RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OBSL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000124006

Ensembl transcript IDs: ENST00000289656.3, ENST00000373873.8, ENST00000373876.5, ENST00000404537.6, ENST00000456147.1, ENST00000462385.1, ENST00000462534.5, ENST00000465149.1, ENST00000465589.1, ENST00000472388.1, ENST00000489804.5, ENST00000491370.1, ENST00000596474.1, ENST00000603926.5, ENST00000604031.5

Found 1115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAAATGCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTaGGGAGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAAT +
Preference number: 1 (lower is better)
Translates to: SNAHRGQVRLAAEAV*GEAKSNGREVGQRN
Trigger: ATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGCATTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
3UTR GCA 90 bp GTCTCAGCCCCATTTTTAAGGAGACTTGGCTCAAAGAGGTTAACTTaGATGAGGTCACATAGGAAACAGAGGGCTCCAGCTTTGGGTGGG +
Preference number: 1 (lower is better)
Translates to: VSAPFLRRLGSKRLT*MRSHRKQRAPALGG
Trigger: CCCACCCAAAGCTGGAGCCCTCTGTTTCCTATGTGACCTCATGCAAGTTAACCTCTTTGAGCCAAGTCTCCTTAAAAATGGGGCTGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
3UTR-3UTR TCA 90 bp GCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGACTTTGGTGGGGGCCTaGGGGACTCCAGGACAGCCA +
Preference number: 2 (lower is better)
Translates to: ALGKLLLGRPWVTFLSDETLVGA*GTPGQP
Trigger: TGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGT...CTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
3UTR-3UTR TCA 90 bp AGGTTAACTTGCATGAGGTCACATAGGAAACAGAGGGCTCCAGCTTTGGGTGGGTGGGACGGCCATGGGTaGCTTTTCTCAGCGATGAGG +
Preference number: 2 (lower is better)
Translates to: RLTCMRSHRKQRAPALGGWDGHG*LFSAMR
Trigger: CCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCA...CCCACCCAAAGCTGGAGCCCTCTGTTTCCTATGTGACCTCATGCAAGTTAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
3UTR-3UTR TCA 90 bp GCCACTGCACCTGGTCTCAGCCCCATTTTTAAGGAGACTTGGCTCAAAGAGGTTGTGTGGGGTGCTGTTTaGCAGCCATCCCTGCTACTT +
Preference number: 2 (lower is better)
Translates to: ATAPGLSPIFKETWLKEVVWGAV*QPSLLL
Trigger: AAGTAGCAGGGATGGCTGTCAAACAGCACCCCACAC...AACCTCTTTGAGCCAAGTCTCCTTAAAAATGGGGCTGAGACCAGGTGCAGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
3UTR-3UTR CCA 90 bp AGGTTAACTTGCATGAGGTCACATAGGAAACAGAGGGCTCCAGCTTTGGGTGGGCTGCTGGGACGGCCATaGGTGACTTTTCTCAGCGAT +
Preference number: 2 (lower is better)
Translates to: RLTCMRSHRKQRAPALGGLLGRP*VTFLSD
Trigger: ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAG...CCCACCCAAAGCTGGAGCCCTCTGTTTCCTATGTGACCTCATGCAAGTTAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
3UTR-3UTR CCA 90 bp GCCACTGCACCTGGTCTCAGCCCCATTTTTAAGGAGACTTGGCTCAAAGAGGTTAGAAAAGTTTTGCTTTaGGCAAGCTGCTGCTGGGAC +
Preference number: 2 (lower is better)
Translates to: ATAPGLSPIFKETWLKEVRKVLL*ASCCWD
Trigger: GTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCT...AACCTCTTTGAGCCAAGTCTCCTTAAAAATGGGGCTGAGACCAGGTGCAGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
3UTR-3UTR CCA 90 bp TGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATCCCCCTGAAGGATGCCCATaGCAAGTCTTTCTGGAGAAT +
Preference number: 2 (lower is better)
Translates to: CGVLFDSHPCYLSGYVYPPEGCP*QVFLEN
Trigger: ATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGG...GGGATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
3UTR-3UTR TCA 90 bp GTTTATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGAACTTTGGTGGGGGCCTaGGGGACTCCAGGACAGCCA +
Preference number: 2 (lower is better)
Translates to: VYSKADLEICNGMQNPHGTLVGA*GTPGQP
Trigger: TGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGT...TCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
3UTR-3UTR TCA 90 bp AATACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTGACTTTTCTCAGCGATaGGGGGCACTTTGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: NTCLKDAHGKSFWRIFVFDFSQR*GALWWG
Trigger: CCCCCACCAAAGTGCCCCTCATCGCTGAGAAAAGTC...AAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
3UTR-3UTR TCA 90 bp TACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTATTGGGACGGCCATGGGTaGCTTTTCTCAGCGATGAGG +
Preference number: 2 (lower is better)
Translates to: YMPEGCPWQVFLENICVYWDGHG*LFSAMR
Trigger: CCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCA...ATAAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
3UTR-3UTR CCA 90 bp GTTTATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGAAGCCAGAAAAGGCTGTaGTGTAGGGTGGGTAATGCA +
Preference number: 2 (lower is better)
Translates to: VYSKADLEICNGMQNPHGSQKRL*CRVGNA
Trigger: TGCATTACCCACCCTACACCACAGCCTTTTCTGGCT...TCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
3UTR-3UTR CCA 90 bp AAGTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCACTGCTGGGACGGCCATaGGTGACTTTTCTCAGCGAT +
Preference number: 2 (lower is better)
Translates to: KSFWRIFVFIAKPTWKYALLGRP*VTFLSD
Trigger: ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAG...TGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
3UTR-3UTR CCA 90 bp GTTAGAAGAGATGTGTCACAAATGACAACCATTCACCAAGCTCTGTGTAAGAATTCCCTGCTACTTAAGTaGGTATGTGTATCCCTAGAA +
Preference number: 2 (lower is better)
Translates to: VRRDVSQMTTIHQALCKNSLLLK*VCVSLE
Trigger: TTCTAGGGATACACATACCCACTTAAGTAGCAGGGA...ATTCTTACACAGAGCTTGGTGAATGGTTGTCATTTGTGACACATCTCTTCTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
3UTR CAA 90 bp TGGCAAGTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTaGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAAGG +
Preference number: 2 (lower is better)
Translates to: WQVFLENICVYSKAD*EICNGMQNPHGLLR
Trigger: CCTTAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGACTTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
3UTR TCA 72 bp TTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTaGCTTTTCTCAGCGATGAGGGGCACTTTGGTGGGG +
Preference number: 3 (lower is better)
Translates to: LLWASCCWDGHG*LFSAMRGTLVG
Trigger: CCCCACCAAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
3UTR-3UTR CAA 90 bp CCACTGCACCTGGTCTCAGCCCCATTTTTAAGGAGACTTGGCTCAAAGAGGTTAAAGAAAAGTTTTGCTTaGGGCAAGCTGCTGCTGGGA +
Preference number: 3 (lower is better)
Translates to: PLHLVSAPFLRRLGSKRLKKSFA*GKLLLG
Trigger: TCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT...TAACCTCTTTGAGCCAAGTCTCCTTAAAAATGGGGCTGAGACCAGGTGCAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
3UTR-3UTR CAA 90 bp AGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAAAGAAAAGTTTTGCTTaGGGCAAGCTGCTGCTGGGA +
Preference number: 3 (lower is better)
Translates to: SKADLEICNGMQNPHGLLKKSFA*GKLLLG
Trigger: TCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT...TAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
3UTR GCA 72 bp TGGGTATGTGTATCCCTAGAATACATGCCTGAAGGATaGCCATGGCAAGTCTTTCTGGAGAATATTTGTGTT +
Preference number: 3 (lower is better)
Translates to: WVCVSLEYMPEG*PWQVFLENICV
Trigger: AACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTATTCTAGGGATACACATACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
3UTR CCA 72 bp AATACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTaGAGAATATTTGTGTTTATAGCAAAGCCGACTTGG +
Preference number: 3 (lower is better)
Translates to: NTCLKDAHGKSF*RIFVFIAKPTW
Trigger: CCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
3UTR-3UTR CAA 90 bp AGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAAGAAAAAGAAAAGTTTaGCTTTGGGCAAGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: SKADLEICNGMQNPHGLLRKRKV*LWASCC
Trigger: GCAGCAGCTTGCCCAAAGCAAAACTTTTCTTTTTCT...TAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
3UTR GCA 72 bp AATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATaGAATGGAATGCAAAATCCACATGGACTTCTAAGG +
Preference number: 3 (lower is better)
Translates to: NICVYSKADLEI*NGMQNPHGLLR
Trigger: CCTTAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGGGTCAGGGTGCGGGTaGGCCCCTCGGCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWGSGCG*APRHPA
Trigger: AGCTGGGTGCCGAGGGGCCCACCCGCACCCTGACCC...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR CCA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGCGGGGGCCCTCGGCATaGAGCTCTAGGCCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWRGPSA*SSRPSP
Trigger: GGGCGAGGGCCTAGAGCTCCATGCCGAGGGCCCCCG...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTGCACGCCGGGGCAGCTaGAGCCGACCAGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAAARRGS*SRPGHR
Trigger: GCGGTGCCCTGGTCGGCTTCAGCTGCCCCGGCGTGC...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAAGCACGCCGGGGCAGCTaGAGCCGACCAGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKARRGS*SRPGHR
Trigger: GCGGTGCCCTGGTCGGCTTCAGCTGCCCCGGCGTGC...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGCACGCCGGGGCAGCTaGAGCCGACCAGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAARRGS*SRPGHR
Trigger: GCGGTGCCCTGGTCGGCTTCAGCTGCCCCGGCGTGC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGCGGTCGCGGTACATaGGGCGGCGGCGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRARGRGT*GGGGPG
Trigger: TCCCGGACCGCCGCCGCCTCATGTACCGCGACCGCG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCGCGTCGGTGGGCAGTaGGGCGGTCAGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPRVGGQ*GGQQQA
Trigger: GGCCTGCTGCTGACCGCCGCACTGCCCACCGACGCG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGCGCACGGCCCCCGCTaGACCCACTCGGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPAHGPR*THSACL
Trigger: GAGACAGGCCGAGTGGGTGCAGCGGGGGCCGTGCGC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCCCCCGTCTGAGGGCTaGGTGGCGGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPPPSEG*VAGSTR
Trigger: CCTGGTGCTGCCCGCCACCCAGCCCTCAGACGGGGG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
68% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGCCCCGCAGCACCCACTaGGATCGAGGCCCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWPRSTH*DRGPVR
Trigger: CCTCACGGGGCCTCGATCCCAGTGGGTGCTGCGGGG...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCCGGCGTCCTCAGGCTaGGCGTGGGGCAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPPASSG*AWGRVR
Trigger: CCTGACCCTGCCCCACGCCCAGCCTGAGGACGCCGG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGGAGCCGGGCACTTGTaGCCGTGCTCCCTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWGAGHL*PCSLPA
Trigger: TGCGGGCAGGGAGCACGGCCACAAGTGCCCGGCTCC...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTGGGCGGGCCCCGCCTaGAAGCGGACTTCACCGGCG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPWAGPA*KRTSPA
Trigger: CGCCGGTGAAGTCCGCTTCCAGGCGGGGCCCGCCCA...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp CTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGGCACTTTGGTGCACGCCGGGGCAGCTaGAGCCGACCAGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: LLLGRPWVTFLSDEGHFGARRGS*SRPGHR
Trigger: GCGGTGCCCTGGTCGGCTTCAGCTGCCCCGGCGTGC...ACCAAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCCAGGACCACGCACTTaGGCTCGGCCTCGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPPGPRT*ARPRRH
Trigger: GTGGCGCCGAGGCCGAGCTCAAGTGCGTGGTCCTGG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGGGATCGAGGCCCCGTaGGGAAGACCGGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAGIEAP*GRPGRP
Trigger: AGGGCGCCCCGGTCTTCCTCACGGGGCCTCGATCCC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp CACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTACGCGGTCGCGGTACATaGGGCGGCGGCGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: HFGGGLRDSRTARKGCGVRGRGT*GGGGPG
Trigger: TCCCGGACCGCCGCCGCCTCATGTACCGCGACCGCG...TACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGCAGCTGCACGGCACTaGGCGTCTGGCCCGCCGAGT +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPAAARH*ASGPPS
Trigger: ACTCGGCGGGCCAGACGCTCAGTGCCGTGCAGCTGC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCGGCCCTCCACGTCCTaGAGGGGCCGTGTGAACCGG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPRPSTS*RGRVNR
Trigger: CCGGTTCACACGGCCCCTGCAGGACGTGGAGGGCCG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCGCGTCGGTGGGCAGTaGGGCGGTCAGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHRVGGQ*GGQQQA
Trigger: GGCCTGCTGCTGACCGCCGCACTGCCCACCGACGCG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGGCCTGCAGCCTGGATaGAGAGGACTCGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPGLQPG*RGLGGG
Trigger: GCCCCCGCCGAGTCCTCTGCATCCAGGCTGCAGGCC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGCGCACGGCCCCCGCTaGACCCACTCGGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHAHGPR*THSACL
Trigger: GAGACAGGCCGAGTGGGTGCAGCGGGGGCCGTGCGC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGGAGAAGGCGGCGCGTaGCGAGGGCCTGGAGCCGGA +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAGEGGA*RGPGAG
Trigger: TCCGGCTCCAGGCCCTCGGCACGCGCCGCCTTCTCC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCCGTCTGAGGGCTaGGTGGCGGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAPPSEG*VAGSTR
Trigger: CCTGGTGCTGCCCGCCACCCAGCCCTCAGACGGGGG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCCCCGCAGCACCCACTaGGATCGAGGCCCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPPRSTH*DRGPVR
Trigger: CCTCACGGGGCCTCGATCCCAGTGGGTGCTGCGGGG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
67% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTCGGCGCGGCCCGGCTaGAGCGCGAAGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHSARPG*SAKWLL
Trigger: CAGCAGCCACTTCGCGCTCCAGCCGGGCCGCGCCGA...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGGGTCAGGGTGCGGGTaGGCCCCTCGGCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHGSGCG*APRHPA
Trigger: AGCTGGGTGCCGAGGGGCCCACCCGCACCCTGACCC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCGGCGTCCTCAGGCTaGGCGTGGGGCAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAPASSG*AWGRVR
Trigger: CCTGACCCTGCCCCACGCCCAGCCTGAGGACGCCGG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCGGGGGCCCTCGGCATaGAGCTCTAGGCCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHRGPSA*SSRPSP
Trigger: GGGCGAGGGCCTAGAGCTCCATGCCGAGGGCCCCCG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGGAGCCGGGCACTTGTaGCCGTGCTCCCTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPGAGHL*PCSLPA
Trigger: TGCGGGCAGGGAGCACGGCCACAAGTGCCCGGCTCC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGCTCCCAGCGCCCCGTaGTCTCGACCTCCGACACGG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPAPSAP*SRPPTR
Trigger: CCGTGTCGGAGGTCGAGACCACGGGGCGCTGGGAGC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCGCACGCCGGGGCAGCTaGAGCCGACCAGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVARRGS*SRPGHR
Trigger: GCGGTGCCCTGGTCGGCTTCAGCTGCCCCGGCGTGC...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp AGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGAAACTCGCCCCCGTCTaGGGGCTGGGTGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SNGREVGQRNVGPKLWGQKLAPV*GLGGGQ
Trigger: CTGCCCGCCACCCAGCCCTCAGACGGGGGCGAGTTT...CTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACAAACTCGCCCCCGTCTaGGGGCTGGGTGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHKLAPV*GLGGGQ
Trigger: CTGCCCGCCACCCAGCCCTCAGACGGGGGCGAGTTT...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCGCGGTCGCGGTACATaGGGCGGCGGCGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVRGRGT*GGGGPG
Trigger: TCCCGGACCGCCGCCGCCTCATGTACCGCGACCGCG...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAAGCAGCTGCACGGCACTaGGCGTCTGGCCCGCCGAGT +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKAAARH*ASGPPS
Trigger: ACTCGGCGGGCCAGACGCTCAGTGCCGTGCAGCTGC...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR TCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTGCAGGGGCCGTGTaGACCGGAGGCGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHPAGAV*TGGGAL
Trigger: AAGAGCCCCGCCTCCGGTTCACACGGCCCCTGCAGG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCCGTCCTCGGGCTaGGCAGCAGGTAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAPPSSG*AAGSTR
Trigger: CCTGGTGCTACCTGCTGCTCAGCCCGAGGACGGGGG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGAAGGAGACACAGCCTaGGTCGGCCAGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPEGDTA*VGQAQA
Trigger: GGCCTGGGCCTGGCCGACTCAGGCTGTGTCTCCTTC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGACTCACGCCTCACGCTaGGCCTGGCCAGGGTGCGAT +
Preference number: 4 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWTHASR*AWPGCD
Trigger: ATCGCACCCTGGCCAGGCTCAGCGTGAGGCGTGAGT...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTCGGCCCTCCACGTCCTaGAGGGGCCGTGTGAACCGG +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAARPSTS*RGRVNR
Trigger: CCGGTTCACACGGCCCCTGCAGGACGTGGAGGGCCG...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp AGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGTCCGAGGCCGCCAGCTaGTGCCCGCCCTTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SNGREVGQRNVGPKLWGQSEAAS*CPPFSH
Trigger: GTGGGAGAAGGGCGGGCAGCAGCTGGCGGCCTCGGA...CTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTCCGAGGCCGCCAGCTaGTGCCCGCCCTTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHSEAAS*CPPFSH
Trigger: GTGGGAGAAGGGCGGGCAGCAGCTGGCGGCCTCGGA...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCATCCGAGGCCGCCAGCTaGTGCCCGCCCTTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRASEAAS*CPPFSH
Trigger: GTGGGAGAAGGGCGGGCAGCAGCTGGCGGCCTCGGA...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTCCCTTCCTGTCGGATaGGGACGCGGGCTCCGGGTC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPSLPVG*GRGLRV
Trigger: GACCCGGAGCCCGCGTCCGCATCCGACAGGAAGGGA...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGCAGCCGTGTGTGGGTaGTGTCCTGGCCGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAAAVCG*CPGRPG
Trigger: GCCAGGCCGGCCAGGACAGCACCCACACACGGCTGC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp GGGCACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTCACCCGCCCCTGGCTTaGCAGTCGCTCCCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: GHFGGGLRDSRTARKGCGHPPLA*QSLPVL
Trigger: AAGGACGGGGAGCGACTGGCAAGCCAGGGGCGGGTG...ACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp TCAAATGCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGCCCCCGTCTGAGGGCTaGGTGGCGGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: SNAHRGQVRLAAEAVWGEPPSEG*VAGSTR
Trigger: CCTGGTGCTGCCCGCCACCCAGCCCTCAGACGGGGG...CTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGCATTTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAAGACCCCCGCGTCGGTaGGCAGTGCGGCGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRARPPRR*AVRRSA
Trigger: TGCTGACCGCCGCACTGCCCACCGACGCGGGGGTCT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCCGCAGCACCCACTaGGATCGAGGCCCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHPRSTH*DRGPVR
Trigger: CCTCACGGGGCCTCGATCCCAGTGGGTGCTGCGGGG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCAAATGCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGTCGGCGCGGCCCGGCTaGAGCGCGAAGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SNAHRGQVRLAAEAVWGESARPG*SAKWLL
Trigger: CAGCAGCCACTTCGCGCTCCAGCCGGGCCGCGCCGA...CTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGCATTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAACGGCACTGAGCGTCTaGCCCGCCGAGTTGCGCGCG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRATALSV*PAELRA
Trigger: CGCGCGCAACTCGGCGGGCCAGACGCTCAGTGCCGT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTAATCCGGCGTCCTCAGGCTaGGCGTGGGGCAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GPEGLQDSQKRLWCRVGNPASSG*AWGRVR
Trigger: CCTGACCCTGCCCCACGCCCAGCCTGAGGACGCCGG...ATTACCCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGCTGGGCCTGCAGCCTaGATGCAGAGGACTCGGCGG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPAGPAA*MQRTRR
Trigger: CCGCCGAGTCCTCTGCATCCAGGCTGCAGGCCCAGC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGCTCCACCTGGGGCCCTaGAGTGACGACGGCCCCATT +
Preference number: 4 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWLHLGP*SDDGPI
Trigger: AATGGGGCCGTCGTCACTCCAGGGCCCCAGGTGGAG...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGGAGCCGGGCACTTGTaGCCGTGCTCCCTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAGAGHL*PCSLPA
Trigger: TGCGGGCAGGGAGCACGGCCACAAGTGCCCGGCTCC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGACAGGCGAGAGTCGTaGGGCAGGGGCTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPDRRES*GRGCPP
Trigger: AGGTGGGCAGCCCCTGCCCCACGACTCTCGCCTGTC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGCTCCCAGCGCCCCGTaGTCTCGACCTCCGACACGG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAAPSAP*SRPPTR
Trigger: CCGTGTCGGAGGTCGAGACCACGGGGCGCTGGGAGC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTGGATGACCAGGCTGTaGGTGGGGCCGTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPWMTRL*VGPWLR
Trigger: GCGCAGCCACGGCCCCACCCACAGCCTGGTCATCCA...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGCGTACAGGGCCCCCTaGCCCGGAGAGGTGCACCAC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHAYRAP*PGEVHH
Trigger: GTGGTGCACCTCTCCGGGCCAGGGGGCCCTGTACGC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAAGCTGCACCCGCCCCTaGCTTGCCAGTCGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRASCTRP*LASRSP
Trigger: CGGGGAGCGACTGGCAAGCCAGGGGCGGGTGCAGCT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCAGCATCCTCTCGGGTaGCCCCTGGAAGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPQHPLG*PLEGPG
Trigger: CCCTGGTCCTTCCAGGGGTCACCCGAGAGGATGCTG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGATTGTGAGGGCAGCTaGGTCCTGCACGCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPDCEGS*VLHAGA
Trigger: TGCCCCGGCGTGCAGGACTCAGCTGCCCTCACAATC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp AAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAAAACTCGCCCCCGTCTaGGGGCTGGGTGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: KQWQGGGTEECGPQTMGAKLAPV*GLGGGQ
Trigger: CTGCCCGCCACCCAGCCCTCAGACGGGGGCGAGTTT...TGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp GAGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACGGGATCGAGGCCCCGTaGGGAAGACCGGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: ERQKAMAGRWDRGMWAPNGIEAP*GRPGRP
Trigger: AGGGCGCCCCGGTCTTCCTCACGGGGCCTCGATCCC...GTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR TCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCGGGATCGAGGCCCCGTaGGGAAGACCGGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVGIEAP*GRPGRP
Trigger: AGGGCGCCCCGGTCTTCCTCACGGGGCCTCGATCCC...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp AGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTCGCGGTCGCGGTACATaGGGCGGCGGCGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: RGKKQWQGGGTEECGPQTRGRGT*GGGGPG
Trigger: TCCCGGACCGCCGCCGCCTCATGTACCGCGACCGCG...AGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR TCA 90 bp CTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGGCACTTTGGTGCAGCTGCACGGCACTaGGCGTCTGGCCCGCCGAGT +
Preference number: 4 (lower is better)
Translates to: LLLGRPWVTFLSDEGHFGAAARH*ASGPPS
Trigger: ACTCGGCGGGCCAGACGCTCAGTGCCGTGCAGCTGC...ACCAAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp GCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGCCTGCAGGGGCCGTGTaGACCGGAGGCGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: ALGKLLLGRPWVTFLSDEPAGAV*TGGGAL
Trigger: AAGAGCCCCGCCTCCGGTTCACACGGCCCCTGCAGG...CTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp GGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTAATCCCCCGTCCTCGGGCTaGGCAGCAGGTAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: GPEGLQDSQKRLWCRVGNPPSSG*AAGSTR
Trigger: CCTGGTGCTACCTGCTGCTCAGCCCGAGGACGGGGG...ATTACCCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGCAGCTGCAGGGCATCTaGTGCCTCCACTTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWQLQGI*CLHFQP
Trigger: GGGCTGGAAGTGGAGGCATCAGATGCCCTGCAGCTG...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR TCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGAAGGAGACACAGCCTaGGTCGGCCAGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHEGDTA*VGQAQA
Trigger: GGCCTGGGCCTGGCCGACTCAGGCTGTGTCTCCTTC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCAGGGCAGCTGAGTCCTaGACGCCGGGGCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPRAAES*TPGQLK
Trigger: CTTCAGCTGCCCCGGCGTGCAGGACTCAGCTGCCCT...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGGGCGGCCCTCCCAGTaGCATTCGATCTCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAGRPSQ*HSISGS
Trigger: CGAGCCCGAGATCGAATGGCACTGGGAGGGCCGCCC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAATCTGGCCCGCCGAGTTaGGCGCGGCGCAGACGTAGA +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKSGPPS*ARRRRR
Trigger: TCTACGTCTGCGCCGCGCGCAACTCGGCGGGCCAGA...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTCTGGCCCGCCGAGTTaGGCGCGGCGCAGACGTAGA +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHSGPPS*ARRRRR
Trigger: TCTACGTCTGCGCCGCGCGCAACTCGGCGGGCCAGA...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGAGCGGGCTGCCGGGTaGACAATCCTCTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPERAAG*TILSGG
Trigger: CCCACCAGAGAGGATTGTGCACCCGGCAGCCCGCTC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp GGGCACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTCCCTCGGCACCCAGCTaGAGGGCATCTGATGCCTCC +
Preference number: 4 (lower is better)
Translates to: GHFGGGLRDSRTARKGCGPSAPS*RASDAS
Trigger: GGAGGCATCAGATGCCCTGCAGCTGGGTGCCGAGGG...ACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACAGGCCCTCGCCCTCCTaGACGGGCCTCCCATTGTGG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHRPSPS*TGLPLW
Trigger: CCACAATGGGAGGCCCGTGCAGGAGGGCGAGGGCCT...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp GCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGCCTGCAGCCTGGATaGAGAGGACTCGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: ALGKLLLGRPWVTFLSDEGLQPG*RGLGGG
Trigger: GCCCCCGCCGAGTCCTCTGCATCCAGGCTGCAGGCC...CTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGCAGGTGTAGAGCCCTaGATGGGCTGGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPAGVEP*MGWACS
Trigger: GCTGCAGGCCCAGCCCATGCAGGGCTCTACACCTGC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTGGGGCTCCGGGGGCTaGTCCAGACTGGCAGGTGTA +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPWGSGG*SRLAGV
Trigger: TACACCTGCCAGTCTGGAGCAGCCCCCGGAGCCCCA...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCGGAGAAGGCGGCGCGTaGCGAGGGCCTGGAGCCGGA +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVGEGGA*RGPGAG
Trigger: TCCGGCTCCAGGCCCTCGGCACGCGCCGCCTTCTCC...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCATCCCTTCCTGTCGGATaGGGACGCGGGCTCCGGGTC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRASLPVG*GRGLRV
Trigger: GACCCGGAGCCCGCGTCCGCATCCGACAGGAAGGGA...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACACCCGCCCCTGGCTTaGCAGTCGCTCCCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAHPPLA*QSLPVL
Trigger: AAGGACGGGGAGCGACTGGCAAGCCAGGGGCGGGTG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAACCGGCCTGCTCCAGCTaGACCCGCCCCTGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQPACSS*TRPWLA
Trigger: GGCAAGCCAGGGGCGGGTGCAGCTGGAGCAGGCCGG...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAATGCACCCGCAGCACCTaGCTGGCCCCGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQCTRST*LAPACS
Trigger: GGAGCAGGCCGGGGCCAGGCAGGTGCTGCGGGTGCA...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCCGCTCCGTGCCCCCTaGACCCGCAGCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVPLRAP*TRSTCL
Trigger: CAGGCAGGTGCTGCGGGTGCAGGGGGCACGGAGCGG...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCAGCGTCCCCGCTCCGTaGCCCCTGCACCCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVSVPAP*PLHPQH
Trigger: GTGCTGCGGGTGCAGGGGGCACGGAGCGGGGACGCT...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp AGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCCGGAGTCCTCGAGCTaGACAGCGGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: SNGREVGQRNVGPKLWGQPESSS*TAGSTR
Trigger: CCTGGTGCTGCCCGCTGTCCAGCTCGAGGACTCCGG...CTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCGGAGTCCTCGAGCTaGACAGCGGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAPESSS*TAGSTR
Trigger: CCTGGTGCTGCCCGCTGTCCAGCTCGAGGACTCCGG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCAAATGCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGCCCCGCAGCACCCACTaGGATCGAGGCCCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: SNAHRGQVRLAAEAVWGEPRSTH*DRGPVR
Trigger: CCTCACGGGGCCTCGATCCCAGTGGGTGCTGCGGGG...CTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGCATTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCACCTGAGACCCAGCTaGGGCCACCTCACAGCGCAG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPHLRPS*GHLTAQ
Trigger: CTGCGCTGTGAGGTGGCCCCAGCTGGGTCTCAGGTG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAACGGGCCTCCCATTGTaGCTCCAGACCACGGGGGCG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRATGLPL*LQTTGA
Trigger: CGCCCCCGTGGTCTGGAGCCACAATGGGAGGCCCGT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACACGGGCCTCCCATTGTaGCTCCAGACCACGGGGGCG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHTGLPL*LQTTGA
Trigger: CGCCCCCGTGGTCTGGAGCCACAATGGGAGGCCCGT...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAACGGGGGCCCTCGGCATaGAGCTCTAGGCCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQRGPSA*SSRPSP
Trigger: GGGCGAGGGCCTAGAGCTCCATGCCGAGGGCCCCCG...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGAGCCCTGCATGGGCTaGGCCTGCAGCCTGGATGCA +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPEPCMG*ACSLDA
Trigger: TGCATCCAGGCTGCAGGCCCAGCCCATGCAGGGCTC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGGTGAAGCTGAGGCTTaGGGCTCCGGGGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHGEAEA*GSGGCS
Trigger: GGAGCAGCCCCCGGAGCCCCAAGCCTCAGCTTCACC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GGGCACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTCTCCACCTGGGGCCCTaGAGTGACGACGGCCCCATT +
Preference number: 4 (lower is better)
Translates to: GHFGGGLRDSRTARKGCGLHLGP*SDDGPI
Trigger: AATGGGGCCGTCGTCACTCCAGGGCCCCAGGTGGAG...ACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTGGGCCATCTCCACCTaGGGCCCTGGAGTGACGACG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPWAIST*GPGVTT
Trigger: CGTCGTCACTCCAGGGCCCCAGGTGGAGATGGCCCA...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGACAGGCGAGAGTCGTaGGGCAGGGGCTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRADRRES*GRGCPP
Trigger: AGGTGGGCAGCCCCTGCCCCACGACTCTCGCCTGTC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGCCCATCCTGGGCCATaGACAGGCGAGAGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPAHPGP*TGESRG
Trigger: CCCACGACTCTCGCCTGTCCATGGCCCAGGATGGGC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAATGGGCGGGCCCCGCCTaGAAGCGGACTTCACCGGCG +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQWAGPA*KRTSPA
Trigger: CGCCGGTGAAGTCCGCTTCCAGGCGGGGCCCGCCCA...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAAGTAGAGCCAGGGACTaGGCGGGCCCCGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRASRARD*AGPAWK
Trigger: CTTCCAGGCGGGGCCCGCCCAGTCCCTGGCTCTACT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACAGTAGAGCCAGGGACTaGGCGGGCCCCGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHSRARD*AGPAWK
