-3UTR CCA 90 bp | GAGGAGGAGATGGATTCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCGACGAAAGGTCTGTTTaGAAACCTAAAATGGATTCT | + |
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Preference number: 4 (lower is better) Translates to: EEEMDSLSILVWIGITRADERSV*KPKMDS Trigger: AGAATCCATTTTAGGTTTCCAAACAGACCTTTCGTC...GGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCATCTCCTCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311623.9 |
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| CDS-3UTR CCA 90 bp | TCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCCATTTAAAGATTTGGAATGGAAAACGGTaGTTACACCTTGAAGGGACG | + |
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Preference number: 4 (lower is better) Translates to: SLSILVWIGITRATHLKIWNGKR*LHLEGT Trigger: CGTCCCTTCAAGGTGTAACCACCGTTTTCCATTCCA...AATCTTTAAATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311623.9 |
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| CDS-3UTR CCA 90 bp | AGAGTGGCCAAAACAAATAACCAATCAATGCAATCTGTGGGATTTGTTTCTCATGATGAGCTTCCTCTCTaGAGTCTTCTTCTGGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: RVAKTNNQSMQSVGFVSHDELPL*SLLLGK Trigger: TTTCCCCAGAAGAAGACTCCAGAGAGGAAGCTCATC...ATGAGAAACAAATCCCACAGATTGCATTGATTGGTTATTTGTTTTGGCCACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR CCA 90 bp | TGTGGAGTTCTAGAGGTACCAGAATATTCTTGTAGCAGTTTAATCAGGCATTTTTCTGGAGTCTTCTTCTaGGGAAATACCTGGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CGVLEVPEYSCSSLIRHFSGVFF*GNTWVS Trigger: AGACACCCAGGTATTTCCCCAGAAGAAGACTCCAGA...AAAATGCCTGATTAAACTGCTACAAGAATATTCTGGTACCTCTAGAACTCCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR TCA 90 bp | ACTTTTGCATGTAGATCTTGGGAGGAAAAAGTGCAAACCACTGACCACATATGCCAATATCTTCACTGCTaGCAAAGAGAACAGTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: TFACRSWEEKVQTTDHICQYLHC*QREQFL Trigger: TAGAAACTGTTCTCTTTGTCAGCAGTGAAGATATTG...GCATATGTGGTCAGTGGTTTGCACTTTTTCCTCCCAAGATCTACATGCAAAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR TCA 90 bp | GAGATGGATTCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCCATACCATCAATAACCTATaGTCCAATATCTTCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EMDSLSILVWIGITRATHTINNL*SNIFTA Trigger: AGCAGTGAAGATATTGGATCATAGGTTATTGATGGT...ATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCATCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311623.9 ENST00000616557.1 |
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| CDS-3UTR CCA 90 bp | ACCAATCAATGCAATCTGTGGGATTTGTTTCTCATATTGCACCCTGAGAATACAGTGAACTTATCTCTGTaGAGTTCTAGAGGTACCAGA | + |
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Preference number: 4 (lower is better) Translates to: TNQCNLWDLFLILHPENTVNLSL*SSRGTR Trigger: TCTGGTACCTCTAGAACTCCACAGAGATAAGTTCAC...TGTATTCTCAGGGTGCAATATGAGAAACAAATCCCACAGATTGCATTGATTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| 3UTR CAA 72 bp | ACCAATCAATGCAATCTGTGGGATTTGTTTCTCATATaGCACCCTGAGAATACAAGGTTCCAAGAGTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: TNQCNLWDLFLI*HPENTRFQELS Trigger: ACTCAACTCTTGGAACCTTGTATTCTCAGGGTGCAATATGAGAAACAAATCCCACAGATTGCATTGATTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR TCA 90 bp | GACCATAAGAGGTTGAGGATAAAAATAACGTGGTTATTGTCCAATTTTGCAACCGTTCCAAGAGTTGAGTaGACTTATCTCTGTGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: DHKRLRIKITWLLSNFATVPRVE*TYLCGV Trigger: AACTCCACAGAGATAAGTTCACTCAACTCTTGGAAC...GGTTGCAAAATTGGACAATAACCACGTTATTTTTATCCTCAACCTCTTATGGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR GCA 90 bp | GACCATAAGAGGTTGAGGATAAAAATAACGTGGTTATTGTCCAATTTTGCAACCCTTGGGAGGAAAAAGTaGAAACCACTGACCACATAT | + |
|
Preference number: 4 (lower is better) Translates to: DHKRLRIKITWLLSNFATLGRKK*KPLTTY Trigger: ATATGTGGTCAGTGGTTTGCACTTTTTCCTCCCAAG...GGTTGCAAAATTGGACAATAACCACGTTATTTTTATCCTCAACCTCTTATGGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR TCA 90 bp | ATGGATTCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCCATTTAACCATCAATAACCTATaGTCCAATATCTTCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MDSLSILVWIGITRATHLTINNL*SNIFTA Trigger: AGCAGTGAAGATATTGGATCATAGGTTATTGATGGT...TAAATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311623.9 ENST00000616557.1 |
