RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ODAM (Homo sapiens)

Ensembl gene IDs: ENSG00000109205

Ensembl transcript IDs: ENST00000396094.6, ENST00000506248.1, ENST00000510709.6, ENST00000510847.1, ENST00000514097.5, ENST00000683306.1

Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAGCAATTTCAGGAGCTGTGCCTAGTTGGGGATCAAAAGCTAGTTaGTGCTGTCCTCCTGATATAGCAGGTTCTGCTAGTTGTGGAATG +
Preference number: 1 (lower is better)
Translates to: TAISGAVPSWGSKAS*CCPPDIAGSASCGM
Trigger: CATTCCACAACTAGCAGAACCTGCTATATCAGGAGGACAGCAGCAACTAGCTTTTGATCCCCAACTAGGCACAGCTCCTGAAATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510847.1
3UTR CCA 90 bp TCTTCTCCTGTTGACATCACAGCAATTTCAGGAGCTGTGCCTAGTTaGGGATCAAAAGCTAGTTGCTGCTGTCCTCCTGATATAGCAGGT +
Preference number: 1 (lower is better)
Translates to: SSPVDITAISGAVPS*GSKASCCCPPDIAG
Trigger: ACCTGCTATATCAGGAGGACAGCAGCAACTAGCTTTTGATCCCCAACTAGGCACAGCTCCTGAAATTGCTGTGATGTCAACAGGAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510847.1
3UTR GCA 90 bp ATGGTATCTCTTCTCCTGTTGACATCACAGCAATTTCAGGAGCTGTaGCTAGTTGGGGATCAAAAGCTAGTTGCTGCTGTCCTCCTGATA +
Preference number: 1 (lower is better)
Translates to: MVSLLLLTSQQFQEL*LVGDQKLVAAVLLI
Trigger: TATCAGGAGGACAGCAGCAACTAGCTTTTGATCCCCAACTAGGCACAGCTCCTGAAATTGCTGTGATGTCAACAGGAGAAGAGATACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510847.1
3UTR TCA 90 bp ATTTTACTTCATCAGTTCCAATCACAACACTCATCATACATCCAATaGCAATATACATATCTTCATGGGTACTACCATTTTGCAGAGGCA +
Preference number: 1 (lower is better)
Translates to: ILLHQFQSQHSSYIQ*QYTYLHGYYHFAEA
Trigger: TGCCTCTGCAAAATGGTAGTACCCATGAAGATATGTATATTGTCATTGGATGTATGATGAGTGTTGTGATTGGAACTGATGAAGTAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396094.6
3UTR-3UTR TCA 90 bp GCTGTGCCTAGTTGGGGATCAAAAGCTAGTTGCTGCTGTCCTCCTGATATAGCATCTTGTTTGTTGAGGTaGCCTTGGAACTGTTTGCTG +
Preference number: 2 (lower is better)
Translates to: AVPSWGSKASCCCPPDIASCLLR*PWNCLL
Trigger: CAGCAAACAGTTCCAAGGTCACCTCAACAAACAAGA...TGCTATATCAGGAGGACAGCAGCAACTAGCTTTTGATCCCCAACTAGGCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510847.1
3UTR CAA 90 bp GTATCTGCTCCTCATACTGTTGCTGTCTTGTTTGTTGAGGTGACCTaGGAACTGTTTGCTGAGGTTGTTCCCAGGGTAGGACCATGTAAA +
Preference number: 2 (lower is better)
Translates to: VSAPHTVAVLFVEVT*ELFAEVVPRVGPCK
Trigger: TTTACATGGTCCTACCCTGGGAACAACCTCAGCAAACAGTTCCAAGGTCACCTCAACAAACAAGACAGCAACAGTATGAGGAGCAGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510847.1
3UTR-3UTR CCA 90 bp GTTGAGGGCATGAAAACTCCTGCACTGTCATGTCTAAAGTTGATCGCTTCTTTTGGAGCTGTGCCTAGTTaGGGATCAAAAGCTAGTTGC +
Preference number: 2 (lower is better)
Translates to: VEGMKTPALSCLKLIASFGAVPS*GSKASC
Trigger: GCAACTAGCTTTTGATCCCCAACTAGGCACAGCTCC...AAAAGAAGCGATCAACTTTAGACATGACAGTGCAGGAGTTTTCATGCCCTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510847.1
3UTR-3UTR TCA 90 bp GTTTGGTCTACAGCAGAAGTGAAAACATTGGTTGTGCTGGGTTTTGGTGAAGTTTGCTGTCTTGTTTGTTaGGGTGACCTTGGAACTGTT +
Preference number: 2 (lower is better)
Translates to: VWSTAEVKTLVVLGFGEVCCLVC*GDLGTV
Trigger: AACAGTTCCAAGGTCACCTCAACAAACAAGACAGCA...AACTTCACCAAAACCCAGCACAACCAATGTTTTCACTTCTGCTGTAGACCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510847.1
3UTR-3UTR TCA 90 bp TTCTGGGAGCTCTGGGGTAATAGTTTGGTCTACAGCAGAAGTGAAAACATTGGTTATCTCTTCTCCTGTTaGCATCACAGCAATTTCAGG +
Preference number: 2 (lower is better)
Translates to: FWELWGNSLVYSRSENIGYLFSC*HHSNFR
Trigger: CCTGAAATTGCTGTGATGTCAACAGGAGAAGAGATA...ACCAATGTTTTCACTTCTGCTGTAGACCAAACTATTACCCCAGAGCTCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510847.1
3UTR-3UTR CCA 90 bp TTGACATCACAGCAATTTCAGGAGCTGTGCCTAGTTGGGGATCAAAAGCTAGTTAAATTGAGCATAGAATaGTATCTGCTCCTCATACTG +
Preference number: 2 (lower is better)
Translates to: LTSQQFQELCLVGDQKLVKLSIE*YLLLIL
Trigger: CAGTATGAGGAGCAGATACCATTCTATGCTCAATTT...AACTAGCTTTTGATCCCCAACTAGGCACAGCTCCTGAAATTGCTGTGATGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510847.1
3UTR TCA 72 bp CTGCTCCTCATACTGTTGCTGTCTTGTTTGTTGAGGTaGCCTTGGAACTGTTTGCTGAGGTTGTTCCCAGGG +
Preference number: 3 (lower is better)
Translates to: LLLILLLSCLLR*PWNCLLRLFPG
Trigger: CCCTGGGAACAACCTCAGCAAACAGTTCCAAGGTCACCTCAACAAACAAGACAGCAACAGTATGAGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510847.1
3UTR GCA 72 bp TCAGGAGCTGTGCCTAGTTGGGGATCAAAAGCTAGTTaGTGCTGTCCTCCTGATATAGCAGGTTCTGCTAGT +
Preference number: 3 (lower is better)
Translates to: SGAVPSWGSKAS*CCPPDIAGSAS
Trigger: ACTAGCAGAACCTGCTATATCAGGAGGACAGCAGCAACTAGCTTTTGATCCCCAACTAGGCACAGCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510847.1
3UTR CCA 72 bp GTTGACATCACAGCAATTTCAGGAGCTGTGCCTAGTTaGGGATCAAAAGCTAGTTGCTGCTGTCCTCCTGAT +