Trigger: CTTCCAGGCGGGGCCCGCCCAGTCCCTGGCTCTACT...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTGGATGACCAGGCTGTaGGTGGGGCCGTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHWMTRL*VGPWLR
Trigger: GCGCAGCCACGGCCCCACCCACAGCCTGGTCATCCA...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCTCCGAACCCTCGTCTaGGCTGCCTCGGGAGCTACC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPLRTLV*AASGAT
Trigger: GGTAGCTCCCGAGGCAGCCCAGACGAGGGTTCGGAG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGCTCCAGCCGGTAGATaGATGGGGTCTCGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPAPAGR*MGSREL
Trigger: CAGCTCCCGAGACCCCATTCATCTACCGGCTGGAGC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGATTGTGAGGGCAGCTaGGTCCTGCACGCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRADCEGS*VLHAGA
Trigger: TGCCCCGGCGTGCAGGACTCAGCTGCCCTCACAATC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTAAACTCGCCCCCGTCTaGGGGCTGGGTGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCKLAPV*GLGGGQ
Trigger: CTGCCCGCCACCCAGCCCTCAGACGGGGGCGAGTTT...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCCAGGACCACGCACTTaGGCTCGGCCTCGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVPGPRT*ARPRRH
Trigger: GTGGCGCCGAGGCCGAGCTCAAGTGCGTGGTCCTGG...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCCTGCAGGGGCCGTGTaGACCGGAGGCGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVPAGAV*TGGGAL
Trigger: AAGAGCCCCGCCTCCGGTTCACACGGCCCCTGCAGG...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCCCCCGTCCTCGGGCTaGGCAGCAGGTAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVPPSSG*AAGSTR
Trigger: CCTGGTGCTACCTGCTGCTCAGCCCGAGGACGGGGG...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCATTGTACCAGCGCACCTaGGACCCAGCTGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRALYQRT*DPAGAT
Trigger: GGTGGCCCCAGCTGGGTCTCAGGTGCGCTGGTACAA...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCAGCTGCAGGGCATCTaGTGCCTCCACTTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPQLQGI*CLHFQP
Trigger: GGGCTGGAAGTGGAGGCATCAGATGCCCTGCAGCTG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCATTGCGCAGCCAGGTaGCATCGGCATCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPHCAAR*HRHLVG
Trigger: CCCCACCAGATGCCGATGTCACCTGGCTGCGCAATG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTTGAGTACCAGTCGGTaGCGGTGGCCGTCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPLSTSR*RWPSEW
Trigger: CCACTCGGACGGCCACCGTCACCGACTGGTACTCAA...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCCAGGCCCAGGCCATTaGGTACCAGTCGGTGACGGT +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPPGPGH*VPVGDG
Trigger: ACCGTCACCGACTGGTACTCAATGGCCTGGGCCTGG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp GAGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACCGGCCCTCCACGTCCTaGAGGGGCCGTGTGAACCGG +
Preference number: 4 (lower is better)
Translates to: ERQKAMAGRWDRGMWAPNRPSTS*RGRVNR
Trigger: CCGGTTCACACGGCCCCTGCAGGACGTGGAGGGCCG...GTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCGGCCCTCCACGTCCTaGAGGGGCCGTGTGAACCGG +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCRPSTS*RGRVNR
Trigger: CCGGTTCACACGGCCCCTGCAGGACGTGGAGGGCCG...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAAAGCACGGCAATCCCGTaGTCACGGCCCTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKSTAIP*SRPSTS
Trigger: GGACGTGGAGGGCCGTGAGCACGGGATTGCCGTGCT...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAAGCACGGCAATCCCGTaGTCACGGCCCTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRASTAIP*SRPSTS
Trigger: GGACGTGGAGGGCCGTGAGCACGGGATTGCCGTGCT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAAGGGCAGCTGAGTCCTaGACGCCGGGGCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRARAAES*TPGQLK
Trigger: CTTCAGCTGCCCCGGCGTGCAGGACTCAGCTGCCCT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGCGCGTCGGTGGGCAGTaGGGCGGTCAGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: QKAMAGRWDRGMWAPNYGRVGGQ*GGQQQA
Trigger: GGCCTGCTGCTGACCGCCGCACTGCCCACCGACGCG...CCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTCTCGGGCTCGGGCTTaGCCATCACGTAGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPSRARA*PSRSSG
Trigger: TCCGCTGCTACGTGATGGGCAAGCCCGAGCCCGAGA...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTATCTGGCCCGCCGAGTTaGGCGCGGCGCAGACGTAGA +
Preference number: 4 (lower is better)
Translates to: HFGGGLRDSRTARKGCGVSGPPS*ARRRRR
Trigger: TCTACGTCTGCGCCGCGCGCAACTCGGCGGGCCAGA...TACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCGGGGCTCTTTCACGTaGAGCTGCACGGCACTGAGC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPRGSFT*SCTALS
Trigger: GCTCAGTGCCGTGCAGCTGCACGTGAAAGAGCCCCG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGAGCGGGCTGCCGGGTaGACAATCCTCTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAERAAG*TILSGG
Trigger: CCCACCAGAGAGGATTGTGCACCCGGCAGCCCGCTC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCATCCAGGGAGCGGGCTaGCGGGTGCACAATCCTCTC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPIQGAG*RVHNPL
Trigger: GAGAGGATTGTGCACCCGGCAGCCCGCTCCCTGGAT...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCTCGGCACCCAGCTaGAGGGCATCTGATGCCTCC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHPSAPS*RASDAS
Trigger: GGAGGCATCAGATGCCCTGCAGCTGGGTGCCGAGGG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp GGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTAATAGGCCCTCGCCCTCCTaGACGGGCCTCCCATTGTGG +
Preference number: 4 (lower is better)
Translates to: GPEGLQDSQKRLWCRVGNRPSPS*TGLPLW
Trigger: CCACAATGGGAGGCCCGTGCAGGAGGGCGAGGGCCT...ATTACCCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTGGCCTGCAGCCTGGATaGAGAGGACTCGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCGLQPG*RGLGGG
Trigger: GCCCCCGCCGAGTCCTCTGCATCCAGGCTGCAGGCC...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCATGGGGCTCCGGGGGCTaGTCCAGACTGGCAGGTGTA +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAWGSGG*SRLAGV
Trigger: TACACCTGCCAGTCTGGAGCAGCCCCCGGAGCCCCA...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGCAAAGTCACGGTCCCTaGATCCCCCAGTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWQSHGP*IPQLAA
Trigger: GGCTGCCAACTGGGGGATGCAGGGACCGTGACTTTG...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCATGTGGCCGTGCTCCCTaGCCGCAAAGTCACGGTCCC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRACGRAP*PQSHGP
Trigger: GGGACCGTGACTTTGCGGGCAGGGAGCACGGCCACA...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGCAGCCGTGTGTGGGTaGTGTCCTGGCCGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQAAVCG*CPGRPG
Trigger: GCCAGGCCGGCCAGGACAGCACCCACACACGGCTGC...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTGGTCCCCGCCTGGGGTaGTCCGAACCCTCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCGPRLG*SEPSSG
Trigger: CCCAGACGAGGGTTCGGAGCACCCCAGGCGGGGACC...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCTGGCCCGGAGAGGTaGACCACCAGCTCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAPGPER*TTSSRS
Trigger: GGACCTAGAGCTGGTGGTGCACCTCTCCGGGCCAGG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCACGGAACCAGGCCGTaGGGATGCGGGAGTTGGGTA +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPHGTRP*GCGSWV
Trigger: TACCCAACTCCCGCATCCCCACGGCCTGGTTCCGTG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTGGGGTCTCGGGAGCTaGCTCGGGAGGCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHWGLGS*LGRLPG
Trigger: ACCTGGAAGCCTCCCGAGCCAGCTCCCGAGACCCCA...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCATGGGGTCTCGGGAGCTaGCTCGGGAGGCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAWGLGS*LGRLPG
Trigger: ACCTGGAAGCCTCCCGAGCCAGCTCCCGAGACCCCA...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGCAGCCGGTAGATGAATaGGGTCTCGGGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWQPVDE*GLGSWL
Trigger: GAGCCAGCTCCCGAGACCCCATTCATCTACCGGCTG...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGCCCCAGGTTCCACCTaGCCCTCCGGCTCGTTACTC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHAPGST*PSGSLL
Trigger: GAGTAACGAGCCGGAGGGCCAGGTGGAACCTGGGGC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAAGCACCAGGCGGCGATaGGGCCCCTCATTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRASTRRR*GPSFSS
Trigger: GCTGGAGAATGAGGGGCCCCATCGCCGCCTGGTGCT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTAGACCCCCGCGTCGGTaGGCAGTGCGGCGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCRPPRR*AVRRSA
Trigger: TGCTGACCGCCGCACTGCCCACCGACGCGGGGGTCT...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGGCTGGAGCGCGAAGTaGCTGCTGTCCCACACTTCG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPGWSAK*LLSHTS
Trigger: CGAAGTGTGGGACAGCAGCCACTTCGCGCTCCAGCC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTACGGCACTGAGCGTCTaGCCCGCCGAGTTGCGCGCG +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCTALSV*PAELRA
Trigger: CGCGCGCAACTCGGCGGGCCAGACGCTCAGTGCCGT...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCACCTGAGACCCAGCTaGGGCCACCTCACAGCGCAG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHHLRPS*GHLTAQ
Trigger: CTGCGCTGTGAGGTGGCCCCAGCTGGGTCTCAGGTG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGAGCCCTGCATGGGCTaGGCCTGCAGCCTGGATGCA +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHEPCMG*ACSLDA
Trigger: TGCATCCAGGCTGCAGGCCCAGCCCATGCAGGGCTC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGTGAAGCTGAGGCTTaGGGCTCCGGGGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ALGKLLLGRPWVTFLSDEGEAEA*GSGGCS
Trigger: GGAGCAGCCCCCGGAGCCCCAAGCCTCAGCTTCACC...CTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp CTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGGCACTTTGGTGGTGAAGCTGAGGCTTaGGGCTCCGGGGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LLLGRPWVTFLSDEGHFGGEAEA*GSGGCS
Trigger: GGAGCAGCCCCCGGAGCCCCAAGCCTCAGCTTCACC...ACCAAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTCCACCTGGGGCCCTaGAGTGACGACGGCCCCATT +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRALHLGP*SDDGPI
Trigger: AATGGGGCCGTCGTCACTCCAGGGCCCCAGGTGGAG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTGGGCCATCTCCACCTaGGGCCCTGGAGTGACGACG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHWAIST*GPGVTT
Trigger: CGTCGTCACTCCAGGGCCCCAGGTGGAGATGGCCCA...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGCCCATCCTGGGCCATaGACAGGCGAGAGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHAHPGP*TGESRG
Trigger: CCCACGACTCTCGCCTGTCCATGGCCCAGGATGGGC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCTGCCTCTCCAGCGAGTaGCCCCGCAGCCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVCLSSE*PRSLPC
Trigger: GCAGGGGAGGCTGCGGGGCCACTCGCTGGAGAGGCA...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGGGGGCTCAGCCACCTaGACGGTGAAGCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPGGSAT*TVKLRL
Trigger: AAGCCTCAGCTTCACCGTCCAGGTGGCTGAGCCCCC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGGCATGCATGTGGCCTaGGCTGCTCTGGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPGMHVA*AALADD
Trigger: GTCATCTGCCAGAGCAGCTCAGGCCACATGCATGCC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp AAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCACAGCATCCTCTCGGGTaGCCCCTGGAAGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: KQWQGGGTEECGPQTMGAQHPLG*PLEGPG
Trigger: CCCTGGTCCTTCCAGGGGTCACCCGAGAGGATGCTG...TGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp GGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTAATCAGCATCCTCTCGGGTaGCCCCTGGAAGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: GPEGLQDSQKRLWCRVGNQHPLG*PLEGPG
Trigger: CCCTGGTCCTTCCAGGGGTCACCCGAGAGGATGCTG...ATTACCCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp AGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGGCTCCAGCCGGTAGATaGATGGGGTCTCGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SNGREVGQRNVGPKLWGQAPAGR*MGSREL
Trigger: CAGCTCCCGAGACCCCATTCATCTACCGGCTGGAGC...CTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGCTCCAGCCGGTAGATaGATGGGGTCTCGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHAPAGR*MGSREL
Trigger: CAGCTCCCGAGACCCCATTCATCTACCGGCTGGAGC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGCAGCACCACCCGCTCTaGGGTTGTGAAGGTCAACGA +
Preference number: 4 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWQHHPL*GCEGQR
Trigger: TCGTTGACCTTCACAACCTCAGAGCGGGTGGTGCTG...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTCTCCAGCGACGCACTaGAACTCGCCCCCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHSPATH*NSPPSE
Trigger: CTCAGACGGGGGCGAGTTTCAGTGCGTCGCTGGAGA...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp CAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGCCAGGACCACGCACTTaGGCTCGGCCTCGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: QKAMAGRWDRGMWAPNYGPGPRT*ARPRRH
Trigger: GTGGCGCCGAGGCCGAGCTCAAGTGCGTGGTCCTGG...CCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR TCA 90 bp TTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATCCAGGACCACGCACTTaGGCTCGGCCTCGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: FALGKLLLGRPWVTFLSDPGPRT*ARPRRH
Trigger: GTGGCGCCGAGGCCGAGCTCAAGTGCGTGGTCCTGG...ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGGCAGTAAAGCACCTTaGGCACGAAGCCGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAGSKAP*ARSRRR
Trigger: GCGACGGCGGCTTCGTGCTCAAGGTGCTTTACTGCC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGGCAGTAAAGCACCTTaGGCACGAAGCCGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHGSKAP*ARSRRR
Trigger: GCGACGGCGGCTTCGTGCTCAAGGTGCTTTACTGCC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp CAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGCCTGCAGGGGCCGTGTaGACCGGAGGCGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: QKAMAGRWDRGMWAPNYGPAGAV*TGGGAL
Trigger: AAGAGCCCCGCCTCCGGTTCACACGGCCCCTGCAGG...CCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR TCA 90 bp GGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTAATTTGTACCAGCGCACCTaGGACCCAGCTGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: GPEGLQDSQKRLWCRVGNLYQRT*DPAGAT
Trigger: GGTGGCCCCAGCTGGGTCTCAGGTGCGCTGGTACAA...ATTACCCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR TCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCAGCTGCAGGGCATCTaGTGCCTCCACTTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHQLQGI*CLHFQP
Trigger: GGGCTGGAAGTGGAGGCATCAGATGCCCTGCAGCTG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCGCCCTCGTGGACAGTaGGTGGTGTCAGCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHRPRGQ*VVSAPR
Trigger: TCTCGGAGCTGACACCACTCACTGTCCACGAGGGCG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGCCCTCGTGGACAGTaGGTGGTGTCAGCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRARPRGQ*VVSAPR
Trigger: TCTCGGAGCTGACACCACTCACTGTCCACGAGGGCG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGTCGAACGTCATGGATaGCCAGGCTGTGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAVERHG*PGCGWG
Trigger: GCCCCACCCACAGCCTGGTCATCCATGACGTTCGAC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGTGCCCTCTTCGATCTaGTCGTACTTGCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPVPSSI*SYLRQG
Trigger: GCCCTGCCGCAAGTACGAGCAGATCGAAGAGGGCAC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAACACATCCTCCAGACCTaGCACCAGGCGAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKHILQT*HQASCG
Trigger: CCCACAGCTCGCCTGGTGGCAGGTCTGGAGGATGTG...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACACATCCTCCAGACCTaGCACCAGGCGAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAHILQT*HQASCG
Trigger: CCCACAGCTCGCCTGGTGGCAGGTCTGGAGGATGTG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGCACCGCTGTCCTGGTaGTTGACGGCATGCAGGATG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPAPLSW*LTACRM
Trigger: CATCCTGCATGCCGTCAAGCACCAGGACAGCGGTGC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp AAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAAGGGCAGCTGAGTCCTaGACGCCGGGGCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: KQWQGGGTEECGPQTMGARAAES*TPGQLK
Trigger: CTTCAGCTGCCCCGGCGTGCAGGACTCAGCTGCCCT...TGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCGGGGGTCCACGATGTaGACGGGAGGATCTTGGACA +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPRGSTM*TGGSWT
Trigger: TGTCCAAGATCCTCCCGTGCACATCGTGGACCCCCG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTCCAGGCGCACGGCTaGCACATACACCTTGCCGCT +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRALQAHG*HIHLAA
Trigger: AGCGGCAAGGTGTATGTGGCAGCCGTGCGCCTGGAG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCTCCAGGCGCACGGCTaGCACATACACCTTGCCGCT +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHLQAHG*HIHLAA
Trigger: AGCGGCAAGGTGTATGTGGCAGCCGTGCGCCTGGAG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCAGCGGAACTTGGCGTaGTTGCCCTCGTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPQRNLA*LPSFTQ
Trigger: CTGGGTGAACGAGGGCAAGCACGCCAAGTTCCGCTG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAATCTCGGGCTCGGGCTTaGCCATCACGTAGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKSRARA*PSRSSG
Trigger: TCCGCTGCTACGTGATGGGCAAGCCCGAGCCCGAGA...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTCTCGGGCTCGGGCTTaGCCATCACGTAGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHSRARA*PSRSSG
Trigger: TCCGCTGCTACGTGATGGGCAAGCCCGAGCCCGAGA...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCGGCCCTCCCAGTaGCATTCGATCTCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQGRPSQ*HSISGS
Trigger: CGAGCCCGAGATCGAATGGCACTGGGAGGGCCGCCC...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAATCTGGCCCGCCGAGTTaGGCGCGGCGCAGACGTAGA +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQSGPPS*ARRRRR
Trigger: TCTACGTCTGCGCCGCGCGCAACTCGGCGGGCCAGA...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTCGGGGCTCTTTCACGTaGAGCTGCACGGCACTGAGC +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAARGSFT*SCTALS
Trigger: GCTCAGTGCCGTGCAGCTGCACGTGAAAGAGCCCCG...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR GCA 90 bp GCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGAGCGGGCTGCCGGGTaGACAATCCTCTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ALGKLLLGRPWVTFLSDEERAAG*TILSGG
Trigger: CCCACCAGAGAGGATTGTGCACCCGGCAGCCCGCTC...CTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR GCA 90 bp GGGCACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTCCTGGAGCCCCAAAATaGAGATCCAGGGAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: GHFGGGLRDSRTARKGCGPGAPK*RSRERA
Trigger: AGCCCGCTCCCTGGATCTGCATTTTGGGGCTCCAGG...ACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR GCA 90 bp TTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGGCCTGCAGCCTGGATaGAGAGGACTCGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: FALGKLLLGRPWVTFLSDGLQPG*RGLGGG
Trigger: GCCCCCGCCGAGTCCTCTGCATCCAGGCTGCAGGCC...ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp CACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTATGTGGCCGTGCTCCCTaGCCGCAAAGTCACGGTCCC +
Preference number: 4 (lower is better)
Translates to: HFGGGLRDSRTARKGCGVCGRAP*PQSHGP
Trigger: GGGACCGTGACTTTGCGGGCAGGGAGCACGGCCACA...TACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGGGCACTTGTGGCCGTaGTCCCTGCCCGCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHGHLWP*SLPAKS
Trigger: TGACTTTGCGGGCAGGGAGCACGGCCACAAGTGCCC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGGGCACTTGTGGCCGTaGTCCCTGCCCGCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAGHLWP*SLPAKS
Trigger: TGACTTTGCGGGCAGGGAGCACGGCCACAAGTGCCC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTCTGCCCGCACATCCTaGAACCGCCGTAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPSARTS*NRRRNS
Trigger: GCTGTTCCTACGGCGGTTGCAGGATGTGCGGGCAGA...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCAAGAGGCGGTGGATGTaGCCATCCTGGGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPKRRWM*PSWAMD
Trigger: GTCCATGGCCCAGGATGGGCACATCCACCGCCTCTT...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp GGGCACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTAAGAGGCGGTGGATGTaGCCATCCTGGGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: GHFGGGLRDSRTARKGCGKRRWM*PSWAMD
Trigger: GTCCATGGCCCAGGATGGGCACATCCACCGCCTCTT...ACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTCACGGAACCAGGCCGTaGGGATGCGGGAGTTGGGTA +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAAHGTRP*GCGSWV
Trigger: TACCCAACTCCCGCATCCCCACGGCCTGGTTCCGTG...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAACACGGAACCAGGCCGTaGGGATGCGGGAGTTGGGTA +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKHGTRP*GCGSWV
Trigger: TACCCAACTCCCGCATCCCCACGGCCTGGTTCCGTG...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCACGGAACCAGGCCGTaGGGATGCGGGAGTTGGGTA +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHHGTRP*GCGSWV
Trigger: TACCCAACTCCCGCATCCCCACGGCCTGGTTCCGTG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTGGCCTGAGCTGCTCTaGCAGATGACCGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHWPELL*QMTGSS
Trigger: GGAGCTGCCGGTCATCTGCCAGAGCAGCTCAGGCCA...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCTCTCGGGTGACCCCTaGAAGGACCAGGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPLSGDP*KDQGMH
Trigger: ATGCATGCCCTGGTCCTTCCAGGGGTCACCCGAGAG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp AAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCATGGGGTCTCGGGAGCTaGCTCGGGAGGCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KQWQGGGTEECGPQTMGAWGLGS*LGRLPG
Trigger: ACCTGGAAGCCTCCCGAGCCAGCTCCCGAGACCCCA...TGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCAGCCGGTAGATGAATaGGGTCTCGGGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPQPVDE*GLGSWL
Trigger: GAGCCAGCTCCCGAGACCCCATTCATCTACCGGCTG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAACCGTGGAACACCACGTaGGGACTACGGCCATGTCCG +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKPWNTT*GLRPCP
Trigger: CGGACATGGCCGTAGTCCCCACGTGGTGTTCCACGG...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCGTGGAACACCACGTaGGGACTACGGCCATGTCCG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAPWNTT*GLRPCP
Trigger: CGGACATGGCCGTAGTCCCCACGTGGTGTTCCACGG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTAGGGCACCGCTGTCCTaGTGCTTGACGGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAARAPLS*CLTACR
Trigger: CCTGCATGCCGTCAAGCACCAGGACAGCGGTGCCCT...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAAGGGCACCGCTGTCCTaGTGCTTGACGGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRARAPLS*CLTACR
Trigger: CCTGCATGCCGTCAAGCACCAGGACAGCGGTGCCCT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp AAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAAGCACCAGGCGGCGATaGGGCCCCTCATTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KQWQGGGTEECGPQTMGASTRRR*GPSFSS
Trigger: GCTGGAGAATGAGGGGCCCCATCGCCGCCTGGTGCT...TGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTCCTCCTCTCCATCCTTaGTCCAGCGCACCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAAPPLHP*SSAPLP
Trigger: GGGCAGAGGTGCGCTGGACCAAGGATGGAGAGGAGG...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTCCTCTCCATCCTTaGTCCAGCGCACCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHPPLHP*SSAPLP
Trigger: GGGCAGAGGTGCGCTGGACCAAGGATGGAGAGGAGG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCGGAGTCCTCGAGCTaGACAGCGGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCPESSS*TAGSTR
Trigger: CCTGGTGCTGCCCGCTGTCCAGCTCGAGGACTCCGG...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp AGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTAGACCCCCGCGTCGGTaGGCAGTGCGGCGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RGKKQWQGGGTEECGPQTRPPRR*AVRRSA
Trigger: TGCTGACCGCCGCACTGCCCACCGACGCGGGGGTCT...AGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR CCA 90 bp AAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGACGGCACTGAGCGTCTaGCCCGCCGAGTTGCGCGCG +
Preference number: 4 (lower is better)
Translates to: KKQWQGGGTEECGPQTMGTALSV*PAELRA
Trigger: CGCGCGCAACTCGGCGGGCCAGACGCTCAGTGCCGT...CCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR CCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCGCTGGGCCTGCAGCCTaGATGCAGAGGACTCGGCGG +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVAGPAA*MQRTRR
Trigger: CCGCCGAGTCCTCTGCATCCAGGCTGCAGGCCCAGC...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp GGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTAATGAGCCCTGCATGGGCTaGGCCTGCAGCCTGGATGCA +
Preference number: 4 (lower is better)
Translates to: GPEGLQDSQKRLWCRVGNEPCMG*ACSLDA
Trigger: TGCATCCAGGCTGCAGGCCCAGCCCATGCAGGGCTC...ATTACCCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTGGTGAAGCTGAGGCTTaGGGCTCCGGGGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCGEAEA*GSGGCS
Trigger: GGAGCAGCCCCCGGAGCCCCAAGCCTCAGCTTCACC...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGTCTGTCTCTCGAACATaGAGCCGGGCACTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWSVSRT*SRALVA
Trigger: GGCCACAAGTGCCCGGCTCCATGTTCGAGAGACAGA...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTGGATGAAGAGGCGGTaGATGTGCCCATCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPWMKRR*MCPSWA
Trigger: GGCCCAGGATGGGCACATCCACCGCCTCTTCATCCA...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCCGGTCACACCTTCCTaGGACAGCTCCAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPPVTPS*DSSSWK
Trigger: CTTCCAGCTGGAGCTGTCCCAGGAAGGTGTGACCGG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGTGGCCCCCGCACGATaGTCACTGGGACCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHVAPAR*SLGPLS
Trigger: TGAGAGAGGTCCCAGTGACCATCGTGCGGGGGCCAC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGCGTACAGGGCCCCCTaGCCCGGAGAGGTGCACCAC +
Preference number: 4 (lower is better)
Translates to: FALGKLLLGRPWVTFLSDAYRAP*PGEVHH
Trigger: GTGGTGCACCTCTCCGGGCCAGGGGGCCCTGTACGC...ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAAGGCATGCATGTGGCCTaGGCTGCTCTGGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKGMHVA*AALADD
Trigger: GTCATCTGCCAGAGCAGCTCAGGCCACATGCATGCC...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGGCATGCATGTGGCCTaGGCTGCTCTGGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAGMHVA*AALADD
Trigger: GTCATCTGCCAGAGCAGCTCAGGCCACATGCATGCC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAGCATCCTCTCGGGTaGCCCCTGGAAGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVQHPLG*PLEGPG
Trigger: CCCTGGTCCTTCCAGGGGTCACCCGAGAGGATGCTG...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp AAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTCCAGCCGGTAGATaGATGGGGTCTCGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KQWQGGGTEECGPQTMGAAPAGR*MGSREL
Trigger: CAGCTCCCGAGACCCCATTCATCTACCGGCTGGAGC...TGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAATACGGCCATGTCCGCTaGCTGTGCAGATGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKYGHVR*LCRCGS
Trigger: GCTTCCGCATCTGCACAGTCAGCGGACATGGCCGTA...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCATACGGCCATGTCCGCTaGCTGTGCAGATGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAYGHVR*LCRCGS
Trigger: GCTTCCGCATCTGCACAGTCAGCGGACATGGCCGTA...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGCTGTGGGCACAAGGTaGGCAGAACCGTGGAACACC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAAVGTR*AEPWNT
Trigger: GGTGTTCCACGGTTCTGCTCACCTTGTGCCCACAGC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp GAGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACGATTGTGAGGGCAGCTaGGTCCTGCACGCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: ERQKAMAGRWDRGMWAPNDCEGS*VLHAGA
Trigger: TGCCCCGGCGTGCAGGACTCAGCTGCCCTCACAATC...GTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCCCGCTCTGAGGTTGTaGAGGTCAACGACACCCTGT +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPPALRL*RSTTPC
Trigger: ACAGGGTGTCGTTGACCTTCACAACCTCAGAGCGGG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCAGCACCACCCGCTCTaGGGTTGTGAAGGTCAACGA +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPQHHPL*GCEGQR
Trigger: TCGTTGACCTTCACAACCTCAGAGCGGGTGGTGCTG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCGGGAAGTCCACCCTTaGGAGCTCACAAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPREVHP*ELTSQH
Trigger: GTGCTGACTTGTGAGCTCTCAAGGGTGGACTTCCCG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp GCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGTCTCCAGCGACGCACTaGAACTCGCCCCCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: ALGKLLLGRPWVTFLSDESPATH*NSPPSE
Trigger: CTCAGACGGGGGCGAGTTTCAGTGCGTCGCTGGAGA...CTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp AAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGGCAGTAAAGCACCTTaGGCACGAAGCCGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: KQWQGGGTEECGPQTMGAGSKAP*ARSRRR
Trigger: GCGACGGCGGCTTCGTGCTCAAGGTGCTTTACTGCC...TGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR TCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTTTGTACCAGCGCACCTaGGACCCAGCTGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCLYQRT*DPAGAT
Trigger: GGTGGCCCCAGCTGGGTCTCAGGTGCGCTGGTACAA...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp CACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTACATTGCGCAGCCAGGTaGCATCGGCATCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: HFGGGLRDSRTARKGCGVHCAAR*HRHLVG
Trigger: CCCCACCAGATGCCGATGTCACCTGGCTGCGCAATG...TACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGGACCTCTCTCACAATaGGTCTGGCTGCGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHGPLSQ*VWLRSA
Trigger: TGCGCTGCGCAGCCAGACTCATTGTGAGAGAGGTCC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGTGGCTCTTCCACGCTaGCAAGGAAGATGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPVALPR*QGRCGC
Trigger: ACAGCCGCATCTTCCTTGTCAGCGTGGAAGAGCCAC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTGTGGGGTGCTGTTTaGCAGCCATCCCTGCTACTT +
Preference number: 4 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWVWGAV*QPSLLL
Trigger: AAGTAGCAGGGATGGCTGTCAAACAGCACCCCACAC...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAAGTGCCCTCTTCGATCTaGTCGTACTTGCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKVPSSI*SYLRQG
Trigger: GCCCTGCCGCAAGTACGAGCAGATCGAAGAGGGCAC...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGTGCCCTCTTCGATCTaGTCGTACTTGCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAVPSSI*SYLRQG
Trigger: GCCCTGCCGCAAGTACGAGCAGATCGAAGAGGGCAC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp AAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCACACATCCTCCAGACCTaGCACCAGGCGAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: KQWQGGGTEECGPQTMGAHILQT*HQASCG
Trigger: CCCACAGCTCGCCTGGTGGCAGGTCTGGAGGATGTG...TGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp AGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGGCACCGCTGTCCTGGTaGTTGACGGCATGCAGGATG +
Preference number: 4 (lower is better)
Translates to: SNGREVGQRNVGPKLWGQAPLSW*LTACRM
Trigger: CATCCTGCATGCCGTCAAGCACCAGGACAGCGGTGC...CTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAACGGGGGTCCACGATGTaGACGGGAGGATCTTGGACA +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKRGSTM*TGGSWT
Trigger: TGTCCAAGATCCTCCCGTGCACATCGTGGACCCCCG...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCGGGGGTCCACGATGTaGACGGGAGGATCTTGGACA +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHRGSTM*TGGSWT
Trigger: TGTCCAAGATCCTCCCGTGCACATCGTGGACCCCCG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp AAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCACTCCAGGCGCACGGCTaGCACATACACCTTGCCGCT +
