RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OCEL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000099330

Ensembl transcript IDs: ENST00000215061.9, ENST00000594283.5, ENST00000595573.1, ENST00000595769.1, ENST00000596279.1, ENST00000597836.5, ENST00000598068.5, ENST00000598172.1, ENST00000599286.1, ENST00000599588.5, ENST00000600232.5, ENST00000600826.1, ENST00000601529.5, ENST00000601576.1, ENST00000602236.5

Found 329 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCAGGGAGCTCAGCAGGGCCTCCAGCTGCCTGAGCTTTGCCTGTaGACACCCCACCTCGTGCTGGAGCTCCAAGAACTCTCCGTACTG +
Preference number: 1 (lower is better)
Translates to: GQGAQQGLQLPELCL*TPHLVLELQELSVL
Trigger: CAGTACGGAGAGTTCTTGGAGCTCCAGCACGAGGTGGGGTGTGCACAGGCAAAGCTCAGGCAGCTGGAGGCCCTGCTGAGCTCCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598172.1
3UTR GCA 90 bp AGGGCCTCCAGCTGCCTGAGCTTTGCCTGTGCACACCCCACCTCGTaGTGGAGCTCCAAGAACTCTCCGTACTGGTCCTGGAACACTGCG +
Preference number: 1 (lower is better)
Translates to: RASSCLSFACAHPTS*WSSKNSPYWSWNTA
Trigger: CGCAGTGTTCCAGGACCAGTACGGAGAGTTCTTGGAGCTCCAGCACGAGGTGGGGTGTGCACAGGCAAAGCTCAGGCAGCTGGAGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598172.1
3UTR CCA 90 bp GCCTCCAGCTGCCTGAGCTTTGCCTGTGCACACCCCACCTCGTGCTaGAGCTCCAAGAACTCTCCGTACTGGTCCTGGAACACTGCGACA +
Preference number: 1 (lower is better)
Translates to: ASSCLSFACAHPTSC*SSKNSPYWSWNTAT
Trigger: TGTCGCAGTGTTCCAGGACCAGTACGGAGAGTTCTTGGAGCTCCAGCACGAGGTGGGGTGTGCACAGGCAAAGCTCAGGCAGCTGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598172.1
3UTR CCA 90 bp CTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTaGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGT +
Preference number: 1 (lower is better)
Translates to: LGWRAGPTSREQVEI*SPCRVRARGPRGGS
Trigger: ACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
3UTR CCA 90 bp CCTAGGCAGGGCGAGACCCGGAAGTCTTTGCAGCAGTCTGCCCTGTaGCCTTCAAGCTGCTTAACTCTCTGCCTTTCATTCTCCGAGCCT +
Preference number: 1 (lower is better)
Translates to: PRQGETRKSLQQSAL*PSSCLTLCLSFSEP
Trigger: AGGCTCGGAGAATGAAAGGCAGAGAGTTAAGCAGCTTGAAGGCCACAGGGCAGACTGCTGCAAAGACTTCCGGGTCTCGCCCTGCCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598068.5
3UTR GCA 90 bp GAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTaGCCATCTGCAGGGGCACTTAGAAGTACACGGAGCCCTCGCTGT +
Preference number: 1 (lower is better)
Translates to: EIPRNARDLHPHASL*PSAGALRSTRSPRC
Trigger: ACAGCGAGGGCTCCGTGTACTTCTAAGTGCCCCTGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
3UTR TCA 90 bp AGCCCTCGCTGTCTCCTTGGTCATCGAATTTCTGGATCTGAGTCTTaGGATGCCTCAGTTTACCCTTCAGGTAGTGGCAGCGAGCCTGCT +
Preference number: 1 (lower is better)
Translates to: SPRCLLGHRISGSES*DASVYPSGSGSEPA
Trigger: AGCAGGCTCGCTGCCACTACCTGAAGGGTAAACTGAGGCATCTCAAGACTCAGATCCAGAAATTCGATGACCAAGGAGACAGCGAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
3UTR-3UTR TCA 90 bp CTCCTTGAAACTGGGCACAGGCGACCGGGTGAGCCGGGCAAGGTGGCTCATGCCGGGCCTCCAGCTGCCTaGGCTTTGCCTGTGCACACC +
Preference number: 2 (lower is better)
Translates to: LLETGHRRPGEPGKVAHAGPPAA*ALPVHT
Trigger: GGTGTGCACAGGCAAAGCTCAGGCAGCTGGAGGCCC...GGCATGAGCCACCTTGCCCGGCTCACCCGGTCGCCTGTGCCCAGTTTCAAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598172.1
3UTR-3UTR CCA 90 bp CTCCTTGAAACTGGGCACAGGCGACCGGGTGAGCCGGGCAAGGTGGCTCATGCCGCCTCCTTCTGGCTTTaGGGTGGGGGCAGGGAGCTC +
Preference number: 2 (lower is better)
Translates to: LLETGHRRPGEPGKVAHAASFWL*GGGREL
Trigger: GAGCTCCCTGCCCCCACCCCAAAGCCAGAAGGAGGC...GGCATGAGCCACCTTGCCCGGCTCACCCGGTCGCCTGTGCCCAGTTTCAAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598172.1
3UTR-3UTR CCA 90 bp CTCCTTGAAACTGGGCACAGGCGACCGGGTGAGCCGGGCAAGGTGGCTCATGCCACCCGGGCTGCAACTTaGGCCTCCTTCTGGCTTTGG +
Preference number: 2 (lower is better)
Translates to: LLETGHRRPGEPGKVAHATRAAT*ASFWLW
Trigger: CCAAAGCCAGAAGGAGGCCCAAGTTGCAGCCCGGGT...GGCATGAGCCACCTTGCCCGGCTCACCCGGTCGCCTGTGCCCAGTTTCAAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598172.1
3UTR-3UTR CCA 90 bp CAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCAGGGGCCTGGAAGGCCTTCCTaGAGGAGGGGCTGTCAGAGC +
Preference number: 2 (lower is better)
Translates to: QEMQGTCIPMHPSAHLQGPGRPS*RRGCQS
Trigger: GCTCTGACAGCCCCTCCTCCAGGAAGGCCTTCCAGG...CCCCTGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
3UTR-3UTR CCA 90 bp CTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCCCTGGAAGGCCTTCCTaGAGGAGGGGCTGTCAGAGC +
Preference number: 2 (lower is better)
Translates to: LGWRAGPTSREQVEIWSPPGRPS*RRGCQS
Trigger: GCTCTGACAGCCCCTCCTCCAGGAAGGCCTTCCAGG...GGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000601529.5
3UTR-3UTR CCA 90 bp TGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTCCTGGAAGGCCTTCCTaGAGGAGGGGCTGTCAGAGC +
Preference number: 2 (lower is better)
Translates to: WDGEQALLPGNRLRSGVPPGRPS*RRGCQS
Trigger: GCTCTGACAGCCCCTCCTCCAGGAAGGCCTTCCAGG...AGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000601529.5
3UTR-3UTR TCA 90 bp TTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGCACAGGCGACCGGGTaGGCCGGGCAAGGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: LFHWDGEQALLPGNRLRSAQATG*AGQGGS
Trigger: TGAGCCACCTTGCCCGGCTCACCCGGTCGCCTGTGC...AGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598068.5
3UTR-3UTR GCA 90 bp GCCCATCTGCAGGGGCACTTAGAAGTACACGGAGCCCTCGCTGTCTCCTTGGTCGTCTTTGCAGCAGTCTaGCCTGTGGCCTTCAAGCTG +
Preference number: 2 (lower is better)
Translates to: AHLQGHLEVHGALAVSLVVFAAV*PVAFKL
Trigger: CAGCTTGAAGGCCACAGGGCAGACTGCTGCAAAGAC...GACCAAGGAGACAGCGAGGGCTCCGTGTACTTCTAAGTGCCCCTGCAGATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598068.5
3UTR-3UTR CCA 90 bp AGGTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTAATCCCAGCAGTCTaGGAGGCCGAGGTGGGCGGA +
Preference number: 2 (lower is better)
Translates to: RLRSGVPVGSELEDPEEEVIPAV*EAEVGG
Trigger: TCCGCCCACCTCGGCCTCCCAGACTGCTGGGATTAC...TTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598068.5
3UTR-3UTR GCA 90 bp CTTGAGATGCCTCAGTTTACCCTTCAGGTAGTGGCAGCGAGCCTGCTTGTCCAGAGACCCGGAAGTCTTTaGAGCAGTCTGCCCTGTGGC +
Preference number: 2 (lower is better)
Translates to: LEMPQFTLQVVAASLLVQRPGSL*SSLPCG
Trigger: GCCACAGGGCAGACTGCTGCAAAGACTTCCGGGTCT...CTGGACAAGCAGGCTCGCTGCCACTACCTGAAGGGTAAACTGAGGCATCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598068.5
3UTR-3UTR CCA 90 bp CTGGGTGACAGAGCGAGATTCATTCGCTTCATCTCAAACTCCCTCCAAACCCGGCACCCCACCTCGTGCTaGAGCTCCAAGAACTCTCCG +
Preference number: 2 (lower is better)
Translates to: LGDRARFIRFISNSLQTRHPTSC*SSKNSP
Trigger: CGGAGAGTTCTTGGAGCTCCAGCACGAGGTGGGGTG...CCGGGTTTGGAGGGAGTTTGAGATGAAGCGAATGAATCTCGCTCTGTCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598172.1
3UTR-3UTR TCA 90 bp GCCCATCTGCAGGGGCACTTAGAAGTACACGGAGCCCTCGCTGTCTCCTTGGTCTCTGGATCTGAGTCTTaGGATGCCTCAGTTTACCCT +
Preference number: 2 (lower is better)
Translates to: AHLQGHLEVHGALAVSLVSGSES*DASVYP
Trigger: AGGGTAAACTGAGGCATCTCAAGACTCAGATCCAGA...GACCAAGGAGACAGCGAGGGCTCCGTGTACTTCTAAGTGCCCCTGCAGATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
3UTR-3UTR GCA 90 bp AGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGGTCGAAATGCAAGGGACCTaGATCCCCATGCATCCCTCT +
Preference number: 2 (lower is better)
Translates to: RAGPTSREQVEIWSPCRVEMQGT*IPMHPS
Trigger: AGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTC...GACCCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000601529.5
3UTR-3UTR CCA 90 bp AAACTGAAGAGGCATTTGCAATCCAGGAGAAAGCGACCCCTGGTAGGGGGAGCTCAGAGGAGGAAGTCCTaGAAGGCCTTCCTGGAGGAG +
Preference number: 2 (lower is better)
Translates to: KLKRHLQSRRKRPLVGGAQRRKS*KAFLEE
Trigger: CTCCTCCAGGAAGGCCTTCCAGGACTTCCTCCTCTG...AGCTCCCCCTACCAGGGGTCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
3UTR-3UTR GCA 90 bp TTTCTGGATCTGAGTCTTGAGATGCCTCAGTTTACCCTTCAGGTAGTGGCAGCGGGACCTGCATCCCCATaGATCCCTCTGCCCATCTGC +
Preference number: 2 (lower is better)
Translates to: FLDLSLEMPQFTLQVVAAGPASP*IPLPIC
Trigger: GCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCC...CGCTGCCACTACCTGAAGGGTAAACTGAGGCATCTCAAGACTCAGATCCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
3UTR-3UTR GCA 90 bp TTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCGGACCTGCATCCCCATaGATCCCTCTGCCCATCTGC +
Preference number: 2 (lower is better)
Translates to: FISLGWRAGPTSREQVEIGPASP*IPLPIC
Trigger: GCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCC...GATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000601529.5
3UTR-3UTR GCA 90 bp CAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCAGGGGAGAGATACCAAGAAATaGAAGGGACCTGCATCCCCA +
Preference number: 2 (lower is better)
Translates to: QEMQGTCIPMHPSAHLQGRDTKK*KGPASP
Trigger: TGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCT...CCCCTGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
3UTR-3UTR CCA 90 bp TGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGGAACAGGTTGAGATCTaGAGTCCCTGTAGGGTCAGA +
Preference number: 2 (lower is better)
Translates to: WRAGPTSREQVEIWSPCREQVEI*SPCRVR
Trigger: TCTGACCCTACAGGGACTCCAGATCTCAACCTGTTC...CCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
3UTR-3UTR CCA 90 bp GAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTCCTGAACAGGTTGAGATCTaGAGTCCCTGTAGGGTCAGA +
Preference number: 2 (lower is better)
Translates to: EIWSPCRVRARGPRGGSPEQVEI*SPCRVR
Trigger: TCTGACCCTACAGGGACTCCAGATCTCAACCTGTTC...AGGACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
3UTR-3UTR CCA 90 bp ACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGCAGAGGAGGAAGTCCTaGAAGGCCTTCCTGGAGGAG +
Preference number: 2 (lower is better)
Translates to: TCLFHWDGEQALLPGNRLQRRKS*KAFLEE
Trigger: CTCCTCCAGGAAGGCCTTCCAGGACTTCCTCCTCTG...CAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
3UTR-3UTR CCA 90 bp CCCGCCTGGGTGACAGAGCGAGATTCATTCGCTTCATCTCAAACTCCCTCCAAAAAGAACTCTCCGTACTaGTCCTGGAACACTGCGACA +
Preference number: 2 (lower is better)
Translates to: PAWVTERDSFASSQTPSKKNSPY*SWNTAT
Trigger: TGTCGCAGTGTTCCAGGACCAGTACGGAGAGTTCTT...TTTGGAGGGAGTTTGAGATGAAGCGAATGAATCTCGCTCTGTCACCCAGGCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598172.1
3UTR CAA 90 bp CATCTGCAGGGGCACTTAGAAGTACACGGAGCCCTCGCTGTCTCCTaGGTCATCGAATTTCTGGATCTGAGTCTTGAGATGCCTCAGTTT +
Preference number: 2 (lower is better)
Translates to: HLQGHLEVHGALAVS*VIEFLDLSLEMPQF
Trigger: AAACTGAGGCATCTCAAGACTCAGATCCAGAAATTCGATGACCAAGGAGACAGCGAGGGCTCCGTGTACTTCTAAGTGCCCCTGCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
3UTR-3UTR TCA 90 bp AAACTGAAGAGGCATTTGCAATCCAGGAGAAAGCGACCCCTGGTAGGGGGAGCTGAGCTGAGTCCAAACTaGAGAGGCATTTGCAATCCA +
Preference number: 2 (lower is better)
Translates to: KLKRHLQSRRKRPLVGGAELSPN*RGICNP
Trigger: TGGATTGCAAATGCCTCTTCAGTTTGGACTCAGCTC...AGCTCCCCCTACCAGGGGTCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
3UTR-3UTR GCA 90 bp ACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGGAAATGCAAGGGACCTaGATCCCCATGCATCCCTCT +
Preference number: 2 (lower is better)
Translates to: TCLFHWDGEQALLPGNRLEMQGT*IPMHPS
Trigger: AGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTC...CAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000601529.5
3UTR-3UTR GCA 90 bp TTTCTGGATCTGAGTCTTGAGATGCCTCAGTTTACCCTTCAGGTAGTGGCAGCGAGCTGCTTAACTCTCTaGCTTTCATTCTCCGAGCCT +
Preference number: 2 (lower is better)
Translates to: FLDLSLEMPQFTLQVVAASCLTL*LSFSEP
Trigger: AGGCTCGGAGAATGAAAGGCAGAGAGTTAAGCAGCT...CGCTGCCACTACCTGAAGGGTAAACTGAGGCATCTCAAGACTCAGATCCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598068.5
3UTR-3UTR TCA 90 bp ATACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTGAGCTGAGTCCAAACTaGAGAGGCATTTGCAATCCA +
Preference number: 2 (lower is better)
Translates to: IHVYFTGMESRPYFQGTGELSPN*RGICNP
Trigger: TGGATTGCAAATGCCTCTTCAGTTTGGACTCAGCTC...ACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000601529.5
3UTR GCA 72 bp CATTCGCTTCATCTCAAACTCCCTCCAAACCCGGGCTaGAACTTGGGCCTCCTTCTGGCTTTGGGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: HSLHLKLPPNPG*NLGLLLALGWG
Trigger: CCCCCACCCCAAAGCCAGAAGGAGGCCCAAGTTGCAGCCCGGGTTTGGAGGGAGTTTGAGATGAAGCGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598172.1
3UTR CCA 72 bp TGCCTGAGCTTTGCCTGTGCACACCCCACCTCGTGCTaGAGCTCCAAGAACTCTCCGTACTGGTCCTGGAAC +
Preference number: 3 (lower is better)
Translates to: CLSFACAHPTSC*SSKNSPYWSWN
Trigger: GTTCCAGGACCAGTACGGAGAGTTCTTGGAGCTCCAGCACGAGGTGGGGTGTGCACAGGCAAAGCTCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598172.1
3UTR-3UTR CAA 90 bp GCCCTCGCTGTCTCCTTGGTCATCGAATTTCTGGATCTGAGTCTTGAGATGCCTTGGCAGCGAGCCTGCTaGTCCAGGAAGCCAGGATCC +
Preference number: 3 (lower is better)
Translates to: ALAVSLVIEFLDLSLEMPWQRAC*SRKPGS
Trigger: GGATCCTGGCTTCCTGGACAAGCAGGCTCGCTGCCA...AGGCATCTCAAGACTCAGATCCAGAAATTCGATGACCAAGGAGACAGCGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
3UTR CCA 72 bp AGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTaGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGA +
Preference number: 3 (lower is better)
Translates to: RAGPTSREQVEI*SPCRVRARGPR
Trigger: TCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
3UTR-3UTR CAA 90 bp TGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGCTTCCAGGGAACAGGTaGAGATCTGGAGTCCCTGTA +
Preference number: 3 (lower is better)
Translates to: WRAGPTSREQVEIWSPCRLPGNR*RSGVPV
Trigger: TACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAG...CCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
3UTR-3UTR CAA 90 bp GAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTCCTGCCCTCGCTGTCTCCTaGGTCATCGAATTTCTGGAT +
Preference number: 3 (lower is better)
Translates to: EIWSPCRVRARGPRGGSPALAVS*VIEFLD