Preference number: 3 (lower is better)
Translates to: VDITAISGAVPS*GSKASCCCPPD
Trigger: ATCAGGAGGACAGCAGCAACTAGCTTTTGATCCCCAACTAGGCACAGCTCCTGAAATTGCTGTGATGTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510847.1
3UTR CCA 72 bp TTGTCCTTCTCTTCTGGGAGCTCTGGGGTAATAGTTTaGTCTACAGCAGAAGTGAAAACATTGGTTGTGCTG +
Preference number: 3 (lower is better)
Translates to: LSFSSGSSGVIV*STAEVKTLVVL
Trigger: CAGCACAACCAATGTTTTCACTTCTGCTGTAGACCAAACTATTACCCCAGAGCTCCCAGAAGAGAAGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510847.1
3UTR TCA 72 bp AAGGCATGGCCACATCTTTTTCCCAAAATGTCTGAATaGTCAGGGCAACTTCTTATGGTTCCCTTAGGCTGT +
Preference number: 3 (lower is better)
Translates to: KAWPHLFPKMSE*SGQLLMVPLGC
Trigger: ACAGCCTAAGGGAACCATAAGAAGTTGCCCTGATCATTCAGACATTTTGGGAAAAAGATGTGGCCATGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510847.1
3UTR-3UTR CAA 90 bp GTTTGGTCTACAGCAGAAGTGAAAACATTGGTTGTGCTGGGTTTTGGTGAAGTTTTTGTTGAGGTGACCTaGGAACTGTTTGCTGAGGTT +
Preference number: 3 (lower is better)
Translates to: VWSTAEVKTLVVLGFGEVFVEVT*ELFAEV
Trigger: AACCTCAGCAAACAGTTCCAAGGTCACCTCAACAAA...AACTTCACCAAAACCCAGCACAACCAATGTTTTCACTTCTGCTGTAGACCAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510847.1
3UTR-3UTR CAA 90 bp AGCTCTGGGGTAATAGTTTGGTCTACAGCAGAAGTGAAAACATTGGTTGTGCTGGTATCTCTTCTCCTGTaGACATCACAGCAATTTCAG +
Preference number: 3 (lower is better)
Translates to: SSGVIVWSTAEVKTLVVLVSLLL*TSQQFQ
Trigger: CTGAAATTGCTGTGATGTCAACAGGAGAAGAGATAC...CAGCACAACCAATGTTTTCACTTCTGCTGTAGACCAAACTATTACCCCAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510847.1
3UTR-3UTR CAA 90 bp TTGACATCACAGCAATTTCAGGAGCTGTGCCTAGTTGGGGATCAAAAGCTAGTTTGGAATGTATCCAAATaGAGCATAGAATGGTATCTG +
Preference number: 3 (lower is better)
Translates to: LTSQQFQELCLVGDQKLVWNVSK*SIEWYL
Trigger: CAGATACCATTCTATGCTCAATTTGGATACATTCCA...AACTAGCTTTTGATCCCCAACTAGGCACAGCTCCTGAAATTGCTGTGATGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR TCA 90 bp CAGCAATTTCAGGAGCTGTGCCTAGTTGGGGATCAAAAGCTAGTTGCTGCTGTCGGTCTACAGCAGAAGTaGAAACATTGGTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QQFQELCLVGDQKLVAAVGLQQK*KHWLCW
Trigger: CCAGCACAACCAATGTTTTCACTTCTGCTGTAGACC...GACAGCAGCAACTAGCTTTTGATCCCCAACTAGGCACAGCTCCTGAAATTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR CCA 90 bp GTTTGGTCTACAGCAGAAGTGAAAACATTGGTTGTGCTGGGTTTTGGTGAAGTTAGGGCATCACGTGACTaGGGCCTGGTTGTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: VWSTAEVKTLVVLGFGEVRASRD*GLVVSE
Trigger: CTCAGACACAACCAGGCCCCAGTCACGTGATGCCCT...AACTTCACCAAAACCCAGCACAACCAATGTTTTCACTTCTGCTGTAGACCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510847.1
3UTR CAA 72 bp CCTCATACTGTTGCTGTCTTGTTTGTTGAGGTGACCTaGGAACTGTTTGCTGAGGTTGTTCCCAGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: PHTVAVLFVEVT*ELFAEVVPRVG
Trigger: TCCTACCCTGGGAACAACCTCAGCAAACAGTTCCAAGGTCACCTCAACAAACAAGACAGCAACAGTATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR TCA 90 bp GAGGTGACCTTGGAACTGTTTGCTGAGGTTGTTCCCAGGGTAGGACCATGTAAAGCTCTTGAGGCATTTTaGAGGAGAATACATAGGGCA +
Preference number: 4 (lower is better)
Translates to: EVTLELFAEVVPRVGPCKALEAF*RRIHRA
Trigger: TGCCCTATGTATTCTCCTTCAAAATGCCTCAAGAGC...TTTACATGGTCCTACCCTGGGAACAACCTCAGCAAACAGTTCCAAGGTCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR TCA 90 bp AGGCTGTCAGTCTTGTCCTTCTCTTCTGGGAGCTCTGGGGTAATAGTTTGGTCTTCTTGTTTGTTGAGGTaGCCTTGGAACTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: RLSVLSFSSGSSGVIVWSSCLLR*PWNCLL
Trigger: CAGCAAACAGTTCCAAGGTCACCTCAACAAACAAGA...AGACCAAACTATTACCCCAGAGCTCCCAGAAGAGAAGGACAAGACTGACAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR TCA 90 bp GCTGTGCCTAGTTGGGGATCAAAAGCTAGTTGCTGCTGTCCTCCTGATATAGCATGCTGTCTTGTTTGTTaGGGTGACCTTGGAACTGTT +
Preference number: 4 (lower is better)
Translates to: AVPSWGSKASCCCPPDIACCLVC*GDLGTV
Trigger: AACAGTTCCAAGGTCACCTCAACAAACAAGACAGCA...TGCTATATCAGGAGGACAGCAGCAACTAGCTTTTGATCCCCAACTAGGCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR CCA 90 bp CTAGTTGTGGAATGTATCCAAATTGAGCATAGAATGGTATCTGCTCCTCATACTCACGTGACTGGGGCCTaGTTGTGTCTGAGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: LVVECIQIEHRMVSAPHTHVTGA*LCLRRC
Trigger: ACACCGCCTCAGACACAACCAGGCCCCAGTCACGTG...AGTATGAGGAGCAGATACCATTCTATGCTCAATTTGGATACATTCCACAACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR TCA 90 bp GCTGTCAGTCTTGTCCTTCTCTTCTGGGAGCTCTGGGGTAATAGTTTGGTCTACCCCAAAATGTCTGAATaGTCAGGGCAACTTCTTATG +
Preference number: 4 (lower is better)
Translates to: AVSLVLLFWELWGNSLVYPKMSE*SGQLLM