Preference number: 4 (lower is better)
Translates to: KQWQGGGTEECGPQTMGALQAHG*HIHLAA
Trigger: AGCGGCAAGGTGTATGTGGCAGCCGTGCGCCTGGAG...TGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACACAGTGTCTTCCTTCTaGAGGAGCAGCGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHTVSSF*RSSAGL
Trigger: GAGCCCCGCGCTGCTCCTGCAGAAGGAAGACACTGT...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp GCCACTGCACCTGGTCTCAGCCCCATTTTTAAGGAGACTTGGCTCAAAGAGGTTCGCGTCGGTGGGCAGTaGGGCGGTCAGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: ATAPGLSPIFKETWLKEVRVGGQ*GGQQQA
Trigger: GGCCTGCTGCTGACCGCCGCACTGCCCACCGACGCG...AACCTCTTTGAGCCAAGTCTCCTTAAAAATGGGGCTGAGACCAGGTGCAGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGGAGCGCGAAGTGGCTaGTGTCCCACACTTCGTCCA +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAGARSG*CPTLRP
Trigger: TGGACGAAGTGTGGGACAGCAGCCACTTCGCGCTCC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp AGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCAGCGGAACTTGGCGTaGTTGCCCTCGTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: SNGREVGQRNVGPKLWGQQRNLA*LPSFTQ
Trigger: CTGGGTGAACGAGGGCAAGCACGCCAAGTTCCGCTG...CTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCAGCGGAACTTGGCGTaGTTGCCCTCGTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHQRNLA*LPSFTQ
Trigger: CTGGGTGAACGAGGGCAAGCACGCCAAGTTCCGCTG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGGCGGCCCTCCCAGTaGCATTCGATCTCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: QKAMAGRWDRGMWAPNYGGRPSQ*HSISGS
Trigger: CGAGCCCGAGATCGAATGGCACTGGGAGGGCCGCCC...CCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR GCA 90 bp GGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTAATATCCAGGGAGCGGGCTaGCGGGTGCACAATCCTCTC +
Preference number: 4 (lower is better)
Translates to: GPEGLQDSQKRLWCRVGNIQGAG*RVHNPL
Trigger: GAGAGGATTGTGCACCCGGCAGCCCGCTCCCTGGAT...ATTACCCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTGGAGCCCCAAAATaGAGATCCAGGGAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHPGAPK*RSRERA
Trigger: AGCCCGCTCCCTGGATCTGCATTTTGGGGCTCCAGG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCTGGAGCCCCAAAATaGAGATCCAGGGAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAPGAPK*RSRERA
Trigger: AGCCCGCTCCCTGGATCTGCATTTTGGGGCTCCAGG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCCTCGGCACCCAGCTaGAGGGCATCTGATGCCTCC +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCPSAPS*RASDAS
Trigger: GGAGGCATCAGATGCCCTGCAGCTGGGTGCCGAGGG...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCGCAGGTGTAGAGCCCTaGATGGGCTGGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVAGVEP*MGWACS
Trigger: GCTGCAGGCCCAGCCCATGCAGGGCTCTACACCTGC...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCAAAGTCACGGTCCCTaGATCCCCCAGTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHQSHGP*IPQLAA
Trigger: GGCTGCCAACTGGGGGATGCAGGGACCGTGACTTTG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACAAAGTCACGGTCCCTaGATCCCCCAGTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAQSHGP*IPQLAA
Trigger: GGCTGCCAACTGGGGGATGCAGGGACCGTGACTTTG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCTGTGGCCGTGCTCCCTaGCCGCAAAGTCACGGTCCC +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVCGRAP*PQSHGP
Trigger: GGGACCGTGACTTTGCGGGCAGGGAGCACGGCCACA...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp CACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGCACTTGTGGCCGTaGTCCCTGCCCGCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: HFGGGLRDSRTARKGCGVGHLWP*SLPAKS
Trigger: TGACTTTGCGGGCAGGGAGCACGGCCACAAGTGCCC...TACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAATCCTGGCCTTCCTCTaGCCGCACATCCTGCAACCG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAILAFL*PHILQP
Trigger: CGGTTGCAGGATGTGCGGGCAGAGGAAGGCCAGGAT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAAAGAGGCGGTGGATGTaGCCATCCTGGGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAKRRWM*PSWAMD
Trigger: GTCCATGGCCCAGGATGGGCACATCCACCGCCTCTT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACACAATGAGTCTGGCTaGGCAGCGCAGGGAATCCGC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAHNESG*AAQGIR
Trigger: GCGGATTCCCTGCGCTGCGCAGCCAGACTCATTGTG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCACAATGAGTCTGGCTaGGCAGCGCAGGGAATCCGC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHHNESG*AAQGIR
Trigger: GCGGATTCCCTGCGCTGCGCAGCCAGACTCATTGTG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTAACCCTCGTCTGGGCTaGCTCGGGAGCTACCACCCG +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCNPRLG*LGSYHP
Trigger: CGGGTGGTAGCTCCCGAGGCAGCCCAGACGAGGGTT...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAAACCAGGGCATGCATGTaGCCTGAGCTGCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKTRACM*PELLWQ
Trigger: CTGCCAGAGCAGCTCAGGCCACATGCATGCCCTGGT...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACACCAGGGCATGCATGTaGCCTGAGCTGCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHTRACM*PELLWQ
Trigger: CTGCCAGAGCAGCTCAGGCCACATGCATGCCCTGGT...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTCTCTCGGGTGACCCCTaGAAGGACCAGGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAALSGDP*KDQGMH
Trigger: ATGCATGCCCTGGTCCTTCCAGGGGTCACCCGAGAG...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTCTCGGGTGACCCCTaGAAGGACCAGGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRALSGDP*KDQGMH
Trigger: ATGCATGCCCTGGTCCTTCCAGGGGTCACCCGAGAG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp AGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCAGCCGGTAGATGAATaGGGTCTCGGGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SNGREVGQRNVGPKLWGQQPVDE*GLGSWL
Trigger: GAGCCAGCTCCCGAGACCCCATTCATCTACCGGCTG...CTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp TCAAATGCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGCCGTGGAACACCACGTaGGGACTACGGCCATGTCCG +
Preference number: 4 (lower is better)
Translates to: SNAHRGQVRLAAEAVWGEPWNTT*GLRPCP
Trigger: CGGACATGGCCGTAGTCCCCACGTGGTGTTCCACGG...CTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGCATTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTCCACCAGGCGAGCTGTaGGCACAAGGTGAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAAPPGEL*AQGEQN
Trigger: GTTCTGCTCACCTTGTGCCCACAGCTCGCCTGGTGG...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCACCAGGCGAGCTGTaGGCACAAGGTGAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHPPGEL*AQGEQN
Trigger: GTTCTGCTCACCTTGTGCCCACAGCTCGCCTGGTGG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGCCCCAGGTTCCACCTaGCCCTCCGGCTCGTTACTC +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQAPGST*PSGSLL
Trigger: GAGTAACGAGCCGGAGGGCCAGGTGGAACCTGGGGC...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp AAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAAGGGCACCGCTGTCCTaGTGCTTGACGGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: KQWQGGGTEECGPQTMGARAPLS*CLTACR
Trigger: CCTGCATGCCGTCAAGCACCAGGACAGCGGTGCCCT...TGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAAGCACCAGGCGGCGATaGGGCCCCTCATTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQSTRRR*GPSFSS
Trigger: GCTGGAGAATGAGGGGCCCCATCGCCGCCTGGTGCT...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp AGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTCCGGAGTCCTCGAGCTaGACAGCGGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: RGKKQWQGGGTEECGPQTPESSS*TAGSTR
Trigger: CCTGGTGCTGCCCGCTGTCCAGCTCGAGGACTCCGG...AGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp AGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGGCAATGGCAGGGAGGTaGGACAGAGGAATGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SNGREVGQRNVGPKLWGQAMAGR*DRGMWA
Trigger: GGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGC...CTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCGTAGCAGCGGAACTTaGCGTGCTTGCCCTCGTTCA +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPRSSGT*RACPRS
Trigger: TGAACGAGGGCAAGCACGCCAAGTTCCGCTGCTACG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGAGAGCCCACGATCCTTaGCCTGGCAGTAAAGCACCT +
Preference number: 4 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWRAHDP*PGSKAP
Trigger: AGGTGCTTTACTGCCAGGCCAAGGATCGTGGGCTCT...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCAGCTCCACGCGCCCTaGAGCCCCAAAATGCAGATC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHQLHAP*SPKMQI
Trigger: GATCTGCATTTTGGGGCTCCAGGGCGCGTGGAGCTG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GCCACTGCACCTGGTCTCAGCCCCATTTTTAAGGAGACTTGGCTCAAAGAGGTTGGGTCAGGGTGCGGGTaGGCCCCTCGGCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: ATAPGLSPIFKETWLKEVGSGCG*APRHPA
Trigger: AGCTGGGTGCCGAGGGGCCCACCCGCACCCTGACCC...AACCTCTTTGAGCCAAGTCTCCTTAAAAATGGGGCTGAGACCAGGTGCAGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp AAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGGCACTTTGAGCCCTGCATGGGCTaGGCCTGCAGCCTGGATGCA +
Preference number: 4 (lower is better)
Translates to: KLLLGRPWVTFLSDEGHFEPCMG*ACSLDA
Trigger: TGCATCCAGGCTGCAGGCCCAGCCCATGCAGGGCTC...AAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCAGCTTCACCAGCAGTaGCTCAGCCACCTGGACGGT +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHQLHQQ*LSHLDG
Trigger: ACCGTCCAGGTGGCTGAGCCACTGCTGGTGAAGCTG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373876.5
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCTCGTGGACAGTGAGTaGTGTCAGCTCCGAGACCAG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPLVDSE*CQLRDQ
Trigger: CTGGTCTCGGAGCTGACACCACTCACTGTCCACGAG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGCATCATCGCCCTCGTaGACAGTGAGTGGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPASSPS*TVSGVS
Trigger: GCTGACACCACTCACTGTCCACGAGGGCGATGATGC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCTCCACCTGGGGCCCTaGAGTGACGACGGCCCCATT +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCLHLGP*SDDGPI
Trigger: AATGGGGCCGTCGTCACTCCAGGGCCCCAGGTGGAG...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCCTGCATCCCCCAGTTaGCAGCCTCGCAAGGTTAAG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPPASPS*QPRKVK
Trigger: CTTAACCTTGCGAGGCTGCCAACTGGGGGATGCAGG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTCGAGACACACATCCTaGCCTTCCTCTGCCCGCACA +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPSRHTS*PSSART
Trigger: TGTGCGGGCAGAGGAAGGCCAGGATGTGTGTCTCGA...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTGGATGTGCCCATCCTaGGCCATGGACAGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHWMCPS*AMDRRE
Trigger: CTCTCGCCTGTCCATGGCCCAGGATGGGCACATCCA...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCGGTCACACCTTCCTaGGACAGCTCCAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAPVTPS*DSSSWK
Trigger: CTTCCAGCTGGAGCTGTCCCAGGAAGGTGTGACCGG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCTGTGGGTGGGGCCGTaGCTGCGCATCTCATACTTA +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPLWVGP*LRISYL
Trigger: TAAGTATGAGATGCGCAGCCACGGCCCCACCCACAG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGGCACCCGCCTGGCCTaGTTAGGTTCTCCTAGTTGC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAGTRLA*LGSPSC
Trigger: GCAACTAGGAGAACCTAACCAGGCCAGGCGGGTGCC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGGCACCCGCCTGGCCTaGTTAGGTTCTCCTAGTTGC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHGTRLA*LGSPSC
Trigger: GCAACTAGGAGAACCTAACCAGGCCAGGCGGGTGCC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGCTGCTGGGACGGCCATaGGTGACTTTTCTCAGCGAT +
Preference number: 4 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWLLGRP*VTFLSD
Trigger: ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAG...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp AGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTCAGCATCCTCTCGGGTaGCCCCTGGAAGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: RGKKQWQGGGTEECGPQTQHPLG*PLEGPG
Trigger: CCCTGGTCCTTCCAGGGGTCACCCGAGAGGATGCTG...AGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp TCAAATGCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCTGTGGGCACAAGGTaGGCAGAACCGTGGAACACC +
Preference number: 4 (lower is better)
Translates to: SNAHRGQVRLAAEAVWGEAVGTR*AEPWNT
Trigger: GGTGTTCCACGGTTCTGCTCACCTTGTGCCCACAGC...CTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGCATTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTACCAGGTACCCTGGATaGTGGTGGAGAGATCGAGGG +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAATRYPG*WWRDRG
Trigger: CCCTCGATCTCTCCACCATCATCCAGGGTACCTGGT...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAAACCAGGTACCCTGGATaGTGGTGGAGAGATCGAGGG +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKTRYPG*WWRDRG
Trigger: CCCTCGATCTCTCCACCATCATCCAGGGTACCTGGT...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAACCAGGTACCCTGGATaGTGGTGGAGAGATCGAGGG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRATRYPG*WWRDRG
Trigger: CCCTCGATCTCTCCACCATCATCCAGGGTACCTGGT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACACCAGGTACCCTGGATaGTGGTGGAGAGATCGAGGG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHTRYPG*WWRDRG
Trigger: CCCTCGATCTCTCCACCATCATCCAGGGTACCTGGT...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp AAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGATTGTGAGGGCAGCTaGGTCCTGCACGCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: KKQWQGGGTEECGPQTMGDCEGS*VLHAGA
Trigger: TGCCCCGGCGTGCAGGACTCAGCTGCCCTCACAATC...CCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGCTCTGAGGTTGTaGAGGTCAACGACACCCTGT +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAPALRL*RSTTPC
Trigger: ACAGGGTGTCGTTGACCTTCACAACCTCAGAGCGGG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAACAGCACCACCCGCTCTaGGGTTGTGAAGGTCAACGA +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKQHHPL*GCEGQR
Trigger: TCGTTGACCTTCACAACCTCAGAGCGGGTGGTGCTG...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCAGCACCACCCGCTCTaGGGTTGTGAAGGTCAACGA +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHQHHPL*GCEGQR
Trigger: TCGTTGACCTTCACAACCTCAGAGCGGGTGGTGCTG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp AGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCGGGAAGTCCACCCTTaGGAGCTCACAAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: SNGREVGQRNVGPKLWGQREVHP*ELTSQH
Trigger: GTGCTGACTTGTGAGCTCTCAAGGGTGGACTTCCCG...CTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAACGGGAAGTCCACCCTTaGGAGCTCACAAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKREVHP*ELTSQH
Trigger: GTGCTGACTTGTGAGCTCTCAAGGGTGGACTTCCCG...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGAGGATCTTGGACAGTaGCGCCGAAGAAGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAEDLGQ*RRRRPR
Trigger: TCTCGGCCTTCTTCGGCGTCACTGTCCAAGATCCTC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAATCTCCAGCGACGCACTaGAACTCGCCCCCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQSPATH*NSPPSE
Trigger: CTCAGACGGGGGCGAGTTTCAGTGCGTCGCTGGAGA...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCATCGCGAGGGTATATaGTCCGCACTGGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHHREGI*SALGVL
Trigger: CAGAACCCCCAGTGCGGATCATATACCCTCGCGATG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACATCGCGAGGGTATATaGTCCGCACTGGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAHREGI*SALGVL
Trigger: CAGAACCCCCAGTGCGGATCATATACCCTCGCGATG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCATTGCGCAGCCAGGTaGCATCGGCATCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCHCAAR*HRHLVG
Trigger: CCCCACCAGATGCCGATGTCACCTGGCTGCGCAATG...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCGTCCGAGTGGATGTaGCACTTGGGTCCTGGATAC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAPSEWM*HLGPGY
Trigger: GTATCCAGGACCCAAGTGTCACATCCACTCGGACGG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTTTGAGTACCAGTCGGTaGCGGTGGCCGTCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCLSTSR*RWPSEW
Trigger: CCACTCGGACGGCCACCGTCACCGACTGGTACTCAA...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGCAGGGAATCCGCTGTaGAGGAGACACAGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHAGNPL*RRHSLS
Trigger: ACTCAGGCTGTGTCTCCTTCACAGCGGATTCCCTGC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCGTCGAACGTCATGGATaGCCAGGCTGTGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVVERHG*PGCGWG
Trigger: GCCCCACCCACAGCCTGGTCATCCATGACGTTCGAC...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp AGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTAGCACGGCAATCCCGTaGTCACGGCCCTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: RGKKQWQGGGTEECGPQTSTAIP*SRPSTS
Trigger: GGACGTGGAGGGCCGTGAGCACGGGATTGCCGTGCT...AGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp TTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATAGCACGGCAATCCCGTaGTCACGGCCCTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: FALGKLLLGRPWVTFLSDSTAIP*SRPSTS
Trigger: GGACGTGGAGGGCCGTGAGCACGGGATTGCCGTGCT...ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp TCAAATGCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGTGCCCTCTTCGATCTaGTCGTACTTGCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SNAHRGQVRLAAEAVWGEVPSSI*SYLRQG
Trigger: GCCCTGCCGCAAGTACGAGCAGATCGAAGAGGGCAC...CTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGCATTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTTCCCCGTCGTATACCTaGACATCCTCCAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAASPSYT*TSSRPA
Trigger: GGCAGGTCTGGAGGATGTGCAGGTATACGACGGGGA...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAATCCCCGTCGTATACCTaGACATCCTCCAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKSPSYT*TSSRPA
Trigger: GGCAGGTCTGGAGGATGTGCAGGTATACGACGGGGA...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTCCCCGTCGTATACCTaGACATCCTCCAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHSPSYT*TSSRPA
Trigger: GGCAGGTCTGGAGGATGTGCAGGTATACGACGGGGA...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTGCTGCAGACCCTTCTaGTCTATACGGTACCGCAGG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPCCRPF*SIRYRR
Trigger: CCTGCGGTACCGTATAGAGCAGAAGGGTCTGCAGCA...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTGGTGCTTGACGGCATaGAGGATGAGTCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPWCLTA*RMSLCC
Trigger: GCAGCACAGACTCATCCTGCATGCCGTCAAGCACCA...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp GGGCACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTTGGTGCTTGACGGCATaGAGGATGAGTCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GHFGGGLRDSRTARKGCGWCLTA*RMSLCC
Trigger: GCAGCACAGACTCATCCTGCATGCCGTCAAGCACCA...ACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp AAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGAGGGCAGCTGAGTCCTaGACGCCGGGGCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: KKQWQGGGTEECGPQTMGRAAES*TPGQLK
Trigger: CTTCAGCTGCCCCGGCGTGCAGGACTCAGCTGCCCT...CCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp TTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATAGGGCAGCTGAGTCCTaGACGCCGGGGCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: FALGKLLLGRPWVTFLSDRAAES*TPGQLK
Trigger: CTTCAGCTGCCCCGGCGTGCAGGACTCAGCTGCCCT...ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTTGGGGGCTCAGGATGTaGACCGGGCTCTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAAWGLRM*TGLSWI
Trigger: AATCCAAGAGAGCCCGGTGCACATCCTGAGCCCCCA...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTGGGGGCTCAGGATGTaGACCGGGCTCTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHWGLRM*TGLSWI
Trigger: AATCCAAGAGAGCCCGGTGCACATCCTGAGCCCCCA...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCATGGGGGCTCAGGATGTaGACCGGGCTCTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAWGLRM*TGLSWI
Trigger: AATCCAAGAGAGCCCGGTGCACATCCTGAGCCCCCA...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTACAGCGGAACTTGGCGTaGTTGCCCTCGTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: HFGGGLRDSRTARKGCGVQRNLA*LPSFTQ
Trigger: CTGGGTGAACGAGGGCAAGCACGCCAAGTTCCGCTG...TACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCATCTTTCACGTGCAGCTaGACGGCACTGAGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRASFTCS*TALSVW
Trigger: CCAGACGCTCAGTGCCGTGCAGCTGCACGTGAAAGA...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCGGGGCTCTTTCACGTaGAGCTGCACGGCACTGAGC +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVRGSFT*SCTALS
Trigger: GCTCAGTGCCGTGCAGCTGCACGTGAAAGAGCCCCG...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTATCCAGGGAGCGGGCTaGCGGGTGCACAATCCTCTC +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCIQGAG*RVHNPL
Trigger: GAGAGGATTGTGCACCCGGCAGCCCGCTCCCTGGAT...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp GGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTAATTCTGCCCGCACATCCTaGAACCGCCGTAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: GPEGLQDSQKRLWCRVGNSARTS*NRRRNS
Trigger: GCTGTTCCTACGGCGGTTGCAGGATGTGCGGGCAGA...ATTACCCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp AGGTGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATGCGCACGGCCCCCGCTaGACCCACTCGGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: RCGVLFDSHPCYLSGYVYAHGPR*THSACL
Trigger: GAGACAGGCCGAGTGGGTGCAGCGGGGGCCGTGCGC...ATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp GGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTAATAAGAGGCGGTGGATGTaGCCATCCTGGGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: GPEGLQDSQKRLWCRVGNKRRWM*PSWAMD
Trigger: GTCCATGGCCCAGGATGGGCACATCCACCGCCTCTT...ATTACCCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGGGTGGGGCCGTGGCTaGGCATCTCATACTTATCTC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHGWGRG*ASHTYL
Trigger: GAGATAAGTATGAGATGCGCAGCCACGGCCCCACCC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGGGTGGGGCCGTGGCTaGGCATCTCATACTTATCTC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAGWGRG*ASHTYL
Trigger: GAGATAAGTATGAGATGCGCAGCCACGGCCCCACCC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCCTGGCAGCAGTAAGTaGCTTGGTCCTCAGGTCGAA +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPPGSSK*LGPQVE
Trigger: TTCGACCTGAGGACCAAGGCACTTACTGCTGCCAGG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp AGGTTAACTTGCATGAGGTCACATAGGAAACAGAGGGCTCCAGCTTTGGGTGGGGGTCCCCGCCTGGGGTaGTCCGAACCCTCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RLTCMRSHRKQRAPALGGGPRLG*SEPSSG
Trigger: CCCAGACGAGGGTTCGGAGCACCCCAGGCGGGGACC...CCCACCCAAAGCTGGAGCCCTCTGTTTCCTATGTGACCTCATGCAAGTTAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAATCTGCCTTCAGCCTGTaGATGATGAGGCGCCGGACA +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKSAFSL*MMRRRT
Trigger: TGTCCGGCGCCTCATCATCCACAGGCTGAAGGCAGA...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTCTGCCTTCAGCCTGTaGATGATGAGGCGCCGGACA +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHSAFSL*MMRRRT
Trigger: TGTCCGGCGCCTCATCATCCACAGGCTGAAGGCAGA...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTTGGCCTGAGCTGCTCTaGCAGATGACCGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCWPELL*QMTGSS
Trigger: GGAGCTGCCGGTCATCTGCCAGAGCAGCTCAGGCCA...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp CACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAACCAGGGCATGCATGTaGCCTGAGCTGCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: HFGGGLRDSRTARKGCGVTRACM*PELLWQ
Trigger: CTGCCAGAGCAGCTCAGGCCACATGCATGCCCTGGT...TACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCACATCTCTGCCAATATaGGGGGTCCTGGGGGACTGT +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPTSLPI*GVLGDC
Trigger: ACAGTCCCCCAGGACCCCCCATATTGGCAGAGATGT...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGTGGGGTCTCGGGAGCTaGCTCGGGAGGCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QKAMAGRWDRGMWAPNYGWGLGS*LGRLPG
Trigger: ACCTGGAAGCCTCCCGAGCCAGCTCCCGAGACCCCA...CCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCCGTGGAACACCACGTaGGGACTACGGCCATGTCCG +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVPWNTT*GLRPCP
Trigger: CGGACATGGCCGTAGTCCCCACGTGGTGTTCCACGG...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp CTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGGCACTTTGGTCCACCAGGCGAGCTGTaGGCACAAGGTGAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LLLGRPWVTFLSDEGHFGPPGEL*AQGEQN
Trigger: GTTCTGCTCACCTTGTGCCCACAGCTCGCCTGGTGG...ACCAAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp AGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTGCCCCAGGTTCCACCTaGCCCTCCGGCTCGTTACTC +
Preference number: 4 (lower is better)
Translates to: RGKKQWQGGGTEECGPQTAPGST*PSGSLL
Trigger: GAGTAACGAGCCGGAGGGCCAGGTGGAACCTGGGGC...AGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp AAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCCCCAGGTTCCACCTaGCCCTCCGGCTCGTTACTC +
Preference number: 4 (lower is better)
Translates to: KKQWQGGGTEECGPQTMGAPGST*PSGSLL
Trigger: GAGTAACGAGCCGGAGGGCCAGGTGGAACCTGGGGC...CCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTAGGGCACCGCTGTCCTaGTGCTTGACGGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCRAPLS*CLTACR
Trigger: CCTGCATGCCGTCAAGCACCAGGACAGCGGTGCCCT...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp AGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGTGCACCGGGCTCTCTTaGATTGTGAGGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SNGREVGQRNVGPKLWGQCTGLS*IVRAAE
Trigger: CTCAGCTGCCCTCACAATCCAAGAGAGCCCGGTGCA...CTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTGCACCGGGCTCTCTTaGATTGTGAGGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHCTGLS*IVRAAE
Trigger: CTCAGCTGCCCTCACAATCCAAGAGAGCCCGGTGCA...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCACTGTCCTGGACTTTaGCCTCAGGCAGGATCAGAC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPHCPGL*PQAGSD
Trigger: GTCTGATCCTGCCTGAGGCCAAAGTCCAGGACAGTG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACAACTCGCCACTGTCCTaGACTTTGGCCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHNSPLS*TLASGR
Trigger: CCTGCCTGAGGCCAAAGTCCAGGACAGTGGCGAGTT...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp AAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGAGCACCAGGCGGCGATaGGGCCCCTCATTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KKQWQGGGTEECGPQTMGSTRRR*GPSFSS
Trigger: GCTGGAGAATGAGGGGCCCCATCGCCGCCTGGTGCT...CCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCCTCCTCTCCATCCTTaGTCCAGCGCACCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVPPLHP*SSAPLP
Trigger: GGGCAGAGGTGCGCTGGACCAAGGATGGAGAGGAGG...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAAGTGGGCCCCAAACTATaGGGGCAGCTGCTACTCAGT +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKVGPKL*GQLLLS
Trigger: ACTGAGTAGCAGCTGCCCCCATAGTTTGGGGCCCAC...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGCTGGAGCGCGAAGTaGCTGCTGTCCCACACTTCG +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQGWSAK*LLSHTS
Trigger: CGAAGTGTGGGACAGCAGCCACTTCGCGCTCCAGCC...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp AAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGGCACTTTGGCTGGAGCGCGAAGTaGCTGCTGTCCCACACTTCG +
Preference number: 4 (lower is better)
Translates to: KLLLGRPWVTFLSDEGHFGWSAK*LLSHTS
Trigger: CGAAGTGTGGGACAGCAGCCACTTCGCGCTCCAGCC...AAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCGTAGCAGCGGAACTTaGCGTGCTTGCCCTCGTTCA +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHRSSGT*RACPRS
Trigger: TGAACGAGGGCAAGCACGCCAAGTTCCGCTGCTACG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTATATGATCCGCACTaGGGGTTCTGTGACGGTGAC +
Preference number: 4 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWVYDPH*GFCDGD
Trigger: GTCACCGTCACAGAACCCCCAGTGCGGATCATATAC...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGTGCACAATCCTCTCTaGTGGGGCTGTGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPVHNPL*WGCDSD
Trigger: GTCACTGTCACAGCCCCACCAGAGAGGATTGTGCAC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GGGCACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTAGCAAGGAACTGCACTaGAGGCTCAGCCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: GHFGGGLRDSRTARKGCGSKELH*RLSQDD
Trigger: GTCATCCTGGCTGAGCCTCCAGTGCAGTTCCTTGCT...ACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR CCA 90 bp AGGTGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATCGGGGGCCCTCGGCATaGAGCTCTAGGCCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: RCGVLFDSHPCYLSGYVYRGPSA*SSRPSP
Trigger: GGGCGAGGGCCTAGAGCTCCATGCCGAGGGCCCCCG...ATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAAGTGGCTCAGCCACCTaGACGGTGAAGCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRASGSAT*TVKLRL
Trigger: AAGCCTCAGCTTCACCGTCCAGGTGGCTGAGCCACT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373876.5
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCTTCACACCGGAACGTaGCATCATCGCCCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHLHTGT*HHRPRG
Trigger: TCCACGAGGGCGATGATGCCACGTTCCGGTGTGAAG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGACATCGGCATCTGGTaGGGAGACTTCACACCGGAA +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPDIGIW*GDFTPE
Trigger: TTCCGGTGTGAAGTCTCCCCACCAGATGCCGATGTC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGGTGACATCGGCATCTaGTGGGGAGACTTCACACCG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHGDIGI*WGDFTP
Trigger: CGGTGTGAAGTCTCCCCACCAGATGCCGATGTCACC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTGCATCCCCCAGTTaGCAGCCTCGCAAGGTTAAG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHPASPS*QPRKVK
Trigger: CTTAACCTTGCGAGGCTGCCAACTGGGGGATGCAGG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTCTGTCTCTCGAACATaGAGCCGGGCACTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHSVSRT*SRALVA
Trigger: GGCCACAAGTGCCCGGCTCCATGTTCGAGAGACAGA...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGTGGATGAAGAGGCGGTaGATGTGCCCATCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ALGKLLLGRPWVTFLSDEWMKRR*MCPSWA
Trigger: GGCCCAGGATGGGCACATCCACCGCCTCTTCATCCA...CTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGCCAGTATGACACCATaGATGAAGAGGCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWASMTP*MKRRWM
Trigger: CATCCACCGCCTCTTCATCCATGGTGTCATACTGGC...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCCGCACGATGGTCACTaGGACCTCTCTCACAATGAG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPPHDGH*DLSHNE
Trigger: CTCATTGTGAGAGAGGTCCCAGTGACCATCGTGCGG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp AAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGGCACTTTGGGGGCTCAGCCACCTaGACGGTGAAGCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: KLLLGRPWVTFLSDEGHFGGSAT*TVKLRL
Trigger: AAGCCTCAGCTTCACCGTCCAGGTGGCTGAGCCCCC...AAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp CTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGGCACTTTGGTAAGATGCGGCTGTCCTaGGGCGCATCGCACAGGTAC +
Preference number: 4 (lower is better)
Translates to: LLLGRPWVTFLSDEGHFGKMRLS*GASHRY
Trigger: GTACCTGTGCGATGCGCCCCAGGACAGCCGCATCTT...ACCAAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp GGGCACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTCTGCTGGGACGGCCATaGGTGACTTTTCTCAGCGAT +
Preference number: 4 (lower is better)
Translates to: GHFGGGLRDSRTARKGCGLLGRP*VTFLSD