Trigger: ATCCAGAAATTCGATGACCAAGGAGACAGCGAGGGC...AGGACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
3UTR-3UTR CAA 90 bp GTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTCTTCCAGGGAACAGGTaGAGATCTGGAGTCCCTGTA +
Preference number: 3 (lower is better)
Translates to: VEIWSPCRVRARGPRGGSLPGNR*RSGVPV
Trigger: TACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAG...ACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
3UTR-3UTR CAA 90 bp CATCTGCAGGGGCACTTAGAAGTACACGGAGCCCTCGCTGTCTCCTTGGTCATCAAACTGAAGAGGCATTaGCAATCCAGGAGAAAGCGA +
Preference number: 3 (lower is better)
Translates to: HLQGHLEVHGALAVSLVIKLKRH*QSRRKR
Trigger: TCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGTTT...GATGACCAAGGAGACAGCGAGGGCTCCGTGTACTTCTAAGTGCCCCTGCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
3UTR-3UTR CAA 90 bp AAACTGAAGAGGCATTTGCAATCCAGGAGAAAGCGACCCCTGGTAGGGGGAGCTAAACTGAAGAGGCATTaGCAATCCAGGAGAAAGCGA +
Preference number: 3 (lower is better)
Translates to: KLKRHLQSRRKRPLVGGAKLKRH*QSRRKR
Trigger: TCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGTTT...AGCTCCCCCTACCAGGGGTCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
3UTR TCA 72 bp TGTCTCCTTGGTCATCGAATTTCTGGATCTGAGTCTTaGGATGCCTCAGTTTACCCTTCAGGTAGTGGCAGC +
Preference number: 3 (lower is better)
Translates to: CLLGHRISGSES*DASVYPSGSGS
Trigger: GCTGCCACTACCTGAAGGGTAAACTGAGGCATCTCAAGACTCAGATCCAGAAATTCGATGACCAAGGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CCA 90 bp CTCCTTGAAACTGGGCACAGGCGACCGGGTGAGCCGGGCAAGGTGGCTCATGCCTTGTGGGGTCCCGGCTaGGGCTGGCACGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: LLETGHRRPGEPGKVAHALWGPG*GWHGGR
Trigger: CCGCCCTCCGTGCCAGCCCCAGCCGGGACCCCACAA...GGCATGAGCCACCTTGCCCGGCTCACCCGGTCGCCTGTGCCCAGTTTCAAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000598172.1
CDS-3UTR TCA 90 bp CTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCCAGGGGTTTCCGGGCTaGTGGGCGGGTCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: LGWRAGPTSREQVEIWSPQGFPG*WAGPAG
Trigger: CCCCGCAGGACCCGCCCATCAGCCCGGAAACCCCTG...GGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000600232.5
ENST00000601529.5
CDS-3UTR TCA 90 bp CTGAGCTTTGCCTGTGCACACCCCACCTCGTGCTGGAGCTCCAAGAACTCTCCGGCACAGGCGACCGGGTaGGCCGGGCAAGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LSFACAHPTSCWSSKNSPAQATG*AGQGGS
Trigger: TGAGCCACCTTGCCCGGCTCACCCGGTCGCCTGTGC...CGGAGAGTTCTTGGAGCTCCAGCACGAGGTGGGGTGTGCACAGGCAAAGCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR CCA 90 bp AGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCAGGGGCATTGTGGGGTCCCGGCTaGGGCTGGCACGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: RNARDLHPHASLCPSAGALWGPG*GWHGGR
Trigger: CCGCCCTCCGTGCCAGCCCCAGCCGGGACCCCACAA...TGCCCCTGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR TCA 90 bp TGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTCAGGGGTTTCCGGGCTaGTGGGCGGGTCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: WDGEQALLPGNRLRSGVPQGFPG*WAGPAG
Trigger: CCCCGCAGGACCCGCCCATCAGCCCGGAAACCCCTG...AGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CCA 90 bp CTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTTGGGGGCTCCCGGGTaGGCATCGGCCTCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: LGWRAGPTSREQVEIWSPLGAPG*ASASGR
Trigger: TCTCCCGGAGGCCGATGCCCACCCGGGAGCCCCCAA...GGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CCA 90 bp TGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTTTGTGGGGTCCCGGCTaGGGCTGGCACGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: WDGEQALLPGNRLRSGVPLWGPG*GWHGGR
Trigger: CCGCCCTCCGTGCCAGCCCCAGCCGGGACCCCACAA...AGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CCA 90 bp AGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCAGGGGCACGGGCGGCCTGTGGGTaGACACGCGGAGAGGACACG +
Preference number: 4 (lower is better)
Translates to: RNARDLHPHASLCPSAGARAACG*TRGEDT
Trigger: CGTGTCCTCTCCGCGTGTCCACCCACAGGCCGCCCG...TGCCCCTGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597836.5
CDS-3UTR TCA 90 bp GTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTCAGGGGTTTCCGGGCTaGTGGGCGGGTCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: VEIWSPCRVRARGPRGGSQGFPG*WAGPAG
Trigger: CCCCGCAGGACCCGCCCATCAGCCCGGAAACCCCTG...ACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CCA 90 bp ATGCATCCCTCTGCCCATCTGCAGGGGCACTTAGAAGTACACGGAGCCCTCGCTGGAGCCGCGAGTCTTTaGGGGCTCCCGGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: MHPSAHLQGHLEVHGALAGAASL*GLPGGH
Trigger: ATGCCCACCCGGGAGCCCCCAAAGACTCGCGGCTCC...AGCGAGGGCTCCGTGTACTTCTAAGTGCCCCTGCAGATGGGCAGAGGGATGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CCA 90 bp GATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTATTGTGGGGTCCCGGCTaGGGCTGGCACGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: DGEQALLPGNRLRSGVPVLWGPG*GWHGGR
Trigger: CCGCCCTCCGTGCCAGCCCCAGCCGGGACCCCACAA...TACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CCA 90 bp CCTGAGCTTTGCCTGTGCACACCCCACCTCGTGCTGGAGCTCCAAGAACTCTCCGCCTCCTTCTGGCTTTaGGGTGGGGGCAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PELCLCTPHLVLELQELSASFWL*GGGREL
Trigger: GAGCTCCCTGCCCCCACCCCAAAGCCAGAAGGAGGC...GGAGAGTTCTTGGAGCTCCAGCACGAGGTGGGGTGTGCACAGGCAAAGCTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR TCA 90 bp AAACTGAAGAGGCATTTGCAATCCAGGAGAAAGCGACCCCTGGTAGGGGGAGCTCAGGGGTTTCCGGGCTaGTGGGCGGGTCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: KLKRHLQSRRKRPLVGGAQGFPG*WAGPAG
Trigger: CCCCGCAGGACCCGCCCATCAGCCCGGAAACCCCTG...AGCTCCCCCTACCAGGGGTCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000601529.5
CDS-3UTR CCA 90 bp CTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCTTGGGGGCTCCCGGGTaGGCATCGGCCTCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: LRDTKKCKGPASPCIPLPLGAPG*ASASGR
Trigger: TCTCCCGGAGGCCGATGCCCACCCGGGAGCCCCCAA...GGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CCA 90 bp AAACTGAAGAGGCATTTGCAATCCAGGAGAAAGCGACCCCTGGTAGGGGGAGCTTTGTGGGGTCCCGGCTaGGGCTGGCACGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: KLKRHLQSRRKRPLVGGALWGPG*GWHGGR
Trigger: CCGCCCTCCGTGCCAGCCCCAGCCGGGACCCCACAA...AGCTCCCCCTACCAGGGGTCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CCA 90 bp ATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGTTGTGGGGTCCCGGCTaGGGCTGGCACGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: ISLGWRAGPTSREQVEIWLWGPG*GWHGGR
Trigger: CCGCCCTCCGTGCCAGCCCCAGCCGGGACCCCACAA...CCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CCA 90 bp GCATCCCTCTGCCCATCTGCAGGGGCACTTAGAAGTACACGGAGCCCTCGCTGTGCGCCCAGGAGGGCCTaGGAGAGCAACTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: ASLCPSAGALRSTRSPRCAPRRA*ESNSSS
Trigger: TGAGGATGAGTTGCTCTCCCAGGCCCTCCTGGGCGC...ACAGCGAGGGCTCCGTGTACTTCTAAGTGCCCCTGCAGATGGGCAGAGGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CCA 90 bp AGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCAGGGGCAGCCTCCTTCTGGCTTTaGGGTGGGGGCAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RNARDLHPHASLCPSAGAASFWL*GGGREL
Trigger: GAGCTCCCTGCCCCCACCCCAAAGCCAGAAGGAGGC...TGCCCCTGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
CDS-3UTR CCA 90 bp CTGAGCTTTGCCTGTGCACACCCCACCTCGTGCTGGAGCTCCAAGAACTCTCCGACTTGGGCCTCCTTCTaGCTTTGGGGTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LSFACAHPTSCWSSKNSPTWASF*LWGGGR
Trigger: CCTGCCCCCACCCCAAAGCCAGAAGGAGGCCCAAGT...CGGAGAGTTCTTGGAGCTCCAGCACGAGGTGGGGTGTGCACAGGCAAAGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR TCA 90 bp ACTGAAGAGGCATTTGCAATCCAGGAGAAAGCGACCCCTGGTAGGGGGAGCTGCCGGAGAGGACACGCCTaGCGACGCGCACGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: TEEAFAIQEKATPGRGSCRRGHA*RRARRK
Trigger: CTTTCTCCGTGCGCGTCGTCAGGCGTGTCCTCTCCG...GCAGCTCCCCCTACCAGGGGTCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597836.5
CDS-3UTR CCA 90 bp AGGTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGGAGCCGCGAGTCTTTaGGGGCTCCCGGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: RLRSGVPVGSELEDPEEEGAASL*GLPGGH
Trigger: ATGCCCACCCGGGAGCCCCCAAAGACTCGCGGCTCC...TTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CCA 90 bp CAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCAGGGGGCGCCCAGGAGGGCCTaGGAGAGCAACTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: QEMQGTCIPMHPSAHLQGAPRRA*ESNSSS
Trigger: TGAGGATGAGTTGCTCTCCCAGGCCCTCCTGGGCGC...CCCCTGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CCA 90 bp CTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCGCGCCCAGGAGGGCCTaGGAGAGCAACTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: LGWRAGPTSREQVEIWSPAPRRA*ESNSSS
Trigger: TGAGGATGAGTTGCTCTCCCAGGCCCTCCTGGGCGC...GGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CCA 90 bp CTGCCTGAGCTTTGCCTGTGCACACCCCACCTCGTGCTGGAGCTCCAAGAACTCCACCCCACCTCGTGCTaGAGCTCCAAGAACTCTCCG +
Preference number: 4 (lower is better)
Translates to: LPELCLCTPHLVLELQELHPTSC*SSKNSP
Trigger: CGGAGAGTTCTTGGAGCTCCAGCACGAGGTGGGGTG...GAGTTCTTGGAGCTCCAGCACGAGGTGGGGTGTGCACAGGCAAAGCTCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR CCA 90 bp GCACACCCCACCTCGTGCTGGAGCTCCAAGAACTCTCCGTACTGGTCCTGGAACACCCGGGCTGCAACTTaGGCCTCCTTCTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: AHPTSCWSSKNSPYWSWNTRAAT*ASFWLW
Trigger: CCAAAGCCAGAAGGAGGCCCAAGTTGCAGCCCGGGT...GTTCCAGGACCAGTACGGAGAGTTCTTGGAGCTCCAGCACGAGGTGGGGTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR CCA 90 bp AGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCAGGGGCACCTGGAAGGCCTTCCTaGAGGAGGGGCTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: RNARDLHPHASLCPSAGAPGRPS*RRGCQS
Trigger: GCTCTGACAGCCCCTCCTCCAGGAAGGCCTTCCAGG...TGCCCCTGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CCA 90 bp TGCCTGAGCTTTGCCTGTGCACACCCCACCTCGTGCTGGAGCTCCAAGAACTCTGTAATCCCAGCAGTCTaGGAGGCCGAGGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: CLSFACAHPTSCWSSKNSVIPAV*EAEVGG
Trigger: TCCGCCCACCTCGGCCTCCCAGACTGCTGGGATTAC...AGAGTTCTTGGAGCTCCAGCACGAGGTGGGGTGTGCACAGGCAAAGCTCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR GCA 90 bp GCACACCCCACCTCGTGCTGGAGCTCCAAGAACTCTCCGTACTGGTCCTGGAACCTGGTCCTGGAACACTaGGACATAGCGGCTCCGTTC +
Preference number: 4 (lower is better)
Translates to: AHPTSCWSSKNSPYWSWNLVLEH*DIAAPF
Trigger: GAACGGAGCCGCTATGTCGCAGTGTTCCAGGACCAG...GTTCCAGGACCAGTACGGAGAGTTCTTGGAGCTCCAGCACGAGGTGGGGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR GCA 90 bp CAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCAGGGGCCTCCAAACCCGGGCTaGAACTTGGGCCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: QEMQGTCIPMHPSAHLQGPPNPG*NLGLLL
Trigger: CAGAAGGAGGCCCAAGTTGCAGCCCGGGTTTGGAGG...CCCCTGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
CDS-3UTR GCA 90 bp CTCTGCCCATCTGCAGGGGCACTTAGAAGTACACGGAGCCCTCGCTGTCTCCTTCCTCCAAACCCGGGCTaGAACTTGGGCCTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: LCPSAGALRSTRSPRCLLPPNPG*NLGLLS
Trigger: GCTAAGGAGGCCCAAGTTGCAGCCCGGGTTTGGAGG...AAGGAGACAGCGAGGGCTCCGTGTACTTCTAAGTGCCCCTGCAGATGGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601529.5
CDS-3UTR CCA 90 bp AAACTGAAGAGGCATTTGCAATCCAGGAGAAAGCGACCCCTGGTAGGGGGAGCTGGAGCCGCGAGTCTTTaGGGGCTCCCGGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: KLKRHLQSRRKRPLVGGAGAASL*GLPGGH
Trigger: ATGCCCACCCGGGAGCCCCCAAAGACTCGCGGCTCC...AGCTCCCCCTACCAGGGGTCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CCA 90 bp GAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGGTCAGCGCCCAGGAGGGCCTaGGAGAGCAACTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: EQALLPGNRLRSGVPVGSAPRRA*ESNSSS
Trigger: TGAGGATGAGTTGCTCTCCCAGGCCCTCCTGGGCGC...TGACCCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CCA 90 bp ATCCTAGGCAGGGCGAGACCCGGAAGTCTTTGCAGCAGTCTGCCCTGTGGCCTTCTCATAGTCGGGCACTaGGTGGGGCCTAGGCTTATG +
Preference number: 4 (lower is better)
Translates to: ILGRARPGSLCSSLPCGLLIVGH*VGPRLM
Trigger: CATAAGCCTAGGCCCCACCCAGTGCCCGACTATGAG...AAGGCCACAGGGCAGACTGCTGCAAAGACTTCCGGGTCTCGCCCTGCCTAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598068.5
CDS-3UTR CCA 90 bp GATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGCCTCCTTCTGGCTTTaGGGTGGGGGCAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: DGEQALLPGNRLRSGVPVASFWL*GGGREL
Trigger: GAGCTCCCTGCCCCCACCCCAAAGCCAGAAGGAGGC...TACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
CDS-3UTR CCA 90 bp ACTGAAGAGGCATTTGCAATCCAGGAGAAAGCGACCCCTGGTAGGGGGAGCTGCACTTGGGCCTCCTTCTaGCTTTGGGGTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TEEAFAIQEKATPGRGSCTWASF*LWGGGR
Trigger: CCTGCCCCCACCCCAAAGCCAGAAGGAGGCCCAAGT...GCAGCTCCCCCTACCAGGGGTCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
CDS-3UTR CCA 90 bp CAGGTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAACTTGGGCCTCCTTCTaGCTTTGGGGTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QVEIWSPCRVRARGPRGGTWASF*LWGGGR
Trigger: CCTGCCCCCACCCCAAAGCCAGAAGGAGGCCCAAGT...TCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000600232.5
CDS-3UTR CCA 90 bp GGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGGACCCGGGCTGCAACTTaGGCCTCCTTCTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: GEQALLPGNRLRSGVPVGTRAAT*ASFWLW
Trigger: CCAAAGCCAGAAGGAGGCCCAAGTTGCAGCCCGGGT...CCCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
CDS-3UTR CCA 90 bp AGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGGTCCCTGGAAGGCCTTCCTaGAGGAGGGGCTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: RAGPTSREQVEIWSPCRVPGRPS*RRGCQS
Trigger: GCTCTGACAGCCCCTCCTCCAGGAAGGCCTTCCAGG...GACCCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR CCA 90 bp GGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTCCTGGAAGGCCTTCCTaGAGGAGGGGCTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: GWRAGPTSREQVEIWSPCPGRPS*RRGCQS