Trigger: CATAAGAAGTTGCCCTGATCATTCAGACATTTTGGG...GTAGACCAAACTATTACCCCAGAGCTCCCAGAAGAGAAGGACAAGACTGACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR TCA 90 bp ACCTTGGAACTGTTTGCTGAGGTTGTTCCCAGGGTAGGACCATGTAAACTGGATTTCTGTCCTTGCTCTTaGGGCATTTTGAAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: TLELFAEVVPRVGPCKLDFCPCS*GILKEN
Trigger: ATTCTCCTTCAAAATGCCTCAAGAGCAAGGACAGAA...ATCCAGTTTACATGGTCCTACCCTGGGAACAACCTCAGCAAACAGTTCCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR CCA 90 bp CATCATACATCCAATGACAATATACATATCTTCATGGGTACTACCATTTTGCAGCCTGCCTGGGCTCCTTaGGCAAAACTGGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: HHTSNDNIHIFMGTTILQPAWAP*AKLASP
Trigger: AGGAGAGGCCAGTTTTGCCCAAGGAGCCCAGGCAGG...CTGCAAAATGGTAGTACCCATGAAGATATGTATATTGTCATTGGATGTATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CCA 90 bp CCAATCACAACACTCATCATACATCCAATGACAATATACATATCTTCATGGGTACACGTGACTGGGGCCTaGTTGTGTCTGAGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: PITTLIIHPMTIYISSWVHVTGA*LCLRRC
Trigger: ACACCGCCTCAGACACAACCAGGCCCCAGTCACGTG...TACCCATGAAGATATGTATATTGTCATTGGATGTATGATGAGTGTTGTGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CCA 90 bp GTTTGGTCTACAGCAGAAGTGAAAACATTGGTTGTGCTGGGTTTTGGTGAAGTTGGAGCTGTGCCTAGTTaGGGATCAAAAGCTAGTTGC +
Preference number: 4 (lower is better)
Translates to: VWSTAEVKTLVVLGFGEVGAVPS*GSKASC
Trigger: GCAACTAGCTTTTGATCCCCAACTAGGCACAGCTCC...AACTTCACCAAAACCCAGCACAACCAATGTTTTCACTTCTGCTGTAGACCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510847.1
3UTR CAA 72 bp CTTGTCCTTCTCTTCTGGGAGCTCTGGGGTAATAGTTaGGTCTACAGCAGAAGTGAAAACATTGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: LVLLFWELWGNS*VYSRSENIGCA
Trigger: AGCACAACCAATGTTTTCACTTCTGCTGTAGACCAAACTATTACCCCAGAGCTCCCAGAAGAGAAGGACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR GCA 90 bp CATCATACATCCAATGACAATATACATATCTTCATGGGTACTACCATTTTGCAGGGGATCAACTTGGCCTaGCTGGGCTCCTTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: HHTSNDNIHIFMGTTILQGINLA*LGSLGK
Trigger: TTTGCCCAAGGAGCCCAGGCAGGCCAAGTTGATCCC...CTGCAAAATGGTAGTACCCATGAAGATATGTATATTGTCATTGGATGTATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR GCA 90 bp CTTCTCTTCTGGGAGCTCTGGGGTAATAGTTTGGTCTACAGCAGAAGTGAAAACGGATCAAAAGCTAGTTaGTGCTGTCCTCCTGATATA +
Preference number: 4 (lower is better)
Translates to: LLFWELWGNSLVYSRSENGSKAS*CCPPDI
Trigger: TATATCAGGAGGACAGCAGCAACTAGCTTTTGATCC...GTTTTCACTTCTGCTGTAGACCAAACTATTACCCCAGAGCTCCCAGAAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR GCA 90 bp TCTGCTCCTCATACTGTTGCTGTCTTGTTTGTTGAGGTGACCTTGGAACTGTTTCAATTTCAGGAGCTGTaGCTAGTTGGGGATCAAAAG +
Preference number: 4 (lower is better)
Translates to: SAPHTVAVLFVEVTLELFQFQEL*LVGDQK
Trigger: CTTTTGATCCCCAACTAGGCACAGCTCCTGAAATTG...AAACAGTTCCAAGGTCACCTCAACAAACAAGACAGCAACAGTATGAGGAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR CCA 90 bp ATCTTCATGGGTACTACCATTTTGCAGAGGCATCATTTACTAATGCAATTATCCTGTAAGGGATCAACTTaGCCTGCCTGGGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: IFMGTTILQRHHLLMQLSCKGST*PAWAPW
Trigger: CCAAGGAGCCCAGGCAGGCCAAGTTGATCCCTTACA...GGATAATTGCATTAGTAAATGATGCCTCTGCAAAATGGTAGTACCCATGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CCA 90 bp TCCAATCACAACACTCATCATACATCCAATGACAATATACATATCTTCATGGGTAGGGCATCACGTGACTaGGGCCTGGTTGTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SNHNTHHTSNDNIHIFMGRASRD*GLVVSE
Trigger: CTCAGACACAACCAGGCCCCAGTCACGTGATGCCCT...ACCCATGAAGATATGTATATTGTCATTGGATGTATGATGAGTGTTGTGATTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CCA 90 bp GCTGTGCCTAGTTGGGGATCAAAAGCTAGTTGCTGCTGTCCTCCTGATATAGCAAAATTGAGCATAGAATaGTATCTGCTCCTCATACTG +
Preference number: 4 (lower is better)
Translates to: AVPSWGSKASCCCPPDIAKLSIE*YLLLIL
Trigger: CAGTATGAGGAGCAGATACCATTCTATGCTCAATTT...TGCTATATCAGGAGGACAGCAGCAACTAGCTTTTGATCCCCAACTAGGCACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR TCA 90 bp CATCATACATCCAATGACAATATACATATCTTCATGGGTACTACCATTTTGCAGTGGGATAAGTGGGGCTaGCAATGTGGCTCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: HHTSNDNIHIFMGTTILQWDKWG*QCGSQE
Trigger: TTCCTGGGAGCCACATTGTCAGCCCCACTTATCCCA...CTGCAAAATGGTAGTACCCATGAAGATATGTATATTGTCATTGGATGTATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR TCA 90 bp CACAACACTCATCATACATCCAATGACAATATACATATCTTCATGGGTACTACCGAGAGTCCTGGAATTTaGGCCTGCTGCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: HNTHHTSNDNIHIFMGTTESPGI*ACCCCC
Trigger: ACAACAGCAGCAGCAGGCTCAAATTCCAGGACTCTC...GGTAGTACCCATGAAGATATGTATATTGTCATTGGATGTATGATGAGTGTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR TCA 90 bp GCTCCTCATACTGTTGCTGTCTTGTTTGTTGAGGTGACCTTGGAACTGTTTGCTTTTTCCCAAAATGTCTaGATGATCAGGGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: APHTVAVLFVEVTLELFAFSQNV*MIRATS