Trigger: ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAG...ACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTCGATGCTGAAGCACTaGATCCAGTCTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPSMLKH*IQSSEP
Trigger: GGGCTCTGAAGACTGGATTCAGTGCTTCAGCATCGA...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCGCTGTGGGCACAAGGTaGGCAGAACCGTGGAACACC +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVAVGTR*AEPWNT
Trigger: GGTGTTCCACGGTTCTGCTCACCTTGTGCCCACAGC...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp GCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGAGGATCTTGGACAGTaGCGCCGAAGAAGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: ALGKLLLGRPWVTFLSDEEDLGQ*RRRRPR
Trigger: TCTCGGCCTTCTTCGGCGTCACTGTCCAAGATCCTC...CTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTCACAGGCCAGCATaGCACACTCGGAAGTTATGG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHPHRPA*HTRKLW
Trigger: CCATAACTTCCGAGTGTGTCATGCTGGCCTGTGAGG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp CAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGTCTCCAGCGACGCACTaGAACTCGCCCCCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: QKAMAGRWDRGMWAPNYGSPATH*NSPPSE
Trigger: CTCAGACGGGGGCGAGTTTCAGTGCGTCGCTGGAGA...CCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp GGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTAATCATCGCGAGGGTATATaGTCCGCACTGGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: GPEGLQDSQKRLWCRVGNHREGI*SALGVL
Trigger: CAGAACCCCCAGTGCGGATCATATACCCTCGCGATG...ATTACCCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTGGACCTCTCTCACAATaGGTCTGGCTGCGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCGPLSQ*VWLRSA
Trigger: TGCGCTGCGCAGCCAGACTCATTGTGAGAGAGGTCC...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp CTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGGCACTTTGGTGACTTTTCTCAGCGATaGGGGGCACTTTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLLGRPWVTFLSDEGHFGDFSQR*GALWWG
Trigger: CCCCCACCAAAGTGCCCCTCATCGCTGAGAAAAGTC...ACCAAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp GGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTAATTGGGACGGCCATGGGTaGCTTTTCTCAGCGATGAGG +
Preference number: 4 (lower is better)
Translates to: GPEGLQDSQKRLWCRVGNWDGHG*LFSAMR
Trigger: CCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCA...ATTACCCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGCCTAGAATACATGCCTaGAGGATGCCCATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWPRIHA*RMPMAS
Trigger: ACTTGCCATGGGCATCCTTCAGGCATGTATTCTAGG...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp AGGTGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATCGGCCCTCCACGTCCTaGAGGGGCCGTGTGAACCGG +
Preference number: 4 (lower is better)
Translates to: RCGVLFDSHPCYLSGYVYRPSTS*RGRVNR
Trigger: CCGGTTCACACGGCCCCTGCAGGACGTGGAGGGCCG...ATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCATGCTGCAGACCCTTCTaGTCTATACGGTACCGCAGG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRACCRPF*SIRYRR
Trigger: CCTGCGGTACCGTATAGAGCAGAAGGGTCTGCAGCA...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTGGTGCTTGACGGCATaGAGGATGAGTCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHWCLTA*RMSLCC
Trigger: GCAGCACAGACTCATCCTGCATGCCGTCAAGCACCA...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCGCACCGCTGTCCTGGTaGTTGACGGCATGCAGGATG +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVAPLSW*LTACRM
Trigger: CATCCTGCATGCCGTCAAGCACCAGGACAGCGGTGC...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp CTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGGCACTTTGGTTGGGGGCTCAGGATGTaGACCGGGCTCTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: LLLGRPWVTFLSDEGHFGWGLRM*TGLSWI
Trigger: AATCCAAGAGAGCCCGGTGCACATCCTGAGCCCCCA...ACCAAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGGATCAGACGGTGTTTaGGCCCATCCATCTTCACCA +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPGSDGV*AHPSSP
Trigger: TGGTGAAGATGGATGGGCGCAAACACCGTCTGATCC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp AGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTGCCACATACACCTTaGCGCTGGGATACACGATCC +
Preference number: 4 (lower is better)
Translates to: SNGREVGQRNVGPKLWGQLPHTP*RWDTRS
Trigger: GGATCGTGTATCCCAGCGGCAAGGTGTATGTGGCAG...CTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTCTGCCACATACACCTTaGCGCTGGGATACACGATCC +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAALPHTP*RWDTRS
Trigger: GGATCGTGTATCCCAGCGGCAAGGTGTATGTGGCAG...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCTGCCACATACACCTTaGCGCTGGGATACACGATCC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHLPHTP*RWDTRS
Trigger: GGATCGTGTATCCCAGCGGCAAGGTGTATGTGGCAG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp AAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGCTCCAGGCGCACGGCTaGCACATACACCTTGCCGCT +
Preference number: 4 (lower is better)
Translates to: KKQWQGGGTEECGPQTMGLQAHG*HIHLAA
Trigger: AGCGGCAAGGTGTATGTGGCAGCCGTGCGCCTGGAG...CCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp GAGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACACAGTGTCTTCCTTCTaGAGGAGCAGCGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: ERQKAMAGRWDRGMWAPNTVSSF*RSSAGL
Trigger: GAGCCCCGCGCTGCTCCTGCAGAAGGAAGACACTGT...GTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAACAGTGTCTTCCTTCTaGAGGAGCAGCGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQTVSSF*RSSAGL
Trigger: GAGCCCCGCGCTGCTCCTGCAGAAGGAAGACACTGT...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp GAGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACGGAGCGCGAAGTGGCTaGTGTCCCACACTTCGTCCA +
Preference number: 4 (lower is better)
Translates to: ERQKAMAGRWDRGMWAPNGARSG*CPTLRP
Trigger: TGGACGAAGTGTGGGACAGCAGCCACTTCGCGCTCC...GTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR GCA 90 bp AGGTTAACTTGCATGAGGTCACATAGGAAACAGAGGGCTCCAGCTTTGGGTGGGGGGCGGCCCTCCCAGTaGCATTCGATCTCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: RLTCMRSHRKQRAPALGGGRPSQ*HSISGS
Trigger: CGAGCCCGAGATCGAATGGCACTGGGAGGGCCGCCC...CCCACCCAAAGCTGGAGCCCTCTGTTTCCTATGTGACCTCATGCAAGTTAACCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp TCAAATGCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGTCTTTCACGTGCAGCTaGACGGCACTGAGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: SNAHRGQVRLAAEAVWGESFTCS*TALSVW
Trigger: CCAGACGCTCAGTGCCGTGCAGCTGCACGTGAAAGA...CTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGCATTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR GCA 90 bp GGGCACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTAAGGTGATGGCCTCATaGCGGGTCTCACACACATAC +
Preference number: 4 (lower is better)
Translates to: GHFGGGLRDSRTARKGCGKVMAS*RVSHTY
Trigger: GTATGTGTGTGAGACCCGGCATGAGGCCATCACCTT...ACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCATCTAGAGCAAGGAACTaGACTGGAGGCTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRASRARN*TGGSAR
Trigger: CCTGGCTGAGCCTCCAGTGCAGTTCCTTGCTCTAGA...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTGGCCTGCAGCCTGGATaGAGAGGACTCGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFGLQPG*RGLGGG
Trigger: GCCCCCGCCGAGTCCTCTGCATCCAGGCTGCAGGCC...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTTCTGCCCGCACATCCTaGAACCGCCGTAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCSARTS*NRRRNS
Trigger: GCTGTTCCTACGGCGGTTGCAGGATGTGCGGGCAGA...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTATCCTGGCCTTCCTCTaGCCGCACATCCTGCAACCG +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCILAFL*PHILQP
Trigger: CGGTTGCAGGATGTGCGGGCAGAGGAAGGCCAGGAT...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCTGGCAGCAGTAAGTaGCTTGGTCCTCAGGTCGAA +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAPGSSK*LGPQVE
Trigger: TTCGACCTGAGGACCAAGGCACTTACTGCTGCCAGG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTGCAGTCCTTCCTGTTTaGCTCTCCAGCGAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCAVLPV*LSSEWP
Trigger: GGGCCACTCGCTGGAGAGGCAAACAGGAAGGACTGC...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGTCACCCAGGCTGGAATaGCGTGACATGATCATAGCT +
Preference number: 4 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWSPRLE*RDMIIA
Trigger: AGCTATGATCATGTCACGGCATTCCAGCCTGGGTGA...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGTGGGGATGCGGGAGTTaGGTACTTTACATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWWGCGS*VLYIPA
Trigger: TGCTGGAATGTAAAGTACCCAACTCCCGCATCCCCA...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp AAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGTGGCCTGAGCTGCTCTaGCAGATGACCGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KKQWQGGGTEECGPQTMGWPELL*QMTGSS
Trigger: GGAGCTGCCGGTCATCTGCCAGAGCAGCTCAGGCCA...CCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCACCAGGGCATGCATGTaGCCTGAGCTGCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVTRACM*PELLWQ
Trigger: CTGCCAGAGCAGCTCAGGCCACATGCATGCCCTGGT...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp GAGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACCTCTCGGGTGACCCCTaGAAGGACCAGGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: ERQKAMAGRWDRGMWAPNLSGDP*KDQGMH
Trigger: ATGCATGCCCTGGTCCTTCCAGGGGTCACCCGAGAG...GTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAAACATCTCTGCCAATATaGGGGGTCCTGGGGGACTGT +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKTSLPI*GVLGDC
Trigger: ACAGTCCCCCAGGACCCCCCATATTGGCAGAGATGT...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAACATCTCTGCCAATATaGGGGGTCCTGGGGGACTGT +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRATSLPI*GVLGDC
Trigger: ACAGTCCCCCAGGACCCCCCATATTGGCAGAGATGT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCAGCCGGTAGATGAATaGGGTCTCGGGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCQPVDE*GLGSWL
Trigger: GAGCCAGCTCCCGAGACCCCATTCATCTACCGGCTG...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp TTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATCCGTGGAACACCACGTaGGGACTACGGCCATGTCCG +
Preference number: 4 (lower is better)
Translates to: FALGKLLLGRPWVTFLSDPWNTT*GLRPCP
Trigger: CGGACATGGCCGTAGTCCCCACGTGGTGTTCCACGG...ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAACCACCAGGCGAGCTGTaGGCACAAGGTGAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQPPGEL*AQGEQN
Trigger: GTTCTGCTCACCTTGTGCCCACAGCTCGCCTGGTGG...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCAGGAACCAGGTACCCTaGATGATGGTGGAGAGATCG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPRNQVP*MMVERS
Trigger: CGATCTCTCCACCATCATCCAGGGTACCTGGTTCCT...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTCACTGTCCTGGACTTTaGCCTCAGGCAGGATCAGAC +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAAHCPGL*PQAGSD
Trigger: GTCTGATCCTGCCTGAGGCCAAAGTCCAGGACAGTG...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp TCAAATGCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGAACTCGCCACTGTCCTaGACTTTGGCCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SNAHRGQVRLAAEAVWGENSPLS*TLASGR
Trigger: CCTGCCTGAGGCCAAAGTCCAGGACAGTGGCGAGTT...CTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGCATTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTTGCACGGGAGGATCTTaGACAGTGACGCCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAACTGGS*TVTPKK
Trigger: CTTCTTCGGCGTCACTGTCCAAGATCCTCCCGTGCA...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCATGCACGGGAGGATCTTaGACAGTGACGCCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRACTGGS*TVTPKK
Trigger: CTTCTTCGGCGTCACTGTCCAAGATCCTCCCGTGCA...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTCATACACCTTGCCGCTaGGATACACGATCCACGAGG +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAAHTPCR*DTRSTR
Trigger: CCTCGTGGATCGTGTATCCCAGCGGCAAGGTGTATG...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCATACACCTTGCCGCTaGGATACACGATCCACGAGG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHHTPCR*DTRSTR
Trigger: CCTCGTGGATCGTGTATCCCAGCGGCAAGGTGTATG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCAAATGCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGTGGGCCCCAAACTATaGGGGCAGCTGCTACTCAGT +
Preference number: 4 (lower is better)
Translates to: SNAHRGQVRLAAEAVWGEVGPKL*GQLLLS
Trigger: ACTGAGTAGCAGCTGCCCCCATAGTTTGGGGCCCAC...CTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGCATTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTAGACCCCCGCGTCGGTaGGCAGTGCGGCGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFRPPRR*AVRRSA
Trigger: TGCTGACCGCCGCACTGCCCACCGACGCGGGGGTCT...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp AAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGGCTGGAGCGCGAAGTaGCTGCTGTCCCACACTTCG +
Preference number: 4 (lower is better)
Translates to: KKQWQGGGTEECGPQTMGGWSAK*LLSHTS
Trigger: CGAAGTGTGGGACAGCAGCCACTTCGCGCTCCAGCC...CCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR CCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAAAGAGCCCACGATCCTTaGCCTGGCAGTAAAGCACCT +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKRAHDP*PGSKAP
Trigger: AGGTGCTTTACTGCCAGGCCAAGGATCGTGGGCTCT...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAAGAGCCCACGATCCTTaGCCTGGCAGTAAAGCACCT +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRARAHDP*PGSKAP
Trigger: AGGTGCTTTACTGCCAGGCCAAGGATCGTGGGCTCT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAGCTCCACGCGCCCTaGAGCCCCAAAATGCAGATC +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVQLHAP*SPKMQI
Trigger: GATCTGCATTTTGGGGCTCCAGGGCGCGTGGAGCTG...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACAGCAAGGAACTGCACTaGAGGCTCAGCCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHSKELH*RLSQDD
Trigger: GTCATCCTGGCTGAGCCTCCAGTGCAGTTCCTTGCT...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GCCACTGCACCTGGTCTCAGCCCCATTTTTAAGGAGACTTGGCTCAAAGAGGTTGCTGGGCCTGCAGCCTaGATGCAGAGGACTCGGCGG +
Preference number: 4 (lower is better)
Translates to: ATAPGLSPIFKETWLKEVAGPAA*MQRTRR
Trigger: CCGCCGAGTCCTCTGCATCCAGGCTGCAGGCCCAGC...AACCTCTTTGAGCCAAGTCTCCTTAAAAATGGGGCTGAGACCAGGTGCAGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp GCCACTGCACCTGGTCTCAGCCCCATTTTTAAGGAGACTTGGCTCAAAGAGGTTGGTGAAGCTGAGGCTTaGGGCTCCGGGGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ATAPGLSPIFKETWLKEVGEAEA*GSGGCS
Trigger: GGAGCAGCCCCCGGAGCCCCAAGCCTCAGCTTCACC...AACCTCTTTGAGCCAAGTCTCCTTAAAAATGGGGCTGAGACCAGGTGCAGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp GCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGAGTGGCTCAGCCACCTaGACGGTGAAGCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: ALGKLLLGRPWVTFLSDESGSAT*TVKLRL
Trigger: AAGCCTCAGCTTCACCGTCCAGGTGGCTGAGCCACT...CTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000604031.5
CDS-3UTR CCA 90 bp CACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGCATCATCGCCCTCGTaGACAGTGAGTGGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: HFGGGLRDSRTARKGCGVASSPS*TVSGVS
Trigger: GCTGACACCACTCACTGTCCACGAGGGCGATGATGC...TACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp GCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGTGACATCGGCATCTaGTGGGGAGACTTCACACCG +
Preference number: 4 (lower is better)
Translates to: ALGKLLLGRPWVTFLSDEGDIGI*WGDFTP
Trigger: CGGTGTGAAGTCTCCCCACCAGATGCCGATGTCACC...CTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp AGGTGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATGGAGCCGGGCACTTGTaGCCGTGCTCCCTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: RCGVLFDSHPCYLSGYVYGAGHL*PCSLPA
Trigger: TGCGGGCAGGGAGCACGGCCACAAGTGCCCGGCTCC...ATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp GGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTAATTCGAGACACACATCCTaGCCTTCCTCTGCCCGCACA +
Preference number: 4 (lower is better)
Translates to: GPEGLQDSQKRLWCRVGNSRHTS*PSSART
Trigger: TGTGCGGGCAGAGGAAGGCCAGGATGTGTGTCTCGA...ATTACCCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATCCCGACAGGCGAGAGTCGTaGGGCAGGGGCTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: CGVLFDSHPCYLSGYVYPDRRES*GRGCPP
Trigger: AGGTGGGCAGCCCCTGCCCCACGACTCTCGCCTGTC...GGGATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCTGGATGTGCCCATCCTaGGCCATGGACAGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVWMCPS*AMDRRE
Trigger: CTCTCGCCTGTCCATGGCCCAGGATGGGCACATCCA...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTTGGATGAAGAGGCGGTaGATGTGCCCATCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCWMKRR*MCPSWA
Trigger: GGCCCAGGATGGGCACATCCACCGCCTCTTCATCCA...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGTGACACTTGGGTCCTaGATACAGCTGTACTCCACC +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPVTLGS*IQLYST
Trigger: GGTGGAGTACAGCTGTATCCAGGACCCAAGTGTCAC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTCAGGTCGAACGTCATaGATGACCAGGCTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHSGRTS*MTRLWV
Trigger: CACCCACAGCCTGGTCATCCATGACGTTCGACCTGA...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTAGCTGCACCCGCCCCTaGCTTGCCAGTCGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFSCTRP*LASRSP
Trigger: CGGGGAGCGACTGGCAAGCCAGGGGCGGGTGCAGCT...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAAAGATGCGGCTGTCCTaGGGCGCATCGCACAGGTAC +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQKMRLS*GASHRY
Trigger: GTACCTGTGCGATGCGCCCCAGGACAGCCGCATCTT...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCGGCTTTCTCGATGCTaGAGCACTGAATCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPRLSRC*STESSL
Trigger: AAGACTGGATTCAGTGCTTCAGCATCGAGAAAGCCG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAACGGGAAGTCCACCCTTaGGAGCTCACAAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQREVHP*ELTSQH
Trigger: GTGCTGACTTGTGAGCTCTCAAGGGTGGACTTCCCG...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCGAGGATCTTGGACAGTaGCGCCGAAGAAGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVEDLGQ*RRRRPR
Trigger: TCTCGGCCTTCTTCGGCGTCACTGTCCAAGATCCTC...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAACCGTCCGAGTGGATGTaGCACTTGGGTCCTGGATAC +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQPSEWM*HLGPGY
Trigger: GTATCCAGGACCCAAGTGTCACATCCACTCGGACGG...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGCAGGGAATCCGCTGTaGAGGAGACACAGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQAGNPL*RRHSLS
Trigger: ACTCAGGCTGTGTCTCCTTCACAGCGGATTCCCTGC...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp AAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGGCACTTTGACTTTTCTCAGCGATaGGGGGCACTTTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: KLLLGRPWVTFLSDEGHFDFSQR*GALWWG
Trigger: CCCCCACCAAAGTGCCCCTCATCGCTGAGAAAAGTC...AAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCTCCCCGTCGTATACCTaGACATCCTCCAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVSPSYT*TSSRPA
Trigger: GGCAGGTCTGGAGGATGTGCAGGTATACGACGGGGA...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp TCAAATGCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGTGCTGCAGACCCTTCTaGTCTATACGGTACCGCAGG +
Preference number: 4 (lower is better)
Translates to: SNAHRGQVRLAAEAVWGECCRPF*SIRYRR
Trigger: CCTGCGGTACCGTATAGAGCAGAAGGGTCTGCAGCA...CTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGCATTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCATGCAGGATGAGTCTGTaGTGCAGACCCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRACRMSL*CRPFCS
Trigger: AGAGCAGAAGGGTCTGCAGCACAGACTCATCCTGCA...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp AAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCATGGTGCTTGACGGCATaGAGGATGAGTCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KQWQGGGTEECGPQTMGAWCLTA*RMSLCC
Trigger: GCAGCACAGACTCATCCTGCATGCCGTCAAGCACCA...TGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp CAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGCACCGCTGTCCTGGTaGTTGACGGCATGCAGGATG +
Preference number: 4 (lower is better)
Translates to: QKAMAGRWDRGMWAPNYGAPLSW*LTACRM
Trigger: CATCCTGCATGCCGTCAAGCACCAGGACAGCGGTGC...CCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp AGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTCGGGGGTCCACGATGTaGACGGGAGGATCTTGGACA +
Preference number: 4 (lower is better)
Translates to: RGKKQWQGGGTEECGPQTRGSTM*TGGSWT
Trigger: TGTCCAAGATCCTCCCGTGCACATCGTGGACCCCCG...AGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTAACTATGGGGGCAGCTaGTACTCAGTGCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAANYGGS*YSVPAV
Trigger: AACAGCTGGCACTGAGTAGCAGCTGCCCCCATAGTT...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp TTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATCCTGGAGCCCCAAAATaGAGATCCAGGGAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: FALGKLLLGRPWVTFLSDPGAPK*RSRERA
Trigger: AGCCCGCTCCCTGGATCTGCATTTTGGGGCTCCAGG...ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACAAGGTGATGGCCTCATaGCGGGTCTCACACACATAC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHKVMAS*RVSHTY
Trigger: GTATGTGTGTGAGACCCGGCATGAGGCCATCACCTT...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAAAGGTGATGGCCTCATaGCGGGTCTCACACACATAC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAKVMAS*RVSHTY
Trigger: GTATGTGTGTGAGACCCGGCATGAGGCCATCACCTT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTATCTAGAGCAAGGAACTaGACTGGAGGCTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: HFGGGLRDSRTARKGCGVSRARN*TGGSAR
Trigger: CCTGGCTGAGCCTCCAGTGCAGTTCCTTGCTCTAGA...TACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR GCA 90 bp CCACTGCACCTGGTCTCAGCCCCATTTTTAAGGAGACTTGGCTCAAAGAGGTTAAGGCCCTCGCCCTCCTaGACGGGCCTCCCATTGTGG +
Preference number: 4 (lower is better)
Translates to: PLHLVSAPFLRRLGSKRLRPSPS*TGLPLW
Trigger: CCACAATGGGAGGCCCGTGCAGGAGGGCGAGGGCCT...TAACCTCTTTGAGCCAAGTCTCCTTAAAAATGGGGCTGAGACCAGGTGCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp TTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATTCTGCCCGCACATCCTaGAACCGCCGTAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: FALGKLLLGRPWVTFLSDSARTS*NRRRNS
Trigger: GCTGTTCCTACGGCGGTTGCAGGATGTGCGGGCAGA...ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp TTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATAAGAGGCGGTGGATGTaGCCATCCTGGGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: FALGKLLLGRPWVTFLSDKRRWM*PSWAMD
Trigger: GTCCATGGCCCAGGATGGGCACATCCACCGCCTCTT...ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp CTTAAGTGGGTATGTGTATCCCTAGAATACATGCCTGAAGGATGCCCATGGCAAAGCGTCCCCGCTCCGTaGCCCCTGCACCCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LKWVCVSLEYMPEGCPWQSVPAP*PLHPQH
Trigger: GTGCTGCGGGTGCAGGGGGCACGGAGCGGGGACGCT...TTGCCATGGGCATCCTTCAGGCATGTATTCTAGGGATACACATACCCACTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTGGGGATGCGGGAGTTaGGTACTTTACATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPWGCGS*VLYIPA
Trigger: TGCTGGAATGTAAAGTACCCAACTCCCGCATCCCCA...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTTCTGCCTTCAGCCTGTaGATGATGAGGCGCCGGACA +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCSAFSL*MMRRRT
Trigger: TGTCCGGCGCCTCATCATCCACAGGCTGAAGGCAGA...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp AGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATTGGCCTGAGCTGCTCTaGCAGATGACCGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RQKAMAGRWDRGMWAPNYWPELL*QMTGSS
Trigger: GGAGCTGCCGGTCATCTGCCAGAGCAGCTCAGGCCA...ATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp AAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGACCAGGGCATGCATGTaGCCTGAGCTGCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: KKQWQGGGTEECGPQTMGTRACM*PELLWQ
Trigger: CTGCCAGAGCAGCTCAGGCCACATGCATGCCCTGGT...CCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACAGGACCGTGTTCTTGTaGCCCTTGAACATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHRTVFL*PLNISA
Trigger: GGCAGAGATGTTCAAGGGCCACAAGAACACGGTCCT...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp AGGTTAACTTGCATGAGGTCACATAGGAAACAGAGGGCTCCAGCTTTGGGTGGGTGGGGTCTCGGGAGCTaGCTCGGGAGGCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RLTCMRSHRKQRAPALGGWGLGS*LGRLPG
Trigger: ACCTGGAAGCCTCCCGAGCCAGCTCCCGAGACCCCA...CCCACCCAAAGCTGGAGCCCTCTGTTTCCTATGTGACCTCATGCAAGTTAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp CAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGCAGCCGGTAGATGAATaGGGTCTCGGGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QKAMAGRWDRGMWAPNYGQPVDE*GLGSWL
Trigger: GAGCCAGCTCCCGAGACCCCATTCATCTACCGGCTG...CCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp AGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTCCACCAGGCGAGCTGTaGGCACAAGGTGAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: RGKKQWQGGGTEECGPQTPPGEL*AQGEQN
Trigger: GTTCTGCTCACCTTGTGCCCACAGCTCGCCTGGTGG...AGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAAAGGAACCAGGTACCCTaGATGATGGTGGAGAGATCG +
Preference number: 4 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKRNQVP*MMVERS
Trigger: CGATCTCTCCACCATCATCCAGGGTACCTGGTTCCT...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp GAGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTGCACCGGGCTCTCTTaGATTGTGAGGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ERQKAMAGRWDRGMWAPNCTGLS*IVRAAE
Trigger: CTCAGCTGCCCTCACAATCCAAGAGAGCCCGGTGCA...GTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTTGCACCGGGCTCTCTTaGATTGTGAGGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCCTGLS*IVRAAE
Trigger: CTCAGCTGCCCTCACAATCCAAGAGAGCCCGGTGCA...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp TCAAATGCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGCATACACCTTGCCGCTaGGATACACGATCCACGAGG +
Preference number: 4 (lower is better)
Translates to: SNAHRGQVRLAAEAVWGEHTPCR*DTRSTR
Trigger: CCTCGTGGATCGTGTATCCCAGCGGCAAGGTGTATG...CTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGCATTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp AGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATCCTCCTCTCCATCCTTaGTCCAGCGCACCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: RQKAMAGRWDRGMWAPNYPPLHP*SSAPLP
Trigger: GGGCAGAGGTGCGCTGGACCAAGGATGGAGAGGAGG...ATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp CAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGCAATGGCAGGGAGGTaGGACAGAGGAATGTGGGCC +
Preference number: 4 (lower is better)
Translates to: QKAMAGRWDRGMWAPNYGAMAGR*DRGMWA
Trigger: GGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGC...CCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTAGAGGCAAAAAGCAATaGCAGGGAGGTGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAARGKKQ*QGGGTE
Trigger: CTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTGCGGCTGAAGCAGTCTaGGGAGAGGCAAAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAAAAEAV*GEAKSN
Trigger: ATTGCTTTTTGCCTCTCCCCAGACTGCTTCAGCCGC...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGTATATGATCCGCACTaGGGGTTCTGTGACGGTGAC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHVYDPH*GFCDGD
Trigger: GTCACCGTCACAGAACCCCCAGTGCGGATCATATAC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCACAATCCTCTCTGGTaGGGCTGTGACAGTGACAGT +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHHNPLW*GCDSDS
Trigger: ACTGTCACTGTCACAGCCCCACCAGAGAGGATTGTG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTGCTGGGCCTGCAGCCTaGATGCAGAGGACTCGGCGG +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFAGPAA*MQRTRR
Trigger: CCGCCGAGTCCTCTGCATCCAGGCTGCAGGCCCAGC...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp AAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGGCACTTTAGTGGCTCAGCCACCTaGACGGTGAAGCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: KLLLGRPWVTFLSDEGHFSGSAT*TVKLRL
Trigger: AAGCCTCAGCTTCACCGTCCAGGTGGCTGAGCCACT...AAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000604031.5
CDS-3UTR CCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAACTCGTGGACAGTGAGTaGTGTCAGCTCCGAGACCAG +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQLVDSE*CQLRDQ
Trigger: CTGGTCTCGGAGCTGACACCACTCACTGTCCACGAG...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp AAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGGCACTTTCTCGTGGACAGTGAGTaGTGTCAGCTCCGAGACCAG +
Preference number: 4 (lower is better)
Translates to: KLLLGRPWVTFLSDEGHFLVDSE*CQLRDQ
Trigger: CTGGTCTCGGAGCTGACACCACTCACTGTCCACGAG...AAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGCATCATCGCCCTCGTaGACAGTGAGTGGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQASSPS*TVSGVS
Trigger: GCTGACACCACTCACTGTCCACGAGGGCGATGATGC...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp AAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGGCACTTTGCATCATCGCCCTCGTaGACAGTGAGTGGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: KLLLGRPWVTFLSDEGHFASSPS*TVSGVS
Trigger: GCTGACACCACTCACTGTCCACGAGGGCGATGATGC...AAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCTTCACACCGGAACGTaGCATCATCGCCCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVLHTGT*HHRPRG
Trigger: TCCACGAGGGCGATGATGCCACGTTCCGGTGTGAAG...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp AAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGGCACTTTCTTCACACCGGAACGTaGCATCATCGCCCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: KLLLGRPWVTFLSDEGHFLHTGT*HHRPRG
Trigger: TCCACGAGGGCGATGATGCCACGTTCCGGTGTGAAG...AAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGTGACATCGGCATCTaGTGGGGAGACTTCACACCG +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQGDIGI*WGDFTP
Trigger: CGGTGTGAAGTCTCCCCACCAGATGCCGATGTCACC...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTTCTGTCTCTCGAACATaGAGCCGGGCACTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCSVSRT*SRALVA
Trigger: GGCCACAAGTGCCCGGCTCCATGTTCGAGAGACAGA...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTTCGAGACACACATCCTaGCCTTCCTCTGCCCGCACA +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCSRHTS*PSSART
Trigger: TGTGCGGGCAGAGGAAGGCCAGGATGTGTGTCTCGA...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp TTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATTGGATGTGCCCATCCTaGGCCATGGACAGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: FALGKLLLGRPWVTFLSDWMCPS*AMDRRE
Trigger: CTCTCGCCTGTCCATGGCCCAGGATGGGCACATCCA...ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATTGGATGAAGAGGCGGTaGATGTGCCCATCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FALGKLLLGRPWVTFLSDWMKRR*MCPSWA
Trigger: GGCCCAGGATGGGCACATCCACCGCCTCTTCATCCA...ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGCCAGTATGACACCATaGATGAAGAGGCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHASMTP*MKRRWM
Trigger: CATCCACCGCCTCTTCATCCATGGTGTCATACTGGC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGTGACACTTGGGTCCTaGATACAGCTGTACTCCACC +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAVTLGS*IQLYST
Trigger: GGTGGAGTACAGCTGTATCCAGGACCCAAGTGTCAC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAACTGTGGGTGGGGCCGTaGCTGCGCATCTCATACTTA +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQLWVGP*LRISYL
Trigger: TAAGTATGAGATGCGCAGCCACGGCCCCACCCACAG...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp GGGCACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTAGCCAGAAAAGGCTGTaGTGTAGGGTGGGTAATGCA +
Preference number: 4 (lower is better)
Translates to: GHFGGGLRDSRTARKGCGSQKRL*CRVGNA
Trigger: TGCATTACCCACCCTACACCACAGCCTTTTCTGGCT...ACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp GGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTAATCTGCTGGGACGGCCATaGGTGACTTTTCTCAGCGAT +