Trigger: GCTCTGACAGCCCCTCCTCCAGGAAGGCCTTCCAGG...ACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR CCA 90 bp ATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCATCTGCGGGCGGCCTGTaGGTGGACACGCGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: IPRNARDLHPHASLCPSASAGGL*VDTRRG
Trigger: TCCTCTCCGCGTGTCCACCCACAGGCCGCCCGCAGA...TGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597836.5
CDS-3UTR TCA 90 bp GAAAAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTGCACAGGCGACCGGGTaGGCCGGGCAAGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: EKLRDTKKCKGPASPCIPAQATG*AGQGGS
Trigger: TGAGCCACCTTGCCCGGCTCACCCGGTCGCCTGTGC...AGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598068.5
CDS-3UTR GCA 90 bp ACTGAAGAGGCATTTGCAATCCAGGAGAAAGCGACCCCTGGTAGGGGGAGCTGCCCTGAGCTTTGCCTGTaGACACCCCACCTCGTGCTG +
Preference number: 4 (lower is better)
Translates to: TEEAFAIQEKATPGRGSCPELCL*TPHLVL
Trigger: CAGCACGAGGTGGGGTGTGCACAGGCAAAGCTCAGG...GCAGCTCCCCCTACCAGGGGTCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
CDS-3UTR GCA 90 bp ACTGAAGAGGCATTTGCAATCCAGGAGAAAGCGACCCCTGGTAGGGGGAGCTGCCAGCTGCCTGAGCTTTaGCTGTGCACACCCCACCTC +
Preference number: 4 (lower is better)
Translates to: TEEAFAIQEKATPGRGSCQLPEL*LCTPHL
Trigger: GAGGTGGGGTGTGCACAGGCAAAGCTCAGGCAGCTG...GCAGCTCCCCCTACCAGGGGTCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
CDS-3UTR GCA 90 bp CGTGCTGGAGCTCCAAGAACTCTCCGTACTGGTCCTGGAACACTGCGACATAGCCAGCTGCCTGAGCTTTaGCTGTGCACACCCCACCTC +
Preference number: 4 (lower is better)
Translates to: RAGAPRTLRTGPGTLRHSQLPEL*LCTPHL
Trigger: GAGGTGGGGTGTGCACAGGCAAAGCTCAGGCAGCTG...GCTATGTCGCAGTGTTCCAGGACCAGTACGGAGAGTTCTTGGAGCTCCAGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR GCA 90 bp CAGTTTACCCTTCAGGTAGTGGCAGCGAGCCTGCTTGTCCAGGAAGCCAGGATCCCTCCAAACCCGGGCTaGAACTTGGGCCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: QFTLQVVAASLLVQEARIPPNPG*NLGLLL
Trigger: CAGAAGGAGGCCCAAGTTGCAGCCCGGGTTTGGAGG...GATCCTGGCTTCCTGGACAAGCAGGCTCGCTGCCACTACCTGAAGGGTAAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598068.5
CDS-3UTR GCA 90 bp TGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGCCCCATGCATCCCTCTaGCCATCTGCAGGGGCACTT +
Preference number: 4 (lower is better)
Translates to: WRAGPTSREQVEIWSPCRPHASL*PSAGAL
Trigger: AAGTGCCCCTGCAGATGGGCAGAGGGATGCATGGGG...CCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000601529.5
CDS-3UTR GCA 90 bp CTGCAGGGGCACTTAGAAGTACACGGAGCCCTCGCTGTCTCCTTGGTCATCGAAGGACCTGCATCCCCATaGATCCCTCTGCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: LQGHLEVHGALAVSLVIEGPASP*IPLPIC
Trigger: GCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCC...TTCGATGACCAAGGAGACAGCGAGGGCTCCGTGTACTTCTAAGTGCCCCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
CDS-3UTR GCA 90 bp CTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCGGACCTGCATCCCCATaGATCCCTCTGCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LGWRAGPTSREQVEIWSPGPASP*IPLLVQ
Trigger: CTGGACAAGCAGAGGGATGCATGGGGATGCAGGTCC...GGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600826.1
CDS-3UTR CCA 90 bp GATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCCTGGAGCTCCGAGCCTaGATCTGCTGTCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: DTKKCKGPASPCIPLPICLELRA*ICCRRG
Trigger: GCCTCTCCGACAGCAGATCCAGGCTCGGAGCTCCAG...GCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215061.9
ENST00000601529.5
CDS-3UTR CCA 90 bp GATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTACTGGAGCTCCGAGCCTaGATCTGCTGTCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: DGEQALLPGNRLRSGVPVLELRA*ICCRRG
Trigger: GCCTCTCCGACAGCAGATCCAGGCTCGGAGCTCCAG...TACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CCA 90 bp GGAAAAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCGGAGCCGCGAGTCTTTaGGGGCTCCCGGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: GKAERYQEMQGTCIPMHPGAASL*GLPGGH
Trigger: ATGCCCACCCGGGAGCCCCCAAAGACTCGCGGCTCC...GGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CCA 90 bp TTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTCGCGCCCAGGAGGGCCTaGGAGAGCAACTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: LRSGVPVGSELEDPEEEVAPRRA*ESNSSS
Trigger: TGAGGATGAGTTGCTCTCCCAGGCCCTCCTGGGCGC...GACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CCA 90 bp TTCATTCGCTTCATCTCAAACTCCCTCCAAACCCGGGCTGCAACTTGGGCCTCCGCGCCCAGGAGGGCCTaGGAGAGCAACTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: FIRFISNSLQTRAATWASAPRRA*ESNSSS
Trigger: TGAGGATGAGTTGCTCTCCCAGGCCCTCCTGGGCGC...GGAGGCCCAAGTTGCAGCCCGGGTTTGGAGGGAGTTTGAGATGAAGCGAATGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR CCA 90 bp AGGTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAACTTGGGCCTCCTTCTaGCTTTGGGGTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RLRSGVPVGSELEDPEEETWASF*LWGGGR
Trigger: CCTGCCCCCACCCCAAAGCCAGAAGGAGGCCCAAGT...TTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000600232.5
CDS-3UTR CCA 90 bp GAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTCCTACCCGGGCTGCAACTTaGGCCTCCTTCTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: EIWSPCRVRARGPRGGSPTRAAT*ASFWLW
Trigger: CCAAAGCCAGAAGGAGGCCCAAGTTGCAGCCCGGGT...AGGACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000600232.5
CDS-3UTR CCA 90 bp CTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCCCTGGAAGGCCTTCCTaGAGGAGGGGCTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LRDTKKCKGPASPCIPLPPGRPS*RRGCQS
Trigger: GCTCTGACAGCCCCTCCTCCAGGAAGGCCTTCCAGG...GGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CCA 90 bp TTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTCCCTGGAAGGCCTTCCTaGAGGAGGGGCTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LRSGVPVGSELEDPEEEVPGRPS*RRGCQS
Trigger: GCTCTGACAGCCCCTCCTCCAGGAAGGCCTTCCAGG...GACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR TCA 90 bp TGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGTTGAACCCGGGACGCTaGGGTTGCAGTGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: WRAGPTSREQVEIWSPCRLNPGR*GCSELR
Trigger: TCTCAGCTCACTGCAACCTCAGCGTCCCGGGTTCAA...CCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598068.5
CDS-3UTR GCA 90 bp GTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTCTCCGAGCCTGGATCTaGTGTCGGAGAGGCACTTCC +
Preference number: 4 (lower is better)
Translates to: VEIWSPCRVRARGPRGGSLRAWI*CRRGTS
Trigger: GGAAGTGCCTCTCCGACAGCAGATCCAGGCTCGGAG...ACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000600232.5
ENST00000601529.5
CDS-3UTR GCA 90 bp GGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTCTGGTCCTGGAACACTaGGACATAGCGGCTCCGTTC +
Preference number: 4 (lower is better)
Translates to: GWRAGPTSREQVEIWSPCLVLEH*DIAAPF
Trigger: GAACGGAGCCGCTATGTCGCAGTGTTCCAGGACCAG...ACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
CDS-3UTR GCA 90 bp TTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTCCCTGAGCTTTGCCTGTaGACACCCCACCTCGTGCTG +
Preference number: 4 (lower is better)
Translates to: LRSGVPVGSELEDPEEEVPELCL*TPHLVL
Trigger: CAGCACGAGGTGGGGTGTGCACAGGCAAAGCTCAGG...GACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000600232.5
CDS-3UTR GCA 90 bp GTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTCCTCCAAACCCGGGCTaGAACTTGGGCCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: VEIWSPCRVRARGPRGGSPPNPG*NLGLLL
Trigger: CAGAAGGAGGCCCAAGTTGCAGCCCGGGTTTGGAGG...ACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000600232.5
CDS-3UTR GCA 90 bp CATTCGCTTCATCTCAAACTCCCTCCAAACCCGGGCTGCAACTTGGGCCTCCTTCCTCCAAACCCGGGCTaGAACTTGGGCCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: HSLHLKLPPNPGCNLGLLPPNPG*NLGLLL
Trigger: CAGAAGGAGGCCCAAGTTGCAGCCCGGGTTTGGAGG...AAGGAGGCCCAAGTTGCAGCCCGGGTTTGGAGGGAGTTTGAGATGAAGCGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR GCA 90 bp AAAGCGACCCCTGGTAGGGGGAGCATTCGCTTCATCTCAAACTCCCTCCAAACCCCTCCAAACCCGGGCTaGAACTTGGGCCTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: KATPGRGSIRFISNSLQTPPNPG*NLGLLS
Trigger: GCTAAGGAGGCCCAAGTTGCAGCCCGGGTTTGGAGG...GGTTTGGAGGGAGTTTGAGATGAAGCGAATGCTCCCCCTACCAGGGGTCGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599286.1
CDS-3UTR GCA 90 bp CACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCCCATGCATCCCTCTaGTTGTCCAGGAAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: HWDGEQALLPGNRLRSGVPHASL*LSRKPG
Trigger: TCCTGGCTTCCTGGACAAGCAGAGGGATGCATGGGG...GACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600826.1
CDS-3UTR GCA 90 bp CATCCCCATGCATCCCTCTGCCCATCTGCAGGGGCACTTAGAAGTACACGGAGCGTCTTTGCAGCAGTCTaGCCTGTGGCCTTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: HPHASLCPSAGALRSTRSVFAAV*PVAFKL
Trigger: CAGCTTGAAGGCCACAGGGCAGACTGCTGCAAAGAC...GCTCCGTGTACTTCTAAGTGCCCCTGCAGATGGGCAGAGGGATGCATGGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598068.5
CDS-3UTR GCA 90 bp ACTGAAGAGGCATTTGCAATCCAGGAGAAAGCGACCCCTGGTAGGGGGAGCTGCAGACCCGGAAGTCTTTaGAGCAGTCTGCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TEEAFAIQEKATPGRGSCRPGSL*SSLPCG
Trigger: GCCACAGGGCAGACTGCTGCAAAGACTTCCGGGTCT...GCAGCTCCCCCTACCAGGGGTCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598068.5
CDS-3UTR CCA 90 bp CAGGTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGACTCATAGTCGGGCACTaGGTGGGGCCTAGGCTTATG +
Preference number: 4 (lower is better)
Translates to: QVEIWSPCRVRARGPRGGLIVGH*VGPRLM
Trigger: CATAAGCCTAGGCCCCACCCAGTGCCCGACTATGAG...TCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CCA 90 bp CGTGCTGGAGCTCCAAGAACTCTCCGTACTGGTCCTGGAACACTGCGACATAGCCTCATAGTCGGGCACTaGGTGGGGCCTAGGCTTATG +
Preference number: 4 (lower is better)
Translates to: RAGAPRTLRTGPGTLRHSLIVGH*VGPRLM
Trigger: CATAAGCCTAGGCCCCACCCAGTGCCCGACTATGAG...GCTATGTCGCAGTGTTCCAGGACCAGTACGGAGAGTTCTTGGAGCTCCAGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR CCA 90 bp AAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGGCCTCCTTCTGGCTTTaGGGTGGGGGCAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: KLRDTKKCKGPASPCIPLASFWL*GGGREL
Trigger: GAGCTCCCTGCCCCCACCCCAAAGCCAGAAGGAGGC...CAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
CDS-3UTR CCA 90 bp ACTGAAGAGGCATTTGCAATCCAGGAGAAAGCGACCCCTGGTAGGGGGAGCATTCCTGGAAGGCCTTCCTaGAGGAGGGGCTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: TEEAFAIQEKATPGRGSIPGRPS*RRGCQS
Trigger: GCTCTGACAGCCCCTCCTCCAGGAAGGCCTTCCAGG...AATGCTCCCCCTACCAGGGGTCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599286.1
CDS-3UTR CCA 90 bp AAACTGAAGAGGCATTTGCAATCCAGGAGAAAGCGACCCCTGGTAGGGGGAGCTCCTGGAAGGCCTTCCTaGAGGAGGGGCTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: KLKRHLQSRRKRPLVGGAPGRPS*RRGCQS
Trigger: GCTCTGACAGCCCCTCCTCCAGGAAGGCCTTCCAGG...AGCTCCCCCTACCAGGGGTCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CCA 90 bp CATCTGCAGGGGCACTTAGAAGTACACGGAGCCCTCGCTGTCTCCTTGGTCATCCAGAGGAGGAAGTCCTaGAAGGCCTTCCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: HLQGHLEVHGALAVSLVIQRRKS*KAFLEE
Trigger: CTCCTCCAGGAAGGCCTTCCAGGACTTCCTCCTCTG...GATGACCAAGGAGACAGCGAGGGCTCCGTGTACTTCTAAGTGCCCCTGCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CCA 90 bp AGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGGTCCAGAGGAGGAAGTCCTaGAAGGCCTTCCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RAGPTSREQVEIWSPCRVQRRKS*KAFLEE
Trigger: CTCCTCCAGGAAGGCCTTCCAGGACTTCCTCCTCTG...GACCCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR TCA 90 bp GAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGGTCAAGGGGCTGTCAGAGCTaGGTCCAAACTGAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: EQALLPGNRLRSGVPVGSRGCQS*VQTEEA
Trigger: TGCCTCTTCAGTTTGGACTCAGCTCTGACAGCCCCT...TGACCCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR TCA 90 bp GGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGGGCTGTCAGAGCTaGGTCCAAACTGAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: GWRAGPTSREQVEIWSPCRGCQS*VQTEEA
Trigger: TGCCTCTTCAGTTTGGACTCAGCTCTGACAGCCCCT...ACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR TCA 90 bp CATTCGCTTCATCTCAAACTCCCTCCAAACCCGGGCTGCAACTTGGGCCTCCTTTTGAACCCGGGACGCTaGGGTTGCAGTGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: HSLHLKLPPNPGCNLGLLLNPGR*GCSELR
Trigger: TCTCAGCTCACTGCAACCTCAGCGTCCCGGGTTCAA...AAGGAGGCCCAAGTTGCAGCCCGGGTTTGGAGGGAGTTTGAGATGAAGCGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR TCA 90 bp CCCGCCTGGGTGACAGAGCGAGATTCATTCGCTTCATCTCAAACTCCCTCCAAAGCACTCCCGCCTGGGTaGCAGAGCGAGATTCATTCG +
Preference number: 4 (lower is better)
Translates to: PAWVTERDSFASSQTPSKALPPG*QSEIHS
Trigger: CGAATGAATCTCGCTCTGTCACCCAGGCGGGAGTGC...TTTGGAGGGAGTTTGAGATGAAGCGAATGAATCTCGCTCTGTCACCCAGGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR GCA 90 bp ATGCATCCCTCTGCCCATCTGCAGGGGCACTTAGAAGTACACGGAGCCCTCGCTCTTCCGTCCGGGTTGTaGATTTACTGCAGGATGGAC +
Preference number: 4 (lower is better)
Translates to: MHPSAHLQGHLEVHGALALPSGL*IYCRMD
Trigger: GTCCATCCTGCAGTAAATGCACAACCCGGACGGAAG...AGCGAGGGCTCCGTGTACTTCTAAGTGCCCCTGCAGATGGGCAGAGGGATGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601529.5
CDS-3UTR GCA 90 bp CAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCAGGGGAATCTTCTTGGTCTTTaGCTTGTGGGGTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: QEMQGTCIPMHPSAHLQGNLLGL*LVGSRL
Trigger: CAGCCGGGACCCCACAAGGCAAAGACCAAGAAGATT...CCCCTGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR GCA 90 bp TCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTTGGGGCCTAGGCTTATaGCCCTTAGGGATGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SLGWRAGPTSREQVEIWSWGLGL*PLGMAP