Trigger: AGAAGTTGCCCTGATCATTCAGACATTTTGGGAAAA...AGCAAACAGTTCCAAGGTCACCTCAACAAACAAGACAGCAACAGTATGAGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR GCA 90 bp AGCTCTGGGGTAATAGTTTGGTCTACAGCAGAAGTGAAAACATTGGTTGTGCTGTCAAAAGCTAGTTGCTaGTGTCCTCCTGATATAGCA +
Preference number: 4 (lower is better)
Translates to: SSGVIVWSTAEVKTLVVLSKASC*CPPDIA
Trigger: TGCTATATCAGGAGGACAGCAGCAACTAGCTTTTGA...CAGCACAACCAATGTTTTCACTTCTGCTGTAGACCAAACTATTACCCCAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR GCA 90 bp AGCTCTGGGGTAATAGTTTGGTCTACAGCAGAAGTGAAAACATTGGTTGTGCTGGGGCATGAAAACTCCTaGACTGTCATGTCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: SSGVIVWSTAEVKTLVVLGHENS*TVMSKV
Trigger: AACTTTAGACATGACAGTGCAGGAGTTTTCATGCCC...CAGCACAACCAATGTTTTCACTTCTGCTGTAGACCAAACTATTACCCCAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR CCA 90 bp CACAACACTCATCATACATCCAATGACAATATACATATCTTCATGGGTACTACCGAACTGGGAGAGTCCTaGAATTTGAGCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HNTHHTSNDNIHIFMGTTELGES*NLSLLL
Trigger: CAGCAGCAGGCTCAAATTCCAGGACTCTCCCAGTTC...GGTAGTACCCATGAAGATATGTATATTGTCATTGGATGTATGATGAGTGTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CCA 90 bp CATCATACATCCAATGACAATATACATATCTTCATGGGTACTACCATTTTGCAGTCAACTTGGCCTGCCTaGGCTCCTTGGGCAAAACTG +
Preference number: 4 (lower is better)
Translates to: HHTSNDNIHIFMGTTILQSTWPA*APWAKL
Trigger: CAGTTTTGCCCAAGGAGCCCAGGCAGGCCAAGTTGA...CTGCAAAATGGTAGTACCCATGAAGATATGTATATTGTCATTGGATGTATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CCA 90 bp GCTCCTCATACTGTTGCTGTCTTGTTTGTTGAGGTGACCTTGGAACTGTTTGCTTCTGGGGTAATAGTTTaGTCTACAGCAGAAGTGAAA +
Preference number: 4 (lower is better)
Translates to: APHTVAVLFVEVTLELFASGVIV*STAEVK
Trigger: TTTCACTTCTGCTGTAGACCAAACTATTACCCCAGA...AGCAAACAGTTCCAAGGTCACCTCAACAAACAAGACAGCAACAGTATGAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR CCA 90 bp ATCTTCATGGGTACTACCATTTTGCAGAGGCATCATTTACTAATGCAATTATCCGGAGCTGTGCCTAGTTaGGGATCAAAAGCTAGTTGC +
Preference number: 4 (lower is better)
Translates to: IFMGTTILQRHHLLMQLSGAVPS*GSKASC
Trigger: GCAACTAGCTTTTGATCCCCAACTAGGCACAGCTCC...GGATAATTGCATTAGTAAATGATGCCTCTGCAAAATGGTAGTACCCATGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CCA 90 bp GAGGTTGTTCCCAGGGTAGGACCATGTAAACTGGATAGTATTGAAACATCCTATAAACATTGGTTGTGCTaGGTTTTGGTGAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: EVVPRVGPCKLDSIETSYKHWLC*VLVKLR
Trigger: CCTCAACTTCACCAAAACCCAGCACAACCAATGTTT...ATAGGATGTTTCAATACTATCCAGTTTACATGGTCCTACCCTGGGAACAACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR TCA 90 bp CCAATCACAACACTCATCATACATCCAATGACAATATACATATCTTCATGGGTACCTGTTAAGGGTATCTaGTTTGGGAGCAGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PITTLIIHPMTIYISSWVPVKGI*FGSSPA
Trigger: TGCTGGACTGCTCCCAAATCAGATACCCTTAACAGG...TACCCATGAAGATATGTATATTGTCATTGGATGTATGATGAGTGTTGTGATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CCA 90 bp CATATCTTCATGGGTACTACCATTTTGCAGAGGCATCATTTACTAATGCAATTACTCCTTGGGCAAAACTaGCCTCTCCTGTTAAGGGTA +
Preference number: 4 (lower is better)
Translates to: HIFMGTTILQRHHLLMQLLLGQN*PLLLRV
Trigger: TACCCTTAACAGGAGAGGCCAGTTTTGCCCAAGGAG...TAATTGCATTAGTAAATGATGCCTCTGCAAAATGGTAGTACCCATGAAGATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR TCA 90 bp ATCTTCATGGGTACTACCATTTTGCAGAGGCATCATTTACTAATGCAATTATCCGAATTAAGTGGGCCCTaGAGTTGTAGTGGCAAAAGT +
Preference number: 4 (lower is better)
Translates to: IFMGTTILQRHHLLMQLSELSGP*SCSGKS
Trigger: ACTTTTGCCACTACAACTTCAGGGCCCACTTAATTC...GGATAATTGCATTAGTAAATGATGCCTCTGCAAAATGGTAGTACCCATGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR TCA 90 bp CCAATCACAACACTCATCATACATCCAATGACAATATACATATCTTCATGGGTAGAAAGGTGGAATCCATaGATTAAGTGGGCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: PITTLIIHPMTIYISSWVERWNP*IKWALK
Trigger: CTTCAGGGCCCACTTAATTCATGGATTCCACCTTTC...TACCCATGAAGATATGTATATTGTCATTGGATGTATGATGAGTGTTGTGATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR TCA 90 bp CTAGTTGTGGAATGTATCCAAATTGAGCATAGAATGGTATCTGCTCCTCATACTTATCTCTTCTCCTGTTaGCATCACAGCAATTTCAGG +
Preference number: 4 (lower is better)
Translates to: LVVECIQIEHRMVSAPHTYLFSC*HHSNFR
Trigger: CCTGAAATTGCTGTGATGTCAACAGGAGAAGAGATA...AGTATGAGGAGCAGATACCATTCTATGCTCAATTTGGATACATTCCACAACTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR TCA 90 bp ATACATATCTTCATGGGTACTACCATTTTGCAGAGGCATCATTTACTAATGCAAGGTCTACAGCAGAAGTaGAAACATTGGTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: IHIFMGTTILQRHHLLMQGLQQK*KHWLCW