Preference number: 4 (lower is better)
Translates to: GPEGLQDSQKRLWCRVGNLLGRP*VTFLSD
Trigger: ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAG...ATTACCCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp AGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGCATGCATGTGGCCTaGGCTGCTCTGGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: RQKAMAGRWDRGMWAPNYGMHVA*AALADD
Trigger: GTCATCTGCCAGAGCAGCTCAGGCCACATGCATGCC...ATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTGTTCTTGTGGCCCTTaGACATCTCTGCCAATATGG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPCSCGP*TSLPIW
Trigger: CCATATTGGCAGAGATGTTCAAGGGCCACAAGAACA...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTCGGCTTTCTCGATGCTaGAGCACTGAATCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAARLSRC*STESSL
Trigger: AAGACTGGATTCAGTGCTTCAGCATCGAGAAAGCCG...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGGCTTTCTCGATGCTaGAGCACTGAATCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRARLSRC*STESSL
Trigger: AAGACTGGATTCAGTGCTTCAGCATCGAGAAAGCCG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp AGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATTACGGCCATGTCCGCTaGCTGTGCAGATGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: RQKAMAGRWDRGMWAPNYYGHVR*LCRCGS
Trigger: GCTTCCGCATCTGCACAGTCAGCGGACATGGCCGTA...ATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp CAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGCCCGCTCTGAGGTTGTaGAGGTCAACGACACCCTGT +
Preference number: 4 (lower is better)
Translates to: QKAMAGRWDRGMWAPNYGPALRL*RSTTPC
Trigger: ACAGGGTGTCGTTGACCTTCACAACCTCAGAGCGGG...CCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp AAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGCCCGCTCTGAGGTTGTaGAGGTCAACGACACCCTGT +
Preference number: 4 (lower is better)
Translates to: KKQWQGGGTEECGPQTMGPALRL*RSTTPC
Trigger: ACAGGGTGTCGTTGACCTTCACAACCTCAGAGCGGG...CCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp CAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGCAGCACCACCCGCTCTaGGGTTGTGAAGGTCAACGA +
Preference number: 4 (lower is better)
Translates to: QKAMAGRWDRGMWAPNYGQHHPL*GCEGQR
Trigger: TCGTTGACCTTCACAACCTCAGAGCGGGTGGTGCTG...CCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp AGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTGAGGATCTTGGACAGTaGCGCCGAAGAAGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: RGKKQWQGGGTEECGPQTEDLGQ*RRRRPR
Trigger: TCTCGGCCTTCTTCGGCGTCACTGTCCAAGATCCTC...AGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp CAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGAGGATCTTGGACAGTaGCGCCGAAGAAGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: QKAMAGRWDRGMWAPNYGEDLGQ*RRRRPR
Trigger: TCTCGGCCTTCTTCGGCGTCACTGTCCAAGATCCTC...CCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp GCCACTGCACCTGGTCTCAGCCCCATTTTTAAGGAGACTTGGCTCAAAGAGGTTGGCAGTAAAGCACCTTaGGCACGAAGCCGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: ATAPGLSPIFKETWLKEVGSKAP*ARSRRR
Trigger: GCGACGGCGGCTTCGTGCTCAAGGTGCTTTACTGCC...AACCTCTTTGAGCCAAGTCTCCTTAAAAATGGGGCTGAGACCAGGTGCAGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp CTTAAGTGGGTATGTGTATCCCTAGAATACATGCCTGAAGGATGCCCATGGCAACCCCCGTCCTCGGGCTaGGCAGCAGGTAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LKWVCVSLEYMPEGCPWQPPSSG*AAGSTR
Trigger: CCTGGTGCTACCTGCTGCTCAGCCCGAGGACGGGGG...TTGCCATGGGCATCCTTCAGGCATGTATTCTAGGGATACACATACCCACTTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp TTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATTGGGACGGCCATGGGTaGCTTTTCTCAGCGATGAGG +
Preference number: 4 (lower is better)
Translates to: FALGKLLLGRPWVTFLSDWDGHG*LFSAMR
Trigger: CCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCA...ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp AGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTTGGGGGCTCAGGATGTaGACCGGGCTCTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: RGKKQWQGGGTEECGPQTWGLRM*TGLSWI
Trigger: AATCCAAGAGAGCCCGGTGCACATCCTGAGCCCCCA...AGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTCGGAAGTTATGGCATaGACGAACACATGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPSEVMA*TNTCSR
Trigger: CCGAGAACATGTGTTCGTGCATGCCATAACTTCCGA...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCTGCCACATACACCTTaGCGCTGGGATACACGATCC +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVLPHTP*RWDTRS
Trigger: GGATCGTGTATCCCAGCGGCAAGGTGTATGTGGCAG...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp TGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATCCCCTCCAGGCGCACGGCTaGCACATACACCTTGCCGCT +
Preference number: 4 (lower is better)
Translates to: CGVLFDSHPCYLSGYVYPLQAHG*HIHLAA
Trigger: AGCGGCAAGGTGTATGTGGCAGCCGTGCGCCTGGAG...GGGATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp AGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATACAGTGTCTTCCTTCTaGAGGAGCAGCGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RQKAMAGRWDRGMWAPNYTVSSF*RSSAGL
Trigger: GAGCCCCGCGCTGCTCCTGCAGAAGGAAGACACTGT...ATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp CCACTGCACCTGGTCTCAGCCCCATTTTTAAGGAGACTTGGCTCAAAGAGGTTAGAGCGGGCTGCCGGGTaGACAATCCTCTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PLHLVSAPFLRRLGSKRLERAAG*TILSGG
Trigger: CCCACCAGAGAGGATTGTGCACCCGGCAGCCCGCTC...TAACCTCTTTGAGCCAAGTCTCCTTAAAAATGGGGCTGAGACCAGGTGCAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTTCTAGAGCAAGGAACTaGACTGGAGGCTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCSRARN*TGGSAR
Trigger: CCTGGCTGAGCCTCCAGTGCAGTTCCTTGCTCTAGA...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTGCAGGTGTAGAGCCCTaGATGGGCTGGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFAGVEP*MGWACS
Trigger: GCTGCAGGCCCAGCCCATGCAGGGCTCTACACCTGC...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp AGGTGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATTGGGGCTCCGGGGGCTaGTCCAGACTGGCAGGTGTA +
Preference number: 4 (lower is better)
Translates to: RCGVLFDSHPCYLSGYVYWGSGG*SRLAGV
Trigger: TACACCTGCCAGTCTGGAGCAGCCCCCGGAGCCCCA...ATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTCGCAAGGTTAAGATaGGGCTTGAACCATTCTGGG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRALARLR*GLNHSG
Trigger: CCCAGAATGGTTCAAGCCGCATCTTAACCTTGCGAG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp TTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGTGGGAGGTGTGGGGTaGTGTTTGACAGCCATCCCT +
Preference number: 4 (lower is better)
Translates to: FALGKLLLGRPWVTFLSDVGGVG*CLTAIP
Trigger: AGGGATGGCTGTCAAACAGCACCCCACACCTCCCAC...ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTTGGGGATGCGGGAGTTaGGTACTTTACATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAAWGCGS*VLYIPA
Trigger: TGCTGGAATGTAAAGTACCCAACTCCCGCATCCCCA...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp AAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGTCTGCCTTCAGCCTGTaGATGATGAGGCGCCGGACA +
Preference number: 4 (lower is better)
Translates to: KKQWQGGGTEECGPQTMGSAFSL*MMRRRT
Trigger: TGTCCGGCGCCTCATCATCCACAGGCTGAAGGCAGA...CCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp GCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGAGGAACCAGGTACCCTaGATGATGGTGGAGAGATCG +
Preference number: 4 (lower is better)
Translates to: ALGKLLLGRPWVTFLSDERNQVP*MMVERS
Trigger: CGATCTCTCCACCATCATCCAGGGTACCTGGTTCCT...CTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp AGGTGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATGCCCCAGGTTCCACCTaGCCCTCCGGCTCGTTACTC +
Preference number: 4 (lower is better)
Translates to: RCGVLFDSHPCYLSGYVYAPGST*PSGSLL
Trigger: GAGTAACGAGCCGGAGGGCCAGGTGGAACCTGGGGC...ATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp TGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATCCCAGGGCACCGCTGTCCTaGTGCTTGACGGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: CGVLFDSHPCYLSGYVYPRAPLS*CLTACR
Trigger: CCTGCATGCCGTCAAGCACCAGGACAGCGGTGCCCT...GGGATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCACTGTCCTGGACTTTaGCCTCAGGCAGGATCAGAC +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCHCPGL*PQAGSD
Trigger: GTCTGATCCTGCCTGAGGCCAAAGTCCAGGACAGTG...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp AGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTAACTCGCCACTGTCCTaGACTTTGGCCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RGKKQWQGGGTEECGPQTNSPLS*TLASGR
Trigger: CCTGCCTGAGGCCAAAGTCCAGGACAGTGGCGAGTT...AGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCTGCACGGGAGGATCTTaGACAGTGACGCCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVCTGGS*TVTPKK
Trigger: CTTCTTCGGCGTCACTGTCCAAGATCCTCCCGTGCA...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCATACACCTTGCCGCTaGGATACACGATCCACGAGG +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCHTPCR*DTRSTR
Trigger: CCTCGTGGATCGTGTATCCCAGCGGCAAGGTGTATG...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp TCAAATGCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGAGAGGCAAAAAGCAATaGCAGGGAGGTGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: SNAHRGQVRLAAEAVWGERGKKQ*QGGGTE
Trigger: CTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT...CTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGCATTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp CAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGCGTAGCAGCGGAACTTaGCGTGCTTGCCCTCGTTCA +
Preference number: 4 (lower is better)
Translates to: QKAMAGRWDRGMWAPNYGRSSGT*RACPRS
Trigger: TGAACGAGGGCAAGCACGCCAAGTTCCGCTGCTACG...CCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR CCA 90 bp TTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATCGTAGCAGCGGAACTTaGCGTGCTTGCCCTCGTTCA +
Preference number: 4 (lower is better)
Translates to: FALGKLLLGRPWVTFLSDRSSGT*RACPRS
Trigger: TGAACGAGGGCAAGCACGCCAAGTTCCGCTGCTACG...ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAAGAGCCCACGATCCTTaGCCTGGCAGTAAAGCACCT +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQRAHDP*PGSKAP
Trigger: AGGTGCTTTACTGCCAGGCCAAGGATCGTGGGCTCT...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCGTGCACAATCCTCTCTaGTGGGGCTGTGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVVHNPL*WGCDSD
Trigger: GTCACTGTCACAGCCCCACCAGAGAGGATTGTGCAC...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTGACATCGGCATCTGGTaGGGAGACTTCACACCGGAA +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCDIGIW*GDFTPE
Trigger: TTCCGGTGTGAAGTCTCCCCACCAGATGCCGATGTC...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp TTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATTCTGTCTCTCGAACATaGAGCCGGGCACTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: FALGKLLLGRPWVTFLSDSVSRT*SRALVA
Trigger: GGCCACAAGTGCCCGGCTCCATGTTCGAGAGACAGA...ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTGCCCATCCTGGGCCATaGACAGGCGAGAGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFAHPGP*TGESRG
Trigger: CCCACGACTCTCGCCTGTCCATGGCCCAGGATGGGC...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACACATCAGCCAAAGCTTaGGAAAGCTCGCACTCGAAC +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHTSAKA*ESSHSN
Trigger: GTTCGAGTGCGAGCTTTCCCAAGCTTTGGCTGATGT...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAATCAGGTCGAACGTCATaGATGACCAGGCTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQSGRTS*MTRLWV
Trigger: CACCCACAGCCTGGTCATCCATGACGTTCGACCTGA...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAGCTTCACCAGCAGTaGCTCTTCCACGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVQLHQQ*LFHADK
Trigger: CTTGTCAGCGTGGAAGAGCCACTGCTGGTGAAGCTG...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR TCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCATGTTCTTGTGGCCCTTaGACATCTCTGCCAATATGG +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRACSCGP*TSLPIW
Trigger: CCATATTGGCAGAGATGTTCAAGGGCCACAAGAACA...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR TCA 90 bp CACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTACGGCTTTCTCGATGCTaGAGCACTGAATCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: HFGGGLRDSRTARKGCGVRLSRC*STESSL
Trigger: AAGACTGGATTCAGTGCTTCAGCATCGAGAAAGCCG...TACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp AGGTTAACTTGCATGAGGTCACATAGGAAACAGAGGGCTCCAGCTTTGGGTGGGTACGGCCATGTCCGCTaGCTGTGCAGATGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: RLTCMRSHRKQRAPALGGYGHVR*LCRCGS
Trigger: GCTTCCGCATCTGCACAGTCAGCGGACATGGCCGTA...CCCACCCAAAGCTGGAGCCCTCTGTTTCCTATGTGACCTCATGCAAGTTAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp AGGTTAACTTGCATGAGGTCACATAGGAAACAGAGGGCTCCAGCTTTGGGTGGGGCTGTGGGCACAAGGTaGGCAGAACCGTGGAACACC +
Preference number: 4 (lower is better)
Translates to: RLTCMRSHRKQRAPALGGAVGTR*AEPWNT
Trigger: GGTGTTCCACGGTTCTGCTCACCTTGTGCCCACAGC...CCCACCCAAAGCTGGAGCCCTCTGTTTCCTATGTGACCTCATGCAAGTTAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp AGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTCCTCACAGGCCAGCATaGCACACTCGGAAGTTATGG +
Preference number: 4 (lower is better)
Translates to: RGKKQWQGGGTEECGPQTPHRPA*HTRKLW
Trigger: CCATAACTTCCGAGTGTGTCATGCTGGCCTGTGAGG...AGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp CAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGCCTCACAGGCCAGCATaGCACACTCGGAAGTTATGG +
Preference number: 4 (lower is better)
Translates to: QKAMAGRWDRGMWAPNYGPHRPA*HTRKLW
Trigger: CCATAACTTCCGAGTGTGTCATGCTGGCCTGTGAGG...CCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp AGGTGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATCGCCCTCGTGGACAGTaGGTGGTGTCAGCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: RCGVLFDSHPCYLSGYVYRPRGQ*VVSAPR
Trigger: TCTCGGAGCTGACACCACTCACTGTCCACGAGGGCG...ATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTACTTTGGTGGGGGCCTaGGGGACTCCAGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFTLVGA*GTPGQP
Trigger: TGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGT...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp AGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGGATACCATCATCGTCTaGCTTCAGCCTGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: SNGREVGQRNVGPKLWGQDTIIV*LQPVDD
Trigger: ATCATCCACAGGCTGAAGGCAGACGATGATGGTATC...CTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGATACCATCATCGTCTaGCTTCAGCCTGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHDTIIV*LQPVDD
Trigger: ATCATCCACAGGCTGAAGGCAGACGATGATGGTATC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGTGCTGCAGACCCTTCTaGTCTATACGGTACCGCAGG +
Preference number: 4 (lower is better)
Translates to: QKAMAGRWDRGMWAPNYGCCRPF*SIRYRR
Trigger: CCTGCGGTACCGTATAGAGCAGAAGGGTCTGCAGCA...CCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp AGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGAGGATGAGTCTGTGCTaGAGACCCTTCTGCTCTATA +
Preference number: 4 (lower is better)
Translates to: SNGREVGQRNVGPKLWGQRMSLC*RPFCSI
Trigger: TATAGAGCAGAAGGGTCTGCAGCACAGACTCATCCT...CTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAAGGATGAGTCTGTGCTaGAGACCCTTCTGCTCTATA +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRARMSLC*RPFCSI
Trigger: TATAGAGCAGAAGGGTCTGCAGCACAGACTCATCCT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTTCGGAAGTTATGGCATaGACGAACACATGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: QWQGGGTEECGPQTMGAASEVMA*TNTCSR
Trigger: CCGAGAACATGTGTTCGTGCATGCCATAACTTCCGA...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTCGGAAGTTATGGCATaGACGAACACATGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHSEVMA*TNTCSR
Trigger: CCGAGAACATGTGTTCGTGCATGCCATAACTTCCGA...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR GCA 90 bp GGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTAATCTCGCAAGGTTAAGATaGGGCTTGAACCATTCTGGG +
Preference number: 4 (lower is better)
Translates to: GPEGLQDSQKRLWCRVGNLARLR*GLNHSG
Trigger: CCCAGAATGGTTCAAGCCGCATCTTAACCTTGCGAG...ATTACCCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp CTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGGCACTTTGGTCTCGCAAGGTTAAGATaGGGCTTGAACCATTCTGGG +
Preference number: 4 (lower is better)
Translates to: LLLGRPWVTFLSDEGHFGLARLR*GLNHSG
Trigger: CCCAGAATGGTTCAAGCCGCATCTTAACCTTGCGAG...ACCAAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp TGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATCCCCAAAGTCACGGTCCCTaGATCCCCCAGTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: CGVLFDSHPCYLSGYVYPQSHGP*IPQLAA
Trigger: GGCTGCCAACTGGGGGATGCAGGGACCGTGACTTTG...GGGATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp TGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATCCCATCCTGGCCTTCCTCTaGCCGCACATCCTGCAACCG +
Preference number: 4 (lower is better)
Translates to: CGVLFDSHPCYLSGYVYPILAFL*PHILQP
Trigger: CGGTTGCAGGATGTGCGGGCAGAGGAAGGCCAGGAT...GGGATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp GGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTAATTCTAGAGCAAGGAACTaGACTGGAGGCTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: GPEGLQDSQKRLWCRVGNSRARN*TGGSVT
Trigger: TGTCACAGAGCCTCCAGTGCAGTTCCTTGCTCTAGA...ATTACCCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604031.5
CDS-3UTR CCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCACGGAACCAGGCCGTaGGGATGCGGGAGTTGGGTA +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFHGTRP*GCGSWV
Trigger: TACCCAACTCCCGCATCCCCACGGCCTGGTTCCGTG...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTAGGAACCAGGTACCCTaGATGATGGTGGAGAGATCG +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCRNQVP*MMVERS
Trigger: CGATCTCTCCACCATCATCCAGGGTACCTGGTTCCT...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp AGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTTGCACGGGAGGATCTTaGACAGTGACGCCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: RGKKQWQGGGTEECGPQTCTGGS*TVTPKK
Trigger: CTTCTTCGGCGTCACTGTCCAAGATCCTCCCGTGCA...AGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTGTATATGATCCGCACTaGGGGTTCTGTGACGGTGAC +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCVYDPH*GFCDGD
Trigger: GTCACCGTCACAGAACCCCCAGTGCGGATCATATAC...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCACAATCCTCTCTGGTaGGGCTGTGACAGTGACAGT +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCHNPLW*GCDSDS
Trigger: ACTGTCACTGTCACAGCCCCACCAGAGAGGATTGTG...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp CTTAAGTGGGTATGTGTATCCCTAGAATACATGCCTGAAGGATGCCCATGGCAAACGGGCCTCCCATTGTaGCTCCAGACCACGGGGGCG +
Preference number: 4 (lower is better)
Translates to: LKWVCVSLEYMPEGCPWQTGLPL*LQTTGA
Trigger: CGCCCCCGTGGTCTGGAGCCACAATGGGAGGCCCGT...TTGCCATGGGCATCCTTCAGGCATGTATTCTAGGGATACACATACCCACTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATCCCTGGATGTGCCCATCCTaGGCCATGGACAGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: CGVLFDSHPCYLSGYVYPWMCPS*AMDRRE
Trigger: CTCTCGCCTGTCCATGGCCCAGGATGGGCACATCCA...GGGATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTGCCAGTATGACACCATaGATGAAGAGGCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCASMTP*MKRRWM
Trigger: CATCCACCGCCTCTTCATCCATGGTGTCATACTGGC...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACAGTGGATGTGACACTTaGGTCCTGGATACAGCTGTA +
Preference number: 4 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHSGCDT*VLDTAV
Trigger: TACAGCTGTATCCAGGACCCAAGTGTCACATCCACT...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAAGTGGATGTGACACTTaGGTCCTGGATACAGCTGTA +
Preference number: 4 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRASGCDT*VLDTAV
Trigger: TACAGCTGTATCCAGGACCCAAGTGTCACATCCACT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CCA 90 bp CTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGGCACTTTGGTAGCCAGAAAAGGCTGTaGTGTAGGGTGGGTAATGCA +
Preference number: 4 (lower is better)
Translates to: LLLGRPWVTFLSDEGHFGSQKRL*CRVGNA
Trigger: TGCATTACCCACCCTACACCACAGCCTTTTCTGGCT...ACCAAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp TCAAATGCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGTGTTCTTGTGGCCCTTaGACATCTCTGCCAATATGG +
Preference number: 4 (lower is better)
Translates to: SNAHRGQVRLAAEAVWGECSCGP*TSLPIW
Trigger: CCATATTGGCAGAGATGTTCAAGGGCCACAAGAACA...CTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGCATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp AAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGTCGATGCTGAAGCACTaGATCCAGTCTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: KKQWQGGGTEECGPQTMGSMLKH*IQSSEP
Trigger: GGGCTCTGAAGACTGGATTCAGTGCTTCAGCATCGA...CCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp CAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGTCGATGCTGAAGCACTaGATCCAGTCTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: QKAMAGRWDRGMWAPNYGSMLKH*IQSSEP
Trigger: GGGCTCTGAAGACTGGATTCAGTGCTTCAGCATCGA...CCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp GCCACTGCACCTGGTCTCAGCCCCATTTTTAAGGAGACTTGGCTCAAAGAGGTTCCCGCTCTGAGGTTGTaGAGGTCAACGACACCCTGT +
Preference number: 4 (lower is better)
Translates to: ATAPGLSPIFKETWLKEVPALRL*RSTTPC
Trigger: ACAGGGTGTCGTTGACCTTCACAACCTCAGAGCGGG...AACCTCTTTGAGCCAAGTCTCCTTAAAAATGGGGCTGAGACCAGGTGCAGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp TACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTATGGGATCGAGGCCCCGTaGGGAAGACCGGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: YMPEGCPWQVFLENICVYGIEAP*GRPGRP
Trigger: AGGGCGCCCCGGTCTTCCTCACGGGGCCTCGATCCC...ATAAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp CTTAAGTGGGTATGTGTATCCCTAGAATACATGCCTGAAGGATGCCCATGGCAATTGTACCAGCGCACCTaGGACCCAGCTGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: LKWVCVSLEYMPEGCPWQLYQRT*DPAGAT
Trigger: GGTGGCCCCAGCTGGGTCTCAGGTGCGCTGGTACAA...TTGCCATGGGCATCCTTCAGGCATGTATTCTAGGGATACACATACCCACTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp GCCACTGCACCTGGTCTCAGCCCCATTTTTAAGGAGACTTGGCTCAAAGAGGTTGTGGCTCTTCCACGCTaGCAAGGAAGATGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: ATAPGLSPIFKETWLKEVVALPR*QGRCGC
Trigger: ACAGCCGCATCTTCCTTGTCAGCGTGGAAGAGCCAC...AACCTCTTTGAGCCAAGTCTCCTTAAAAATGGGGCTGAGACCAGGTGCAGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp CACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAAGGATGAGTCTGTGCTaGAGACCCTTCTGCTCTATA +
Preference number: 4 (lower is better)
Translates to: HFGGGLRDSRTARKGCGVRMSLC*RPFCSI
Trigger: TATAGAGCAGAAGGGTCTGCAGCACAGACTCATCCT...TACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp CAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGTGCAGGATGAGTCTGTaGTGCAGACCCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: QKAMAGRWDRGMWAPNYGCRMSL*CRPFCS
Trigger: AGAGCAGAAGGGTCTGCAGCACAGACTCATCCTGCA...CCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp AGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTGGATCAGACGGTGTTTaGGCCCATCCATCTTCACCA +
Preference number: 4 (lower is better)
Translates to: RGKKQWQGGGTEECGPQTGSDGV*AHPSSP
Trigger: TGGTGAAGATGGATGGGCGCAAACACCGTCTGATCC...AGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp AGGTGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATCGGGGGTCCACGATGTaGACGGGAGGATCTTGGACA +
Preference number: 4 (lower is better)
Translates to: RCGVLFDSHPCYLSGYVYRGSTM*TGGSWT
Trigger: TGTCCAAGATCCTCCCGTGCACATCGTGGACCCCCG...ATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp TCAAATGCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGTCGGAAGTTATGGCATaGACGAACACATGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: SNAHRGQVRLAAEAVWGESEVMA*TNTCSR
Trigger: CCGAGAACATGTGTTCGTGCATGCCATAACTTCCGA...CTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGCATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp AAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGAACTATGGGGGCAGCTaGTACTCAGTGCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: KKQWQGGGTEECGPQTMGNYGGS*YSVPAV
Trigger: AACAGCTGGCACTGAGTAGCAGCTGCCCCCATAGTT...CCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAACTCGCAAGGTTAAGATaGGGCTTGAACCATTCTGGG +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQLARLR*GLNHSG
Trigger: CCCAGAATGGTTCAAGCCGCATCTTAACCTTGCGAG...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp AGGTGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATTCTGCCCGCACATCCTaGAACCGCCGTAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: RCGVLFDSHPCYLSGYVYSARTS*NRRRNS
Trigger: GCTGTTCCTACGGCGGTTGCAGGATGTGCGGGCAGA...ATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTATCCTGGCCTTCCTCTaGCCGCACATCCTGCAACCG +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFILAFL*PHILQP
Trigger: CGGTTGCAGGATGTGCGGGCAGAGGAAGGCCAGGAT...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp AGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAGCGCACGGCCCCCGCTaGACCCACTCGGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SKADLEICNGMQNPHGLLAHGPR*THSACL
Trigger: GAGACAGGCCGAGTGGGTGCAGCGGGGGCCGTGCGC...TAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp GAGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTGGGGATGCGGGAGTTaGGTACTTTACATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ERQKAMAGRWDRGMWAPNWGCGS*VLYIPA
Trigger: TGCTGGAATGTAAAGTACCCAACTCCCGCATCCCCA...GTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTTGGGGATGCGGGAGTTaGGTACTTTACATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCWGCGS*VLYIPA
Trigger: TGCTGGAATGTAAAGTACCCAACTCCCGCATCCCCA...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp AGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATACATCTCTGCCAATATaGGGGGTCCTGGGGGACTGT +
Preference number: 4 (lower is better)
Translates to: RQKAMAGRWDRGMWAPNYTSLPI*GVLGDC
Trigger: ACAGTCCCCCAGGACCCCCCATATTGGCAGAGATGT...ATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp AAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGAGGACCGTGTTCTTGTaGCCCTTGAACATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: KKQWQGGGTEECGPQTMGRTVFL*PLNISA
Trigger: GGCAGAGATGTTCAAGGGCCACAAGAACACGGTCCT...CCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp AAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGAGGAACCAGGTACCCTaGATGATGGTGGAGAGATCG +
Preference number: 4 (lower is better)
Translates to: KKQWQGGGTEECGPQTMGRNQVP*MMVERS
Trigger: CGATCTCTCCACCATCATCCAGGGTACCTGGTTCCT...CCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp AGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATCACTGTCCTGGACTTTaGCCTCAGGCAGGATCAGAC +
Preference number: 4 (lower is better)
Translates to: RQKAMAGRWDRGMWAPNYHCPGL*PQAGSD
Trigger: GTCTGATCCTGCCTGAGGCCAAAGTCCAGGACAGTG...ATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp CTTAAGTGGGTATGTGTATCCCTAGAATACATGCCTGAAGGATGCCCATGGCAAAGCACCAGGCGGCGATaGGGCCCCTCATTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LKWVCVSLEYMPEGCPWQSTRRR*GPSFSS
Trigger: GCTGGAGAATGAGGGGCCCCATCGCCGCCTGGTGCT...TTGCCATGGGCATCCTTCAGGCATGTATTCTAGGGATACACATACCCACTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCAGCTCCACGCGCCCTaGAGCCCCAAAATGCAGATC +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFQLHAP*SPKMQI
Trigger: GATCTGCATTTTGGGGCTCCAGGGCGCGTGGAGCTG...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR CCA 90 bp CTTAAGTGGGTATGTGTATCCCTAGAATACATGCCTGAAGGATGCCCATGGCAAGAGCCCTGCATGGGCTaGGCCTGCAGCCTGGATGCA +
Preference number: 4 (lower is better)
Translates to: LKWVCVSLEYMPEGCPWQEPCMG*ACSLDA
Trigger: TGCATCCAGGCTGCAGGCCCAGCCCATGCAGGGCTC...TTGCCATGGGCATCCTTCAGGCATGTATTCTAGGGATACACATACCCACTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp GCCACTGCACCTGGTCTCAGCCCCATTTTTAAGGAGACTTGGCTCAAAGAGGTTCCTGCATCCCCCAGTTaGCAGCCTCGCAAGGTTAAG +
Preference number: 4 (lower is better)
Translates to: ATAPGLSPIFKETWLKEVPASPS*QPRKVK
Trigger: CTTAACCTTGCGAGGCTGCCAACTGGGGGATGCAGG...AACCTCTTTGAGCCAAGTCTCCTTAAAAATGGGGCTGAGACCAGGTGCAGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAACATCAGCCAAAGCTTaGGAAAGCTCGCACTCGAAC +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQTSAKA*ESSHSN
Trigger: GTTCGAGTGCGAGCTTTCCCAAGCTTTGGCTGATGT...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CCA 90 bp CTTAAGTGGGTATGTGTATCCCTAGAATACATGCCTGAAGGATGCCCATGGCAACTCCGAACCCTCGTCTaGGCTGCCTCGGGAGCTACC +
Preference number: 4 (lower is better)
Translates to: LKWVCVSLEYMPEGCPWQLRTLV*AASGAT
Trigger: GGTAGCTCCCGAGGCAGCCCAGACGAGGGTTCGGAG...TTGCCATGGGCATCCTTCAGGCATGTATTCTAGGGATACACATACCCACTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp CTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGGCACTTTGGTAGAAAAGTTTTGCTTTaGGCAAGCTGCTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LLLGRPWVTFLSDEGHFGRKVLL*ASCCWD
Trigger: GTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCT...ACCAAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTGGCTCCAGCTTTGGGTaGGAGGTGTGGGGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFGSSFG*EVWGAV
Trigger: AACAGCACCCCACACCTCCCACCCAAAGCTGGAGCC...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp GAGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTGTTCTTGTGGCCCTTaGACATCTCTGCCAATATGG +
Preference number: 4 (lower is better)
Translates to: ERQKAMAGRWDRGMWAPNCSCGP*TSLPIW
Trigger: CCATATTGGCAGAGATGTTCAAGGGCCACAAGAACA...GTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR TCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTACCAGGTACCCTGGATaGTGGTGGAGAGATCGAGGG +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFTRYPG*WWRDRG
Trigger: CCCTCGATCTCTCCACCATCATCCAGGGTACCTGGT...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp AAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAAGGCCCCCGTCCTCGGGCTaGGCAGCAGGTAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: KADLEICNGMQNPHGLLRPPSSG*AAGSTR
Trigger: CCTGGTGCTACCTGCTGCTCAGCCCGAGGACGGGGG...CCTTAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp CTTAAGTGGGTATGTGTATCCCTAGAATACATGCCTGAAGGATGCCCATGGCAACATTGCGCAGCCAGGTaGCATCGGCATCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LKWVCVSLEYMPEGCPWQHCAAR*HRHLVG
Trigger: CCCCACCAGATGCCGATGTCACCTGGCTGCGCAATG...TTGCCATGGGCATCCTTCAGGCATGTATTCTAGGGATACACATACCCACTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGATACCATCATCGTCTaGCTTCAGCCTGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQDTIIV*LQPVDD
Trigger: ATCATCCACAGGCTGAAGGCAGACGATGATGGTATC...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTTCCCCGTCGTATACCTaGACATCCTCCAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFSPSYT*TSSRPA
Trigger: GGCAGGTCTGGAGGATGTGCAGGTATACGACGGGGA...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp TGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATCCCTGCTGCAGACCCTTCTaGTCTATACGGTACCGCAGG +
Preference number: 4 (lower is better)
Translates to: CGVLFDSHPCYLSGYVYPCCRPF*SIRYRR
Trigger: CCTGCGGTACCGTATAGAGCAGAAGGGTCTGCAGCA...GGGATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTAGGATGAGTCTGTGCTaGAGACCCTTCTGCTCTATA +
Preference number: 4 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCRMSLC*RPFCSI
Trigger: TATAGAGCAGAAGGGTCTGCAGCACAGACTCATCCT...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR GCA 90 bp TACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTATTCCGAGGCCGCCAGCTaGTGCCCGCCCTTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: YMPEGCPWQVFLENICVYSEAAS*CPPFSH