Trigger: TGGAGCCATCCCTAAGGGGCATAAGCCTAGGCCCCA...ACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR GCA 90 bp CATTCGCTTCATCTCAAACTCCCTCCAAACCCGGGCTGCAACTTGGGCCTCCTTTGGGGCCTAGGCTTATaGCCCTTAGGGATGGCTCCA +
Preference number: 4 (lower is better)
Translates to: HSLHLKLPPNPGCNLGLLWGLGL*PLGMAP
Trigger: TGGAGCCATCCCTAAGGGGCATAAGCCTAGGCCCCA...AAGGAGGCCCAAGTTGCAGCCCGGGTTTGGAGGGAGTTTGAGATGAAGCGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR GCA 90 bp TTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTCTGGGGCCTAGGCTTATaGCCCTTAGGGATGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LRSGVPVGSELEDPEEEVWGLGL*PLGMAP
Trigger: TGGAGCCATCCCTAAGGGGCATAAGCCTAGGCCCCA...GACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR GCA 90 bp CTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCCTGGTCCTGGAACACTaGGACATAGCGGCTCCGTTC +
Preference number: 4 (lower is better)
Translates to: LRDTKKCKGPASPCIPLPLVLEH*DIAAPF
Trigger: GAACGGAGCCGCTATGTCGCAGTGTTCCAGGACCAG...GGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
CDS-3UTR GCA 90 bp GTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTCTGGTCCTGGAACACTaGGACATAGCGGCTCCGTTC +
Preference number: 4 (lower is better)
Translates to: VEIWSPCRVRARGPRGGSLVLEH*DIAAPF
Trigger: GAACGGAGCCGCTATGTCGCAGTGTTCCAGGACCAG...ACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000600232.5
CDS-3UTR GCA 90 bp CCCGCCTGGGTGACAGAGCGAGATTCATTCGCTTCATCTCAAACTCCCTCCAAACCTGAGCTTTGCCTGTaGACACCCCACCTCGTGCTG +
Preference number: 4 (lower is better)
Translates to: PAWVTERDSFASSQTPSKPELCL*TPHLVL
Trigger: CAGCACGAGGTGGGGTGTGCACAGGCAAAGCTCAGG...TTTGGAGGGAGTTTGAGATGAAGCGAATGAATCTCGCTCTGTCACCCAGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR GCA 90 bp ATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGCCCCATGCATCCCTCTaGCCATCTGCAGGGGCACTT +
Preference number: 4 (lower is better)
Translates to: ISLGWRAGPTSREQVEIWPHASL*PSAGAL
Trigger: AAGTGCCCCTGCAGATGGGCAGAGGGATGCATGGGG...CCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CCA 90 bp AAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGGCGCCCAGGAGGGCCTaGGAGAGCAACTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: KLRDTKKCKGPASPCIPLAPRRA*ESNSSS
Trigger: TGAGGATGAGTTGCTCTCCCAGGCCCTCCTGGGCGC...CAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CCA 90 bp GTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTCTCATAGTCGGGCACTaGGTGGGGCCTAGGCTTATG +
Preference number: 4 (lower is better)
Translates to: VEIWSPCRVRARGPRGGSLIVGH*VGPRLM
Trigger: CATAAGCCTAGGCCCCACCCAGTGCCCGACTATGAG...ACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CCA 90 bp GCAAGAGGAAAAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGGCCTCCTTCTGGCTTTaGGGTGGGGGCAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: ARGKAERYQEMQGTCIPMASFWL*GGGREL
Trigger: GAGCTCCCTGCCCCCACCCCAAAGCCAGAAGGAGGC...CATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTTTTCCTCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
CDS-3UTR CCA 90 bp GTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTCAGAGGAGGAAGTCCTaGAAGGCCTTCCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: VEIWSPCRVRARGPRGGSQRRKS*KAFLEE
Trigger: CTCCTCCAGGAAGGCCTTCCAGGACTTCCTCCTCTG...ACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR CCA 90 bp TCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCAGAGGAGGAAGTCCTaGAAGGCCTTCCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SLGWRAGPTSREQVEIWSQRRKS*KAFLEE
Trigger: CTCCTCCAGGAAGGCCTTCCAGGACTTCCTCCTCTG...ACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR TCA 90 bp AATACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGGGGCCTCCAGCTGCCTaGGCTTTGCCTGTGCACACC +
Preference number: 4 (lower is better)
Translates to: NTCLFHWDGEQALLPGNRGPPAA*ALPVHT
Trigger: GGTGTGCACAGGCAAAGCTCAGGCAGCTGGAGGCCC...CCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
CDS-3UTR TCA 90 bp GCCCATCTGCAGGGGCACTTAGAAGTACACGGAGCCCTCGCTGTCTCCTTGGTCGAGCTGAGTCCAAACTaGAGAGGCATTTGCAATCCA +
Preference number: 4 (lower is better)
Translates to: AHLQGHLEVHGALAVSLVELSPN*RGICNP
Trigger: TGGATTGCAAATGCCTCTTCAGTTTGGACTCAGCTC...GACCAAGGAGACAGCGAGGGCTCCGTGTACTTCTAAGTGCCCCTGCAGATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
CDS-3UTR TCA 90 bp CTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCAGGGGCTGTCAGAGCTaGGTCCAAACTGAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LRDTKKCKGPASPCIPLPRGCQS*VQTEEA
Trigger: TGCCTCTTCAGTTTGGACTCAGCTCTGACAGCCCCT...GGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR TCA 90 bp GATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAAGGGGCTGTCAGAGCTaGGTCCAAACTGAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: DGEQALLPGNRLRSGVPVRGCQS*VQTEEA
Trigger: TGCCTCTTCAGTTTGGACTCAGCTCTGACAGCCCCT...TACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR TCA 90 bp AACAGGTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGAGGGGCTGTCAGAGCTaGGTCCAAACTGAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: NRLRSGVPVGSELEDPEERGCQS*VQTEEA
Trigger: TGCCTCTTCAGTTTGGACTCAGCTCTGACAGCCCCT...CTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAACCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR GCA 90 bp AAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCTCCGAGCCTGGATCTaGTGTCGGAGAGGCACTTCC +
Preference number: 4 (lower is better)
Translates to: KLRDTKKCKGPASPCIPLLRAWI*CRRGTS
Trigger: GGAAGTGCCTCTCCGACAGCAGATCCAGGCTCGGAG...CAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215061.9
ENST00000601529.5
CDS-3UTR GCA 90 bp ACTGAAGAGGCATTTGCAATCCAGGAGAAAGCGACCCCTGGTAGGGGGAGCTGCAATCTTCTTGGTCTTTaGCTTGTGGGGTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: TEEAFAIQEKATPGRGSCNLLGL*LVGSRL
Trigger: CAGCCGGGACCCCACAAGGCAAAGACCAAGAAGATT...GCAGCTCCCCCTACCAGGGGTCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR GCA 90 bp ATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCATGGGGCCTAGGCTTATaGCCCTTAGGGATGGCTCCA +
Preference number: 4 (lower is better)
Translates to: IPRNARDLHPHASLCPSAWGLGL*PLGMAP
Trigger: TGGAGCCATCCCTAAGGGGCATAAGCCTAGGCCCCA...TGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR GCA 90 bp ATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCACTGGTCCTGGAACACTaGGACATAGCGGCTCCGTTC +
Preference number: 4 (lower is better)
Translates to: IPRNARDLHPHASLCPSALVLEH*DIAAPF
Trigger: GAACGGAGCCGCTATGTCGCAGTGTTCCAGGACCAG...TGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
CDS-3UTR GCA 90 bp AAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCAGCTGCCTGAGCTTTaGCTGTGCACACCCCACCTC +
Preference number: 4 (lower is better)
Translates to: KLRDTKKCKGPASPCIPLQLPEL*LCTPHL
Trigger: GAGGTGGGGTGTGCACAGGCAAAGCTCAGGCAGCTG...CAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
CDS-3UTR GCA 90 bp AAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGGGACCTGCATCCCCATaGATCCCTCTGCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: KLRDTKKCKGPASPCIPLGPASP*IPLPIC
Trigger: GCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCC...CAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR GCA 90 bp GAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGGTCAGAAATGCAAGGGACCTaGATCCCCATGCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: EQALLPGNRLRSGVPVGSEMQGT*IPMHPS
Trigger: AGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTC...TGACCCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR GCA 90 bp TTCATTCGCTTCATCTCAAACTCCCTCCAAACCCGGGCTGCAACTTGGGCCTCCCTGAGATCATACCACTaGACTCCCGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: FIRFISNSLQTRAATWASLRSYH*TPAWVT
Trigger: TGTCACCCAGGCGGGAGTGCAGTGGTATGATCTCAG...GGAGGCCCAAGTTGCAGCCCGGGTTTGGAGGGAGTTTGAGATGAAGCGAATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR CCA 90 bp ATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGCTCATAGTCGGGCACTaGGTGGGGCCTAGGCTTATG +
Preference number: 4 (lower is better)
Translates to: ISLGWRAGPTSREQVEIWLIVGH*VGPRLM
Trigger: CATAAGCCTAGGCCCCACCCAGTGCCCGACTATGAG...CCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CCA 90 bp CAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCAGGGGAAGAACTCTCCGTACTaGTCCTGGAACACTGCGACA +
Preference number: 4 (lower is better)
Translates to: QEMQGTCIPMHPSAHLQGKNSPY*SWNTAT
Trigger: TGTCGCAGTGTTCCAGGACCAGTACGGAGAGTTCTT...CCCCTGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
CDS-3UTR CCA 90 bp TTTGCCTGTGCACACCCCACCTCGTGCTGGAGCTCCAAGAACTCTCCGTACTGGAAGAACTCTCCGTACTaGTCCTGGAACACTGCGACA +
Preference number: 4 (lower is better)
Translates to: FACAHPTSCWSSKNSPYWKNSPY*SWNTAT
Trigger: TGTCGCAGTGTTCCAGGACCAGTACGGAGAGTTCTT...CCAGTACGGAGAGTTCTTGGAGCTCCAGCACGAGGTGGGGTGTGCACAGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR CCA 90 bp TGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGAACTTGGGCCTCCTTCTaGCTTTGGGGTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CLFHWDGEQALLPGNRLRTWASF*LWGGGR
Trigger: CCTGCCCCCACCCCAAAGCCAGAAGGAGGCCCAAGT...TCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
CDS-3UTR CCA 90 bp AAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGACCCGGGCTGCAACTTaGGCCTCCTTCTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: KLRDTKKCKGPASPCIPLTRAAT*ASFWLW
Trigger: CCAAAGCCAGAAGGAGGCCCAAGTTGCAGCCCGGGT...CAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
CDS-3UTR CCA 90 bp AAACTGAAGAGGCATTTGCAATCCAGGAGAAAGCGACCCCTGGTAGGGGGAGCACAGAGGAGGAAGTCCTaGAAGGCCTTCCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KLKRHLQSRRKRPLVGGAQRRKS*KAFLEE
Trigger: CTCCTCCAGGAAGGCCTTCCAGGACTTCCTCCTCTG...TGCTCCCCCTACCAGGGGTCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599286.1
CDS-3UTR CCA 90 bp GATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAACCCGGGCTGCAACTTaGGCCTCCTTAGCTCATAGT +
Preference number: 4 (lower is better)
Translates to: DGEQALLPGNRLRSGVPVTRAAT*ASLAHS
Trigger: ACTATGAGCTAAGGAGGCCCAAGTTGCAGCCCGGGT...TACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599286.1
ENST00000601529.5
CDS-3UTR CCA 90 bp GTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTACCCGGGCTGCAACTTaGGCCTCCTTAGCTCATAGT +
Preference number: 4 (lower is better)
Translates to: VEIWSPCRVRARGPRGGSTRAAT*ASLAHS
Trigger: ACTATGAGCTAAGGAGGCCCAAGTTGCAGCCCGGGT...ACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599286.1
ENST00000601529.5
CDS-3UTR CCA 90 bp TTTCTGGATCTGAGTCTTGAGATGCCTCAGTTTACCCTTCAGGTAGTGGCAGCGGTAATCCCAGCAGTCTaGGAGGCCGAGGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: FLDLSLEMPQFTLQVVAAVIPAV*EAEVGG
Trigger: TCCGCCCACCTCGGCCTCCCAGACTGCTGGGATTAC...CGCTGCCACTACCTGAAGGGTAAACTGAGGCATCTCAAGACTCAGATCCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598068.5
CDS-3UTR TCA 90 bp CAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCAGGGGGAGCTGAGTCCAAACTaGAGAGGCATTTGCAATCCA +
Preference number: 4 (lower is better)
Translates to: QEMQGTCIPMHPSAHLQGELSPN*RGICNP
Trigger: TGGATTGCAAATGCCTCTTCAGTTTGGACTCAGCTC...CCCCTGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR TCA 90 bp AGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCAGGGGCAGAGCTGAGTCCAAACTaGAGAGGCATTTGCAATCCA +
Preference number: 4 (lower is better)
Translates to: RNARDLHPHASLCPSAGAELSPN*RGICNP
Trigger: TGGATTGCAAATGCCTCTTCAGTTTGGACTCAGCTC...TGCCCCTGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR TCA 90 bp TTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAAGGGGCTGTCAGAGCTaGGTCCAAACTGAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: FHWDGEQALLPGNRLRSGRGCQS*VQTEEA
Trigger: TGCCTCTTCAGTTTGGACTCAGCTCTGACAGCCCCT...TCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR GCA 90 bp CATTCGCTTCATCTCAAACTCCCTCCAAACCCGGGCTGCAACTTGGGCCTCCTTAATCTTCTTGGTCTTTaGCTTGTGGGGTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: HSLHLKLPPNPGCNLGLLNLLGL*LVGSRL
Trigger: CAGCCGGGACCCCACAAGGCAAAGACCAAGAAGATT...AAGGAGGCCCAAGTTGCAGCCCGGGTTTGGAGGGAGTTTGAGATGAAGCGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR GCA 90 bp AACAGGTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGAATCTTCTTGGTCTTTaGCTTGTGGGGTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: NRLRSGVPVGSELEDPEENLLGL*LVGSRL
Trigger: CAGCCGGGACCCCACAAGGCAAAGACCAAGAAGATT...CTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAACCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR GCA 90 bp TTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCCCTGAGCTTTGCCTGTaGACACCCCACCTCGTGCTG +
Preference number: 4 (lower is better)
Translates to: FISLGWRAGPTSREQVEIPELCL*TPHLVL
Trigger: CAGCACGAGGTGGGGTGTGCACAGGCAAAGCTCAGG...GATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
CDS-3UTR GCA 90 bp TGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGACCTGAGCTTTGCCTGTaGACACCCCACCTCGTGCTG +
Preference number: 4 (lower is better)
Translates to: CLFHWDGEQALLPGNRLRPELCL*TPHLVL
Trigger: CAGCACGAGGTGGGGTGTGCACAGGCAAAGCTCAGG...TCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
CDS-3UTR GCA 90 bp TTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTCAGCTGCCTGAGCTTTaGCTGTGCACACCCCACCTC +
Preference number: 4 (lower is better)
Translates to: LFHWDGEQALLPGNRLRSQLPEL*LCTPHL
Trigger: GAGGTGGGGTGTGCACAGGCAAAGCTCAGGCAGCTG...AGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
CDS-3UTR GCA 90 bp ACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGCAGCTGCCTGAGCTTTaGCTGTGCACACCCCACCTC +
Preference number: 4 (lower is better)
Translates to: TCLFHWDGEQALLPGNRLQLPEL*LCTPHL
Trigger: GAGGTGGGGTGTGCACAGGCAAAGCTCAGGCAGCTG...CAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
CDS-3UTR GCA 90 bp GCAAGAGGAAAAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCCCCATGCATCCCTCTaGCCATCTGCAGGGGCACTT +