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| CDS-3UTR TCA 90 bp | TCAATAACCTATGATCCAATATCTTCACTGCTGACAAAGAGAACAGTTTCTAGTTCTCATATTGCACCCTaGGAATACAAGGTTCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: SITYDPISSLLTKRTVSSSHIAP*EYKVPR Trigger: TCTTGGAACCTTGTATTCTCAGGGTGCAATATGAGA...ACTAGAAACTGTTCTCTTTGTCAGCAGTGAAGATATTGGATCATAGGTTATTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR CCA 90 bp | CGTGGTTATTGTCCAATTTTGCAACCATCAATAACCTATGATCCAATATCTTCAAGTAAGGTAACGGTGTaGCCAATAAAATGGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: RGYCPILQPSITYDPISSSKVTV*PIKWLE Trigger: TTCCAGCCATTTTATTGGCCACACCGTTACCTTACT...TGAAGATATTGGATCATAGGTTATTGATGGTTGCAAAATTGGACAATAACCACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311623.9 |
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| 3UTR CAA 72 bp | CCAAAACAAATAACCAATCAATGCAATCTGTGGGATTaGTTTCTCATATTGCACCCTGAGAATACAAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: PKQITNQCNLWD*FLILHPENTRF Trigger: GAACCTTGTATTCTCAGGGTGCAATATGAGAAACAAATCCCACAGATTGCATTGATTGGTTATTTGTTTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR GCA 90 bp | GACCATAAGAGGTTGAGGATAAAAATAACGTGGTTATTGTCCAATTTTGCAACCTTTGTCAATGCACCTTaGTCTGTATGTTTTCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: DHKRLRIKITWLLSNFATFVNAP*SVCFPM Trigger: CATTGGAAAACATACAGAGCAAGGTGCATTGACAAA...GGTTGCAAAATTGGACAATAACCACGTTATTTTTATCCTCAACCTCTTATGGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR GCA 90 bp | GTCAATGCACCTTGCTCTGTATGTTTTCCAATGAGTATAAAAACGGTGTCATCAAGTTTACTTTGTCAATaGACCTTGCTCTGTATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VNAPCSVCFPMSIKTVSSSLLCQ*TLLCMF Trigger: AAACATACAGAGCAAGGTGCATTGACAAAGTAAACT...TGATGACACCGTTTTTATACTCATTGGAAAACATACAGAGCAAGGTGCATTGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR GCA 90 bp | TCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCCATTTAAAGATTACCACTGACCACATATaGAGAACTAAAGTTCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: SLSILVWIGITRATHLKITTDHI*RTKVLM Trigger: CATAAGAACTTTAGTTCTGCATATGTGGTCAGTGGT...AATCTTTAAATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR CCA 90 bp | TCAATAACCTATGATCCAATATCTTCACTGCTGACAAAGAGAACAGTTTCTAGTATAAAATGGCTGGAATaGAAAACGGTGGTTACACCT | + |
|
Preference number: 4 (lower is better) Translates to: SITYDPISSLLTKRTVSSIKWLE*KTVVTP Trigger: AGGTGTAACCACCGTTTTCCATTCCAGCCATTTTAT...ACTAGAAACTGTTCTCTTTGTCAGCAGTGAAGATATTGGATCATAGGTTATTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311623.9 |
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| CDS-3UTR CCA 90 bp | CGTGGTTATTGTCCAATTTTGCAACCATCAATAACCTATGATCCAATATCTTCATACAGGCAAGATAAGTaGCATAAACAGGAAGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGYCPILQPSITYDPISSYRQDK*HKQEDV Trigger: CACATCTTCCTGTTTATGCCACTTATCTTGCCTGTA...TGAAGATATTGGATCATAGGTTATTGATGGTTGCAAAATTGGACAATAACCACG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR CCA 90 bp | CGTGGTTATTGTCCAATTTTGCAACCATCAATAACCTATGATCCAATATCTTCATTTGCATGTAGATCTTaGGAGGAAAAAGTGCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: RGYCPILQPSITYDPISSFACRS*EEKVQT Trigger: GGTTTGCACTTTTTCCTCCCAAGATCTACATGCAAA...TGAAGATATTGGATCATAGGTTATTGATGGTTGCAAAATTGGACAATAACCACG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR TCA 90 bp | CGTGGTTATTGTCCAATTTTGCAACCATCAATAACCTATGATCCAATATCTTCACAATATCTTCACTGCTaGCAAAGAGAACAGTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RGYCPILQPSITYDPISSQYLHC*QREQFL Trigger: TAGAAACTGTTCTCTTTGTCAGCAGTGAAGATATTG...TGAAGATATTGGATCATAGGTTATTGATGGTTGCAAAATTGGACAATAACCACG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311623.9 ENST00000616557.1 |
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| CDS TCA 90 bp | GGTGAGTGTAAAGATCTGGCAGTCGGTAGCGTCCGCATTATTTTGTaGATCTCCAGGAGGCGTAAATACCTCTTCTTGTCCTTCTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GECKDLAVGSVRIIL*ISRRRKYLFLSFCH Trigger: GTGGCAGAAGGACAAGAAGAGGTATTTACGCCTCCTGGAGATTCACAAAATAATGCGGACGCTACCGACTGCCAGATCTTTACACTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311623.9 ENST00000616557.1 |