Trigger: GTGGGAGAAGGGCGGGCAGCAGCTGGCGGCCTCGGA...ATAAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTGCGCACGGCCCCCGCTaGACCCACTCGGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: YSKADLEICNGMQNPHGLAHGPR*THSACL
Trigger: GAGACAGGCCGAGTGGGTGCAGCGGGGGCCGTGCGC...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp GTTAGAAGAGATGTGTCACAAATGACAACCATTCACCAAGCTCTGTGTAAGAATCCGGCCTGCTCCAGCTaGACCCGCCCCTGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: VRRDVSQMTTIHQALCKNPACSS*TRPWLA
Trigger: GGCAAGCCAGGGGCGGGTGCAGCTGGAGCAGGCCGG...ATTCTTACACAGAGCTTGGTGAATGGTTGTCATTTGTGACACATCTCTTCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp GTTTATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGATGCACCCGCAGCACCTaGCTGGCCCCGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VYSKADLEICNGMQNPHGCTRST*LAPACS
Trigger: GGAGCAGGCCGGGGCCAGGCAGGTGCTGCGGGTGCA...TCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp AGGTGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATATAGGCGTGAGCCACTaGACCTGGTCTCAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: RCGVLFDSHPCYLSGYVYIGVSH*TWSQPH
Trigger: ATGGGGCTGAGACCAGGTGCAGTGGCTCACGCCTAT...ATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp AGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATAGGACCGTGTTCTTGTaGCCCTTGAACATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RQKAMAGRWDRGMWAPNYRTVFL*PLNISA
Trigger: GGCAGAGATGTTCAAGGGCCACAAGAACACGGTCCT...ATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTTGCACCGGGCTCTCTTaGATTGTGAGGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFCTGLS*IVRAAE
Trigger: CTCAGCTGCCCTCACAATCCAAGAGAGCCCGGTGCA...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp AGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGCGGCTGAAGCAGTCTaGGGAGAGGCAAAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: RQKAMAGRWDRGMWAPNYAAEAV*GEAKSN
Trigger: ATTGCTTTTTGCCTCTCCCCAGACTGCTTCAGCCGC...ATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CCA 90 bp TACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTATACGGCACTGAGCGTCTaGCCCGCCGAGTTGCGCGCG +
Preference number: 4 (lower is better)
Translates to: YMPEGCPWQVFLENICVYTALSV*PAELRA
Trigger: CGCGCGCAACTCGGCGGGCCAGACGCTCAGTGCCGT...ATAAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCGGGGGCCCTCGGCATaGAGCTCTAGGCCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: YSKADLEICNGMQNPHGLRGPSA*SSRPSP
Trigger: GGGCGAGGGCCTAGAGCTCCATGCCGAGGGCCCCCG...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTTCACACCGGAACGTaGCATCATCGCCCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFLHTGT*HHRPRG
Trigger: TCCACGAGGGCGATGATGCCACGTTCCGGTGTGAAG...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCCTGCATCCCCCAGTTaGCAGCCTCGCAAGGTTAAG +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFPASPS*QPRKVK
Trigger: CTTAACCTTGCGAGGCTGCCAACTGGGGGATGCAGG...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp AGGTGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATCCTGCATCCCCCAGTTaGCAGCCTCGCAAGGTTAAG +
Preference number: 4 (lower is better)
Translates to: RCGVLFDSHPCYLSGYVYPASPS*QPRKVK
Trigger: CTTAACCTTGCGAGGCTGCCAACTGGGGGATGCAGG...ATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTTCTGTCTCTCGAACATaGAGCCGGGCACTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFSVSRT*SRALVA
Trigger: GGCCACAAGTGCCCGGCTCCATGTTCGAGAGACAGA...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTTCGAGACACACATCCTaGCCTTCCTCTGCCCGCACA +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFSRHTS*PSSART
Trigger: TGTGCGGGCAGAGGAAGGCCAGGATGTGTGTCTCGA...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp AGGTTAACTTGCATGAGGTCACATAGGAAACAGAGGGCTCCAGCTTTGGGTGGGTCGATGCTGAAGCACTaGATCCAGTCTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: RLTCMRSHRKQRAPALGGSMLKH*IQSSEP
Trigger: GGGCTCTGAAGACTGGATTCAGTGCTTCAGCATCGA...CCCACCCAAAGCTGGAGCCCTCTGTTTCCTATGTGACCTCATGCAAGTTAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp AGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATCGGCTTTCTCGATGCTaGAGCACTGAATCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: RQKAMAGRWDRGMWAPNYRLSRC*STESSL
Trigger: AAGACTGGATTCAGTGCTTCAGCATCGAGAAAGCCG...ATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp CAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGATACCATCATCGTCTaGCTTCAGCCTGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: QKAMAGRWDRGMWAPNYGDTIIV*LQPVDD
Trigger: ATCATCCACAGGCTGAAGGCAGACGATGATGGTATC...CCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR GCA 90 bp AGGTTAACTTGCATGAGGTCACATAGGAAACAGAGGGCTCCAGCTTTGGGTGGGGGATCAGACGGTGTTTaGGCCCATCCATCTTCACCA +
Preference number: 4 (lower is better)
Translates to: RLTCMRSHRKQRAPALGGGSDGV*AHPSSP
Trigger: TGGTGAAGATGGATGGGCGCAAACACCGTCTGATCC...CCCACCCAAAGCTGGAGCCCTCTGTTTCCTATGTGACCTCATGCAAGTTAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTGCCACATACACCTTaGCGCTGGGATACACGATCC +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFLPHTP*RWDTRS
Trigger: GGATCGTGTATCCCAGCGGCAAGGTGTATGTGGCAG...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp AAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAAGGAGGCCCTCGCCCTCCTaGACGGGCCTCCCATTGTGG +
Preference number: 4 (lower is better)
Translates to: KADLEICNGMQNPHGLLRRPSPS*TGLPLW
Trigger: CCACAATGGGAGGCCCGTGCAGGAGGGCGAGGGCCT...CCTTAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp GCCACTGCACCTGGTCTCAGCCCCATTTTTAAGGAGACTTGGCTCAAAGAGGTTGGGTTCTTGCTATGTTaGCCAGGATGGCCTCGAACT +
Preference number: 4 (lower is better)
Translates to: ATAPGLSPIFKETWLKEVGFLLC*PGWPRT
Trigger: AGTTCGAGGCCATCCTGGGCAACATAGCAAGAACCC...AACCTCTTTGAGCCAAGTCTCCTTAAAAATGGGGCTGAGACCAGGTGCAGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp CTTAAGTGGGTATGTGTATCCCTAGAATACATGCCTGAAGGATGCCCATGGCAACTCTCGGGTGACCCCTaGAAGGACCAGGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: LKWVCVSLEYMPEGCPWQLSGDP*KDQGMH
Trigger: ATGCATGCCCTGGTCCTTCCAGGGGTCACCCGAGAG...TTGCCATGGGCATCCTTCAGGCATGTATTCTAGGGATACACATACCCACTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp AGGTTAACTTGCATGAGGTCACATAGGAAACAGAGGGCTCCAGCTTTGGGTGGGAGGACCGTGTTCTTGTaGCCCTTGAACATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RLTCMRSHRKQRAPALGGRTVFL*PLNISA
Trigger: GGCAGAGATGTTCAAGGGCCACAAGAACACGGTCCT...CCCACCCAAAGCTGGAGCCCTCTGTTTCCTATGTGACCTCATGCAAGTTAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp AAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAAGGCCGGAGTCCTCGAGCTaGACAGCGGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: KADLEICNGMQNPHGLLRPESSS*TAGSTR
Trigger: CCTGGTGCTGCCCGCTGTCCAGCTCGAGGACTCCGG...CCTTAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTATCCGGAGTCCTCGAGCTaGACAGCGGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: YMPEGCPWQVFLENICVYPESSS*TAGSTR
Trigger: CCTGGTGCTGCCCGCTGTCCAGCTCGAGGACTCCGG...ATAAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTATACGGGCCTCCCATTGTaGCTCCAGACCACGGGGGCG +
Preference number: 4 (lower is better)
Translates to: YMPEGCPWQVFLENICVYTGLPL*LQTTGA
Trigger: CGCCCCCGTGGTCTGGAGCCACAATGGGAGGCCCGT...ATAAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTATGCTGGGCCTGCAGCCTaGATGCAGAGGACTCGGCGG +
Preference number: 4 (lower is better)
Translates to: YMPEGCPWQVFLENICVYAGPAA*MQRTRR
Trigger: CCGCCGAGTCCTCTGCATCCAGGCTGCAGGCCCAGC...ATAAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTGACATCGGCATCTGGTaGGGAGACTTCACACCGGAA +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFDIGIW*GDFTPE
Trigger: TTCCGGTGTGAAGTCTCCCCACCAGATGCCGATGTC...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp AAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAAGGGACAGGCGAGAGTCGTaGGGCAGGGGCTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: KADLEICNGMQNPHGLLRDRRES*GRGCPP
Trigger: AGGTGGGCAGCCCCTGCCCCACGACTCTCGCCTGTC...CCTTAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp AATACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTGACAGGCGAGAGTCGTaGGGCAGGGGCTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: NTCLKDAHGKSFWRIFVFDRRES*GRGCPP
Trigger: AGGTGGGCAGCCCCTGCCCCACGACTCTCGCCTGTC...AAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp AGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAACTCACGCCTCACGCTaGGCCTGGCCAGGGTGCGAT +
Preference number: 4 (lower is better)
Translates to: SKADLEICNGMQNPHGLLTHASR*AWPGCD
Trigger: ATCGCACCCTGGCCAGGCTCAGCGTGAGGCGTGAGT...TAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp AATACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTACTCACGCCTCACGCTaGGCCTGGCCAGGGTGCGAT +
Preference number: 4 (lower is better)
Translates to: NTCLKDAHGKSFWRIFVFTHASR*AWPGCD
Trigger: ATCGCACCCTGGCCAGGCTCAGCGTGAGGCGTGAGT...AAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp AAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAAGGGCAGGTGTAGAGCCCTaGATGGGCTGGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KADLEICNGMQNPHGLLRAGVEP*MGWACS
Trigger: GCTGCAGGCCCAGCCCATGCAGGGCTCTACACCTGC...CCTTAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp AGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTATGGGGCTCCGGGGGCTaGTCCAGACTGGCAGGTGTA +
Preference number: 4 (lower is better)
Translates to: SKADLEICNGMQNPHGLLWGSGG*SRLAGV
Trigger: TACACCTGCCAGTCTGGAGCAGCCCCCGGAGCCCCA...TAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp AAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAAGGTGGGGCTCCGGGGGCTaGTCCAGACTGGCAGGTGTA +
Preference number: 4 (lower is better)
Translates to: KADLEICNGMQNPHGLLRWGSGG*SRLAGV
Trigger: TACACCTGCCAGTCTGGAGCAGCCCCCGGAGCCCCA...CCTTAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp AGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTATGTGGCCGTGCTCCCTaGCCGCAAAGTCACGGTCCC +
Preference number: 4 (lower is better)
Translates to: SKADLEICNGMQNPHGLLCGRAP*PQSHGP
Trigger: GGGACCGTGACTTTGCGGGCAGGGAGCACGGCCACA...TAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp GTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCAATCCGCTCCGTGCCCCCTaGACCCGCAGCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VFLENICVYSKADLEICNPLRAP*TRSTCL
Trigger: CAGGCAGGTGCTGCGGGTGCAGGGGGCACGGAGCGG...ATTGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp GGGCACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTAAATATGCAATGGAATaGAAAATCCACATGGACTTC +
Preference number: 4 (lower is better)
Translates to: GHFGGGLRDSRTARKGCGKYAME*KIHMDF
Trigger: GAAGTCCATGTGGATTTTGCATTCCATTGCATATTT...ACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp CTTAAGTGGGTATGTGTATCCCTAGAATACATGCCTGAAGGATGCCCATGGCAAATAGGCGTGAGCCACTaGACCTGGTCTCAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: LKWVCVSLEYMPEGCPWQIGVSH*TWSQPH
Trigger: ATGGGGCTGAGACCAGGTGCAGTGGCTCACGCCTAT...TTGCCATGGGCATCCTTCAGGCATGTATTCTAGGGATACACATACCCACTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp CTTAAGTGGGTATGTGTATCCCTAGAATACATGCCTGAAGGATGCCCATGGCAATCTGCCTTCAGCCTGTaGATGATGAGGCGCCGGACA +
Preference number: 4 (lower is better)
Translates to: LKWVCVSLEYMPEGCPWQSAFSL*MMRRRT
Trigger: TGTCCGGCGCCTCATCATCCACAGGCTGAAGGCAGA...TTGCCATGGGCATCCTTCAGGCATGTATTCTAGGGATACACATACCCACTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp CAAATGACAACCATTCACCAAGCTCTGTGTAAGAATTTTCATGTTATCTCAGTTCCCCCGTCTGAGGGCTaGGTGGCGGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: QMTTIHQALCKNFHVISVPPSEG*VAGSTR
Trigger: CCTGGTGCTGCCCGCCACCCAGCCCTCAGACGGGGG...AACTGAGATAACATGAAAATTCTTACACAGAGCTTGGTGAATGGTTGTCATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp CAAATGACAACCATTCACCAAGCTCTGTGTAAGAATTTTCATGTTATCTCAGTTTCGGCGCGGCCCGGCTaGAGCGCGAAGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QMTTIHQALCKNFHVISVSARPG*SAKWLL
Trigger: CAGCAGCCACTTCGCGCTCCAGCCGGGCCGCGCCGA...AACTGAGATAACATGAAAATTCTTACACAGAGCTTGGTGAATGGTTGTCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp CCACTGCACCTGGTCTCAGCCCCATTTTTAAGGAGACTTGGCTCAAAGAGGTTAGTATATGATCCGCACTaGGGGTTCTGTGACGGTGAC +
Preference number: 4 (lower is better)
Translates to: PLHLVSAPFLRRLGSKRLVYDPH*GFCDGD
Trigger: GTCACCGTCACAGAACCCCCAGTGCGGATCATATAC...TAACCTCTTTGAGCCAAGTCTCCTTAAAAATGGGGCTGAGACCAGGTGCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCACAATCCTCTCTGGTaGGGCTGTGACAGTGACAGT +
Preference number: 4 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFHNPLW*GCDSDS
Trigger: ACTGTCACTGTCACAGCCCCACCAGAGAGGATTGTG...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR CCA 90 bp AAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAAGGCACCTGAGACCCAGCTaGGGCCACCTCACAGCGCAG +
Preference number: 4 (lower is better)
Translates to: KADLEICNGMQNPHGLLRHLRPS*GHLTAQ
Trigger: CTGCGCTGTGAGGTGGCCCCAGCTGGGTCTCAGGTG...CCTTAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR CCA 90 bp GTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCAATCCGGCGTCCTCAGGCTaGGCGTGGGGCAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: VFLENICVYSKADLEICNPASSG*AWGRVR
Trigger: CCTGACCCTGCCCCACGCCCAGCCTGAGGACGCCGG...ATTGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTACGGGCCTCCCATTGTaGCTCCAGACCACGGGGGCG +
Preference number: 4 (lower is better)
Translates to: YSKADLEICNGMQNPHGLTGLPL*LQTTGA
Trigger: CGCCCCCGTGGTCTGGAGCCACAATGGGAGGCCCGT...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp CTTAAGTGGGTATGTGTATCCCTAGAATACATGCCTGAAGGATGCCCATGGCAAGGTGACATCGGCATCTaGTGGGGAGACTTCACACCG +
Preference number: 4 (lower is better)
Translates to: LKWVCVSLEYMPEGCPWQGDIGI*WGDFTP
Trigger: CGGTGTGAAGTCTCCCCACCAGATGCCGATGTCACC...TTGCCATGGGCATCCTTCAGGCATGTATTCTAGGGATACACATACCCACTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp AGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTATGGGCCATCTCCACCTaGGGCCCTGGAGTGACGACG +
Preference number: 4 (lower is better)
Translates to: SKADLEICNGMQNPHGLLWAIST*GPGVTT
Trigger: CGTCGTCACTCCAGGGCCCCAGGTGGAGATGGCCCA...TAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTATTGGGCCATCTCCACCTaGGGCCCTGGAGTGACGACG +
Preference number: 4 (lower is better)
Translates to: YMPEGCPWQVFLENICVYWAIST*GPGVTT
Trigger: CGTCGTCACTCCAGGGCCCCAGGTGGAGATGGCCCA...ATAAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp AATACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTGCCCATCCTGGGCCATaGACAGGCGAGAGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: NTCLKDAHGKSFWRIFVFAHPGP*TGESRG
Trigger: CCCACGACTCTCGCCTGTCCATGGCCCAGGATGGGC...AAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp TACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTATGCTCCAGCCGGTAGATaGATGGGGTCTCGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: YMPEGCPWQVFLENICVYAPAGR*MGSREL
Trigger: CAGCTCCCGAGACCCCATTCATCTACCGGCTGGAGC...ATAAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp CAAATGACAACCATTCACCAAGCTCTGTGTAAGAATTTTCATGTTATCTCAGTTAAACTCGCCCCCGTCTaGGGGCTGGGTGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: QMTTIHQALCKNFHVISVKLAPV*GLGGGQ
Trigger: CTGCCCGCCACCCAGCCCTCAGACGGGGGCGAGTTT...AACTGAGATAACATGAAAATTCTTACACAGAGCTTGGTGAATGGTTGTCATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp TACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTATCAGCTGCAGGGCATCTaGTGCCTCCACTTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: YMPEGCPWQVFLENICVYQLQGI*CLHFQP
Trigger: GGGCTGGAAGTGGAGGCATCAGATGCCCTGCAGCTG...ATAAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp AAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAAGGCGCCCTCGTGGACAGTaGGTGGTGTCAGCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: KADLEICNGMQNPHGLLRRPRGQ*VVSAPR
Trigger: TCTCGGAGCTGACACCACTCACTGTCCACGAGGGCG...CCTTAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCCCTCGGCACCCAGCTaGAGGGCATCTGATGCCTCC +
Preference number: 4 (lower is better)
Translates to: YSKADLEICNGMQNPHGLPSAPS*RASDAS
Trigger: GGAGGCATCAGATGCCCTGCAGCTGGGTGCCGAGGG...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR GCA 90 bp GTTTATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGATGTGGCCGTGCTCCCTaGCCGCAAAGTCACGGTCCC +
Preference number: 4 (lower is better)
Translates to: VYSKADLEICNGMQNPHGCGRAP*PQSHGP
Trigger: GGGACCGTGACTTTGCGGGCAGGGAGCACGGCCACA...TCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp AATACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTGGGCACTTGTGGCCGTaGTCCCTGCCCGCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: NTCLKDAHGKSFWRIFVFGHLWP*SLPAKS
Trigger: TGACTTTGCGGGCAGGGAGCACGGCCACAAGTGCCC...AAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp GTTAGAAGAGATGTGTCACAAATGACAACCATTCACCAAGCTCTGTGTAAGAATCCTGGCCCGGAGAGGTaGACCACCAGCTCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: VRRDVSQMTTIHQALCKNPGPER*TTSSRS
Trigger: GGACCTAGAGCTGGTGGTGCACCTCTCCGGGCCAGG...ATTCTTACACAGAGCTTGGTGAATGGTTGTCATTTGTGACACATCTCTTCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp TACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTATTGGCCTGAGCTGCTCTaGCAGATGACCGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: YMPEGCPWQVFLENICVYWPELL*QMTGSS
Trigger: GGAGCTGCCGGTCATCTGCCAGAGCAGCTCAGGCCA...ATAAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp CTTAAGTGGGTATGTGTATCCCTAGAATACATGCCTGAAGGATGCCCATGGCAACATACACCTTGCCGCTaGGATACACGATCCACGAGG +
Preference number: 4 (lower is better)
Translates to: LKWVCVSLEYMPEGCPWQHTPCR*DTRSTR
Trigger: CCTCGTGGATCGTGTATCCCAGCGGCAAGGTGTATG...TTGCCATGGGCATCCTTCAGGCATGTATTCTAGGGATACACATACCCACTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCACCTGAGACCCAGCTaGGGCCACCTCACAGCGCAG +
Preference number: 4 (lower is better)
Translates to: YSKADLEICNGMQNPHGLHLRPS*GHLTAQ
Trigger: CTGCGCTGTGAGGTGGCCCCAGCTGGGTCTCAGGTG...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR CCA 90 bp AAGTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCAGGAGCCGGGCACTTGTaGCCGTGCTCCCTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: KSFWRIFVFIAKPTWKYAGAGHL*PCSLPA
Trigger: TGCGGGCAGGGAGCACGGCCACAAGTGCCCGGCTCC...TGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTGCCCATCCTGGGCCATaGACAGGCGAGAGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: YSKADLEICNGMQNPHGLAHPGP*TGESRG
Trigger: CCCACGACTCTCGCCTGTCCATGGCCCAGGATGGGC...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATTCCCTGCTACTTAAGTaGGTATGTGTATCCCTAGAA +
Preference number: 4 (lower is better)
Translates to: FALGKLLLGRPWVTFLSDSLLLK*VCVSLE
Trigger: TTCTAGGGATACACATACCCACTTAAGTAGCAGGGA...ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCATTGCGCAGCCAGGTaGCATCGGCATCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: YSKADLEICNGMQNPHGLHCAAR*HRHLVG
Trigger: CCCCACCAGATGCCGATGTCACCTGGCTGCGCAATG...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp GTTAGAAGAGATGTGTCACAAATGACAACCATTCACCAAGCTCTGTGTAAGAATCACATCCTCCAGACCTaGCACCAGGCGAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: VRRDVSQMTTIHQALCKNHILQT*HQASCG
Trigger: CCCACAGCTCGCCTGGTGGCAGGTCTGGAGGATGTG...ATTCTTACACAGAGCTTGGTGAATGGTTGTCATTTGTGACACATCTCTTCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp TACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTATGCACCGCTGTCCTGGTaGTTGACGGCATGCAGGATG +
Preference number: 4 (lower is better)
Translates to: YMPEGCPWQVFLENICVYAPLSW*LTACRM
Trigger: CATCCTGCATGCCGTCAAGCACCAGGACAGCGGTGC...ATAAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTATCCAGGGAGCGGGCTaGCGGGTGCACAATCCTCTC +
Preference number: 4 (lower is better)
Translates to: YSKADLEICNGMQNPHGLIQGAG*RVHNPL
Trigger: GAGAGGATTGTGCACCCGGCAGCCCGCTCCCTGGAT...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR GCA 90 bp GTTTATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGAGGGCACTTGTGGCCGTaGTCCCTGCCCGCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: VYSKADLEICNGMQNPHGGHLWP*SLPAKS
Trigger: TGACTTTGCGGGCAGGGAGCACGGCCACAAGTGCCC...TCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp GGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTAATAAATATGCAATGGAATaGAAAATCCACATGGACTTC +
Preference number: 4 (lower is better)
Translates to: GPEGLQDSQKRLWCRVGNKYAME*KIHMDF
Trigger: GAAGTCCATGTGGATTTTGCATTCCATTGCATATTT...ATTACCCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp CTTAAGTGGGTATGTGTATCCCTAGAATACATGCCTGAAGGATGCCCATGGCAAGGGTTCTTGCTATGTTaGCCAGGATGGCCTCGAACT +
Preference number: 4 (lower is better)
Translates to: LKWVCVSLEYMPEGCPWQGFLLC*PGWPRT
Trigger: AGTTCGAGGCCATCCTGGGCAACATAGCAAGAACCC...TTGCCATGGGCATCCTTCAGGCATGTATTCTAGGGATACACATACCCACTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCCTCCTCTCCATCCTTaGTCCAGCGCACCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: YSKADLEICNGMQNPHGLPPLHP*SSAPLP
Trigger: GGGCAGAGGTGCGCTGGACCAAGGATGGAGAGGAGG...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp GAGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATTTGCATGTTTATTaGTTTAACACAGGGGTCGCA +
Preference number: 4 (lower is better)
Translates to: ERQKAMAGRWDRGMWAPNYLHVY*FNTGVA
Trigger: TGCGACCCCTGTGTTAAACCAATAAACATGCAAATA...GTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR CCA 90 bp AGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTACAGCTTCACCAGCAGTaGCTCAGCCACCTGGACGGT +
Preference number: 4 (lower is better)
Translates to: SKADLEICNGMQNPHGLLQLHQQ*LSHLDG
Trigger: ACCGTCCAGGTGGCTGAGCCACTGCTGGTGAAGCTG...TAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000604031.5
CDS-3UTR CCA 90 bp AATACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTGGCTCCAGCTTTGGGTaGGAGGTGTGGGGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: NTCLKDAHGKSFWRIFVFGSSFG*EVWGAV
Trigger: AACAGCACCCCACACCTCCCACCCAAAGCTGGAGCC...AAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp CAAATGACAACCATTCACCAAGCTCTGTGTAAGAATTTTCATGTTATCTCAGTTGATTGTGAGGGCAGCTaGGTCCTGCACGCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: QMTTIHQALCKNFHVISVDCEGS*VLHAGA
Trigger: TGCCCCGGCGTGCAGGACTCAGCTGCCCTCACAATC...AACTGAGATAACATGAAAATTCTTACACAGAGCTTGGTGAATGGTTGTCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp AATACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTCGGGAAGTCCACCCTTaGGAGCTCACAAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: NTCLKDAHGKSFWRIFVFREVHP*ELTSQH
Trigger: GTGCTGACTTGTGAGCTCTCAAGGGTGGACTTCCCG...AAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp AATACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTTGGGACGGCCATGGGTaGCTTTTCTCAGCGATGAGG +
Preference number: 4 (lower is better)
Translates to: NTCLKDAHGKSFWRIFVFWDGHG*LFSAMR
Trigger: CCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCA...AAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp CCACTGCACCTGGTCTCAGCCCCATTTTTAAGGAGACTTGGCTCAAAGAGGTTAGAGATGTGTCACAAATaGCAACCATTCACCAAGCTC +
Preference number: 4 (lower is better)
Translates to: PLHLVSAPFLRRLGSKRLEMCHK*QPFTKL
Trigger: GAGCTTGGTGAATGGTTGTCATTTGTGACACATCTC...TAACCTCTTTGAGCCAAGTCTCCTTAAAAATGGGGCTGAGACCAGGTGCAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTGTGCCCTCTTCGATCTaGTCGTACTTGCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: YSKADLEICNGMQNPHGLVPSSI*SYLRQG
Trigger: GCCCTGCCGCAAGTACGAGCAGATCGAAGAGGGCAC...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTACAGTGTCTTCCTTCTaGAGGAGCAGCGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: YSKADLEICNGMQNPHGLTVSSF*RSSAGL
Trigger: GAGCCCCGCGCTGCTCCTGCAGAAGGAAGACACTGT...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp GTTTATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGAGGAGCGCGAAGTGGCTaGTGTCCCACACTTCGTCCA +
Preference number: 4 (lower is better)
Translates to: VYSKADLEICNGMQNPHGGARSG*CPTLRP
Trigger: TGGACGAAGTGTGGGACAGCAGCCACTTCGCGCTCC...TCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp AGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTATCTTTCACGTGCAGCTaGACGGCACTGAGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: SKADLEICNGMQNPHGLLSFTCS*TALSVW
Trigger: CCAGACGCTCAGTGCCGTGCAGCTGCACGTGAAAGA...TAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp AAGTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCAGCAGGTGTAGAGCCCTaGATGGGCTGGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KSFWRIFVFIAKPTWKYAAGVEP*MGWACS
Trigger: GCTGCAGGCCCAGCCCATGCAGGGCTCTACACCTGC...TGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCAAAGTCACGGTCCCTaGATCCCCCAGTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: YSKADLEICNGMQNPHGLQSHGP*IPQLAA
Trigger: GGCTGCCAACTGGGGGATGCAGGGACCGTGACTTTG...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTATCCTGGCCTTCCTCTaGCCGCACATCCTGCAACCG +
Preference number: 4 (lower is better)
Translates to: YSKADLEICNGMQNPHGLILAFL*PHILQP
Trigger: CGGTTGCAGGATGTGCGGGCAGAGGAAGGCCAGGAT...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp AAGTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCAAACCCTCGTCTGGGCTaGCTCGGGAGCTACCACCCG +
Preference number: 4 (lower is better)
Translates to: KSFWRIFVFIAKPTWKYANPRLG*LGSYHP
Trigger: CGGGTGGTAGCTCCCGAGGCAGCCCAGACGAGGGTT...TGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp AGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAGTGGGAGGTGTGGGGTaGTGTTTGACAGCCATCCCT +
Preference number: 4 (lower is better)
Translates to: SKADLEICNGMQNPHGLLVGGVG*CLTAIP
Trigger: AGGGATGGCTGTCAAACAGCACCCCACACCTCCCAC...TAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTATAACTCGCCACTGTCCTaGACTTTGGCCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: YMPEGCPWQVFLENICVYNSPLS*TLASGR
Trigger: CCTGCCTGAGGCCAAAGTCCAGGACAGTGGCGAGTT...ATAAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp AGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTACTCGTGGACAGTGAGTaGTGTCAGCTCCGAGACCAG +
Preference number: 4 (lower is better)
Translates to: SKADLEICNGMQNPHGLLLVDSE*CQLRDQ
Trigger: CTGGTCTCGGAGCTGACACCACTCACTGTCCACGAG...TAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp AAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAAGGCTCGTGGACAGTGAGTaGTGTCAGCTCCGAGACCAG +
Preference number: 4 (lower is better)
Translates to: KADLEICNGMQNPHGLLRLVDSE*CQLRDQ
Trigger: CTGGTCTCGGAGCTGACACCACTCACTGTCCACGAG...CCTTAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp AAGTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCACTCCACCTGGGGCCCTaGAGTGACGACGGCCCCATT +
Preference number: 4 (lower is better)
Translates to: KSFWRIFVFIAKPTWKYALHLGP*SDDGPI
Trigger: AATGGGGCCGTCGTCACTCCAGGGCCCCAGGTGGAG...TGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTTGGATGTGCCCATCCTaGGCCATGGACAGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: YSKADLEICNGMQNPHGLWMCPS*AMDRRE
Trigger: CTCTCGCCTGTCCATGGCCCAGGATGGGCACATCCA...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp GTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCAATCGCCCTCGTGGACAGTaGGTGGTGTCAGCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: VFLENICVYSKADLEICNRPRGQ*VVSAPR
Trigger: TCTCGGAGCTGACACCACTCACTGTCCACGAGGGCG...ATTGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp AAGTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCAACTTTGGTGGGGGCCTaGGGGACTCCAGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: KSFWRIFVFIAKPTWKYATLVGA*GTPGQP
Trigger: TGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGT...TGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp AATACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTGTGTGGGGTGCTGTTTaGCAGCCATCCCTGCTACTT +
Preference number: 4 (lower is better)
Translates to: NTCLKDAHGKSFWRIFVFVWGAV*QPSLLL
Trigger: AAGTAGCAGGGATGGCTGTCAAACAGCACCCCACAC...AAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp GTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCAATTCTCGGGCTCGGGCTTaGCCATCACGTAGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: VFLENICVYSKADLEICNSRARA*PSRSSG
Trigger: TCCGCTGCTACGTGATGGGCAAGCCCGAGCCCGAGA...ATTGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp AAGTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCACGGGGCTCTTTCACGTaGAGCTGCACGGCACTGAGC +
Preference number: 4 (lower is better)
Translates to: KSFWRIFVFIAKPTWKYARGSFT*SCTALS
Trigger: GCTCAGTGCCGTGCAGCTGCACGTGAAAGAGCCCCG...TGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp TACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTATGTGCACAATCCTCTCTaGTGGGGCTGTGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: YMPEGCPWQVFLENICVYVHNPL*WGCDSD
Trigger: GTCACTGTCACAGCCCCACCAGAGAGGATTGTGCAC...ATAAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTTCACACCGGAACGTaGCATCATCGCCCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: YSKADLEICNGMQNPHGLLHTGT*HHRPRG
Trigger: TCCACGAGGGCGATGATGCCACGTTCCGGTGTGAAG...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp GTTAGAAGAGATGTGTCACAAATGACAACCATTCACCAAGCTCTGTGTAAGAATTCGAGACACACATCCTaGCCTTCCTCTGCCCGCACA +
Preference number: 4 (lower is better)
Translates to: VRRDVSQMTTIHQALCKNSRHTS*PSSART
Trigger: TGTGCGGGCAGAGGAAGGCCAGGATGTGTGTCTCGA...ATTCTTACACAGAGCTTGGTGAATGGTTGTCATTTGTGACACATCTCTTCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp AAGTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCAGGCATGCATGTGGCCTaGGCTGCTCTGGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: KSFWRIFVFIAKPTWKYAGMHVA*AALADD
Trigger: GTCATCTGCCAGAGCAGCTCAGGCCACATGCATGCC...TGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp CTTAAGTGGGTATGTGTATCCCTAGAATACATGCCTGAAGGATGCCCATGGCAATTTGACAGCCATCCCTaGTACTTAAGTGGGTATGTG +
Preference number: 4 (lower is better)
Translates to: LKWVCVSLEYMPEGCPWQFDSHP*YLSGYV
Trigger: CACATACCCACTTAAGTAGCAGGGATGGCTGTCAAA...TTGCCATGGGCATCCTTCAGGCATGTATTCTAGGGATACACATACCCACTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp GTTAGAAGAGATGTGTCACAAATGACAACCATTCACCAAGCTCTGTGTAAGAATCACTGTCCTGGACTTTaGCCTCAGGCAGGATCAGAC +
Preference number: 4 (lower is better)
Translates to: VRRDVSQMTTIHQALCKNHCPGL*PQAGSD
Trigger: GTCTGATCCTGCCTGAGGCCAAAGTCCAGGACAGTG...ATTCTTACACAGAGCTTGGTGAATGGTTGTCATTTGTGACACATCTCTTCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTTGCACGGGAGGATCTTaGACAGTGACGCCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: YSKADLEICNGMQNPHGLCTGGS*TVTPKK
Trigger: CTTCTTCGGCGTCACTGTCCAAGATCCTCCCGTGCA...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp AGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTACACAATCCTCTCTGGTaGGGCTGTGACAGTGACAGT +
Preference number: 4 (lower is better)
Translates to: SKADLEICNGMQNPHGLLHNPLW*GCDSDS
Trigger: ACTGTCACTGTCACAGCCCCACCAGAGAGGATTGTG...TAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR CCA 90 bp GTTTATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGAGTGCACAATCCTCTCTaGTGGGGCTGTGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: VYSKADLEICNGMQNPHGVHNPL*WGCDSD
Trigger: GTCACTGTCACAGCCCCACCAGAGAGGATTGTGCAC...TCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR CCA 90 bp GTTTATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGAAGCAAGGAACTGCACTaGAGGCTCAGCCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: VYSKADLEICNGMQNPHGSKELH*RLSQDD
Trigger: GTCATCCTGGCTGAGCCTCCAGTGCAGTTCCTTGCT...TCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR CCA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTGACATCGGCATCTGGTaGGGAGACTTCACACCGGAA +
Preference number: 4 (lower is better)
Translates to: YSKADLEICNGMQNPHGLDIGIW*GDFTPE
Trigger: TTCCGGTGTGAAGTCTCCCCACCAGATGCCGATGTC...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp CAAATGACAACCATTCACCAAGCTCTGTGTAAGAATTTTCATGTTATCTCAGTTTGGATGAAGAGGCGGTaGATGTGCCCATCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QMTTIHQALCKNFHVISVWMKRR*MCPSWA