Preference number: 4 (lower is better)
Translates to: ARGKAERYQEMQGTCIPMPHASL*PSAGAL
Trigger: AAGTGCCCCTGCAGATGGGCAGAGGGATGCATGGGG...CATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTTTTCCTCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR GCA 90 bp AAAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTCCCCATGCATCCCTCTaGCCATCTGCAGGGGCACTT +
Preference number: 4 (lower is better)
Translates to: KAERYQEMQGTCIPMHPSPHASL*PSAGAL
Trigger: AAGTGCCCCTGCAGATGGGCAGAGGGATGCATGGGG...AGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR GCA 90 bp AAAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGGACCTGCATCCCCATaGATCCCTCTGCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: KAERYQEMQGTCIPMHPSGPASP*IPLPIC
Trigger: GCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCC...AGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR GCA 90 bp ATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGGGACCTGCATCCCCATaGATCCCTCTGCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: MFISLGWRAGPTSREQVEGPASP*IPLPIC
Trigger: GCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCC...CTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000601529.5
CDS-3UTR GCA 90 bp GATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCGAAATGCAAGGGACCTaGATCCCCATGCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: DTKKCKGPASPCIPLPICEMQGT*IPMHPS
Trigger: AGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTC...GCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR GCA 90 bp CAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCAGGGGAGCTGCTTAACTCTCTaGCTTTCATTCTCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: QEMQGTCIPMHPSAHLQGSCLTL*LSFSEP
Trigger: AGGCTCGGAGAATGAAAGGCAGAGAGTTAAGCAGCT...CCCCTGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598068.5
CDS-3UTR CCA 90 bp AATACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGCTGGAGCTCCGAGCCTaGATCTGCTGTCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: NTCLFHWDGEQALLPGNRLELRA*ICCRRG
Trigger: GCCTCTCCGACAGCAGATCCAGGCTCGGAGCTCCAG...CCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CCA 90 bp CAGGTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGACCTCTCACTGCTCACTaGCGGGTACTTAAGCTCATA +
Preference number: 4 (lower is better)
Translates to: QVEIWSPCRVRARGPRGGPLTAH*RVLKLI
Trigger: TATGAGCTTAAGTACCCGCCAGTGAGCAGTGAGAGG...TCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000600232.5
CDS-3UTR CCA 90 bp GGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAAGAACTCTCCGTACTaGTCCTGGAACACTGCGACA +
Preference number: 4 (lower is better)
Translates to: GWRAGPTSREQVEIWSPCKNSPY*SWNTAT
Trigger: TGTCGCAGTGTTCCAGGACCAGTACGGAGAGTTCTT...ACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
CDS-3UTR CCA 90 bp ATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGCACCCCACCTCGTGCTaGAGCTCCAAGAACTCTCCG +
Preference number: 4 (lower is better)
Translates to: MFISLGWRAGPTSREQVEHPTSC*SSKNSP
Trigger: CGGAGAGTTCTTGGAGCTCCAGCACGAGGTGGGGTG...CTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
CDS-3UTR CCA 90 bp GAAAAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCACCCCACCTCGTGCTaGAGCTCCAAGAACTCTCCG +
Preference number: 4 (lower is better)
Translates to: EKLRDTKKCKGPASPCIPHPTSC*SSKNSP
Trigger: CGGAGAGTTCTTGGAGCTCCAGCACGAGGTGGGGTG...AGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
CDS-3UTR CCA 90 bp TTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTCACCCCACCTCGTGCTaGAGCTCCAAGAACTCTCCG +
Preference number: 4 (lower is better)
Translates to: LFHWDGEQALLPGNRLRSHPTSC*SSKNSP
Trigger: CGGAGAGTTCTTGGAGCTCCAGCACGAGGTGGGGTG...AGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
CDS-3UTR CCA 90 bp GAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGGTCACCCTCGCTGTCTCCTTaGTCATCGAATTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: EQALLPGNRLRSGVPVGSPSLSP*SSNFWI
Trigger: GATCCAGAAATTCGATGACCAAGGAGACAGCGAGGG...TGACCCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CCA 90 bp TGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGCCCTCGCTGTCTCCTTaGTCATCGAATTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: WRAGPTSREQVEIWSPCRPSLSP*SSNFWI
Trigger: GATCCAGAAATTCGATGACCAAGGAGACAGCGAGGG...CCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CCA 90 bp GGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTCCCTCGCTGTCTCCTTaGTCATCGAATTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: GWRAGPTSREQVEIWSPCPSLSP*SSNFWI
Trigger: GATCCAGAAATTCGATGACCAAGGAGACAGCGAGGG...ACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CCA 90 bp GGAAAAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCCAGAGGAGGAAGTCCTaGAAGGCCTTCCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GKAERYQEMQGTCIPMHPQRRKS*KAFLEE
Trigger: CTCCTCCAGGAAGGCCTTCCAGGACTTCCTCCTCTG...GGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CCA 90 bp CAGGTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAGAACAGGTTGAGATCTaGAGTCCCTGTAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: QVEIWSPCRVRARGPRGGEQVEI*SPCRVR
Trigger: TCTGACCCTACAGGGACTCCAGATCTCAACCTGTTC...TCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR CCA 90 bp AGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGGTCGAACAGGTTGAGATCTaGAGTCCCTGTAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: RAGPTSREQVEIWSPCRVEQVEI*SPCRVR
Trigger: TCTGACCCTACAGGGACTCCAGATCTCAACCTGTTC...GACCCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR TCA 90 bp GGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGGTCGAATTTCTGGATCTaGGTCTTGAGATGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: GEQALLPGNRLRSGVPVGSNFWI*VLRCLS
Trigger: ACTGAGGCATCTCAAGACTCAGATCCAGAAATTCGA...CCCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000601529.5
CDS-3UTR TCA 90 bp TGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGGAGCTGAGTCCAAACTaGAGAGGCATTTGCAATCCA +
Preference number: 4 (lower is better)
Translates to: WRAGPTSREQVEIWSPCRELSPN*RGICNP
Trigger: TGGATTGCAAATGCCTCTTCAGTTTGGACTCAGCTC...CCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR GCA 90 bp TTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGACTTCCGTCCGGGTTGTaGATTTACTGCAGGATGGAC +
Preference number: 4 (lower is better)
Translates to: FHWDGEQALLPGNRLRSGLPSGL*IYCRMD
Trigger: GTCCATCCTGCAGTAAATGCACAACCCGGACGGAAG...TCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215061.9
ENST00000601529.5
CDS-3UTR GCA 90 bp GCAAGAGGAAAAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGTGGGGCCTAGGCTTATaGCCCTTAGGGATGGCTCCA +
Preference number: 4 (lower is better)
Translates to: ARGKAERYQEMQGTCIPMWGLGL*PLGMAP
Trigger: TGGAGCCATCCCTAAGGGGCATAAGCCTAGGCCCCA...CATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTTTTCCTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR GCA 90 bp TGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGAGAGATACCAAGAAATaGAAGGGACCTGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: WRAGPTSREQVEIWSPCRRDTKK*KGPASP
Trigger: TGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCT...CCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR CCA 90 bp ATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGCTCATAGTCGGGCACTaGGTGGGGCCTAGGCTTATG +
Preference number: 4 (lower is better)
Translates to: MFISLGWRAGPTSREQVELIVGH*VGPRLM
Trigger: CATAAGCCTAGGCCCCACCCAGTGCCCGACTATGAG...CTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CCA 90 bp GATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCCCTCTCACTGCTCACTaGCGGGTACTTAAGCTCATA +
Preference number: 4 (lower is better)
Translates to: DTKKCKGPASPCIPLPICPLTAH*RVLKLI
Trigger: TATGAGCTTAAGTACCCGCCAGTGAGCAGTGAGAGG...GCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
CDS-3UTR CCA 90 bp CATTCGCTTCATCTCAAACTCCCTCCAAACCCGGGCTGCAACTTGGGCCTCCTTCCTCTCACTGCTCACTaGCGGGTACTTAAGCTCATA +
Preference number: 4 (lower is better)
Translates to: HSLHLKLPPNPGCNLGLLPLTAH*RVLKLI
Trigger: TATGAGCTTAAGTACCCGCCAGTGAGCAGTGAGAGG...AAGGAGGCCCAAGTTGCAGCCCGGGTTTGGAGGGAGTTTGAGATGAAGCGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR CCA 90 bp GTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTAAGAACTCTCCGTACTaGTCCTGGAACACTGCGACA +
Preference number: 4 (lower is better)
Translates to: VEIWSPCRVRARGPRGGSKNSPY*SWNTAT
Trigger: TGTCGCAGTGTTCCAGGACCAGTACGGAGAGTTCTT...ACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000600232.5
CDS-3UTR CCA 90 bp TTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTCCCCTCGCTGTCTCCTTaGTCATCGAATTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: LRSGVPVGSELEDPEEEVPSLSP*SSNFWI
Trigger: GATCCAGAAATTCGATGACCAAGGAGACAGCGAGGG...GACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CCA 90 bp AACAGGTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGCCCTCGCTGTCTCCTTaGTCATCGAATTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: NRLRSGVPVGSELEDPEEPSLSP*SSNFWI
Trigger: GATCCAGAAATTCGATGACCAAGGAGACAGCGAGGG...CTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAACCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CCA 90 bp CTAATACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACACCTGGAAGGCCTTCCTaGAGGAGGGGCTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LIHVYFTGMESRPYFQGTPGRPS*RRGCQS
Trigger: GCTCTGACAGCCCCTCCTCCAGGAAGGCCTTCCAGG...TGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR CCA 90 bp TGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGACAGAGGAGGAAGTCCTaGAAGGCCTTCCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: CLFHWDGEQALLPGNRLRQRRKS*KAFLEE
Trigger: CTCCTCCAGGAAGGCCTTCCAGGACTTCCTCCTCTG...TCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR CCA 90 bp AGGTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGAACAGGTTGAGATCTaGAGTCCCTGTAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: RLRSGVPVGSELEDPEEEEQVEI*SPCRVR
Trigger: TCTGACCCTACAGGGACTCCAGATCTCAACCTGTTC...TTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR CCA 90 bp TCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTGAACAGGTTGAGATCTaGAGTCCCTGTAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: SLGWRAGPTSREQVEIWSEQVEI*SPCRVR
Trigger: TCTGACCCTACAGGGACTCCAGATCTCAACCTGTTC...ACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR CCA 90 bp GTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTGAACAGGTTGAGATCTaGAGTCCCTGTAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: VEIWSPCRVRARGPRGGSEQVEI*SPCRVR
Trigger: TCTGACCCTACAGGGACTCCAGATCTCAACCTGTTC...ACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR TCA 90 bp GATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTATCTGGATCTGAGTCTTaGGATGCCTCAGTTTACCCT +
Preference number: 4 (lower is better)
Translates to: DGEQALLPGNRLRSGVPVSGSES*DASVYP
Trigger: AGGGTAAACTGAGGCATCTCAAGACTCAGATCCAGA...TACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000601529.5
CDS-3UTR TCA 90 bp AGGTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGAGCTGAGTCCAAACTaGAGAGGCATTTGCAATCCA +
Preference number: 4 (lower is better)
Translates to: RLRSGVPVGSELEDPEEEELSPN*RGICNP
Trigger: TGGATTGCAAATGCCTCTTCAGTTTGGACTCAGCTC...TTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR TCA 90 bp AACAGGTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAGCTGAGTCCAAACTaGAGAGGCATTTGCAATCCA +
Preference number: 4 (lower is better)
Translates to: NRLRSGVPVGSELEDPEEELSPN*RGICNP
Trigger: TGGATTGCAAATGCCTCTTCAGTTTGGACTCAGCTC...CTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAACCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR TCA 90 bp GCAAGAGGAAAAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGAGGGGCTGTCAGAGCTaGGTCCAAACTGAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: ARGKAERYQEMQGTCIPMRGCQS*VQTEEA
Trigger: TGCCTCTTCAGTTTGGACTCAGCTCTGACAGCCCCT...CATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTTTTCCTCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR GCA 90 bp TCTAATACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACCTCCGAGCCTGGATCTaGTGTCGGAGAGGCACTTCC +
Preference number: 4 (lower is better)
Translates to: SNTCLFHWDGEQALLPGNLRAWI*CRRGTS
Trigger: GGAAGTGCCTCTCCGACAGCAGATCCAGGCTCGGAG...GTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTATTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000600232.5
ENST00000601529.5
CDS-3UTR GCA 90 bp ATACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGGGGCCTAGGCTTATaGCCCTTAGGGATGGCTCCA +
Preference number: 4 (lower is better)
Translates to: IHVYFTGMESRPYFQGTGWGLGL*PLGMAP
Trigger: TGGAGCCATCCCTAAGGGGCATAAGCCTAGGCCCCA...ACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR GCA 90 bp TCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTAGAGATACCAAGAAATaGAAGGGACCTGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: SLGWRAGPTSREQVEIWSRDTKK*KGPASP
Trigger: TGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCT...ACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR GCA 90 bp AGGTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAAGAGATACCAAGAAATaGAAGGGACCTGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: RLRSGVPVGSELEDPEEERDTKK*KGPASP
Trigger: TGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCT...TTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR GCA 90 bp TTCATTCGCTTCATCTCAAACTCCCTCCAAACCCGGGCTGCAACTTGGGCCTCCACAAATACAAAAATTTaGCAGGCACGGTGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: FIRFISNSLQTRAATWASTNTKI*QARWWA
Trigger: CGCCCACCACCGTGCCTGGCAAATTTTTGTATTTGT...GGAGGCCCAAGTTGCAGCCCGGGTTTGGAGGGAGTTTGAGATGAAGCGAATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR CCA 90 bp TTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGACCTCTCACTGCTCACTaGCGGGTACTTAAGCTCATA +