Trigger: CCAGCACAACCAATGTTTTCACTTCTGCTGTAGACC...TTGCATTAGTAAATGATGCCTCTGCAAAATGGTAGTACCCATGAAGATATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CCA 90 bp CACAACACTCATCATACATCCAATGACAATATACATATCTTCATGGGTACTACCAGCAGTCCAGCAAACTaGTCTAGAGCTGATAAAGAG +
Preference number: 4 (lower is better)
Translates to: HNTHHTSNDNIHIFMGTTSSPAN*SRADKE
Trigger: CTCTTTATCAGCTCTAGACCAGTTTGCTGGACTGCT...GGTAGTACCCATGAAGATATGTATATTGTCATTGGATGTATGATGAGTGTTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR TCA 90 bp CATCATACATCCAATGACAATATACATATCTTCATGGGTACTACCATTTTGCAGGCTCTTGAGGCATTTTaGAGGAGAATACATAGGGCA +
Preference number: 4 (lower is better)
Translates to: HHTSNDNIHIFMGTTILQALEAF*RRIHRA
Trigger: TGCCCTATGTATTCTCCTTCAAAATGCCTCAAGAGC...CTGCAAAATGGTAGTACCCATGAAGATATGTATATTGTCATTGGATGTATGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR TCA 90 bp CATATCTTCATGGGTACTACCATTTTGCAGAGGCATCATTTACTAATGCAATTATCTTGTTTGTTGAGGTaGCCTTGGAACTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: HIFMGTTILQRHHLLMQLSCLLR*PWNCLL
Trigger: CAGCAAACAGTTCCAAGGTCACCTCAACAAACAAGA...TAATTGCATTAGTAAATGATGCCTCTGCAAAATGGTAGTACCCATGAAGATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR TCA 90 bp CATCATACATCCAATGACAATATACATATCTTCATGGGTACTACCATTTTGCAGTGCTGTCTTGTTTGTTaGGGTGACCTTGGAACTGTT +
Preference number: 4 (lower is better)
Translates to: HHTSNDNIHIFMGTTILQCCLVC*GDLGTV
Trigger: AACAGTTCCAAGGTCACCTCAACAAACAAGACAGCA...CTGCAAAATGGTAGTACCCATGAAGATATGTATATTGTCATTGGATGTATGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR GCA 90 bp ATCTTCATGGGTACTACCATTTTGCAGAGGCATCATTTACTAATGCAATTATCCTCAAAAGCTAGTTGCTaGTGTCCTCCTGATATAGCA +
Preference number: 4 (lower is better)
Translates to: IFMGTTILQRHHLLMQLSSKASC*CPPDIA
Trigger: TGCTATATCAGGAGGACAGCAGCAACTAGCTTTTGA...GGATAATTGCATTAGTAAATGATGCCTCTGCAAAATGGTAGTACCCATGAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR GCA 90 bp TCCAATCACAACACTCATCATACATCCAATGACAATATACATATCTTCATGGGTCAATTTCAGGAGCTGTaGCTAGTTGGGGATCAAAAG +
Preference number: 4 (lower is better)
Translates to: SNHNTHHTSNDNIHIFMGQFQEL*LVGDQK
Trigger: CTTTTGATCCCCAACTAGGCACAGCTCCTGAAATTG...ACCCATGAAGATATGTATATTGTCATTGGATGTATGATGAGTGTTGTGATTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396094.6
3UTR CAA 72 bp GAGGGCATGAAAACTCCTGCACTGTCATGTCTAAAGTaGATCGCTTCTTTTTGTAAATATGGTATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: EGMKTPALSCLK*IASFCKYGISS
Trigger: AGAAGAGATACCATATTTACAAAAAGAAGCGATCAACTTTAGACATGACAGTGCAGGAGTTTTCATGCCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR TCA 90 bp ATACATATCTTCATGGGTACTACCATTTTGCAGAGGCATCATTTACTAATGCAAATCTGTCCTTGCTCTTaGGGCATTTTGAAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: IHIFMGTTILQRHHLLMQICPCS*GILKEN
Trigger: ATTCTCCTTCAAAATGCCTCAAGAGCAAGGACAGAT...TTGCATTAGTAAATGATGCCTCTGCAAAATGGTAGTACCCATGAAGATATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR TCA 90 bp CATATCTTCATGGGTACTACCATTTTGCAGAGGCATCATTTACTAATGCAATTATATCTCTTCTCCTGTTaGCATCACAGCAATTTCAGG +
Preference number: 4 (lower is better)
Translates to: HIFMGTTILQRHHLLMQLYLFSC*HHSNFR
Trigger: CCTGAAATTGCTGTGATGTCAACAGGAGAAGAGATA...TAATTGCATTAGTAAATGATGCCTCTGCAAAATGGTAGTACCCATGAAGATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR TCA 90 bp ATACATATCTTCATGGGTACTACCATTTTGCAGAGGCATCATTTACTAATGCAACCCAAAATGTCTGAATaGTCAGGGCAACTTCTTATG +
Preference number: 4 (lower is better)
Translates to: IHIFMGTTILQRHHLLMQPKMSE*SGQLLM
Trigger: CATAAGAAGTTGCCCTGATCATTCAGACATTTTGGG...TTGCATTAGTAAATGATGCCTCTGCAAAATGGTAGTACCCATGAAGATATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR GCA 90 bp TCCAATCACAACACTCATCATACATCCAATGACAATATACATATCTTCATGGGTGGATCAAAAGCTAGTTaGTGCTGTCCTCCTGATATA +
Preference number: 4 (lower is better)
Translates to: SNHNTHHTSNDNIHIFMGGSKAS*CCPPDI
Trigger: TATATCAGGAGGACAGCAGCAACTAGCTTTTGATCC...ACCCATGAAGATATGTATATTGTCATTGGATGTATGATGAGTGTTGTGATTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR GCA 90 bp TCCAATCACAACACTCATCATACATCCAATGACAATATACATATCTTCATGGGTGGGCATGAAAACTCCTaGACTGTCATGTCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: SNHNTHHTSNDNIHIFMGGHENS*TVMSKV
Trigger: AACTTTAGACATGACAGTGCAGGAGTTTTCATGCCC...ACCCATGAAGATATGTATATTGTCATTGGATGTATGATGAGTGTTGTGATTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CCA 90 bp CCAATCACAACACTCATCATACATCCAATGACAATATACATATCTTCATGGGTAAAACATTGGTTGTGCTaGGTTTTGGTGAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: PITTLIIHPMTIYISSWVKHWLC*VLVKLR
Trigger: CCTCAACTTCACCAAAACCCAGCACAACCAATGTTT...TACCCATGAAGATATGTATATTGTCATTGGATGTATGATGAGTGTTGTGATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR TCA 90 bp CATCATACATCCAATGACAATATACATATCTTCATGGGTACTACCATTTTGCAGTTTTCCCAAAATGTCTaGATGATCAGGGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: HHTSNDNIHIFMGTTILQFSQNV*MIRATS