Trigger: GGCCCAGGATGGGCACATCCACCGCCTCTTCATCCA...AACTGAGATAACATGAAAATTCTTACACAGAGCTTGGTGAATGGTTGTCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp AGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAGCCAGTATGACACCATaGATGAAGAGGCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: SKADLEICNGMQNPHGLLASMTP*MKRRWM
Trigger: CATCCACCGCCTCTTCATCCATGGTGTCATACTGGC...TAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp AAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAAGGGCCAGTATGACACCATaGATGAAGAGGCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: KADLEICNGMQNPHGLLRASMTP*MKRRWM
Trigger: CATCCACCGCCTCTTCATCCATGGTGTCATACTGGC...CCTTAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp GTTAGAAGAGATGTGTCACAAATGACAACCATTCACCAAGCTCTGTGTAAGAATCAGCTTCACCAGCAGTaGCTCTTCCACGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: VRRDVSQMTTIHQALCKNQLHQQ*LFHADK
Trigger: CTTGTCAGCGTGGAAGAGCCACTGCTGGTGAAGCTG...ATTCTTACACAGAGCTTGGTGAATGGTTGTCATTTGTGACACATCTCTTCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp TACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTATCCTAGAATACATGCCTaGAGGATGCCCATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: YMPEGCPWQVFLENICVYPRIHA*RMPMAS
Trigger: ACTTGCCATGGGCATCCTTCAGGCATGTATTCTAGG...ATAAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp AATACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTCAGGCTGGAATGCCGTaGCATGATCATAGCTCACTA +
Preference number: 4 (lower is better)
Translates to: NTCLKDAHGKSFWRIFVFQAGMP*HDHSSL
Trigger: TAGTGAGCTATGATCATGTCACGGCATTCCAGCCTG...AAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp GTTTATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGAAAGGTGATGGCCTCATaGCGGGTCTCACACACATAC +
Preference number: 4 (lower is better)
Translates to: VYSKADLEICNGMQNPHGKVMAS*RVSHTY
Trigger: GTATGTGTGTGAGACCCGGCATGAGGCCATCACCTT...TCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR CCA 90 bp AATACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTAGCCAGAAAAGGCTGTaGTGTAGGGTGGGTAATGCA +
Preference number: 4 (lower is better)
Translates to: NTCLKDAHGKSFWRIFVFSQKRL*CRVGNA
Trigger: TGCATTACCCACCCTACACCACAGCCTTTTCTGGCT...AAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR TCA 90 bp AAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAAGGTGTTCTTGTGGCCCTTaGACATCTCTGCCAATATGG +
Preference number: 4 (lower is better)
Translates to: KADLEICNGMQNPHGLLRCSCGP*TSLPIW
Trigger: CCATATTGGCAGAGATGTTCAAGGGCCACAAGAACA...CCTTAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR TCA 90 bp AAGTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCACCTCACAGGCCAGCATaGCACACTCGGAAGTTATGG +
Preference number: 4 (lower is better)
Translates to: KSFWRIFVFIAKPTWKYAPHRPA*HTRKLW
Trigger: CCATAACTTCCGAGTGTGTCATGCTGGCCTGTGAGG...TGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp TACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTATGATACCATCATCGTCTaGCTTCAGCCTGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: YMPEGCPWQVFLENICVYDTIIV*LQPVDD
Trigger: ATCATCCACAGGCTGAAGGCAGACGATGATGGTATC...ATAAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp AAGTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCATCTAGAGCAAGGAACTaGACTGGAGGCTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: KSFWRIFVFIAKPTWKYASRARN*TGGSAR
Trigger: CCTGGCTGAGCCTCCAGTGCAGTTCCTTGCTCTAGA...TGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTCGCAAGGTTAAGATaGGGCTTGAACCATTCTGGG +
Preference number: 4 (lower is better)
Translates to: YSKADLEICNGMQNPHGLLARLR*GLNHSG
Trigger: CCCAGAATGGTTCAAGCCGCATCTTAACCTTGCGAG...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp AAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAAGGTACATGCCTGAAGGATaGCCATGGCAAGTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: KADLEICNGMQNPHGLLRYMPEG*PWQVFL
Trigger: CAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTA...CCTTAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp AAGTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCAACATCTCTGCCAATATaGGGGGTCCTGGGGGACTGT +
Preference number: 4 (lower is better)
Translates to: KSFWRIFVFIAKPTWKYATSLPI*GVLGDC
Trigger: ACAGTCCCCCAGGACCCCCCATATTGGCAGAGATGT...TGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp AAGTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCATGCAGGATGAGTCTGTaGTGCAGACCCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: KSFWRIFVFIAKPTWKYACRMSL*CRPFCS
Trigger: AGAGCAGAAGGGTCTGCAGCACAGACTCATCCTGCA...TGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR GCA 90 bp GTTTATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGATACATGCCTGAAGGATaGCCATGGCAAGTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: VYSKADLEICNGMQNPHGYMPEG*PWQVFL
Trigger: CAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTA...TCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp GTTTATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGATTCAAGCAATCCTTCTaGCTCAGCCTCCCTAGTAAC +
Preference number: 4 (lower is better)
Translates to: VYSKADLEICNGMQNPHGFKQSF*LSLPSN
Trigger: GTTACTAGGGAGGCTGAGGCAGAAGGATTGCTTGAA...TCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTAGAAAAGTTTTGCTTTaGGCAAGCTGCTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: YSKADLEICNGMQNPHGLRKVLL*ASCCWD
Trigger: GTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCT...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp GTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCAATTCGGAAGTTATGGCATaGACGAACACATGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: VFLENICVYSKADLEICNSEVMA*TNTCSR
Trigger: CCGAGAACATGTGTTCGTGCATGCCATAACTTCCGA...ATTGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CCA 90 bp GTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCAATCCTGAAGGATGCCCATaGCAAGTCTTTCTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: VFLENICVYSKADLEICNPEGCP*QVFLEN
Trigger: ATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGG...ATTGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CCA 90 bp GTTTATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGATCCCTGCTACTTAAGTaGGTATGTGTATCCCTAGAA +
Preference number: 4 (lower is better)
Translates to: VYSKADLEICNGMQNPHGSLLLK*VCVSLE
Trigger: TTCTAGGGATACACATACCCACTTAAGTAGCAGGGA...TCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR GCA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTAAATATGCAATGGAATaGAAAATCCACATGGACTTC +
Preference number: 4 (lower is better)
Translates to: YSKADLEICNGMQNPHGLKYAME*KIHMDF
Trigger: GAAGTCCATGTGGATTTTGCATTCCATTGCATATTT...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS GCA 90 bp CACGTAGACGCCGGAATCCGGCAGCCGAGCCGCCAGGATGCGCAGTaGCAGGCTCGCGCCGGGGCCGTCCTCGGCGCGGCCCGGCCTCGG +
Preference number: 5 (lower is better)
Translates to: HVDAGIRQPSRQDAQ*QARAGAVLGAARPR
Trigger: CCGAGGCCGGGCCGCGCCGAGGACGGCCCCGGCGCGAGCCTGGCACTGCGCATCCTGGCGGCTCGGCTGCCGGATTCCGGCGTCTACGTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465589.1
CDS GCA 90 bp CACGTAGACGCCGGAATCCGGCAGCCGAGCCGCCAGGATGCGCAGTaGCAGGCTCGCGCCGGGGCCGTCCTCGGCGCGGCCCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: HVDAGIRQPSRQDAQ*QARAGAVLGAARLE
Trigger: CTCCAGCCGGGCCGCGCCGAGGACGGCCCCGGCGCGAGCCTGGCACTGCGCATCCTGGCGGCTCGGCTGCCGGATTCCGGCGTCTACGTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 90 bp CGTGGCACACGTAGACGCCGGAATCCGGCAGCCGAGCCGCCAGGATaGGCAGTGCCAGGCTCGCGCCGGGGCCGTCCTCGGCGCGGCCCG +
Preference number: 5 (lower is better)
Translates to: RGTRRRRNPAAEPPG*AVPGSRRGRPRRGP
Trigger: CGGGCCGCGCCGAGGACGGCCCCGGCGCGAGCCTGGCACTGCGCATCCTGGCGGCTCGGCTGCCGGATTCCGGCGTCTACGTGTGCCACG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000465589.1
ENST00000603926.5
CDS CCA 90 bp GGGCCGCAGCGTCGCAGCTGGAGAAGGCGGCGCGTGCCGAGGGCCTaGAGCCGGAGCCGCGGGCTAGGCGTAAGCGCGTTCCCGTCGCCT +
Preference number: 5 (lower is better)
Translates to: GPQRRSWRRRRVPRA*SRSRGLGVSAFPSP
Trigger: AGGCGACGGGAACGCGCTTACGCCTAGCCCGCGGCTCCGGCTCCAGGCCCTCGGCACGCGCCGCCTTCTCCAGCTGCGACGCTGCGGCCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465149.1
CDS GCA 90 bp TCCGCGCCGTCCGCCGGGAAGCTCAGGCGTTCCGAGGCCGCCAGCTaGTGCCCGCCCTTCTCCCACACCACTACAGGCGGCGGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: SAPSAGKLRRSEAAS*CPPFSHTTTGGGSP
Trigger: GGGGGAGCCGCCGCCTGTAGTGGTGTGGGAGAAGGGCGGGCAGCAGCTGGCGGCCTCGGAACGCCTGAGCTTCCCGGCGGACGGCGCGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000603926.5
CDS CCA 90 bp CGCAGTGCCAGGCTCGCGCCGGGGCCGTCCTCGGCGCGGCCCGGCTaGAGCGCGAAGTGGCTGCTGTCCCACACTTCGTCCAGGGCCATC +
Preference number: 5 (lower is better)
Translates to: RSARLAPGPSSARPG*SAKWLLSHTSSRAI
Trigger: GATGGCCCTGGACGAAGTGTGGGACAGCAGCCACTTCGCGCTCCAGCCGGGCCGCGCCGAGGACGGCCCCGGCGCGAGCCTGGCACTGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CCA 90 bp GGGCCGCAGCGTCGCAGCTGGAGAAGGCGGCGCGTGCCGAGGGCCTaGAGCCGGAGCCGCGGGCTAGGCGTAAGCGCGTTCCCGTCCTTC +
Preference number: 5 (lower is better)
Translates to: GPQRRSWRRRRVPRA*SRSRGLGVSAFPSF
Trigger: GAAGGACGGGAACGCGCTTACGCCTAGCCCGCGGCTCCGGCTCCAGGCCCTCGGCACGCGCCGCCTTCTCCAGCTGCGACGCTGCGGCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS GCA 90 bp ACTCGGCGGGGGCCCTCGGCATGGAGCTCTAGGCCCTCGCCCTCCTaGACGGGCCTCCCATTGTGGCTCCAGACCACGGGGGCGCCAGCC +
Preference number: 5 (lower is better)
Translates to: TRRGPSAWSSRPSPS*TGLPLWLQTTGAPA
Trigger: GGCTGGCGCCCCCGTGGTCTGGAGCCACAATGGGAGGCCCGTGCAGGAGGGCGAGGGCCTAGAGCTCCATGCCGAGGGCCCCCGCCGAGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000603926.5
ENST00000604031.5
CDS CCA 90 bp TCCGGGGGCTGCTCCAGACTGGCAGGTGTAGAGCCCTGCATGGGCTaGGCCTGCAGCCTGGATGCAGAGGACTCGGCGGGGGCCCTCGGC +
Preference number: 5 (lower is better)
Translates to: SGGCSRLAGVEPCMG*ACSLDAEDSAGALG
Trigger: GCCGAGGGCCCCCGCCGAGTCCTCTGCATCCAGGCTGCAGGCCCAGCCCATGCAGGGCTCTACACCTGCCAGTCTGGAGCAGCCCCCGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000603926.5
ENST00000604031.5
CDS CCA 90 bp TGCAGCTCTGCGGCGGCGGCGGCGGCGATTCCCGGGCCCGAAGCCTaGCGCTCAGGGGGCAGTCCTTCCTGTTTGCCTCTCCAGCGAGTG +
Preference number: 5 (lower is better)
Translates to: CSSAAAAAAIPGPEA*RSGGSPSCLPLQRV
Trigger: CACTCGCTGGAGAGGCAAACAGGAAGGACTGCCCCCTGAGCGCCAGGCTTCGGGCCCGGGAATCGCCGCCGCCGCCGCCGCAGAGCTGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404537.6
ENST00000491370.1
CDS TCA 90 bp TCTCCCACACCACTACAGGCGGCGGCTCCCCCAGGACCACGCACTTaGGCTCGGCCTCGGCGCCACTTACCACCCGCACAGGCCGCGGGA +
Preference number: 5 (lower is better)
Translates to: SPTPLQAAAPPGPRT*ARPRRHLPPAQAAG
Trigger: TCCCGCGGCCTGTGCGGGTGGTAAGTGGCGCCGAGGCCGAGCTCAAGTGCGTGGTCCTGGGGGAGCCGCCGCCTGTAGTGGTGTGGGAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000603926.5
CDS GCA 90 bp GCTTGGGGCTCCGGGGGCTGCTCCAGACTGGCAGGTGTAGAGCCCTaGATGGGCTGGGCCTGCAGCCTGGATGCAGAGGACTCGGCGGGG +
Preference number: 5 (lower is better)
Translates to: AWGSGGCSRLAGVEP*MGWACSLDAEDSAG
Trigger: CCCCGCCGAGTCCTCTGCATCCAGGCTGCAGGCCCAGCCCATGCAGGGCTCTACACCTGCCAGTCTGGAGCAGCCCCCGGAGCCCCAAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000603926.5
ENST00000604031.5
CDS GCA 90 bp CTGGCCCGGAGAGGTGCACCACCAGCTCTAGGTCCCCGCCTGGGGTaGTCCGAACCCTCGTCTGGGCTGCCTCGGGAGCTACCACCCGCA +
Preference number: 5 (lower is better)
Translates to: LARRGAPPALGPRLG*SEPSSGLPRELPPA
Trigger: TGCGGGTGGTAGCTCCCGAGGCAGCCCAGACGAGGGTTCGGAGCACCCCAGGCGGGGACCTAGAGCTGGTGGTGCACCTCTCCGGGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 90 bp CTCAGCCACCTGGACGGTGAAGCTGAGGCTTGGGGCTCCGGGGGCTaGTCCAGACTGGCAGGTGTAGAGCCCTGCATGGGCTGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: LSHLDGEAEAWGSGG*SRLAGVEPCMGWAC
Trigger: GCAGGCCCAGCCCATGCAGGGCTCTACACCTGCCAGTCTGGAGCAGCCCCCGGAGCCCCAAGCCTCAGCTTCACCGTCCAGGTGGCTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000603926.5
ENST00000604031.5
CDS GCA 90 bp CAGGGTCCGGGGAAGACAGCTCCGCAAGTCTCGCGCCCAAAGCAGTaGCCAGCCTCCACATCACCCCGTACCCACCGCGCACGGTCAGGC +
Preference number: 5 (lower is better)
Translates to: QGPGKTAPQVSRPKQ*PASTSPRTHRARSG
Trigger: GCCTGACCGTGCGCGGTGGGTACGGGGTGATGTGGAGGCTGGGCACTGCTTTGGGCGCGAGACTTGCGGAGCTGTCTTCCCCGGACCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465149.1
CDS CCA 90 bp AATGCCTCCACTTCCAGTAGAGCCAGGGACTGGGCGGGCCCCGCCTaGAAGCGGACTTCACCGGCGTCCTCGGCGCGCAGCTCGCTAAGC +
Preference number: 5 (lower is better)
Translates to: NASTSSRARDWAGPA*KRTSPASSARSSLS
Trigger: GCTTAGCGAGCTGCGCGCCGAGGACGCCGGTGAAGTCCGCTTCCAGGCGGGGCCCGCCCAGTCCCTGGCTCTACTGGAAGTGGAGGCATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000462534.5
ENST00000465149.1
ENST00000489804.5
CDS CCA 90 bp CACATCTGGAGAGGCAATGCCTCCACTTCCAGTAGAGCCAGGGACTaGGCGGGCCCCGCCTGGAAGCGGACTTCACCGGCGTCCTCGGCG +
Preference number: 5 (lower is better)
Translates to: HIWRGNASTSSRARD*AGPAWKRTSPASSA
Trigger: CGCCGAGGACGCCGGTGAAGTCCGCTTCCAGGCGGGGCCCGCCCAGTCCCTGGCTCTACTGGAAGTGGAGGCATTGCCTCTCCAGATGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000462534.5
ENST00000465149.1
ENST00000489804.5
CDS CCA 90 bp CTTCCTGCTCTTAGGAGCCTCTCTTCCCAGCCCCCTCCCACAGCTTaGGCCTCTTCCCCCTCCTCCCTCCCACCTCCAGCCGCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: LPALRSLSSQPPPTA*ASSPSSLPPPAARS
Trigger: GGACCTGGCGGCTGGAGGTGGGAGGGAGGAGGGGGAAGAGGCCCAAGCTGTGGGAGGGGGCTGGGAAGAGAGGCTCCTAAGAGCAGGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000491370.1
CDS TCA 90 bp CTGGAAGGACCAGGGCATGCATGTGGCCTGAGCTGCTCTGGCAGATaGCCGGCAGCTCCTCCCCATCACGGCTCCAGCGTCCCTCGACCC +
Preference number: 5 (lower is better)
Translates to: LEGPGHACGLSCSGR*PAAPPHHGSSVPRP
Trigger: GGGTCGAGGGACGCTGGAGCCGTGATGGGGAGGAGCTGCCGGTCATCTGCCAGAGCAGCTCAGGCCACATGCATGCCCTGGTCCTTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS TCA 90 bp CCACCTCCAGCCGCCAGGTCCCCAGCCGCCCGCCAGGCTTGGGCCTaGGTGGCAGAGGCGCCTGCAGCTGCCAATCCCAAAAATATTCTC +
Preference number: 5 (lower is better)
Translates to: PPPAARSPAARQAWA*VAEAPAAANPKNIL
Trigger: GAGAATATTTTTGGGATTGGCAGCTGCAGGCGCCTCTGCCACTCAGGCCCAAGCCTGGCGGGCGGCTGGGGACCTGGCGGCTGGAGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491370.1
CDS GCA 90 bp AGGATGTGCACCGGGCTCTCTTGGATTGTGAGGGCAGCTGAGTCCTaGACGCCGGGGCAGCTGAAGCCGACCAGGGCACCGCTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: RMCTGLSWIVRAAES*TPGQLKPTRAPLSW
Trigger: CCAGGACAGCGGTGCCCTGGTCGGCTTCAGCTGCCCCGGCGTGCAGGACTCAGCTGCCCTCACAATCCAAGAGAGCCCGGTGCACATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CCA 90 bp GTGACCCCTGGAAGGACCAGGGCATGCATGTGGCCTGAGCTGCTCTaGCAGATGACCGGCAGCTCCTCCCCATCACGGCTCCAGCGTCCC +
Preference number: 5 (lower is better)
Translates to: VTPGRTRACMWPELL*QMTGSSSPSRLQRP
Trigger: GGGACGCTGGAGCCGTGATGGGGAGGAGCTGCCGGTCATCTGCCAGAGCAGCTCAGGCCACATGCATGCCCTGGTCCTTCCAGGGGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CCA 90 bp ACCAGCAGTGGCTCTTCCACGCTGACAAGGAAGATGCGGCTGTCCTaGGGCGCATCGCACAGGTACTCCCCAGCGTCCCCGCTCCGTGCC +
Preference number: 5 (lower is better)
Translates to: TSSGSSTLTRKMRLS*GASHRYSPASPLRA
Trigger: GGCACGGAGCGGGGACGCTGGGGAGTACCTGTGCGATGCGCCCCAGGACAGCCGCATCTTCCTTGTCAGCGTGGAAGAGCCACTGCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS-3UTR CAA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCCCAGGACCACGCACTaGAGCTCGGCCTCGGCGCCA +
Preference number: 5 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPPRTTH*SSASAP
Trigger: TGGCGCCGAGGCCGAGCTCAAGTGCGTGGTCCTGGG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCATGGAGCCGGGCACTaGTGGCCGTGCTCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPHGAGH*WPCSLP
Trigger: GGGCAGGGAGCACGGCCACAAGTGCCCGGCTCCATG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp GGGCACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTCATGGAGCCGGGCACTaGTGGCCGTGCTCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: GHFGGGLRDSRTARKGCGHGAGH*WPCSLP
Trigger: GGGCAGGGAGCACGGCCACAAGTGCCCGGCTCCATG...ACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGCACCCGCCCCTGGCTaGCCAGTCGCTCCCCGTCCT +
Preference number: 5 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHAPAPG*PVAPRP
Trigger: AGGACGGGGAGCGACTGGCAAGCCAGGGGCGGGTGC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS GCA 90 bp ACCTCGCCAGCATCCTCTCGGGTGACCCCTGGAAGGACCAGGGCATaGATGTGGCCTGAGCTGCTCTGGCAGATGACCGGCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TSPASSRVTPGRTRA*MWPELLWQMTGSSS
Trigger: GGAGGAGCTGCCGGTCATCTGCCAGAGCAGCTCAGGCCACATGCATGCCCTGGTCCTTCCAGGGGTCACCCGAGAGGATGCTGGCGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 90 bp TTACATTCCAGCACGGCAATCCCGTGCTCACGGCCCTCCACGTCCTaGAGGGGCCGTGTGAACCGGAGGCGGGGCTCTTTCACGTGCAGC +
Preference number: 5 (lower is better)
Translates to: LHSSTAIPCSRPSTS*RGRVNRRRGSFTCS
Trigger: GCTGCACGTGAAAGAGCCCCGCCTCCGGTTCACACGGCCCCTGCAGGACGTGGAGGGCCGTGAGCACGGGATTGCCGTGCTGGAATGTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 90 bp CTCTGTCTCTCGAACATGGAGCCGGGCACTTGTGGCCGTGCTCCCTaGCCGCAAAGTCACGGTCCCTGCATCCCCCAGTTGGCAGCCTCG +
Preference number: 5 (lower is better)
Translates to: LCLSNMEPGTCGRAP*PQSHGPCIPQLAAS
Trigger: CGAGGCTGCCAACTGGGGGATGCAGGGACCGTGACTTTGCGGGCAGGGAGCACGGCCACAAGTGCCCGGCTCCATGTTCGAGAGACAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS GCA 90 bp CCCTGGTCGGCCAGTATGACACCATGGATGAAGAGGCGGTGGATGTaGCCATCCTGGGCCATGGACAGGCGAGAGTCGTGGGGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: PWSASMTPWMKRRWM*PSWAMDRRESWGRG
Trigger: GCCCCTGCCCCACGACTCTCGCCTGTCCATGGCCCAGGATGGGCACATCCACCGCCTCTTCATCCATGGTGTCATACTGGCCGACCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000603926.5
ENST00000604031.5
CDS CCA 90 bp TCCTGCACGCCGGGGCAGCTGAAGCCGACCAGGGCACCGCTGTCCTaGTGCTTGACGGCATGCAGGATGAGTCTGTGCTGCAGACCCTTC +
Preference number: 5 (lower is better)
Translates to: SCTPGQLKPTRAPLS*CLTACRMSLCCRPF
Trigger: GAAGGGTCTGCAGCACAGACTCATCCTGCATGCCGTCAAGCACCAGGACAGCGGTGCCCTGGTCGGCTTCAGCTGCCCCGGCGTGCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CCA 90 bp CAGTCGGTGACGGTGGCCGTCCGAGTGGATGTGACACTTGGGTCCTaGATACAGCTGTACTCCACCCCGGGCCCACTCCCCGGTCACACC +
Preference number: 5 (lower is better)
Translates to: QSVTVAVRVDVTLGS*IQLYSTPGPLPGHT
Trigger: GGTGTGACCGGGGAGTGGGCCCGGGGTGGAGTACAGCTGTATCCAGGACCCAAGTGTCACATCCACTCGGACGGCCACCGTCACCGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000596474.1
CDS CCA 90 bp ACCCATCAGCTCCCAGGCGCCCTCACCCTCCTGCCGCTGCCCAGTTaGCTTTACTCACCCTCTACCAGCAGCCGTGTGTGGGTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: THQLPGALTLLPLPS*LYSPSTSSRVWVLS
Trigger: GGACAGCACCCACACACGGCTGCTGGTAGAGGGTGAGTAAAGCCAACTGGGCAGCGGCAGGAGGGTGAGGGCGCCTGGGAGCTGATGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465149.1
CDS-3UTR CAA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTGCACGGGCCTCCCATaGTGGCTCCAGACCACGGGG +
Preference number: 5 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPCTGLP*WLQTTG
Trigger: CCCCGTGGTCTGGAGCCACAATGGGAGGCCCGTGCA...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTGACGACGGCCCCATaGCGCAGCCAGGTGACATCG +
Preference number: 5 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWVTTAP*RSQVTS
Trigger: CGATGTCACCTGGCTGCGCAATGGGGCCGTCGTCAC...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp CTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGGCACTTTGGTGCACCCGCCCCTGGCTaGCCAGTCGCTCCCCGTCCT +
Preference number: 5 (lower is better)
Translates to: LLLGRPWVTFLSDEGHFGAPAPG*PVAPRP
Trigger: AGGACGGGGAGCGACTGGCAAGCCAGGGGCGGGTGC...ACCAAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS TCA 90 bp TCTGGCTGCGCAGCGCAGGGAATCCGCTGTGAAGGAGACACAGCCTaGGTCGGCCAGGCCCAGGCCATTGAGTACCAGTCGGTGACGGTG +
Preference number: 5 (lower is better)
Translates to: SGCAAQGIRCEGDTA*VGQAQAIEYQSVTV
Trigger: CACCGTCACCGACTGGTACTCAATGGCCTGGGCCTGGCCGACTCAGGCTGTGTCTCCTTCACAGCGGATTCCCTGCGCTGCGCAGCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000596474.1
CDS GCA 90 bp GGGATGCGGGAGTTGGGTACTTTACATTCCAGCACGGCAATCCCGTaGTCACGGCCCTCCACGTCCTGCAGGGGCCGTGTGAACCGGAGG +
Preference number: 5 (lower is better)
Translates to: GMRELGTLHSSTAIP*SRPSTSCRGRVNRR
Trigger: CCTCCGGTTCACACGGCCCCTGCAGGACGTGGAGGGCCGTGAGCACGGGATTGCCGTGCTGGAATGTAAAGTACCCAACTCCCGCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 90 bp ACAGCAGCTCTGTCTCTCGAACATGGAGCCGGGCACTTGTGGCCGTaGTCCCTGCCCGCAAAGTCACGGTCCCTGCATCCCCCAGTTGGC +
Preference number: 5 (lower is better)
Translates to: TAALSLEHGAGHLWP*SLPAKSRSLHPPVG
Trigger: GCCAACTGGGGGATGCAGGGACCGTGACTTTGCGGGCAGGGAGCACGGCCACAAGTGCCCGGCTCCATGTTCGAGAGACAGAGCTGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS CCA 90 bp GCAGCCGCTGGTCCTCACGGAACCAGGCCGTGGGGATGCGGGAGTTaGGTACTTTACATTCCAGCACGGCAATCCCGTGCTCACGGCCCT +
Preference number: 5 (lower is better)
Translates to: AAAGPHGTRPWGCGS*VLYIPARQSRAHGP
Trigger: AGGGCCGTGAGCACGGGATTGCCGTGCTGGAATGTAAAGTACCCAACTCCCGCATCCCCACGGCCTGGTTCCGTGAGGACCAGCGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CCA 90 bp CCAGCATCCTCTCGGGTGACCCCTGGAAGGACCAGGGCATGCATGTaGCCTGAGCTGCTCTGGCAGATGACCGGCAGCTCCTCCCCATCA +
Preference number: 5 (lower is better)
Translates to: PASSRVTPGRTRACM*PELLWQMTGSSSPS
Trigger: TGATGGGGAGGAGCTGCCGGTCATCTGCCAGAGCAGCTCAGGCCACATGCATGCCCTGGTCCTTCCAGGGGTCACCCGAGAGGATGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CCA 90 bp CCCGCTGCACCCACTCGGCCTGTCTCCACTTCGAGACACACATCCTaGCCTTCCTCTGCCCGCACATCCTGCAACCGCCGTAGGAACAGC +
Preference number: 5 (lower is better)
Translates to: PAAPTRPVSTSRHTS*PSSARTSCNRRRNS
Trigger: GCTGTTCCTACGGCGGTTGCAGGATGTGCGGGCAGAGGAAGGCCAGGATGTGTGTCTCGAAGTGGAGACAGGCCGAGTGGGTGCAGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000603926.5
ENST00000604031.5
CDS CCA 90 bp CTCCAGCCGCCAGGTCCCCAGCCGCCCGCCAGGCTTGGGCCTGAGTaGCAGAGGCGCCTGCAGCTGCCAATCCCAAAAATATTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: LQPPGPQPPARLGPE*QRRLQLPIPKIFSD
Trigger: ATCAGAGAATATTTTTGGGATTGGCAGCTGCAGGCGCCTCTGCCACTCAGGCCCAAGCCTGGCGGGCGGCTGGGGACCTGGCGGCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491370.1
CDS-3UTR CAA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTCGATCTGCTCGTACTaGCGGCAGGGCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPSICSY*RQGSSR
Trigger: GCGGCTGCTGCCCTGCCGCAAGTACGAGCAGATCGA...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCCTTTGACTGTGACGTaGGCCACGGTGCGCACCCGG +
Preference number: 5 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPPLTVT*ATVRTR
Trigger: CCGGGTGCGCACCGTGGCCAACGTCACAGTCAAAGG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp AAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCACCCAGGACCACGCACTaGAGCTCGGCCTCGGCGCCA +
Preference number: 5 (lower is better)
Translates to: KQWQGGGTEECGPQTMGAPRTTH*SSASAP
Trigger: TGGCGCCGAGGCCGAGCTCAAGTGCGTGGTCCTGGG...TGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR CAA 90 bp CACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTACCCAGGACCACGCACTaGAGCTCGGCCTCGGCGCCA +
Preference number: 5 (lower is better)
Translates to: HFGGGLRDSRTARKGCGVPRTTH*SSASAP
Trigger: TGGCGCCGAGGCCGAGCTCAAGTGCGTGGTCCTGGG...TACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CAA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGTCTTAGGCGCGCACTaGAGCGGCTCCACCACCGGC +
Preference number: 5 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHVLGAH*SGSTTG
Trigger: GCCGGTGGTGGAGCCGCTCAAGTGCGCGCCTAAGAC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGTCTTAGGCGCGCACTaGAGCGGCTCCACCACCGGC +
Preference number: 5 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAVLGAH*SGSTTG
Trigger: GCCGGTGGTGGAGCCGCTCAAGTGCGCGCCTAAGAC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCATGCACGGGCCTCCCATaGTGGCTCCAGACCACGGGG +
Preference number: 5 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRACTGLP*WLQTTG
Trigger: CCCCGTGGTCTGGAGCCACAATGGGAGGCCCGTGCA...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp GCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGCATGGAGCCGGGCACTaGTGGCCGTGCTCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: ALGKLLLGRPWVTFLSDEHGAGH*WPCSLP
Trigger: GGGCAGGGAGCACGGCCACAAGTGCCCGGCTCCATG...CTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCAGTCGCTCCCCGTCCTaGTACCAGCGTACAGGGCCC +
Preference number: 5 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPSRSPS*YQRTGP
Trigger: GGGCCCTGTACGCTGGTACAAGGACGGGGAGCGACT...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS TCA 90 bp GAGCAGAACCGTGGAACACCACGTGGGGACTACGGCCATGTCCGCTaGCTGTGCAGATGCGGAAGCGGTAGTCACCCTCGGAGGGCACAC +
Preference number: 5 (lower is better)
Translates to: EQNRGTPRGDYGHVR*LCRCGSGSHPRRAH
Trigger: GTGTGCCCTCCGAGGGTGACTACCGCTTCCGCATCTGCACAGTCAGCGGACATGGCCGTAGTCCCCACGTGGTGTTCCACGGTTCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 90 bp TTCAGCCTGTGGATGATGAGGCGCCGGACAGTGCCCTCTTCGATCTaGTCGTACTTGCGGCAGGGCAGCAGCCGCTGGTCCTCACGGAAC +
Preference number: 5 (lower is better)
Translates to: FSLWMMRRRTVPSSI*SYLRQGSSRWSSRN
Trigger: GTTCCGTGAGGACCAGCGGCTGCTGCCCTGCCGCAAGTACGAGCAGATCGAAGAGGGCACTGTCCGGCGCCTCATCATCCACAGGCTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 90 bp GCGCACCCGGCCCCGCATCTCGCACAGGTAGATACCATCATCGTCTaGCTTCAGCCTGTGGATGATGAGGCGCCGGACAGTGCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: AHPAPHLAQVDTIIV*LQPVDDEAPDSALF
Trigger: GAAGAGGGCACTGTCCGGCGCCTCATCATCCACAGGCTGAAGGCAGACGATGATGGTATCTACCTGTGCGAGATGCGGGGCCGGGTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CCA 90 bp CACTTCCTGCCGCTCCAGCCGGTAGATGAATGGGGTCTCGGGAGCTaGCTCGGGAGGCTTCCAGGTCAACAGGACCGTGTTCTTGTGGCC +
Preference number: 5 (lower is better)
Translates to: HFLPLQPVDEWGLGS*LGRLPGQQDRVLVA
Trigger: GGCCACAAGAACACGGTCCTGTTGACCTGGAAGCCTCCCGAGCCAGCTCCCGAGACCCCATTCATCTACCGGCTGGAGCGGCAGGAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CCA 90 bp CCAGTCTTCAGAGCCCACTTCCTGCCGCTCCAGCCGGTAGATGAATaGGGTCTCGGGAGCTGGCTCGGGAGGCTTCCAGGTCAACAGGAC +
Preference number: 5 (lower is better)
Translates to: PVFRAHFLPLQPVDE*GLGSWLGRLPGQQD
Trigger: GTCCTGTTGACCTGGAAGCCTCCCGAGCCAGCTCCCGAGACCCCATTCATCTACCGGCTGGAGCGGCAGGAAGTGGGCTCTGAAGACTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CCA 90 bp AGTGACGACGGCCCCATTGCGCAGCCAGGTGACATCGGCATCTGGTaGGGAGACTTCACACCGGAACGTGGCATCATCGCCCTCGTGGAC +
Preference number: 5 (lower is better)
Translates to: SDDGPIAQPGDIGIW*GDFTPERGIIALVD
Trigger: GTCCACGAGGGCGATGATGCCACGTTCCGGTGTGAAGTCTCCCCACCAGATGCCGATGTCACCTGGCTGCGCAATGGGGCCGTCGTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS CCA 90 bp TGGAGTGACGACGGCCCCATTGCGCAGCCAGGTGACATCGGCATCTaGTGGGGAGACTTCACACCGGAACGTGGCATCATCGCCCTCGTG +
Preference number: 5 (lower is better)
Translates to: WSDDGPIAQPGDIGI*WGDFTPERGIIALV
Trigger: CACGAGGGCGATGATGCCACGTTCCGGTGTGAAGTCTCCCCACCAGATGCCGATGTCACCTGGCTGCGCAATGGGGCCGTCGTCACTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS CCA 90 bp GCCGTGCTCCCTGCCCGCAAAGTCACGGTCCCTGCATCCCCCAGTTaGCAGCCTCGCAAGGTTAAGATGCGGCTTGAACCATTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: AVLPARKVTVPASPS*QPRKVKMRLEPFWA
Trigger: GGCCCAGAATGGTTCAAGCCGCATCTTAACCTTGCGAGGCTGCCAACTGGGGGATGCAGGGACCGTGACTTTGCGGGCAGGGAGCACGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS CCA 90 bp GTAGGAACAGCAGCTCTGTCTCTCGAACATGGAGCCGGGCACTTGTaGCCGTGCTCCCTGCCCGCAAAGTCACGGTCCCTGCATCCCCCA +
Preference number: 5 (lower is better)
Translates to: VGTAALSLEHGAGHL*PCSLPAKSRSLHPP
Trigger: TGGGGGATGCAGGGACCGTGACTTTGCGGGCAGGGAGCACGGCCACAAGTGCCCGGCTCCATGTTCGAGAGACAGAGCTGCTGTTCCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp AGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGTCGATCTGCTCGTACTaGCGGCAGGGCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: SNGREVGQRNVGPKLWGQSICSY*RQGSSR
Trigger: GCGGCTGCTGCCCTGCCGCAAGTACGAGCAGATCGA...CTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTCGATCTGCTCGTACTaGCGGCAGGGCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHSICSY*RQGSSR
Trigger: GCGGCTGCTGCCCTGCCGCAAGTACGAGCAGATCGA...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTCCTTTGACTGTGACGTaGGCCACGGTGCGCACCCGG +
Preference number: 5 (lower is better)
Translates to: QWQGGGTEECGPQTMGAAPLTVT*ATVRTR
Trigger: CCGGGTGCGCACCGTGGCCAACGTCACAGTCAAAGG...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTTTGACTGTGACGTaGGCCACGGTGCGCACCCGG +
Preference number: 5 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHPLTVT*ATVRTR
Trigger: CCGGGTGCGCACCGTGGCCAACGTCACAGTCAAAGG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGTGACGACGGCCCCATaGCGCAGCCAGGTGACATCG +
Preference number: 5 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHVTTAP*RSQVTS
Trigger: CGATGTCACCTGGCTGCGCAATGGGGCCGTCGTCAC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAACATGGAGCCGGGCACTaGTGGCCGTGCTCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQHGAGH*WPCSLP
Trigger: GGGCAGGGAGCACGGCCACAAGTGCCCGGCTCCATG...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS GCA 90 bp TGGTGCTTGACGGCATGCAGGATGAGTCTGTGCTGCAGACCCTTCTaGTCTATACGGTACCGCAGGGCCCCAGGTTCCACCTGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: WCLTACRMSLCCRPF*SIRYRRAPGSTWPS
Trigger: GGAGGGCCAGGTGGAACCTGGGGCCCTGCGGTACCGTATAGAGCAGAAGGGTCTGCAGCACAGACTCATCCTGCATGCCGTCAAGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 90 bp GCACCGCTGTCCTGGTGCTTGACGGCATGCAGGATGAGTCTGTGCTaGAGACCCTTCTGCTCTATACGGTACCGCAGGGCCCCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: APLSWCLTACRMSLC*RPFCSIRYRRAPGS
Trigger: GGAACCTGGGGCCCTGCGGTACCGTATAGAGCAGAAGGGTCTGCAGCACAGACTCATCCTGCATGCCGTCAAGCACCAGGACAGCGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 90 bp AGGGCACCGCTGTCCTGGTGCTTGACGGCATGCAGGATGAGTCTGTaGTGCAGACCCTTCTGCTCTATACGGTACCGCAGGGCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: RAPLSWCLTACRMSL*CRPFCSIRYRRAPG
Trigger: ACCTGGGGCCCTGCGGTACCGTATAGAGCAGAAGGGTCTGCAGCACAGACTCATCCTGCATGCCGTCAAGCACCAGGACAGCGGTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 90 bp TGCACTGGAGGCTCAGCCAGGATGACATTGAAGGTGATGGCCTCATaGCGGGTCTCACACACATACTCCCCGGCGTCCTCAGGCTGGGCG +
Preference number: 5 (lower is better)
Translates to: CTGGSARMTLKVMAS*RVSHTYSPASSGWA
Trigger: CGCCCAGCCTGAGGACGCCGGGGAGTATGTGTGTGAGACCCGGCATGAGGCCATCACCTTCAATGTCATCCTGGCTGAGCCTCCAGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000603926.5
CDS GCA 90 bp TCACGGTCCCTGCATCCCCCAGTTGGCAGCCTCGCAAGGTTAAGATaGGGCTTGAACCATTCTGGGCCATCTCCACCTGGGGCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: SRSLHPPVGSLARLR*GLNHSGPSPPGALE
Trigger: CTCCAGGGCCCCAGGTGGAGATGGCCCAGAATGGTTCAAGCCGCATCTTAACCTTGCGAGGCTGCCAACTGGGGGATGCAGGGACCGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS GCA 90 bp TGCCCAGTTGGCTTTACTCACCCTCTACCAGCAGCCGTGTGTGGGTaGTGTCCTGGCCGGCCTGGCAGCAGTAAGTGCCTTGGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: CPVGFTHPLPAAVCG*CPGRPGSSKCLGPQ
Trigger: CTGAGGACCAAGGCACTTACTGCTGCCAGGCCGGCCAGGACAGCACCCACACACGGCTGCTGGTAGAGGGTGAGTAAAGCCAACTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465149.1
CDS GCA 90 bp GTCCCCAGCCGCCCGCCAGGCTTGGGCCTGAGTGGCAGAGGCGCCTaGAGCTGCCAATCCCAAAAATATTCTCTGATGACACAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: VPSRPPGLGLSGRGA*SCQSQKYSLMTQLE
Trigger: CTCCAGCTGTGTCATCAGAGAATATTTTTGGGATTGGCAGCTGCAGGCGCCTCTGCCACTCAGGCCCAAGCCTGGCGGGCGGCTGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491370.1
CDS CCA 90 bp AGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATaGGGGCAGCTGCTACTCAGTGCCAGCTGTTCGTCGCCATGGGGG +
Preference number: 5 (lower is better)
Translates to: SNGREVGQRNVGPKL*GQLLLSASCSSPWG