Preference number: 4 (lower is better)
Translates to: FHWDGEQALLPGNRLRSGPLTAH*RVLKLI
Trigger: TATGAGCTTAAGTACCCGCCAGTGAGCAGTGAGAGG...TCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
CDS-3UTR CCA 90 bp CTAATACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACACACCCCACCTCGTGCTaGAGCTCCAAGAACTCTCCG +
Preference number: 4 (lower is better)
Translates to: LIHVYFTGMESRPYFQGTHPTSC*SSKNSP
Trigger: CGGAGAGTTCTTGGAGCTCCAGCACGAGGTGGGGTG...TGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
CDS-3UTR CCA 90 bp ATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGGAACAGGTTGAGATCTaGAGTCCCTGTAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: ISLGWRAGPTSREQVEIWEQVEI*SPCRVR
Trigger: TCTGACCCTACAGGGACTCCAGATCTCAACCTGTTC...CCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR TCA 90 bp ATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCATCTGGATCTGAGTCTTaGGATGCCTCAGTTTACCCT +
Preference number: 4 (lower is better)
Translates to: IPRNARDLHPHASLCPSASGSES*DASVYP
Trigger: AGGGTAAACTGAGGCATCTCAAGACTCAGATCCAGA...TGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR TCA 90 bp TTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTCTCGAATTTCTGGATCTaGGTCTTGAGATGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LRSGVPVGSELEDPEEEVSNFWI*VLRCLS
Trigger: ACTGAGGCATCTCAAGACTCAGATCCAGAAATTCGA...GACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR TCA 90 bp TCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTTCGAATTTCTGGATCTaGGTCTTGAGATGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SLGWRAGPTSREQVEIWSSNFWI*VLRCLS
Trigger: ACTGAGGCATCTCAAGACTCAGATCCAGAAATTCGA...ACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000601529.5
CDS-3UTR TCA 90 bp ATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGGAGCTGAGTCCAAACTaGAGAGGCATTTGCAATCCA +
Preference number: 4 (lower is better)
Translates to: ISLGWRAGPTSREQVEIWELSPN*RGICNP
Trigger: TGGATTGCAAATGCCTCTTCAGTTTGGACTCAGCTC...CCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR TCA 90 bp AATACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGAGGGGCTGTCAGAGCTaGGTCCAAACTGAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: NTCLFHWDGEQALLPGNRRGCQS*VQTEEA
Trigger: TGCCTCTTCAGTTTGGACTCAGCTCTGACAGCCCCT...CCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR GCA 90 bp TGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGAAATCTTCTTGGTCTTTaGCTTGTGGGGTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: CLFHWDGEQALLPGNRLRNLLGL*LVGSRL
Trigger: CAGCCGGGACCCCACAAGGCAAAGACCAAGAAGATT...TCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR GCA 90 bp AAAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGAAATGCAAGGGACCTaGATCCCCATGCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: KAERYQEMQGTCIPMHPSEMQGT*IPMHPS
Trigger: AGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTC...AGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR GCA 90 bp TTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGAAATGCAAGGGACCTaGATCCCCATGCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: LFHWDGEQALLPGNRLRSEMQGT*IPMHPS
Trigger: AGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTC...AGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR GCA 90 bp ATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGGAAATGCAAGGGACCTaGATCCCCATGCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: MFISLGWRAGPTSREQVEEMQGT*IPMHPS
Trigger: AGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTC...CTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR GCA 90 bp AAACTGAAGAGGCATTTGCAATCCAGGAGAAAGCGACCCCTGGTAGGGGGAGCTCTGTGGCCTTCAAGCTaGTTAACTCTCTGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: KLKRHLQSRRKRPLVGGALWPSS*LTLCLS
Trigger: TGAAAGGCAGAGAGTTAAGCAGCTTGAAGGCCACAG...AGCTCCCCCTACCAGGGGTCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598068.5
3UTR CAA 72 bp GGGCACTTAGAAGTACACGGAGCCCTCGCTGTCTCCTaGGTCATCGAATTTCTGGATCTGAGTCTTGAGATG +
Preference number: 4 (lower is better)
Translates to: GHLEVHGALAVS*VIEFLDLSLEM
Trigger: CATCTCAAGACTCAGATCCAGAAATTCGATGACCAAGGAGACAGCGAGGGCTCCGTGTACTTCTAAGTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
CDS-3UTR GCA 90 bp AATACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGAATCTTCTTGGTCTTTaGCTTGTGGGGTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: NTCLFHWDGEQALLPGNRNLLGL*LVGSRL
Trigger: CAGCCGGGACCCCACAAGGCAAAGACCAAGAAGATT...CCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CCA 90 bp ACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGCCTCTCACTGCTCACTaGCGGGTACTTAAGCTCATA +
Preference number: 4 (lower is better)
Translates to: TCLFHWDGEQALLPGNRLPLTAH*RVLKLI
Trigger: TATGAGCTTAAGTACCCGCCAGTGAGCAGTGAGAGG...CAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
CDS-3UTR CCA 90 bp TTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCAAGAACTCTCCGTACTaGTCCTGGAACACTGCGACA +
Preference number: 4 (lower is better)
Translates to: FISLGWRAGPTSREQVEIKNSPY*SWNTAT
Trigger: TGTCGCAGTGTTCCAGGACCAGTACGGAGAGTTCTT...GATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
CDS-3UTR TCA 90 bp TTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTCTGGATCTGAGTCTTaGGATGCCTCAGTTTACCCT +
Preference number: 4 (lower is better)
Translates to: FISLGWRAGPTSREQVEISGSES*DASVYP
Trigger: AGGGTAAACTGAGGCATCTCAAGACTCAGATCCAGA...GATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000601529.5
CDS-3UTR GCA 90 bp TCTAATACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAATCTTCTTGGTCTTTaGCTTGTGGGGTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: SNTCLFHWDGEQALLPGNNLLGL*LVGSRL
Trigger: CAGCCGGGACCCCACAAGGCAAAGACCAAGAAGATT...GTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR GCA 90 bp TTTCTGGATCTGAGTCTTGAGATGCCTCAGTTTACCCTTCAGGTAGTGGCAGCGAGAGATACCAAGAAATaGAAGGGACCTGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: FLDLSLEMPQFTLQVVAARDTKK*KGPASP
Trigger: TGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCT...CGCTGCCACTACCTGAAGGGTAAACTGAGGCATCTCAAGACTCAGATCCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
CDS-3UTR TCA 90 bp TACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTTCTGGATCTGAGTCTTaGGATGCCTCAGTTTACCCT +
Preference number: 4 (lower is better)
Translates to: YMFISLGWRAGPTSREQVSGSES*DASVYP
Trigger: AGGGTAAACTGAGGCATCTCAAGACTCAGATCCAGA...AACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000601529.5
CDS-3UTR TCA 90 bp ACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGTCGAATTTCTGGATCTaGGTCTTGAGATGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: TCLFHWDGEQALLPGNRLSNFWI*VLRCLS
Trigger: ACTGAGGCATCTCAAGACTCAGATCCAGAAATTCGA...CAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000601529.5
CDS-3UTR GCA 90 bp AATACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGACAAATACAAAAATTTaGCAGGCACGGTGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: NTCLFHWDGEQALLPGNRTNTKI*QARWWA
Trigger: CGCCCACCACCGTGCCTGGCAAATTTTTGTATTTGT...CCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598068.5
CDS-3UTR CCA 90 bp TCTAATACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACGAACAGGTTGAGATCTaGAGTCCCTGTAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: SNTCLFHWDGEQALLPGNEQVEI*SPCRVR
Trigger: TCTGACCCTACAGGGACTCCAGATCTCAACCTGTTC...GTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTATTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR TCA 90 bp GTCTCCTTGGTCATCGAATTTCTGGATCTGAGTCTTGAGATGCCTCAGTTTACCTCTGGATCTGAGTCTTaGGATGCCTCAGTTTACCCT +
Preference number: 4 (lower is better)
Translates to: VSLVIEFLDLSLEMPQFTSGSES*DASVYP
Trigger: AGGGTAAACTGAGGCATCTCAAGACTCAGATCCAGA...GGTAAACTGAGGCATCTCAAGACTCAGATCCAGAAATTCGATGACCAAGGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
CDS-3UTR TCA 90 bp AATACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTCGAATTTCTGGATCTaGGTCTTGAGATGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: NTCLFHWDGEQALLPGNRSNFWI*VLRCLS
Trigger: ACTGAGGCATCTCAAGACTCAGATCCAGAAATTCGA...CCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000601529.5
CDS-3UTR TCA 90 bp CTAATACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGAGCTGAGTCCAAACTaGAGAGGCATTTGCAATCCA +
Preference number: 4 (lower is better)
Translates to: LIHVYFTGMESRPYFQGTELSPN*RGICNP
Trigger: TGGATTGCAAATGCCTCTTCAGTTTGGACTCAGCTC...TGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS CCA 90 bp TCGTGTCCCGCGCGCGGCGGGGGTGGTCTGCGGGCGGCCTGTGGGTaGACACGCGGAGAGGACACGCCTGACGACGCGCACGGAGAAAGG +
Preference number: 5 (lower is better)
Translates to: SCPARGGGGLRAACG*TRGEDTPDDAHGER
Trigger: CCTTTCTCCGTGCGCGTCGTCAGGCGTGTCCTCTCCGCGTGTCCACCCACAGGCCGCCCGCAGACCACCCCCGCCGCGCGCGGGACACGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597836.5
CDS TCA 90 bp TGGTCTGCGGGCGGCCTGTGGGTGGACACGCGGAGAGGACACGCCTaGCGACGCGCACGGAGAAAGGACGCGCGGGCAGCTCGGCCGAAG +
Preference number: 5 (lower is better)
Translates to: WSAGGLWVDTRRGHA*RRARRKDARAARPK
Trigger: CTTCGGCCGAGCTGCCCGCGCGTCCTTTCTCCGTGCGCGTCGTCAGGCGTGTCCTCTCCGCGTGTCCACCCACAGGCCGCCCGCAGACCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597836.5
CDS CCA 90 bp CCCAGGCGGGTGAGTATGCAGGTGCCCCCGGGAGCCGCGAGTCTTTaGGGGCTCCCGGGTGGGCATCGGCCTCCGGGAGAAGCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: PRRVSMQVPPGAASL*GLPGGHRPPGEAAQ
Trigger: CTGAGCTGCTTCTCCCGGAGGCCGATGCCCACCCGGGAGCCCCCAAAGACTCGCGGCTCCCGGGGGCACCTGCATACTCACCCGCCTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000215061.9
ENST00000594283.5
ENST00000597836.5
ENST00000598068.5
ENST00000599588.5
ENST00000600232.5
ENST00000601529.5
ENST00000601576.1
ENST00000602236.5
CDS CCA 90 bp AGGCCGTCCGGCTCGCTACCGCCCCGGGTCACCTGTCCCAGCGTCTaGAGCTCCGAGCCTGGATCTGCTGTCGGAGAGGCACTTCCGTCC +
Preference number: 5 (lower is better)
Translates to: RPSGSLPPRVTCPSV*SSEPGSAVGEALPS
Trigger: GGACGGAAGTGCCTCTCCGACAGCAGATCCAGGCTCGGAGCTCCAGACGCTGGGACAGGTGACCCGGGGCGGTAGCGAGCCGGACGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601576.1
ENST00000602236.5
CDS CCA 90 bp GGGTGGTCTGCGGGCGGCCTGTCCCAGCGTCTGGAGCTCCGAGCCTaGATCTGCTGTCGGAGAGGCACTTCCGTCCGGGTTGTGCATTTA +
Preference number: 5 (lower is better)
Translates to: GWSAGGLSQRLELRA*ICCRRGTSVRVVHL
Trigger: TAAATGCACAACCCGGACGGAAGTGCCTCTCCGACAGCAGATCCAGGCTCGGAGCTCCAGACGCTGGGACAGGCCGCCCGCAGACCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000594283.5
ENST00000599588.5
ENST00000601529.5
CDS GCA 90 bp TCTGCGGGCGGCCTGTCCCAGCGTCTGGAGCTCCGAGCCTGGATCTaGTGTCGGAGAGGCACTTCCGTCCGGGTTGTGCATTTACTGCAG +
Preference number: 5 (lower is better)
Translates to: SAGGLSQRLELRAWI*CRRGTSVRVVHLLQ
Trigger: CTGCAGTAAATGCACAACCCGGACGGAAGTGCCTCTCCGACAGCAGATCCAGGCTCGGAGCTCCAGACGCTGGGACAGGCCGCCCGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000599588.5
ENST00000601529.5
CDS GCA 90 bp GCCCCGGGTCACCTGTCCCAGCGTCTGGAGCTCCGAGCCTGGATCTaGTGTCGGAGAGGCACTTCCGTCCGGGTTGTGCATTTACTGCAG +
Preference number: 5 (lower is better)
Translates to: APGHLSQRLELRAWI*CRRGTSVRVVHLLQ
Trigger: CTGCAGTAAATGCACAACCCGGACGGAAGTGCCTCTCCGACAGCAGATCCAGGCTCGGAGCTCCAGACGCTGGGACAGGTGACCCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601576.1
ENST00000602236.5
CDS CCA 90 bp GCTACCGCCCCGGGTCACCTGTCCCAGCGTCTGGAGCTCCGAGCCTaGATCTGCTGTCGGAGAGGCACTTCCGTCCGGGTTGTGCATTTA +
Preference number: 5 (lower is better)
Translates to: ATAPGHLSQRLELRA*ICCRRGTSVRVVHL
Trigger: TAAATGCACAACCCGGACGGAAGTGCCTCTCCGACAGCAGATCCAGGCTCGGAGCTCCAGACGCTGGGACAGGTGACCCGGGGCGGTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601576.1
ENST00000602236.5
CDS-3UTR CAA 90 bp TGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGGGGAGCCGCGAGTCTTaGGGGGCTCCCGGGTGGGCA +
Preference number: 5 (lower is better)
Translates to: WRAGPTSREQVEIWSPCRGSRES*GAPGWA
Trigger: TGCCCACCCGGGAGCCCCCAAAGACTCGCGGCTCCC...CCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CAA 90 bp CACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCGGGAGCCGCGAGTCTTaGGGGGCTCCCGGGTGGGCA +
Preference number: 5 (lower is better)
Translates to: HWDGEQALLPGNRLRSGVGSRES*GAPGWA
Trigger: TGCCCACCCGGGAGCCCCCAAAGACTCGCGGCTCCC...GACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CAA 90 bp TCCCTCTGCCCATCTGCAGGGGCACTTAGAAGTACACGGAGCCCTCGCTGTCTCGCTCCAATAGGCTTCTaGGCGCCCAGGAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SLCPSAGALRSTRSPRCLAPIGF*APRRAW
Trigger: CCAGGCCCTCCTGGGCGCCAAGAAGCCTATTGGAGC...GAGACAGCGAGGGCTCCGTGTACTTCTAAGTGCCCCTGCAGATGGGCAGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
CDS CCA 90 bp TTTGAGGCCTCGGGGCGCCAGTCCCTGCAGCTGCCACAGGAATCGTaGTCTGGAGTTAAATCGGGGTGTCGGGAAACCGGAGTCCCTCAA +
Preference number: 5 (lower is better)
Translates to: FEASGRQSLQLPQES*SGVKSGCRETGVPQ
Trigger: TTGAGGGACTCCGGTTTCCCGACACCCCGATTTAACTCCAGACCACGATTCCTGTGGCAGCTGCAGGGACTGGCGCCCCGAGGCCTCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594283.5
ENST00000596279.1
ENST00000599588.5
CDS-3UTR CAA 90 bp AAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGGGGAGCCGCGAGTCTTaGGGGGCTCCCGGGTGGGCA +
Preference number: 5 (lower is better)
Translates to: KLRDTKKCKGPASPCIPLGSRES*GAPGWA
Trigger: TGCCCACCCGGGAGCCCCCAAAGACTCGCGGCTCCC...CAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CAA 90 bp GTGCTGGAGCTCCAAGAACTCTCCGTACTGGTCCTGGAACACTGCGACATAGCGGCTCCAATAGGCTTCTaGGCGCCCAGGAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: VLELQELSVLVLEHCDIAAPIGF*APRRAW
Trigger: CCAGGCCCTCCTGGGCGCCAAGAAGCCTATTGGAGC...CGCTATGTCGCAGTGTTCCAGGACCAGTACGGAGAGTTCTTGGAGCTCCAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS GCA 90 bp CTCGTGCTGGAGCTCCAAGAACTCTCCGTACTGGTCCTGGAACACTaGGACATAGCGGCTCCGTTCCCTCTCACTGCTCACTGGCGGGTA +