Trigger: AGAAGTTGCCCTGATCATTCAGACATTTTGGGAAAA...CTGCAAAATGGTAGTACCCATGAAGATATGTATATTGTCATTGGATGTATGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CCA 90 bp CACAACACTCATCATACATCCAATGACAATATACATATCTTCATGGGTACTACCAAATTGAGCATAGAATaGTATCTGCTCCTCATACTG +
Preference number: 4 (lower is better)
Translates to: HNTHHTSNDNIHIFMGTTKLSIE*YLLLIL
Trigger: CAGTATGAGGAGCAGATACCATTCTATGCTCAATTT...GGTAGTACCCATGAAGATATGTATATTGTCATTGGATGTATGATGAGTGTTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CCA 90 bp CCAATCACAACACTCATCATACATCCAATGACAATATACATATCTTCATGGGTATCTGGGGTAATAGTTTaGTCTACAGCAGAAGTGAAA +
Preference number: 4 (lower is better)
Translates to: PITTLIIHPMTIYISSWVSGVIV*STAEVK
Trigger: TTTCACTTCTGCTGTAGACCAAACTATTACCCCAGA...TACCCATGAAGATATGTATATTGTCATTGGATGTATGATGAGTGTTGTGATTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS CCA 90 bp GCTGTAAGGGATCAACTTGGCCTGCCTGGGCTCCTTGGGCAAAACTaGCCTCTCCTGTTAAGGGTATCTGATTTGGGAGCAGTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: AVRDQLGLPGLLGQN*PLLLRVSDLGAVQQ
Trigger: TTGCTGGACTGCTCCCAAATCAGATACCCTTAACAGGAGAGGCCAGTTTTGCCCAAGGAGCCCAGGCAGGCCAAGTTGATCCCTTACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396094.6
ENST00000506248.1
ENST00000510709.6
ENST00000514097.5
ENST00000683306.1
CDS-3UTR CAA 90 bp GCTGTCAGTCTTGTCCTTCTCTTCTGGGAGCTCTGGGGTAATAGTTTGGTCTACCTTAGGCTGTCAGTCTaGTCCTTCTCTTCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: AVSLVLLFWELWGNSLVYLRLSV*SFSSGS
Trigger: GCTCCCAGAAGAGAAGGACAAGACTGACAGCCTAAG...GTAGACCAAACTATTACCCCAGAGCTCCCAGAAGAGAAGGACAAGACTGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS GCA 90 bp ACAGCAATTTCAGGAGCTGTGCCTAGTTGGGGATCAAAAGCTAGTTaGTGCTGTCCTCCTGATATAGCCTGCTCCTCATACTGTTGCTGT +
Preference number: 5 (lower is better)
Translates to: TAISGAVPSWGSKAS*CCPPDIACSSYCCC
Trigger: ACAGCAACAGTATGAGGAGCAGGCTATATCAGGAGGACAGCAGCAACTAGCTTTTGATCCCCAACTAGGCACAGCTCCTGAAATTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514097.5
CDS CCA 90 bp TCTTCTCCTGTTGACATCACAGCAATTTCAGGAGCTGTGCCTAGTTaGGGATCAAAAGCTAGTTGCTGCTGTCCTCCTGATATAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SSPVDITAISGAVPS*GSKASCCCPPDIAC
Trigger: GCAGGCTATATCAGGAGGACAGCAGCAACTAGCTTTTGATCCCCAACTAGGCACAGCTCCTGAAATTGCTGTGATGTCAACAGGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514097.5
CDS-3UTR CAA 90 bp GCTGTGCCTAGTTGGGGATCAAAAGCTAGTTGCTGCTGTCCTCCTGATATAGCAGTTCTGTCCTTGCTCTaGAGGCATTTTGAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: AVPSWGSKASCCCPPDIAVLSLL*RHFEGE
Trigger: TTCTCCTTCAAAATGCCTCAAGAGCAAGGACAGAAC...TGCTATATCAGGAGGACAGCAGCAACTAGCTTTTGATCCCCAACTAGGCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR CAA 90 bp GAGGTGACCTTGGAACTGTTTGCTGAGGTTGTTCCCAGGGTAGGACCATGTAAAGTATCTCTTCTCCTGTaGACATCACAGCAATTTCAG +
Preference number: 5 (lower is better)
Translates to: EVTLELFAEVVPRVGPCKVSLLL*TSQQFQ
Trigger: CTGAAATTGCTGTGATGTCAACAGGAGAAGAGATAC...TTTACATGGTCCTACCCTGGGAACAACCTCAGCAAACAGTTCCAAGGTCACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS TCA 90 bp AACTGGTCTAGAGCTGATAAAGAGAACTGGGAGAGTCCTGGAATTTaGGCCTGCTGCTGCTGTTGTAAAATTCCAGAGAAAGGTGGAATC +
Preference number: 5 (lower is better)
Translates to: NWSRADKENWESPGI*ACCCCCKIPEKGGI
Trigger: GATTCCACCTTTCTCTGGAATTTTACAACAGCAGCAGCAGGCTCAAATTCCAGGACTCTCCCAGTTCTCTTTATCAGCTCTAGACCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396094.6
ENST00000506248.1
ENST00000510709.6
ENST00000514097.5
ENST00000683306.1
CDS-3UTR CAA 90 bp ATGATCAGGGCAACTTCTTATGGTTCCCTTAGGCTGTCAGTCTTGTCCTTCTCTTTTGTTGAGGTGACCTaGGAACTGTTTGCTGAGGTT +
Preference number: 5 (lower is better)
Translates to: MIRATSYGSLRLSVLSFSFVEVT*ELFAEV
Trigger: AACCTCAGCAAACAGTTCCAAGGTCACCTCAACAAA...AGAGAAGGACAAGACTGACAGCCTAAGGGAACCATAAGAAGTTGCCCTGATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR CAA 90 bp TCTGCTCCTCATACTGTTGCTGTCTTGTTTGTTGAGGTGACCTTGGAACTGTTTCTGCTCCTCATACTGTaGCTGTCTTGTTTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: SAPHTVAVLFVEVTLELFLLLIL*LSCLLR
Trigger: CCTCAACAAACAAGACAGCAACAGTATGAGGAGCAG...AAACAGTTCCAAGGTCACCTCAACAAACAAGACAGCAACAGTATGAGGAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR CAA 90 bp CTTCTCTTCTGGGAGCTCTGGGGTAATAGTTTGGTCTACAGCAGAAGTGAAAACCTCTGGGGTAATAGTTaGGTCTACAGCAGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: LLFWELWGNSLVYSRSENLWGNS*VYSRSE