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| CDS-3UTR CAA 90 bp | GAGTCTTCTTCTGGGGAAATACCTGGGTGTCTTTGTGATGGGCTGGGCCCTTGTCGTAAATACCTCTTCTaGTCCTTTAAGATGTGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: ESSSGEIPGCLCDGLGPCRKYLF*SFKMCG Trigger: TCCGCACATCTTAAAGGACAAGAAGAGGTATTTACG...ACAAGGGCCCAGCCCATCACAAAGACACCCAGGTATTTCCCCAGAAGAAGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511093.5 |
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| CDS TCA 90 bp | GGTGAGTGTAAAGATCTGGCAGTCGGTAGCGTCCGCATTATTTTGTaGATCTCCAGGAGGCGTAAATACCTCTTCTTGTCCATGTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GECKDLAVGSVRIIL*ISRRRKYLFLSMCK Trigger: TTTGCACATGGACAAGAAGAGGTATTTACGCCTCCTGGAGATTCACAAAATAATGCGGACGCTACCGACTGCCAGATCTTTACACTCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435974.2 |
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| CDS-3UTR CAA 90 bp | CAATGCACCTTGCTCTGTATGTTTTCCAATGAGTATAAAAACGGTGTCATCAGTCAGCAACAGCAACTTTaGCATGTAGATCTTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QCTLLCMFSNEYKNGVISQQQQL*HVDLGR Trigger: CCTCCCAAGATCTACATGCAAAAGTTGCTGTTGCTG...ACTGATGACACCGTTTTTATACTCATTGGAAAACATACAGAGCAAGGTGCATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR CAA 90 bp | TGCAATCTGTGGGATTTGTTTCTCATATTGCACCCTGAGAATACAAGGTTCCAATGTGACCATAAGAGGTaGAGGATAAAAATAACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CNLWDLFLILHPENTRFQCDHKR*RIKITW Trigger: CCACGTTATTTTTATCCTCAACCTCTTATGGTCACA...TTGGAACCTTGTATTCTCAGGGTGCAATATGAGAAACAAATCCCACAGATTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR CAA 90 bp | ATGGATTCTCTCAGCATCTTAGTATGGATAGGAATTACTAGAGCCACCCATTTAACAAGGTTCCAAGAGTaGAGTGAACTTATCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: MDSLSILVWIGITRATHLTRFQE*SELISV Trigger: CACAGAGATAAGTTCACTCAACTCTTGGAACCTTGT...TAAATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR CAA 90 bp | GACCATAAGAGGTTGAGGATAAAAATAACGTGGTTATTGTCCAATTTTGCAACCTGTGACCATAAGAGGTaGAGGATAAAAATAACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DHKRLRIKITWLLSNFATCDHKR*RIKITW Trigger: CCACGTTATTTTTATCCTCAACCTCTTATGGTCACA...GGTTGCAAAATTGGACAATAACCACGTTATTTTTATCCTCAACCTCTTATGGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000311623.9 ENST00000616557.1 |
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| CDS-3UTR CAA 90 bp | TGTGGAGTTCTAGAGGTACCAGAATATTCTTGTAGCAGTTTAATCAGGCATTTTCTTTGTCAATGCACCTaGCTCTGTATGTTTTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: CGVLEVPEYSCSSLIRHFLCQCT*LCMFSN Trigger: ATTGGAAAACATACAGAGCAAGGTGCATTGACAAAG...AAAATGCCTGATTAAACTGCTACAAGAATATTCTGGTACCTCTAGAACTCCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS-3UTR CAA 90 bp | GACCATAAGAGGTTGAGGATAAAAATAACGTGGTTATTGTCCAATTTTGCAACCCTTTTAAAGTTTACTTaGTCAATGCACCTTGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: DHKRLRIKITWLLSNFATLLKFT*SMHLAL Trigger: CAGAGCAAGGTGCATTGACAAAGTAAACTTTAAAAG...GGTTGCAAAATTGGACAATAACCACGTTATTTTTATCCTCAACCTCTTATGGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000616557.1 |
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| CDS CCA 72 bp | AAATGGAAGGGACACCTGGGTGTCTTTGTGATGGGCTaGGCCCTTGTGACCGGACTCCTCGGGGCAGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: KWKGHLGVFVMG*ALVTGLLGAGG Trigger: TCCACCTGCCCCGAGGAGTCCGGTCACAAGGGCCCAGCCCATCACAAAGACACCCAGGTGTCCCTTCCATTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311623.9 ENST00000435974.2 |
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| CDS CCA 72 bp | CCAGTAACCAGTAGGAGAAGCAGTGTCTGCGAGCCATaGCTTCTACTGAGCAGTCACTGCGTTGAACCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: PVTSRRSSVCEP*LLLSSHCVEPD Trigger: ATCAGGTTCAACGCAGTGACTGCTCAGTAGAAGCCATGGCTCGCAGACACTGCTTCTCCTACTGGTTACTGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000511093.5 ENST00000514064.1 ENST00000616557.1 |
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