Preference number: 5 (lower is better)
Translates to: LVLELQELSVLVLEH*DIAAPFPLTAHWRV
Trigger: TACCCGCCAGTGAGCAGTGAGAGGGAACGGAGCCGCTATGTCGCAGTGTTCCAGGACCAGTACGGAGAGTTCTTGGAGCTCCAGCACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000215061.9
ENST00000594283.5
ENST00000596279.1
ENST00000597836.5
ENST00000598068.5
ENST00000598172.1
ENST00000600232.5
ENST00000601576.1
CDS-3UTR CAA 90 bp GAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGGTCATTCTTGGTCTTTGCCTaGTGGGGTCCCGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: EQALLPGNRLRSGVPVGSFLVFA*WGPGWG
Trigger: GCCCCAGCCGGGACCCCACAAGGCAAAGACCAAGAA...TGACCCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CAA 90 bp TGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTTTCTTGGTCTTTGCCTaGTGGGGTCCCGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: WDGEQALLPGNRLRSGVPFLVFA*WGPGWG
Trigger: GCCCCAGCCGGGACCCCACAAGGCAAAGACCAAGAA...AGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CAA 90 bp CAGTTTACCCTTCAGGTAGTGGCAGCGAGCCTGCTTGTCCAGGAAGCCAGGATCTTCTTGGTCTTTGCCTaGTGGGGTCCCGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: QFTLQVVAASLLVQEARIFLVFA*WGPGWG
Trigger: GCCCCAGCCGGGACCCCACAAGGCAAAGACCAAGAA...GATCCTGGCTTCCTGGACAAGCAGGCTCGCTGCCACTACCTGAAGGGTAAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CAA 90 bp GATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCGCTCCAATAGGCTTCTaGGCGCCCAGGAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: DTKKCKGPASPCIPLPICAPIGF*APRRAW
Trigger: CCAGGCCCTCCTGGGCGCCAAGAAGCCTATTGGAGC...GCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CAA 90 bp GTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTGCTCCAATAGGCTTCTaGGCGCCCAGGAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: VEIWSPCRVRARGPRGGSAPIGF*APRRAW
Trigger: CCAGGCCCTCCTGGGCGCCAAGAAGCCTATTGGAGC...ACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CAA 90 bp TTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTCGCTCCAATAGGCTTCTaGGCGCCCAGGAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LRSGVPVGSELEDPEEEVAPIGF*APRRAW
Trigger: CCAGGCCCTCCTGGGCGCCAAGAAGCCTATTGGAGC...GACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CAA 90 bp CTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCAACCCGGGCTGCAACTaGGGCCTCCTTCTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: LGWRAGPTSREQVEIWSPNPGCN*GLLLAL
Trigger: CAAAGCCAGAAGGAGGCCCAAGTTGCAGCCCGGGTT...GGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
CDS-3UTR CAA 90 bp GGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAGGGAACCCGGGCTGCAACTaGGGCCTCCTTCTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: GEQALLPGNRLRSGVPVGNPGCN*GLLLAL
Trigger: CAAAGCCAGAAGGAGGCCCAAGTTGCAGCCCGGGTT...CCCTACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000600232.5
CDS-3UTR CAA 90 bp GTTTACCCTTCAGGTAGTGGCAGCGAGCCTGCTTGTCCAGGAAGCCAGGATCCTTGGCAGCGAGCCTGCTaGTCCAGGAAGCCAGGATCC +
Preference number: 5 (lower is better)
Translates to: VYPSGSGSEPACPGSQDPWQRAC*SRKPGS
Trigger: GGATCCTGGCTTCCTGGACAAGCAGGCTCGCTGCCA...AGGATCCTGGCTTCCTGGACAAGCAGGCTCGCTGCCACTACCTGAAGGGTAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598068.5
CDS-3UTR CAA 90 bp CTCCTTGAAACTGGGCACAGGCGACCGGGTGAGCCGGGCAAGGTGGCTCATGCCCTCAATTTTCTCTCCTaGAAACTGGGCACAGGCGAC +
Preference number: 5 (lower is better)
Translates to: LLETGHRRPGEPGKVAHALNFLS*KLGTGD
Trigger: GTCGCCTGTGCCCAGTTTCAAGGAGAGAAAATTGAG...GGCATGAGCCACCTTGCCCGGCTCACCCGGTCGCCTGTGCCCAGTTTCAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598068.5
CDS-3UTR CAA 90 bp AGGTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAATTCTTGGTCTTTGCCTaGTGGGGTCCCGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: RLRSGVPVGSELEDPEEEFLVFA*WGPGWG
Trigger: GCCCCAGCCGGGACCCCACAAGGCAAAGACCAAGAA...TTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CAA 90 bp AACAGGTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGTTCTTGGTCTTTGCCTaGTGGGGTCCCGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: NRLRSGVPVGSELEDPEEFLVFA*WGPGWG
Trigger: GCCCCAGCCGGGACCCCACAAGGCAAAGACCAAGAA...CTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAACCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CAA 90 bp CTGCCTGAGCTTTGCCTGTGCACACCCCACCTCGTGCTGGAGCTCCAAGAACTCCAATCTTCTTGGTCTTaGCCTTGTGGGGTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: LPELCLCTPHLVLELQELQSSWS*PCGVPA
Trigger: AGCCGGGACCCCACAAGGCAAAGACCAAGAAGATTG...GAGTTCTTGGAGCTCCAGCACGAGGTGGGGTGTGCACAGGCAAAGCTCAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR CAA 90 bp GCCCATCTGCAGGGGCACTTAGAAGTACACGGAGCCCTCGCTGTCTCCTTGGTCCAATCTTCTTGGTCTTaGCCTTGTGGGGTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: AHLQGHLEVHGALAVSLVQSSWS*PCGVPA
Trigger: AGCCGGGACCCCACAAGGCAAAGACCAAGAAGATTG...GACCAAGGAGACAGCGAGGGCTCCGTGTACTTCTAAGTGCCCCTGCAGATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CAA 90 bp CGTGCTGGAGCTCCAAGAACTCTCCGTACTGGTCCTGGAACACTGCGACATAGCAACCCGGGCTGCAACTaGGGCCTCCTTCTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: RAGAPRTLRTGPGTLRHSNPGCN*GLLLAL
Trigger: CAAAGCCAGAAGGAGGCCCAAGTTGCAGCCCGGGTT...GCTATGTCGCAGTGTTCCAGGACCAGTACGGAGAGTTCTTGGAGCTCCAGCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR CAA 90 bp CTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCTGGCAGCGAGCCTGCTaGTCCAGGAAGCCAGGATCC +
Preference number: 5 (lower is better)
Translates to: LRDTKKCKGPASPCIPLPWQRAC*SRKPGS
Trigger: GGATCCTGGCTTCCTGGACAAGCAGGCTCGCTGCCA...GGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CAA 90 bp AACAGGTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGTGGCAGCGAGCCTGCTaGTCCAGGAAGCCAGGATCC +
Preference number: 5 (lower is better)
Translates to: NRLRSGVPVGSELEDPEEWQRAC*SRKPGS
Trigger: GGATCCTGGCTTCCTGGACAAGCAGGCTCGCTGCCA...CTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAACCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CAA 90 bp CTGGGTGACAGAGCGAGATTCATTCGCTTCATCTCAAACTCCCTCCAAACCCGGTTCTTGGTCTTTGCCTaGTGGGGTCCCGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: LGDRARFIRFISNSLQTRFLVFA*WGPGWG
Trigger: GCCCCAGCCGGGACCCCACAAGGCAAAGACCAAGAA...CCGGGTTTGGAGGGAGTTTGAGATGAAGCGAATGAATCTCGCTCTGTCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR CAA 90 bp CAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCAGGGGCAATCTTCTTGGTCTTaGCCTTGTGGGGTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: QEMQGTCIPMHPSAHLQGQSSWS*PCGVPA
Trigger: AGCCGGGACCCCACAAGGCAAAGACCAAGAAGATTG...CCCCTGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CAA 90 bp CTCCTTGAAACTGGGCACAGGCGACCGGGTGAGCCGGGCAAGGTGGCTCATGCCTCAAACACAATCTTCTaGGTCTTTGCCTTGTGGGGT +
Preference number: 5 (lower is better)
Translates to: LLETGHRRPGEPGKVAHASNTIF*VFALWG
Trigger: ACCCCACAAGGCAAAGACCAAGAAGATTGTGTTTGA...GGCATGAGCCACCTTGCCCGGCTCACCCGGTCGCCTGTGCCCAGTTTCAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000598172.1
CDS-3UTR CAA 90 bp AAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGGCTCCAATAGGCTTCTaGGCGCCCAGGAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: KLRDTKKCKGPASPCIPLAPIGF*APRRAW
Trigger: CCAGGCCCTCCTGGGCGCCAAGAAGCCTATTGGAGC...CAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CAA 90 bp GCCCTCGCTGTCTCCTTGGTCATCGAATTTCTGGATCTGAGTCTTGAGATGCCTGCTCCAATAGGCTTCTaGGCGCCCAGGAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: ALAVSLVIEFLDLSLEMPAPIGF*APRRAW
Trigger: CCAGGCCCTCCTGGGCGCCAAGAAGCCTATTGGAGC...AGGCATCTCAAGACTCAGATCCAGAAATTCGATGACCAAGGAGACAGCGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CAA 90 bp AGGTTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAAACCCGGGCTGCAACTaGGGCCTCCTTCTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: RLRSGVPVGSELEDPEEENPGCN*GLLLAL
Trigger: CAAAGCCAGAAGGAGGCCCAAGTTGCAGCCCGGGTT...TTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000600232.5
CDS-3UTR CAA 90 bp CTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCGAGACCCGGAAGTCTTaGCAGCAGTCTGCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: LRDTKKCKGPASPCIPLPETRKS*QQSALW
Trigger: CCACAGGGCAGACTGCTGCAAAGACTTCCGGGTCTC...GGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598068.5
CDS-3UTR CAA 90 bp TGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTCAATCTTCTTGGTCTTaGCCTTGTGGGGTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: WDGEQALLPGNRLRSGVPQSSWS*PCGVPA
Trigger: AGCCGGGACCCCACAAGGCAAAGACCAAGAAGATTG...AGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CAA 90 bp ATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCAAACCCGGGCTGCAACTaGGGCCTCCTTCTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: IPRNARDLHPHASLCPSANPGCN*GLLLAL
Trigger: CAAAGCCAGAAGGAGGCCCAAGTTGCAGCCCGGGTT...TGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
CDS-3UTR CAA 90 bp AAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGTGGCAGCGAGCCTGCTaGTCCAGGAAGCCAGGATCC +
Preference number: 5 (lower is better)
Translates to: KLRDTKKCKGPASPCIPLWQRAC*SRKPGS
Trigger: GGATCCTGGCTTCCTGGACAAGCAGGCTCGCTGCCA...CAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS GCA 90 bp CCCAGCCTCACAGAAGTCTCAGGGGTGCAAGACCAAGCTGTGGGATaGAAGACTCACCATTCGCTTCATCTCAAACTCCCTCCAAACCCG +
Preference number: 5 (lower is better)
Translates to: PSLTEVSGVQDQAVG*KTHHSLHLKLPPNP
Trigger: CGGGTTTGGAGGGAGTTTGAGATGAAGCGAATGGTGAGTCTTGCATCCCACAGCTTGGTCTTGCACCCCTGAGACTTCTGTGAGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595769.1
ENST00000596279.1
CDS CCA 90 bp GGCACCCCAGCCTCACAGAAGTCTCAGGGGTGCAAGACCAAGCTGTaGGATGCAAGACTCACCATTCGCTTCATCTCAAACTCCCTCCAA +
Preference number: 5 (lower is better)
Translates to: GTPASQKSQGCKTKL*DARLTIRFISNSLQ
Trigger: TTGGAGGGAGTTTGAGATGAAGCGAATGGTGAGTCTTGCATCCCACAGCTTGGTCTTGCACCCCTGAGACTTCTGTGAGGCTGGGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595769.1
ENST00000596279.1
CDS-3UTR CAA 90 bp GAAAAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTTTCTTGGTCTTTGCCTaGTGGGGTCCCGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: EKLRDTKKCKGPASPCIPFLVFA*WGPGWG
Trigger: GCCCCAGCCGGGACCCCACAAGGCAAAGACCAAGAA...AGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CAA 90 bp TCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCAATCTTCTTGGTCTTaGCCTTGTGGGGTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: SLGWRAGPTSREQVEIWSQSSWS*PCGVPA
Trigger: AGCCGGGACCCCACAAGGCAAAGACCAAGAAGATTG...ACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CAA 90 bp GATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTACAATCTTCTTGGTCTTaGCCTTGTGGGGTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: DGEQALLPGNRLRSGVPVQSSWS*PCGVPA
Trigger: AGCCGGGACCCCACAAGGCAAAGACCAAGAAGATTG...TACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CAA 90 bp TTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTTGGCAGCGAGCCTGCTaGTCCAGGAAGCCAGGATCC +
Preference number: 5 (lower is better)
Translates to: LFHWDGEQALLPGNRLRSWQRAC*SRKPGS
Trigger: GGATCCTGGCTTCCTGGACAAGCAGGCTCGCTGCCA...AGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CAA 90 bp TTGAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTCCTTCCAGGGAACAGGTaGAGATCTGGAGTCCCTGTA +
Preference number: 5 (lower is better)
Translates to: LRSGVPVGSELEDPEEEVLPGNR*RSGVPV
Trigger: TACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAG...GACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR CAA 90 bp GATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCCTTCCAGGGAACAGGTaGAGATCTGGAGTCCCTGTA +
Preference number: 5 (lower is better)
Translates to: DTKKCKGPASPCIPLPICLPGNR*RSGVPV
Trigger: TACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAG...GCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CAA 90 bp ATGCATCCCTCTGCCCATCTGCAGGGGCACTTAGAAGTACACGGAGCCCTCGCTTCAAACACAATCTTCTaGGTCTTTGCCTTGTGGGGT +
Preference number: 5 (lower is better)
Translates to: MHPSAHLQGHLEVHGALASNTIF*VFALWG
Trigger: ACCCCACAAGGCAAAGACCAAGAAGATTGTGTTTGA...AGCGAGGGCTCCGTGTACTTCTAAGTGCCCCTGCAGATGGGCAGAGGGATGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CAA 90 bp ATGCATCCCTCTGCCCATCTGCAGGGGCACTTAGAAGTACACGGAGCCCTCGCTAAACTGAAGAGGCATTaGCAATCCAGGAGAAAGCGA +
Preference number: 5 (lower is better)
Translates to: MHPSAHLQGHLEVHGALAKLKRH*QSRRKR
Trigger: TCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGTTT...AGCGAGGGCTCCGTGTACTTCTAAGTGCCCCTGCAGATGGGCAGAGGGATGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CAA 90 bp ATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGCTTCCAGGGAACAGGTaGAGATCTGGAGTCCCTGTA +
Preference number: 5 (lower is better)
Translates to: ISLGWRAGPTSREQVEIWLPGNR*RSGVPV
Trigger: TACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAG...CCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS GCA 90 bp GAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTaGTTGTCCAGGAAGCCAGGATCCATTCGCTTCATCTCAAACTCC +
Preference number: 5 (lower is better)
Translates to: EIPRNARDLHPHASL*LSRKPGSIRFISNS
Trigger: GGAGTTTGAGATGAAGCGAATGGATCCTGGCTTCCTGGACAAGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600826.1
CDS-3UTR CAA 90 bp TGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGACAATCTTCTTGGTCTTaGCCTTGTGGGGTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: CLFHWDGEQALLPGNRLRQSSWS*PCGVPA
Trigger: AGCCGGGACCCCACAAGGCAAAGACCAAGAAGATTG...TCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CAA 90 bp GGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTAAACTGAAGAGGCATTaGCAATCCAGGAGAAAGCGA +
Preference number: 5 (lower is better)
Translates to: GWRAGPTSREQVEIWSPCKLKRH*QSRRKR