Trigger: TTCACTTCTGCTGTAGACCAAACTATTACCCCAGAG...GTTTTCACTTCTGCTGTAGACCAAACTATTACCCCAGAGCTCCCAGAAGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR CAA 90 bp TTGACATCACAGCAATTTCAGGAGCTGTGCCTAGTTGGGGATCAAAAGCTAGTTCATACTGTTGCTGTCTaGTTTGTTGAGGTGACCTTG +
Preference number: 5 (lower is better)
Translates to: LTSQQFQELCLVGDQKLVHTVAV*FVEVTL
Trigger: CAAGGTCACCTCAACAAACAAGACAGCAACAGTATG...AACTAGCTTTTGATCCCCAACTAGGCACAGCTCCTGAAATTGCTGTGATGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR CAA 90 bp GCTGTGCCTAGTTGGGGATCAAAAGCTAGTTGCTGCTGTCCTCCTGATATAGCATGGAATGTATCCAAATaGAGCATAGAATGGTATCTG +
Preference number: 5 (lower is better)
Translates to: AVPSWGSKASCCCPPDIAWNVSK*SIEWYL
Trigger: CAGATACCATTCTATGCTCAATTTGGATACATTCCA...TGCTATATCAGGAGGACAGCAGCAACTAGCTTTTGATCCCCAACTAGGCACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR CAA 90 bp TTCTGGGAGCTCTGGGGTAATAGTTTGGTCTACAGCAGAAGTGAAAACATTGGTGCAGAAGTGAAAACATaGGTTGTGCTGGGTTTTGGT +
Preference number: 5 (lower is better)
Translates to: FWELWGNSLVYSRSENIGAEVKT*VVLGFG
Trigger: ACCAAAACCCAGCACAACCAATGTTTTCACTTCTGC...ACCAATGTTTTCACTTCTGCTGTAGACCAAACTATTACCCCAGAGCTCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR CAA 90 bp GACAATATACATATCTTCATGGGTACTACCATTTTGCAGAGGCATCATTTACTAGGAGAGTCCTGGAATTaGAGCCTGCTGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: DNIHIFMGTTILQRHHLLGESWN*SLLLLL
Trigger: CAACAGCAGCAGCAGGCTCAAATTCCAGGACTCTCC...TAGTAAATGATGCCTCTGCAAAATGGTAGTACCCATGAAGATATGTATATTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CAA 90 bp CCAATCACAACACTCATCATACATCCAATGACAATATACATATCTTCATGGGTACTTAGGCTGTCAGTCTaGTCCTTCTCTTCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: PITTLIIHPMTIYISSWVLRLSV*SFSSGS
Trigger: GCTCCCAGAAGAGAAGGACAAGACTGACAGCCTAAG...TACCCATGAAGATATGTATATTGTCATTGGATGTATGATGAGTGTTGTGATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CAA 90 bp GTTTGGTCTACAGCAGAAGTGAAAACATTGGTTGTGCTGGGTTTTGGTGAAGTTTTAGATGTTCTGTCCTaGCTCTTGAGGCATTTTGAA +
Preference number: 5 (lower is better)
Translates to: VWSTAEVKTLVVLGFGEVLDVLS*LLRHFE
Trigger: TTCAAAATGCCTCAAGAGCAAGGACAGAACATCTAA...AACTTCACCAAAACCCAGCACAACCAATGTTTTCACTTCTGCTGTAGACCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS-3UTR CAA 90 bp ATACATATCTTCATGGGTACTACCATTTTGCAGAGGCATCATTTACTAATGCAAAGTAACTCATTGCTATaGCTGGCAGACATGAGACGC +
Preference number: 5 (lower is better)
Translates to: IHIFMGTTILQRHHLLMQSNSLL*LADMRR
Trigger: GCGTCTCATGTCTGCCAGCAATAGCAATGAGTTACT...TTGCATTAGTAAATGATGCCTCTGCAAAATGGTAGTACCCATGAAGATATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CAA 90 bp ATCTTCATGGGTACTACCATTTTGCAGAGGCATCATTTACTAATGCAATTATCCTTTGTTGAGGTGACCTaGGAACTGTTTGCTGAGGTT +
Preference number: 5 (lower is better)
Translates to: IFMGTTILQRHHLLMQLSFVEVT*ELFAEV
Trigger: AACCTCAGCAAACAGTTCCAAGGTCACCTCAACAAA...GGATAATTGCATTAGTAAATGATGCCTCTGCAAAATGGTAGTACCCATGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CAA 90 bp CATCATACATCCAATGACAATATACATATCTTCATGGGTACTACCATTTTGCAGCTGCTCCTCATACTGTaGCTGTCTTGTTTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: HHTSNDNIHIFMGTTILQLLLIL*LSCLLR
Trigger: CCTCAACAAACAAGACAGCAACAGTATGAGGAGCAG...CTGCAAAATGGTAGTACCCATGAAGATATGTATATTGTCATTGGATGTATGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CAA 90 bp ATACATATCTTCATGGGTACTACCATTTTGCAGAGGCATCATTTACTAATGCAATTAAGGGTATCTGATTaGGGAGCAGTCCAGCAAACT +
Preference number: 5 (lower is better)
Translates to: IHIFMGTTILQRHHLLMQLRVSD*GAVQQT
Trigger: AGTTTGCTGGACTGCTCCCAAATCAGATACCCTTAA...TTGCATTAGTAAATGATGCCTCTGCAAAATGGTAGTACCCATGAAGATATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CAA 90 bp CCAATCACAACACTCATCATACATCCAATGACAATATACATATCTTCATGGGTACATCTGTCCTTGCTCTaGAGGCATTTTGAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: PITTLIIHPMTIYISSWVHLSLL*RHFEGE
Trigger: TTCTCCTTCAAAATGCCTCAAGAGCAAGGACAGATG...TACCCATGAAGATATGTATATTGTCATTGGATGTATGATGAGTGTTGTGATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CAA 90 bp GACAATATACATATCTTCATGGGTACTACCATTTTGCAGAGGCATCATTTACTACATACTGTTGCTGTCTaGTTTGTTGAGGTGACCTTG +
Preference number: 5 (lower is better)
Translates to: DNIHIFMGTTILQRHHLLHTVAV*FVEVTL
Trigger: CAAGGTCACCTCAACAAACAAGACAGCAACAGTATG...TAGTAAATGATGCCTCTGCAAAATGGTAGTACCCATGAAGATATGTATATTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CAA 90 bp TCCAATCACAACACTCATCATACATCCAATGACAATATACATATCTTCATGGGTGCAGAAGTGAAAACATaGGTTGTGCTGGGTTTTGGT +
Preference number: 5 (lower is better)
Translates to: SNHNTHHTSNDNIHIFMGAEVKT*VVLGFG
Trigger: ACCAAAACCCAGCACAACCAATGTTTTCACTTCTGC...ACCCATGAAGATATGTATATTGTCATTGGATGTATGATGAGTGTTGTGATTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CAA 90 bp CATCATACATCCAATGACAATATACATATCTTCATGGGTACTACCATTTTGCAGCTCTGGGGTAATAGTTaGGTCTACAGCAGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: HHTSNDNIHIFMGTTILQLWGNS*VYSRSE