Trigger: TCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGTTT...ACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR CAA 90 bp GAGATCTGGAGTCCCTGTAGGGTCAGAGCTAGAGGACCCAGAGGAGGAAGTCCTAAACTGAAGAGGCATTaGCAATCCAGGAGAAAGCGA +
Preference number: 5 (lower is better)
Translates to: EIWSPCRVRARGPRGGSPKLKRH*QSRRKR
Trigger: TCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGTTT...AGGACTTCCTCCTCTGGGTCCTCTAGCTCTGACCCTACAGGGACTCCAGATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR CAA 90 bp TACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGCACTTCCGTCCGGGTaGTGCATTTACTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: YMFISLGWRAGPTSREQVALPSG*CIYCRM
Trigger: CATCCTGCAGTAAATGCACAACCCGGACGGAAGTGC...AACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215061.9
ENST00000601529.5
CDS-3UTR CAA 90 bp ATACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTGCACTTCCGTCCGGGTaGTGCATTTACTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: IHVYFTGMESRPYFQGTGALPSG*CIYCRM
Trigger: CATCCTGCAGTAAATGCACAACCCGGACGGAAGTGC...ACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215061.9
ENST00000601529.5
CDS-3UTR CAA 90 bp GATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGATCTGGAGTCCCTGTATCAAACACAATCTTCTaGGTCTTTGCCTTGTGGGGT +
Preference number: 5 (lower is better)
Translates to: DGEQALLPGNRLRSGVPVSNTIF*VFALWG
Trigger: ACCCCACAAGGCAAAGACCAAGAAGATTGTGTTTGA...TACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215061.9
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000601529.5
CDS-3UTR CAA 90 bp CATTCGCTTCATCTCAAACTCCCTCCAAACCCGGGCTGCAACTTGGGCCTCCTTTCAAACACAATCTTCTaGGTCTTTGCCTTGTGGGGT +
Preference number: 5 (lower is better)
Translates to: HSLHLKLPPNPGCNLGLLSNTIF*VFALWG
Trigger: ACCCCACAAGGCAAAGACCAAGAAGATTGTGTTTGA...AAGGAGGCCCAAGTTGCAGCCCGGGTTTGGAGGGAGTTTGAGATGAAGCGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598172.1
CDS-3UTR CAA 90 bp AAAGCTGAGAGATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCTCGCTGTCTCCTaGGTCATCGAATTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: KAERYQEMQGTCIPMHPSALAVS*VIEFLD
Trigger: ATCCAGAAATTCGATGACCAAGGAGACAGCGAGGGC...AGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTATCTCTCAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CAA 90 bp TGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGACTTCCAGGGAACAGGTaGAGATCTGGAGTCCCTGTA +
Preference number: 5 (lower is better)
Translates to: CLFHWDGEQALLPGNRLRLPGNR*RSGVPV
Trigger: TACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAG...TCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR CAA 90 bp ATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGCTTCCAGGGAACAGGTaGAGATCTGGAGTCCCTGTA +
Preference number: 5 (lower is better)
Translates to: MFISLGWRAGPTSREQVELPGNR*RSGVPV
Trigger: TACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAG...CTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR CAA 90 bp ATACCAAGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTGCCCATCTGCATCAAACACAATCTTCTaGGTCTTTGCCTTGTGGGGT +
Preference number: 5 (lower is better)
Translates to: IPRNARDLHPHASLCPSASNTIF*VFALWG
Trigger: ACCCCACAAGGCAAAGACCAAGAAGATTGTGTTTGA...TGCAGATGGGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCTTGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000597836.5
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CAA 90 bp CAATCCAGGAGAAAGCGACCCCTGGTAGGGGGAGCATTCGCTTCATCTCAAACTTCAAACACAATCTTCTaGGTCTTTGCCTTGTGGGGT +
Preference number: 5 (lower is better)
Translates to: QSRRKRPLVGGAFASSQTSNTIF*VFALWG
Trigger: ACCCCACAAGGCAAAGACCAAGAAGATTGTGTTTGA...AGTTTGAGATGAAGCGAATGCTCCCCCTACCAGGGGTCGCTTTCTCCTGGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599286.1
CDS-3UTR CAA 90 bp ATACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTGCCCTCGCTGTCTCCTaGGTCATCGAATTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: IHVYFTGMESRPYFQGTGALAVS*VIEFLD
Trigger: ATCCAGAAATTCGATGACCAAGGAGACAGCGAGGGC...ACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CAA 90 bp AATACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGCTTCCAGGGAACAGGTaGAGATCTGGAGTCCCTGTA +
Preference number: 5 (lower is better)
Translates to: NTCLFHWDGEQALLPGNRLPGNR*RSGVPV
Trigger: TACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAG...CCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR CAA 90 bp TACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTCTTCCAGGGAACAGGTaGAGATCTGGAGTCCCTGTA +
Preference number: 5 (lower is better)
Translates to: YMFISLGWRAGPTSREQVLPGNR*RSGVPV
Trigger: TACAGGGACTCCAGATCTCAACCTGTTCCCTGGAAG...AACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR CAA 90 bp GTCTCCTTGGTCATCGAATTTCTGGATCTGAGTCTTGAGATGCCTCAGTTTACCGCCCTCGCTGTCTCCTaGGTCATCGAATTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: VSLVIEFLDLSLEMPQFTALAVS*VIEFLD
Trigger: ATCCAGAAATTCGATGACCAAGGAGACAGCGAGGGC...GGTAAACTGAGGCATCTCAAGACTCAGATCCAGAAATTCGATGACCAAGGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598068.5
ENST00000601529.5
CDS-3UTR CAA 90 bp TGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTTGAGAAAACTGAAGAGGCATTaGCAATCCAGGAGAAAGCGA +
Preference number: 5 (lower is better)
Translates to: CLFHWDGEQALLPGNRLRKLKRH*QSRRKR
Trigger: TCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGTTT...TCTCAACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR CAA 90 bp ATACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAGGTAAACTGAAGAGGCATTaGCAATCCAGGAGAAAGCGA +
Preference number: 5 (lower is better)
Translates to: IHVYFTGMESRPYFQGTGKLKRH*QSRRKR
Trigger: TCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGTTT...ACCTGTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS-3UTR CAA 90 bp TCTAATACATGTTTATTTCACTGGGATGGAGAGCAGGCCCTACTTCCAGGGAACAAACTGAAGAGGCATTaGCAATCCAGGAGAAAGCGA +
Preference number: 5 (lower is better)
Translates to: SNTCLFHWDGEQALLPGNKLKRH*QSRRKR
Trigger: TCGCTTTCTCCTGGATTGCAAATGCCTCTTCAGTTT...GTTCCCTGGAAGTAGGGCCTGCTCTCCATCCCAGTGAAATAAACATGTATTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215061.9
ENST00000595573.1
ENST00000598068.5
ENST00000599286.1
ENST00000600232.5
ENST00000600826.1
ENST00000601529.5
CDS CCA 72 bp GCGCGCGGCGGGGGTGGTCTGCGGGCGGCCTGTGGGTaGACACGCGGAGAGGACACGCCTGACGACGCGCAC +
Preference number: 6 (lower is better)
Translates to: ARGGGGLRAACG*TRGEDTPDDAH
Trigger: GTGCGCGTCGTCAGGCGTGTCCTCTCCGCGTGTCCACCCACAGGCCGCCCGCAGACCACCCCCGCCGCGCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597836.5
CDS TCA 72 bp GGCGGCCTGTGGGTGGACACGCGGAGAGGACACGCCTaGCGACGCGCACGGAGAAAGGACGCGCGGGCAGCT +
Preference number: 6 (lower is better)
Translates to: GGLWVDTRRGHA*RRARRKDARAA
Trigger: AGCTGCCCGCGCGTCCTTTCTCCGTGCGCGTCGTCAGGCGTGTCCTCTCCGCGTGTCCACCCACAGGCCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597836.5
CDS CCA 72 bp GTGAGTATGCAGGTGCCCCCGGGAGCCGCGAGTCTTTaGGGGCTCCCGGGTGGGCATCGGCCTCCGGGAGAA +
Preference number: 6 (lower is better)
Translates to: VSMQVPPGAASL*GLPGGHRPPGE
Trigger: TTCTCCCGGAGGCCGATGCCCACCCGGGAGCCCCCAAAGACTCGCGGCTCCCGGGGGCACCTGCATACTCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000215061.9
ENST00000594283.5
ENST00000597836.5
ENST00000598068.5
ENST00000599588.5
ENST00000600232.5
ENST00000601529.5
ENST00000601576.1
ENST00000602236.5
CDS CCA 72 bp GGCTCGCTACCGCCCCGGGTCACCTGTCCCAGCGTCTaGAGCTCCGAGCCTGGATCTGCTGTCGGAGAGGCA +
Preference number: 6 (lower is better)
Translates to: GSLPPRVTCPSV*SSEPGSAVGEA
Trigger: TGCCTCTCCGACAGCAGATCCAGGCTCGGAGCTCCAGACGCTGGGACAGGTGACCCGGGGCGGTAGCGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601576.1
ENST00000602236.5
CDS CCA 72 bp CCGGGTCACCTGTCCCAGCGTCTGGAGCTCCGAGCCTaGATCTGCTGTCGGAGAGGCACTTCCGTCCGGGTT +
Preference number: 6 (lower is better)
Translates to: PGHLSQRLELRA*ICCRRGTSVRV
Trigger: AACCCGGACGGAAGTGCCTCTCCGACAGCAGATCCAGGCTCGGAGCTCCAGACGCTGGGACAGGTGACCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601576.1
ENST00000602236.5
CDS GCA 72 bp GGCCTGTCCCAGCGTCTGGAGCTCCGAGCCTGGATCTaGTGTCGGAGAGGCACTTCCGTCCGGGTTGTGCAT +
Preference number: 6 (lower is better)
Translates to: GLSQRLELRAWI*CRRGTSVRVVH
Trigger: ATGCACAACCCGGACGGAAGTGCCTCTCCGACAGCAGATCCAGGCTCGGAGCTCCAGACGCTGGGACAGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215061.9
ENST00000594283.5
ENST00000599588.5
ENST00000601529.5
CDS GCA 72 bp CACCTGTCCCAGCGTCTGGAGCTCCGAGCCTGGATCTaGTGTCGGAGAGGCACTTCCGTCCGGGTTGTGCAT +
Preference number: 6 (lower is better)
Translates to: HLSQRLELRAWI*CRRGTSVRVVH
Trigger: ATGCACAACCCGGACGGAAGTGCCTCTCCGACAGCAGATCCAGGCTCGGAGCTCCAGACGCTGGGACAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601576.1
ENST00000602236.5
CDS GCA 72 bp GGATCTGCTGTCGGAGAGGCACTTCCGTCCGGGTTGTaGATTTACTGCAGGATGGACCCGACTGGCGGGGTC +
Preference number: 6 (lower is better)
Translates to: GSAVGEALPSGL*IYCRMDPTGGV
Trigger: GACCCCGCCAGTCGGGTCCATCCTGCAGTAAATGCACAACCCGGACGGAAGTGCCTCTCCGACAGCAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602236.5
CDS CCA 72 bp TCGGGGCGCCAGTCCCTGCAGCTGCCACAGGAATCGTaGTCTGGAGTTAAATCGGGGTGTCGGGAAACCGGA +
Preference number: 6 (lower is better)
Translates to: SGRQSLQLPQES*SGVKSGCRETG
Trigger: TCCGGTTTCCCGACACCCCGATTTAACTCCAGACCACGATTCCTGTGGCAGCTGCAGGGACTGGCGCCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594283.5
ENST00000596279.1
ENST00000599588.5
CDS CAA 72 bp CCTGGATCTGCTGTCGGAGAGGCACTTCCGTCCGGGTaGTGCATTTACTGCAGGATGGACCCGACTGGCGGG +
Preference number: 6 (lower is better)
Translates to: PGSAVGEALPSG*CIYCRMDPTGG
Trigger: CCCGCCAGTCGGGTCCATCCTGCAGTAAATGCACAACCCGGACGGAAGTGCCTCTCCGACAGCAGATCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602236.5
CDS CCA 72 bp GCTCACTGGCGGGTACTTAAGCTCATAGTCGGGCACTaGGTGGGGCCTAGGCTTATGCCCCTTAGGGATGGC +
Preference number: 6 (lower is better)
Translates to: AHWRVLKLIVGH*VGPRLMPLRDG
Trigger: GCCATCCCTAAGGGGCATAAGCCTAGGCCCCACCCAGTGCCCGACTATGAGCTTAAGTACCCGCCAGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000215061.9
ENST00000594283.5
ENST00000596279.1
ENST00000597836.5
ENST00000598068.5
ENST00000598172.1
ENST00000600232.5
ENST00000601576.1
CDS CCA 72 bp TGCGACATAGCGGCTCCGTTCCCTCTCACTGCTCACTaGCGGGTACTTAAGCTCATAGTCGGGCACTGGGTG +
Preference number: 6 (lower is better)
Translates to: CDIAAPFPLTAH*RVLKLIVGHWV
Trigger: CACCCAGTGCCCGACTATGAGCTTAAGTACCCGCCAGTGAGCAGTGAGAGGGAACGGAGCCGCTATGTCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000215061.9
ENST00000594283.5
ENST00000596279.1
ENST00000597836.5
ENST00000598068.5
ENST00000598172.1
ENST00000600232.5
ENST00000601576.1
CDS CAA 72 bp AACTCATCCTCAAACACAATCTTCTTGGTCTTTGCCTaGTGGGGTCCCGGCTGGGGCTGGCACGGAGGGCGG +
Preference number: 6 (lower is better)
Translates to: NSSSNTIFLVFA*WGPGWGWHGGR
Trigger: CCGCCCTCCGTGCCAGCCCCAGCCGGGACCCCACAAGGCAAAGACCAAGAAGATTGTGTTTGAGGATGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000215061.9
ENST00000594283.5
ENST00000596279.1
ENST00000597836.5
ENST00000598068.5
ENST00000598172.1
ENST00000599588.5
ENST00000600232.5
ENST00000601529.5
ENST00000601576.1
ENST00000602236.5
CDS GCA 72 bp GAGCAACTCATCCTCAAACACAATCTTCTTGGTCTTTaGCTTGTGGGGTCCCGGCTGGGGCTGGCACGGAGG +
Preference number: 6 (lower is better)
Translates to: EQLILKHNLLGL*LVGSRLGLARR
Trigger: CCTCCGTGCCAGCCCCAGCCGGGACCCCACAAGGCAAAGACCAAGAAGATTGTGTTTGAGGATGAGTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000215061.9
ENST00000594283.5
ENST00000596279.1
ENST00000597836.5
ENST00000598068.5
ENST00000598172.1
ENST00000599588.5
ENST00000600232.5
ENST00000601529.5
ENST00000601576.1
ENST00000602236.5
CDS GCA 72 bp GAGCTCCAAGAACTCTCCGTACTGGTCCTGGAACACTaGGACATAGCGGCTCCGTTCCCTCTCACTGCTCAC +
Preference number: 6 (lower is better)
Translates to: ELQELSVLVLEH*DIAAPFPLTAH
Trigger: GTGAGCAGTGAGAGGGAACGGAGCCGCTATGTCGCAGTGTTCCAGGACCAGTACGGAGAGTTCTTGGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000215061.9
ENST00000594283.5
ENST00000596279.1
ENST00000597836.5
ENST00000598068.5
ENST00000598172.1
ENST00000600232.5
ENST00000601576.1
CDS CAA 72 bp CCCCTGGTAGGGGGAGACGGAGCCCTCGCTGTCTCCTaGGTCATCGAATTTCTGGATCTGAGTCTTGAGATG +
Preference number: 6 (lower is better)
Translates to: PLVGGDGALAVS*VIEFLDLSLEM
Trigger: CATCTCAAGACTCAGATCCAGAAATTCGATGACCAAGGAGACAGCGAGGGCTCCGTCTCCCCCTACCAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595573.1
CDS CAA 90 bp AGAAAGCGACCCCTGGTAGGGGGAGACGGAGCCCTCGCTGTCTCCTaGGTCATCGAATTTCTGGATCTGAGTCTTGAGATGCCTCAGTTT +
Preference number: 6 (lower is better)
Translates to: RKRPLVGGDGALAVS*VIEFLDLSLEMPQF
Trigger: AAACTGAGGCATCTCAAGACTCAGATCCAGAAATTCGATGACCAAGGAGACAGCGAGGGCTCCGTCTCCCCCTACCAGGGGTCGCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595573.1
CDS GCA 72 bp AGAAATGCAAGGGACCTGCATCCCCATGCATCCCTCTaGTTGTCCAGGAAGCCAGGATCCATTCGCTTCATC +
Preference number: 6 (lower is better)
Translates to: RNARDLHPHASL*LSRKPGSIRFI
Trigger: GATGAAGCGAATGGATCCTGGCTTCCTGGACAAGCAGAGGGATGCATGGGGATGCAGGTCCCTTGCATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600826.1
CDS CCA 72 bp GCCTCACAGAAGTCTCAGGGGTGCAAGACCAAGCTGTaGGATGCAAGACTCACCATTCGCTTCATCTCAAAC +
Preference number: 6 (lower is better)
Translates to: ASQKSQGCKTKL*DARLTIRFISN
Trigger: GTTTGAGATGAAGCGAATGGTGAGTCTTGCATCCCACAGCTTGGTCTTGCACCCCTGAGACTTCTGTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595769.1
ENST00000596279.1
CDS GCA 72 bp ACAGAAGTCTCAGGGGTGCAAGACCAAGCTGTGGGATaGAAGACTCACCATTCGCTTCATCTCAAACTCCCT +
Preference number: 6 (lower is better)
Translates to: TEVSGVQDQAVG*KTHHSLHLKLP
Trigger: AGGGAGTTTGAGATGAAGCGAATGGTGAGTCTTGCATCCCACAGCTTGGTCTTGCACCCCTGAGACTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595769.1
ENST00000596279.1