Trigger: TTCACTTCTGCTGTAGACCAAACTATTACCCCAGAG...CTGCAAAATGGTAGTACCCATGAAGATATGTATATTGTCATTGGATGTATGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CAA 90 bp CATCATACATCCAATGACAATATACATATCTTCATGGGTACTACCATTTTGCAGGTATCTCTTCTCCTGTaGACATCACAGCAATTTCAG +
Preference number: 5 (lower is better)
Translates to: HHTSNDNIHIFMGTTILQVSLLL*TSQQFQ
Trigger: CTGAAATTGCTGTGATGTCAACAGGAGAAGAGATAC...CTGCAAAATGGTAGTACCCATGAAGATATGTATATTGTCATTGGATGTATGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CAA 90 bp CCAATCACAACACTCATCATACATCCAATGACAATATACATATCTTCATGGGTATTAAGAAGTAACTCATaGCTATTGCTGGCAGACATG +
Preference number: 5 (lower is better)
Translates to: PITTLIIHPMTIYISSWVLRSNS*LLLADM
Trigger: CATGTCTGCCAGCAATAGCAATGAGTTACTTCTTAA...TACCCATGAAGATATGTATATTGTCATTGGATGTATGATGAGTGTTGTGATTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CAA 90 bp CCAATCACAACACTCATCATACATCCAATGACAATATACATATCTTCATGGGTAATGGGTACTACCATTTaGCAGAGGCATCATTTACTA +
Preference number: 5 (lower is better)
Translates to: PITTLIIHPMTIYISSWVMGTTI*QRHHLL
Trigger: TAGTAAATGATGCCTCTGCAAAATGGTAGTACCCAT...TACCCATGAAGATATGTATATTGTCATTGGATGTATGATGAGTGTTGTGATTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS-3UTR CAA 90 bp GACAATATACATATCTTCATGGGTACTACCATTTTGCAGAGGCATCATTTACTATGGAATGTATCCAAATaGAGCATAGAATGGTATCTG +
Preference number: 5 (lower is better)
Translates to: DNIHIFMGTTILQRHHLLWNVSK*SIEWYL
Trigger: CAGATACCATTCTATGCTCAATTTGGATACATTCCA...TAGTAAATGATGCCTCTGCAAAATGGTAGTACCCATGAAGATATGTATATTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396094.6
CDS CCA 72 bp GATCAACTTGGCCTGCCTGGGCTCCTTGGGCAAAACTaGCCTCTCCTGTTAAGGGTATCTGATTTGGGAGCA +
Preference number: 6 (lower is better)
Translates to: DQLGLPGLLGQN*PLLLRVSDLGA
Trigger: TGCTCCCAAATCAGATACCCTTAACAGGAGAGGCCAGTTTTGCCCAAGGAGCCCAGGCAGGCCAAGTTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396094.6
ENST00000506248.1
ENST00000510709.6
ENST00000514097.5
ENST00000683306.1
CDS TCA 72 bp CCTTGGGCAAAACTGGCCTCTCCTGTTAAGGGTATCTaGTTTGGGAGCAGTCCAGCAAACTGGTCTAGAGCT +
Preference number: 6 (lower is better)
Translates to: PWAKLASPVKGI*FGSSPANWSRA
Trigger: AGCTCTAGACCAGTTTGCTGGACTGCTCCCAAATCAGATACCCTTAACAGGAGAGGCCAGTTTTGCCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396094.6
ENST00000506248.1
ENST00000510709.6
ENST00000514097.5
ENST00000683306.1
CDS GCA 72 bp GGAGCTGTGCCTAGTTGGGGATCAAAAGCTAGTTGCTaGTGTCCTCCTGATATAGCCTGCTCCTCATACTGT +
Preference number: 6 (lower is better)
Translates to: GAVPSWGSKASC*CPPDIACSSYC
Trigger: ACAGTATGAGGAGCAGGCTATATCAGGAGGACAGCAGCAACTAGCTTTTGATCCCCAACTAGGCACAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514097.5
CDS GCA 72 bp TCAGGAGCTGTGCCTAGTTGGGGATCAAAAGCTAGTTaGTGCTGTCCTCCTGATATAGCCTGCTCCTCATAC +
Preference number: 6 (lower is better)
Translates to: SGAVPSWGSKAS*CCPPDIACSSY
Trigger: GTATGAGGAGCAGGCTATATCAGGAGGACAGCAGCAACTAGCTTTTGATCCCCAACTAGGCACAGCTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514097.5
CDS CAA 90 bp GGGCTCCTTGGGCAAAACTGGCCTCTCCTGTTAAGGGTATCTGATTaGGGAGCAGTCCAGCAAACTGGTCTAGAGCTGATAAAGAGAACT +
Preference number: 6 (lower is better)
Translates to: GLLGQNWPLLLRVSD*GAVQQTGLELIKRT
Trigger: AGTTCTCTTTATCAGCTCTAGACCAGTTTGCTGGACTGCTCCCAAATCAGATACCCTTAACAGGAGAGGCCAGTTTTGCCCAAGGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396094.6
ENST00000506248.1
ENST00000510709.6
ENST00000514097.5
ENST00000683306.1
CDS CAA 72 bp GGGCAAAACTGGCCTCTCCTGTTAAGGGTATCTGATTaGGGAGCAGTCCAGCAAACTGGTCTAGAGCTGATA +
Preference number: 6 (lower is better)
Translates to: GQNWPLLLRVSD*GAVQQTGLELI
Trigger: TATCAGCTCTAGACCAGTTTGCTGGACTGCTCCCAAATCAGATACCCTTAACAGGAGAGGCCAGTTTTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396094.6
ENST00000506248.1
ENST00000510709.6
ENST00000514097.5
ENST00000683306.1
CDS TCA 72 bp GGTATTAGATGTTCTGTCCTTGCTCTTGAGGCATTTTaGAGGAGAATACATAGGGCATCACGTGACTGGGGC +
Preference number: 6 (lower is better)
Translates to: GIRCSVLALEAF*RRIHRASRDWG
Trigger: GCCCCAGTCACGTGATGCCCTATGTATTCTCCTTCAAAATGCCTCAAGAGCAAGGACAGAACATCTAATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510847.1
CDS TCA 72 bp AGAGCTGATAAAGAGAACTGGGAGAGTCCTGGAATTTaGGCCTGCTGCTGCTGTTGTAAAATTCCAGAGAAA +
Preference number: 6 (lower is better)
Translates to: RADKENWESPGI*ACCCCCKIPEK
Trigger: TTTCTCTGGAATTTTACAACAGCAGCAGCAGGCTCAAATTCCAGGACTCTCCCAGTTCTCTTTATCAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396094.6
ENST00000506248.1
ENST00000510709.6
ENST00000514097.5
ENST00000683306.1