Trigger: CCCCCATGGCGACGAACAGCTGGCACTGAGTAGCAGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS CCA 90 bp CGCAAGGTTAAGATGCGGCTTGAACCATTCTGGGCCATCTCCACCTaGGGCCCTGGAGTGACGACGGCCCCATTGCGCAGCCAGGTGACA +
Preference number: 5 (lower is better)
Translates to: RKVKMRLEPFWAIST*GPGVTTAPLRSQVT
Trigger: TGTCACCTGGCTGCGCAATGGGGCCGTCGTCACTCCAGGGCCCCAGGTGGAGATGGCCCAGAATGGTTCAAGCCGCATCTTAACCTTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS CCA 90 bp CCCAGTTGGCAGCCTCGCAAGGTTAAGATGCGGCTTGAACCATTCTaGGCCATCTCCACCTGGGGCCCTGGAGTGACGACGGCCCCATTG +
Preference number: 5 (lower is better)
Translates to: PSWQPRKVKMRLEPF*AISTWGPGVTTAPL
Trigger: CAATGGGGCCGTCGTCACTCCAGGGCCCCAGGTGGAGATGGCCCAGAATGGTTCAAGCCGCATCTTAACCTTGCGAGGCTGCCAACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp TCAAATGCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGCCTTTGACTGTGACGTaGGCCACGGTGCGCACCCGG +
Preference number: 5 (lower is better)
Translates to: SNAHRGQVRLAAEAVWGEPLTVT*ATVRTR
Trigger: CCGGGTGCGCACCGTGGCCAACGTCACAGTCAAAGG...CTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGCATTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCCGCTGTCCTGGTGCTaGACGGCATGCAGGATGAGT +
Preference number: 5 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPPLSWC*TACRMS
Trigger: ACTCATCCTGCATGCCGTCAAGCACCAGGACAGCGG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAAACCTCCTCTCCATCCTaGGTCCAGCGCACCTCTGCC +
Preference number: 5 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKTSSPS*VQRTSA
Trigger: GGCAGAGGTGCGCTGGACCAAGGATGGAGAGGAGGT...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAACCTCCTCTCCATCCTaGGTCCAGCGCACCTCTGCC +
Preference number: 5 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRATSSPS*VQRTSA
Trigger: GGCAGAGGTGCGCTGGACCAAGGATGGAGAGGAGGT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACACCTCCTCTCCATCCTaGGTCCAGCGCACCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHTSSPS*VQRTSA
Trigger: GGCAGAGGTGCGCTGGACCAAGGATGGAGAGGAGGT...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS TCA 90 bp GAATCCAGTCTTCAGAGCCCACTTCCTGCCGCTCCAGCCGGTAGATaGATGGGGTCTCGGGAGCTGGCTCGGGAGGCTTCCAGGTCAACA +
Preference number: 5 (lower is better)
Translates to: ESSLQSPLPAAPAGR*MGSRELAREASRST
Trigger: TGTTGACCTGGAAGCCTCCCGAGCCAGCTCCCGAGACCCCATTCATCTACCGGCTGGAGCGGCAGGAAGTGGGCTCTGAAGACTGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS TCA 90 bp CCACCCTTGAGAGCTCACAAGTCAGCACCACCCGCTCTGAGGTTGTaGAGGTCAACGACACCCTGTCCTGGGGGCTCAGGATGTGCACCG +
Preference number: 5 (lower is better)
Translates to: PPLRAHKSAPPALRL*RSTTPCPGGSGCAP
Trigger: CGGTGCACATCCTGAGCCCCCAGGACAGGGTGTCGTTGACCTTCACAACCTCAGAGCGGGTGGTGCTGACTTGTGAGCTCTCAAGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS TCA 90 bp GGGAGACTTCACACCGGAACGTGGCATCATCGCCCTCGTGGACAGTaGGTGGTGTCAGCTCCGAGACCAGCTTCACCAGCAGTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: GRLHTGTWHHRPRGQ*VVSAPRPASPAVAQ
Trigger: CTGAGCCACTGCTGGTGAAGCTGGTCTCGGAGCTGACACCACTCACTGTCCACGAGGGCGATGATGCCACGTTCCGGTGTGAAGTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373876.5
ENST00000456147.1
ENST00000604031.5
CDS GCA 90 bp GTGGAGAGATCGAGGGAGAAGACGGCATCTTCCCCGTCGTATACCTaGACATCCTCCAGACCTGCCACCAGGCGAGCTGTGGGCACAAGG +
Preference number: 5 (lower is better)
Translates to: VERSREKTASSPSYT*TSSRPATRRAVGTR
Trigger: CCTTGTGCCCACAGCTCGCCTGGTGGCAGGTCTGGAGGATGTGCAGGTATACGACGGGGAAGATGCCGTCTTCTCCCTCGATCTCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 90 bp TGGTTAGGTTCTCCTAGTTGCCCTCTACCAGCAGCCGTGTGTGGGTaGTGTCCTGGCCGGCCTGGCAGCAGTAAGTGCCTTGGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: WLGSPSCPLPAAVCG*CPGRPGSSKCLGPQ
Trigger: CTGAGGACCAAGGCACTTACTGCTGCCAGGCCGGCCAGGACAGCACCCACACACGGCTGCTGGTAGAGGGCAACTAGGAGAACCTAACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000462534.5
CDS GCA 90 bp AAGCTGTCCAAGGGCACCCGCCTGGCCTGGTTAGGTTCTCCTAGTTaGCTGCAGAGGAATGACTCCACATGGGGCTGGGGAGAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: KLSKGTRLAWLGSPS*LQRNDSTWGWGEKG
Trigger: CCCCTTCTCTCCCCAGCCCCATGTGGAGTCATTCCTCTGCAGGCAACTAGGAGAACCTAACCAGGCCAGGCGGGTGCCCTTGGACAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465149.1
CDS GCA 90 bp AAGCTGTCCAAGGGCACCCGCCTGGCCTGGTTAGGTTCTCCTAGTTaGCTGCAGAGGAATGACTCCACATGGGGCCTCTACCAGCAGCCG +
Preference number: 5 (lower is better)
Translates to: KLSKGTRLAWLGSPS*LQRNDSTWGLYQQP
Trigger: CGGCTGCTGGTAGAGGCCCCATGTGGAGTCATTCCTCTGCAGGCAACTAGGAGAACCTAACCAGGCCAGGCGGGTGCCCTTGGACAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489804.5
CDS CCA 90 bp AGCACCACCCGCTCTGAGGTTGTGAAGGTCAACGACACCCTGTCCTaGGGGCTCAGGATGTGCACCGGGCTCTCTTGGATTGTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: STTRSEVVKVNDTLS*GLRMCTGLSWIVRA
Trigger: TGCCCTCACAATCCAAGAGAGCCCGGTGCACATCCTGAGCCCCCAGGACAGGGTGTCGTTGACCTTCACAACCTCAGAGCGGGTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CCA 90 bp GACTTCACACCGGAACGTGGCATCATCGCCCTCGTGGACAGTGAGTaGTGTCAGCTCCGAGACCAGCTTCACCAGCAGTGGCTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: DFTPERGIIALVDSE*CQLRDQLHQQWLSH
Trigger: GTGGCTGAGCCACTGCTGGTGAAGCTGGTCTCGGAGCTGACACCACTCACTGTCCACGAGGGCGATGATGCCACGTTCCGGTGTGAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373876.5
ENST00000456147.1
ENST00000604031.5
CDS-3UTR CAA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTTCAGGATGGGCCCTTaGACTGTGACGTTGGCCACG +
Preference number: 5 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPFRMGP*TVTLAT
Trigger: CGTGGCCAACGTCACAGTCAAAGGGCCCATCCTGAA...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCGTAGTGGTACGGGAGTaGCCCAGGCTAAAGGTGACC +
Preference number: 5 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPVVVRE*PRLKVT
Trigger: GGTCACCTTTAGCCTGGGCAACTCCCGTACCACTAC...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAACCGCTGTCCTGGTGCTaGACGGCATGCAGGATGAGT +
Preference number: 5 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKPLSWC*TACRMS
Trigger: ACTCATCCTGCATGCCGTCAAGCACCAGGACAGCGG...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp TCAAATGCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGACCTCCTCTCCATCCTaGGTCCAGCGCACCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SNAHRGQVRLAAEAVWGETSSPS*VQRTSA
Trigger: GGCAGAGGTGCGCTGGACCAAGGATGGAGAGGAGGT...CTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGCATTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGGAACTTGGCGTGCTaGCCCTCGTTCACCCAGAAG +
Preference number: 5 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRARNLAC*PSFTQK
Trigger: CTTCTGGGTGAACGAGGGCAAGCACGCCAAGTTCCG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS TCA 90 bp GGGAGACTTCACACCGGAACGTGGCATCATCGCCCTCGTGGACAGTaGGTGGTGTCAGCTCCGAGACCAGCTTCACCAGCAGTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: GRLHTGTWHHRPRGQ*VVSAPRPASPAVAL
Trigger: AAGAGCCACTGCTGGTGAAGCTGGTCTCGGAGCTGACACCACTCACTGTCCACGAGGGCGATGATGCCACGTTCCGGTGTGAAGTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS TCA 90 bp GCAAGAAGGGGCGTAGAAAGGTGGGAACAGCTGACCAGGAGCAGCTaGTCTGAGCCAAGCAGTTCCAGGGCTTTCCAGCCCTGGGTGTGC +
Preference number: 5 (lower is better)
Translates to: ARRGVERWEQLTRSS*SEPSSSRAFQPWVC
Trigger: GCACACCCAGGGCTGGAAAGCCCTGGAACTGCTTGGCTCAGATCAGCTGCTCCTGGTCAGCTGTTCCCACCTTTCTACGCCCCTTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465149.1
CDS TCA 90 bp GGGAGACTTCACACCGGAACGTGGCATCATCGCCCTCGTGGACAGTaGGTGGTGTCAGCTCCGAGACCAGCTTCACCAGCAGTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: GRLHTGTWHHRPRGQ*VVSAPRPASPAVAL
Trigger: TAGAGCCACTGCTGGTGAAGCTGGTCTCGGAGCTGACACCACTCACTGTCCACGAGGGCGATGATGCCACGTTCCGGTGTGAAGTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472388.1
CDS GCA 90 bp GAAGACGGCATCTTCCCCGTCGTATACCTGCACATCCTCCAGACCTaGCACCAGGCGAGCTGTGGGCACAAGGTGAGCAGAACCGTGGAA +
Preference number: 5 (lower is better)
Translates to: EDGIFPVVYLHILQT*HQASCGHKVSRTVE
Trigger: TTCCACGGTTCTGCTCACCTTGTGCCCACAGCTCGCCTGGTGGCAGGTCTGGAGGATGTGCAGGTATACGACGGGGAAGATGCCGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 90 bp CAGCTGAAGCCGACCAGGGCACCGCTGTCCTGGTGCTTGACGGCATaGAGGATGAGTCTGTGCTGCAGACCCTTCTGCTCTATACGGTAC +
Preference number: 5 (lower is better)
Translates to: QLKPTRAPLSWCLTA*RMSLCCRPFCSIRY
Trigger: GTACCGTATAGAGCAGAAGGGTCTGCAGCACAGACTCATCCTGCATGCCGTCAAGCACCAGGACAGCGGTGCCCTGGTCGGCTTCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 90 bp AGCCGCCCGCCAGGCTTGGGCCTGAGTGGCAGAGGCGCCTGCAGCTaGCAATCCCAAAAATATTCTCTGATGACACAGCTGGAGGACAAG +
Preference number: 5 (lower is better)
Translates to: SRPPGLGLSGRGACS*QSQKYSLMTQLEDK
Trigger: CTTGTCCTCCAGCTGTGTCATCAGAGAATATTTTTGGGATTGGCAGCTGCAGGCGCCTCTGCCACTCAGGCCCAAGCCTGGCGGGCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491370.1
CDS CCA 90 bp AAGGCCGAGACCCCTTCTGTCCTGCACTCAAACTCGCCACTGTCCTaGACTTTGGCCTCAGGCAGGATCAGACGGTGTTTGCGCCCATCC +
Preference number: 5 (lower is better)
Translates to: KAETPSVLHSNSPLS*TLASGRIRRCLRPS
Trigger: GGATGGGCGCAAACACCGTCTGATCCTGCCTGAGGCCAAAGTCCAGGACAGTGGCGAGTTTGAGTGCAGGACAGAAGGGGTCTCGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000462385.1
ENST00000465149.1
ENST00000603926.5
CDS CCA 90 bp TCTGGTGGGGAGACTTCACACCGGAACGTGGCATCATCGCCCTCGTaGACAGTGAGTGGTGTCAGCTCCGAGACCAGCTTCACCAGCAGT +
Preference number: 5 (lower is better)
Translates to: SGGETSHRNVASSPS*TVSGVSSETSFTSS
Trigger: ACTGCTGGTGAAGCTGGTCTCGGAGCTGACACCACTCACTGTCCACGAGGGCGATGATGCCACGTTCCGGTGTGAAGTCTCCCCACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS CCA 90 bp TCCCCACCTCCTACGTATCCCAGGACCCGTTGCCACCCCAAGTTCTaGAAAGCCTCCCATAGGTGTGGCTTAACCCATCAGCTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: SPPPTYPRTRCHPKF*KASHRCGLTHQLPG
Trigger: GCCTGGGAGCTGATGGGTTAAGCCACACCTATGGGAGGCTTTCCAGAACTTGGGGTGGCAACGGGTCCTGGGATACGTAGGAGGTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465149.1
CDS-3UTR CAA 90 bp CAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGTCGATCTGCTCGTACTaGCGGCAGGGCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: QKAMAGRWDRGMWAPNYGSICSY*RQGSSR
Trigger: GCGGCTGCTGCCCTGCCGCAAGTACGAGCAGATCGA...CCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTTTCAGGATGGGCCCTTaGACTGTGACGTTGGCCACG +
Preference number: 5 (lower is better)
Translates to: QWQGGGTEECGPQTMGAAFRMGP*TVTLAT
Trigger: CGTGGCCAACGTCACAGTCAAAGGGCCCATCCTGAA...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTGTAGTGGTACGGGAGTaGCCCAGGCTAAAGGTGACC +
Preference number: 5 (lower is better)
Translates to: QWQGGGTEECGPQTMGAAVVVRE*PRLKVT
Trigger: GGTCACCTTTAGCCTGGGCAACTCCCGTACCACTAC...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGTAGTGGTACGGGAGTaGCCCAGGCTAAAGGTGACC +
Preference number: 5 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHVVVRE*PRLKVT
Trigger: GGTCACCTTTAGCCTGGGCAACTCCCGTACCACTAC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp TCAAATGCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGCCGCTGTCCTGGTGCTaGACGGCATGCAGGATGAGT +
Preference number: 5 (lower is better)
Translates to: SNAHRGQVRLAAEAVWGEPLSWC*TACRMS
Trigger: ACTCATCCTGCATGCCGTCAAGCACCAGGACAGCGG...CTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGCATTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp GCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGCCGCTGTCCTGGTGCTaGACGGCATGCAGGATGAGT +
Preference number: 5 (lower is better)
Translates to: ALGKLLLGRPWVTFLSDEPLSWC*TACRMS
Trigger: ACTCATCCTGCATGCCGTCAAGCACCAGGACAGCGG...CTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CAA 90 bp AGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCATCCTTGTACCAGGTaGCCGGGAAGTCCACCCTTG +
Preference number: 5 (lower is better)
Translates to: SNGREVGQRNVGPKLWGQHPCTR*PGSPPL
Trigger: CAAGGGTGGACTTCCCGGCAACCTGGTACAAGGATG...CTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACATCCTTGTACCAGGTaGCCGGGAAGTCCACCCTTG +
Preference number: 5 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAHPCTR*PGSPPL
Trigger: CAAGGGTGGACTTCCCGGCAACCTGGTACAAGGATG...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCATCCTTGTACCAGGTaGCCGGGAAGTCCACCCTTG +
Preference number: 5 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHHPCTR*PGSPPL
Trigger: CAAGGGTGGACTTCCCGGCAACCTGGTACAAGGATG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp GGGCACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTAGGATCAGACGGTGTTaGCGCCCATCCATCTTCACC +
Preference number: 5 (lower is better)
Translates to: GHFGGGLRDSRTARKGCGRIRRC*RPSIFT
Trigger: GGTGAAGATGGATGGGCGCAAACACCGTCTGATCCT...ACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CAA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCACTGTCCTGGACTTaGGCCTCAGGCAGGATCAGA +
Preference number: 5 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHPLSWT*ASGRIR
Trigger: TCTGATCCTGCCTGAGGCCAAAGTCCAGGACAGTGG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGTGCACGGGAGGATCTaGGACAGTGACGCCGAAGAA +
Preference number: 5 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAVHGRI*DSDAEE
Trigger: TTCTTCGGCGTCACTGTCCAAGATCCTCCCGTGCAC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp AGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGGCTGCCACATACACCTaGCCGCTGGGATACACGATC +
Preference number: 5 (lower is better)
Translates to: SNGREVGQRNVGPKLWGQAATYT*PLGYTI
Trigger: GATCGTGTATCCCAGCGGCAAGGTGTATGTGGCAGC...CTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTGCTGCCACATACACCTaGCCGCTGGGATACACGATC +
Preference number: 5 (lower is better)
Translates to: QWQGGGTEECGPQTMGAAAATYT*PLGYTI
Trigger: GATCGTGTATCCCAGCGGCAAGGTGTATGTGGCAGC...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGCTGCCACATACACCTaGCCGCTGGGATACACGATC +
Preference number: 5 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAAATYT*PLGYTI
Trigger: GATCGTGTATCCCAGCGGCAAGGTGTATGTGGCAGC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGCTGCCACATACACCTaGCCGCTGGGATACACGATC +
Preference number: 5 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHAATYT*PLGYTI
Trigger: GATCGTGTATCCCAGCGGCAAGGTGTATGTGGCAGC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp AGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGTCTTAGGCGCGCACTaGAGCGGCTCCACCACCGGC +
Preference number: 5 (lower is better)
Translates to: RQKAMAGRWDRGMWAPNYVLGAH*SGSTTG
Trigger: GCCGGTGGTGGAGCCGCTCAAGTGCGCGCCTAAGAC...ATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR CAA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCCACACAGAGCGGGCTaGGAGTTGTCTCTAGAGCAA +
Preference number: 5 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPPHRAG*ELSLEQ
Trigger: TTGCTCTAGAGACAACTCCAAGCCCGCTCTGTGTGG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGCAGCAGTAAGTGCCTaGGTCCTCAGGTCGAACGTC +
Preference number: 5 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHAAVSA*VLRSNV
Trigger: GACGTTCGACCTGAGGACCAAGGCACTTACTGCTGC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTGGCAGTCCTTCCTGTTaGCCTCTCCAGCGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCGSPSC*PLQRVA
Trigger: GGCCACTCGCTGGAGAGGCAAACAGGAAGGACTGCC...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS TCA 90 bp ACCAACGCACAGGGGCGTCCTCTCGGTCCACCTCACAGGCCAGCATaGCACACTCGGAAGTTATGGCATGCACGAACACATGTTCTCGGG +
Preference number: 5 (lower is better)
Translates to: TNAQGRPLGPPHRPA*HTRKLWHARTHVLG
Trigger: CCCGAGAACATGTGTTCGTGCATGCCATAACTTCCGAGTGTGTCATGCTGGCCTGTGAGGTGGACCGAGAGGACGCCCCTGTGCGTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000462385.1
ENST00000465149.1
ENST00000603926.5
CDS TCA 90 bp AAGGGGCGTAGAAAGGTGGGAACAGCTGACCAGGAGCAGCTGATCTaGGCCAAGCAGTTCCAGGGCTTTCCAGCCCTGGGTGTGCTCTAC +
Preference number: 5 (lower is better)
Translates to: KGRRKVGTADQEQLI*AKQFQGFPALGVLY
Trigger: GTAGAGCACACCCAGGGCTGGAAAGCCCTGGAACTGCTTGGCTCAGATCAGCTGCTCCTGGTCAGCTGTTCCCACCTTTCTACGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465149.1
CDS GCA 90 bp TCCACTTCGAGACACACATCCTGGCCTTCCTCTGCCCGCACATCCTaGAACCGCCGTAGGAACAGCAGCTCTGTCTCTCGAACATGGAGC +
Preference number: 5 (lower is better)
Translates to: STSRHTSWPSSARTS*NRRRNSSSVSRTWS
Trigger: GCTCCATGTTCGAGAGACAGAGCTGCTGTTCCTACGGCGGTTGCAGGATGTGCGGGCAGAGGAAGGCCAGGATGTGTGTCTCGAAGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS CCA 90 bp AGACCCTTCTGCTCTATACGGTACCGCAGGGCCCCAGGTTCCACCTaGCCCTCCGGCTCGTTACTCTTGAGCTCTTCCCCATTAAGGAAC +
Preference number: 5 (lower is better)
Translates to: RPFCSIRYRRAPGST*PSGSLLLSSSPLRN
Trigger: GTTCCTTAATGGGGAAGAGCTCAAGAGTAACGAGCCGGAGGGCCAGGTGGAACCTGGGGCCCTGCGGTACCGTATAGAGCAGAAGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS-3UTR CAA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAAGTGGGGATGCGGGAGTaGGGTACTTTACATTCCAGC +
Preference number: 5 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKVGMRE*GTLHSS
Trigger: GCTGGAATGTAAAGTACCCAACTCCCGCATCCCCAC...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGTGGGGATGCGGGAGTaGGGTACTTTACATTCCAGC +
Preference number: 5 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAVGMRE*GTLHSS
Trigger: GCTGGAATGTAAAGTACCCAACTCCCGCATCCCCAC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp AAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGTAGTGGTACGGGAGTaGCCCAGGCTAAAGGTGACC +
Preference number: 5 (lower is better)
Translates to: KQWQGGGTEECGPQTMGAVVVRE*PRLKVT
Trigger: GGTCACCTTTAGCCTGGGCAACTCCCGTACCACTAC...TGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCCGCTGTCCTGGTGCTaGACGGCATGCAGGATGAGT +
Preference number: 5 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVPLSWC*TACRMS
Trigger: ACTCATCCTGCATGCCGTCAAGCACCAGGACAGCGG...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CAA 90 bp TCAAATGCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGCATCCTTGTACCAGGTaGCCGGGAAGTCCACCCTTG +
Preference number: 5 (lower is better)
Translates to: SNAHRGQVRLAAEAVWGEHPCTR*PGSPPL
Trigger: CAAGGGTGGACTTCCCGGCAACCTGGTACAAGGATG...CTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGCATTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACAGGATCAGACGGTGTTaGCGCCCATCCATCTTCACC +
Preference number: 5 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHRIRRC*RPSIFT
Trigger: GGTGAAGATGGATGGGCGCAAACACCGTCTGATCCT...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp AAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCACCACTGTCCTGGACTTaGGCCTCAGGCAGGATCAGA +
Preference number: 5 (lower is better)
Translates to: KQWQGGGTEECGPQTMGAPLSWT*ASGRIR
Trigger: TCTGATCCTGCCTGAGGCCAAAGTCCAGGACAGTGG...TGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCGGAACTTGGCGTGCTaGCCCTCGTTCACCCAGAAG +
Preference number: 5 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVRNLAC*PSFTQK
Trigger: CTTCTGGGTGAACGAGGGCAAGCACGCCAAGTTCCG...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CAA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCAGAGCGGGCTTGGAGTaGTCTCTAGAGCAAGGAACT +
Preference number: 5 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPRAGLE*SLEQGT
Trigger: AGTTCCTTGCTCTAGAGACAACTCCAAGCCCGCTCT...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp GGGCACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTAGAGCGGGCTTGGAGTaGTCTCTAGAGCAAGGAACT +
Preference number: 5 (lower is better)
Translates to: GHFGGGLRDSRTARKGCGRAGLE*SLEQGT
Trigger: AGTTCCTTGCTCTAGAGACAACTCCAAGCCCGCTCT...ACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCACACAGAGCGGGCTaGGAGTTGTCTCTAGAGCAA +
Preference number: 5 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHPHRAG*ELSLEQ
Trigger: TTGCTCTAGAGACAACTCCAAGCCCGCTCTGTGTGG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCATGGAGCCGGGCACTaGTGGCCGTGCTCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFHGAGH*WPCSLP
Trigger: GGGCAGGGAGCACGGCCACAAGTGCCCGGCTCCATG...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS CCA 90 bp CACGGGGTCAGCCTCGGCTGTAGAAACGCTCCACATTCTCTGGGTTaGGACAGGGACGGTATGAAGGGTGGAACTGATGAGAGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: HGVSLGCRNAPHSLG*DRDGMKGGTDERRV
Trigger: AACCCTCCTCTCATCAGTTCCACCCTTCATACCGTCCCTGTCCCAACCCAGAGAATGTGGAGCGTTTCTACAGCCGAGGCTGACCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462385.1
CDS CCA 90 bp CACACTCTGGCAGGGATGTCAATGAGGGCCACACTGAGACAGGCATaGTCAGTGGGGGTCACACGAGTTGGGGGTCAGTATTCATGCCTG +
Preference number: 5 (lower is better)
Translates to: HTLAGMSMRATLRQA*SVGVTRVGGQYSCL
Trigger: CAGGCATGAATACTGACCCCCAACTCGTGTGACCCCCACTGACCATGCCTGTCTCAGTGTGGCCCTCATTGACATCCCTGCCAGAGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000596474.1
CDS-3UTR CAA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCTTCAGGATGGGCCCTTaGACTGTGACGTTGGCCACG +
Preference number: 5 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVFRMGP*TVTLAT
Trigger: CGTGGCCAACGTCACAGTCAAAGGGCCCATCCTGAA...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CAA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCCCTGGGGGACTGTGCTaGACACATTTTACTCTGAGA +
Preference number: 5 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPPGGLC*THFTLR
Trigger: TCTCAGAGTAAAATGTGTCAAGCACAGTCCCCCAGG...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCAACAGGACCGTGTTCTaGTGGCCCTTGAACATCTCT +
Preference number: 5 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPNRTVF*WPLNIS
Trigger: AGAGATGTTCAAGGGCCACAAGAACACGGTCCTGTT...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCATCCGGCTCGTTACTCTaGAGCTCTTCCCCATTAAGG +
Preference number: 5 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRASGSLL*SSSPLR
Trigger: CCTTAATGGGGAAGAGCTCAAGAGTAACGAGCCGGA...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp AAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAAGGATCAGACGGTGTTaGCGCCCATCCATCTTCACC +
Preference number: 5 (lower is better)
Translates to: KQWQGGGTEECGPQTMGARIRRC*RPSIFT
Trigger: GGTGAAGATGGATGGGCGCAAACACCGTCTGATCCT...TGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp GAGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACCCACTGTCCTGGACTTaGGCCTCAGGCAGGATCAGA +
Preference number: 5 (lower is better)
Translates to: ERQKAMAGRWDRGMWAPNPLSWT*ASGRIR
Trigger: TCTGATCCTGCCTGAGGCCAAAGTCCAGGACAGTGG...GTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGTGCACGGGAGGATCTaGGACAGTGACGCCGAAGAA +
Preference number: 5 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQVHGRI*DSDAEE
Trigger: TTCTTCGGCGTCACTGTCCAAGATCCTCCCGTGCAC...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CAA 90 bp AGGTGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATGTCTTAGGCGCGCACTaGAGCGGCTCCACCACCGGC +
Preference number: 5 (lower is better)
Translates to: RCGVLFDSHPCYLSGYVYVLGAH*SGSTTG
Trigger: GCCGGTGGTGGAGCCGCTCAAGTGCGCGCCTAAGAC...ATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CAA 90 bp AAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGCGGAACTTGGCGTGCTaGCCCTCGTTCACCCAGAAG +
Preference number: 5 (lower is better)
Translates to: KKQWQGGGTEECGPQTMGRNLAC*PSFTQK
Trigger: CTTCTGGGTGAACGAGGGCAAGCACGCCAAGTTCCG...CCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373873.8
CDS-3UTR CAA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACTCAGCCAGGATGACATaGAAGGTGATGGCCTCATGC +
Preference number: 5 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHSARMT*KVMASC
Trigger: GCATGAGGCCATCACCTTCAATGTCATCCTGGCTGA...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp CTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGGGGCACTTTGGTCCACACAGAGCGGGCTaGGAGTTGTCTCTAGAGCAA +
Preference number: 5 (lower is better)
Translates to: LLLGRPWVTFLSDEGHFGPHRAG*ELSLEQ
Trigger: TTGCTCTAGAGACAACTCCAAGCCCGCTCTGTGTGG...ACCAAAGTGCCCCTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp GGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTAATCCACACAGAGCGGGCTaGGAGTTGTCTCTAGAGCAA +
Preference number: 5 (lower is better)
Translates to: GPEGLQDSQKRLWCRVGNPHRAG*ELSLEQ
Trigger: TTGCTCTAGAGACAACTCCAAGCCCGCTCTGTGTGG...ATTACCCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp GCCACTGCACCTGGTCTCAGCCCCATTTTTAAGGAGACTTGGCTCAAAGAGGTTGTGACGACGGCCCCATaGCGCAGCCAGGTGACATCG +
Preference number: 5 (lower is better)
Translates to: ATAPGLSPIFKETWLKEVVTTAP*RSQVTS
Trigger: CGATGTCACCTGGCTGCGCAATGGGGCCGTCGTCAC...AACCTCTTTGAGCCAAGTCTCCTTAAAAATGGGGCTGAGACCAGGTGCAGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp TCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCAACATCAGCCAAAGCTaGGGAAAGCTCGCACTCGAA +
Preference number: 5 (lower is better)
Translates to: STPAQGKGKRLPSCPRAPNISQS*GKLALE
Trigger: TTCGAGTGCGAGCTTTCCCAAGCTTTGGCTGATGTT...GGGTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCGCAGCAGTAAGTGCCTaGGTCCTCAGGTCGAACGTC +
Preference number: 5 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVAAVSA*VLRSNV
Trigger: GACGTTCGACCTGAGGACCAAGGCACTTACTGCTGC...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CAA 90 bp AGGTTAACTTGCATGAGGTCACATAGGAAACAGAGGGCTCCAGCTTTGGGTGGGAGTCGCTCCCCGTCCTaGTACCAGCGTACAGGGCCC +
Preference number: 5 (lower is better)
Translates to: RLTCMRSHRKQRAPALGGSRSPS*YQRTGP
Trigger: GGGCCCTGTACGCTGGTACAAGGACGGGGAGCGACT...CCCACCCAAAGCTGGAGCCCTCTGTTTCCTATGTGACCTCATGCAAGTTAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS CCA 90 bp AGACCCCTTCTGTCCTGCACTCAAACTCGCCACTGTCCTGGACTTTaGCCTCAGGCAGGATCAGACGGTGTTTGCGCCCATCCATCTTCA +
Preference number: 5 (lower is better)
Translates to: RPLLSCTQTRHCPGL*PQAGSDGVCAHPSS
Trigger: TGAAGATGGATGGGCGCAAACACCGTCTGATCCTGCCTGAGGCCAAAGTCCAGGACAGTGGCGAGTTTGAGTGCAGGACAGAAGGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000462385.1
ENST00000465149.1
ENST00000603926.5
CDS-3UTR CAA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTGTGGGGATGCGGGAGTaGGGTACTTTACATTCCAGC +
Preference number: 5 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCVGMRE*GTLHSS
Trigger: GCTGGAATGTAAAGTACCCAACTCCCGCATCCCCAC...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CAA 90 bp AGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTTTCAGGATGGGCCCTTaGACTGTGACGTTGGCCACG +
Preference number: 5 (lower is better)
Translates to: RGKKQWQGGGTEECGPQTFRMGP*TVTLAT
Trigger: CGTGGCCAACGTCACAGTCAAAGGGCCCATCCTGAA...AGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp TTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATTTCAGGATGGGCCCTTaGACTGTGACGTTGGCCACG +
Preference number: 5 (lower is better)
Translates to: FALGKLLLGRPWVTFLSDFRMGP*TVTLAT
Trigger: CGTGGCCAACGTCACAGTCAAAGGGCCCATCCTGAA...ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CAA 90 bp GCCCACAGGGGCCAGGTTAGGTTAGCGGCTGAAGCAGTCTGGGGAGAGGCAAAACCTGGGGGACTGTGCTaGACACATTTTACTCTGAGA +
Preference number: 5 (lower is better)
Translates to: AHRGQVRLAAEAVWGEAKPGGLC*THFTLR
Trigger: TCTCAGAGTAAAATGTGTCAAGCACAGTCCCCCAGG...TTTTGCCTCTCCCCAGACTGCTTCAGCCGCTAACCTAACCTGGCCCCTGTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACCCTGGGGGACTGTGCTaGACACATTTTACTCTGAGA +
Preference number: 5 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHPGGLC*THFTLR
Trigger: TCTCAGAGTAAAATGTGTCAAGCACAGTCCCCCAGG...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp CAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGCTAACAGGACCGTGTTCTaGTGGCCCTTGAACATCTCT +
Preference number: 5 (lower is better)
Translates to: QWQGGGTEECGPQTMGAANRTVF*WPLNIS
Trigger: AGAGATGTTCAAGGGCCACAAGAACACGGTCCTGTT...AGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAAACAGGACCGTGTTCTaGTGGCCCTTGAACATCTCT +
Preference number: 5 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRANRTVF*WPLNIS
Trigger: AGAGATGTTCAAGGGCCACAAGAACACGGTCCTGTT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp GTTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTAGGATCAGACGGTGTTaGCGCCCATCCATCTTCACC +
Preference number: 5 (lower is better)
Translates to: VPCLSTPAQGKGKRLPSCRIRRC*RPSIFT
Trigger: GGTGAAGATGGATGGGCGCAAACACCGTCTGATCCT...ACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CAA 90 bp AGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTGTGCACGGGAGGATCTaGGACAGTGACGCCGAAGAA +
Preference number: 5 (lower is better)
Translates to: RGKKQWQGGGTEECGPQTVHGRI*DSDAEE
Trigger: TTCTTCGGCGTCACTGTCCAAGATCCTCCCGTGCAC...AGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp GCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGTCAGCCAGGATGACATaGAAGGTGATGGCCTCATGC +
Preference number: 5 (lower is better)
Translates to: ALGKLLLGRPWVTFLSDESARMT*KVMASC
Trigger: GCATGAGGCCATCACCTTCAATGTCATCCTGGCTGA...CTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR CAA 90 bp GGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTAATAGAGCGGGCTTGGAGTaGTCTCTAGAGCAAGGAACT +
Preference number: 5 (lower is better)
Translates to: GPEGLQDSQKRLWCRVGNRAGLE*SLEQGT
Trigger: AGTTCCTTGCTCTAGAGACAACTCCAAGCCCGCTCT...ATTACCCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp GCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATGAGAGAGCGGGCTTGGAGTaGTCTCTAGAGCAAGGAACT +
Preference number: 5 (lower is better)
Translates to: ALGKLLLGRPWVTFLSDERAGLE*SLEQGT
Trigger: AGTTCCTTGCTCTAGAGACAACTCCAAGCCCGCTCT...CTCATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACAGGTTAAGATGCGGCTaGAACCATTCTGGGCCATCT +
Preference number: 5 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHRLRCG*NHSGPS
Trigger: AGATGGCCCAGAATGGTTCAAGCCGCATCTTAACCT...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAAGGTTAAGATGCGGCTaGAACCATTCTGGGCCATCT +
Preference number: 5 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRARLRCG*NHSGPS
Trigger: AGATGGCCCAGAATGGTTCAAGCCGCATCTTAACCT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAAACATCAGCCAAAGCTaGGGAAAGCTCGCACTCGAA +
Preference number: 5 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRANISQS*GKLALE
Trigger: TTCGAGTGCGAGCTTTCCCAAGCTTTGGCTGATGTT...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp TCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCACGTGTTCTTGTGGCCCTaGAACATCTCTGCCAATATG +
Preference number: 5 (lower is better)
Translates to: SLPLPRVRANAFQAVQGHVFLWP*NISANM
Trigger: CATATTGGCAGAGATGTTCAAGGGCCACAAGAACAC...GTGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp CTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAGGGCAGTGTTCTTGTGGCCCTaGAACATCTCTGCCAATATG +
Preference number: 5 (lower is better)
Translates to: LSTPAQGKGKRLPSCPRAVFLWP*NISANM
Trigger: CATATTGGCAGAGATGTTCAAGGGCCACAAGAACAC...TGCCCTTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS-3UTR CAA 90 bp GAGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTCCGGCTCGTTACTCTaGAGCTCTTCCCCATTAAGG +
Preference number: 5 (lower is better)
Translates to: ERQKAMAGRWDRGMWAPNSGSLL*SSSPLR
Trigger: CCTTAATGGGGAAGAGCTCAAGAGTAACGAGCCGGA...GTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp TTCCTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCTCAGCCAGGATGACATaGAAGGTGATGGCCTCATGC +
Preference number: 5 (lower is better)
Translates to: FLVSLPLPRVRANAFQAVSARMT*KVMASC
Trigger: GCATGAGGCCATCACCTTCAATGTCATCCTGGCTGA...GACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CAA 90 bp CTTGTCTCTCTACCCCTGCCCAGGGTAAGGGCAAACGCCTTCCAAGCTGTCCAAAGAGCGGGCTTGGAGTaGTCTCTAGAGCAAGGAACT +
Preference number: 5 (lower is better)
Translates to: LVSLPLPRVRANAFQAVQRAGLE*SLEQGT
Trigger: AGTTCCTTGCTCTAGAGACAACTCCAAGCCCGCTCT...TTGGACAGCTTGGAAGGCGTTTGCCCTTACCCTGGGCAGGGGTAGAGAGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS-3UTR CAA 90 bp TTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTCTCAGCGATCCACACAGAGCGGGCTaGGAGTTGTCTCTAGAGCAA +
Preference number: 5 (lower is better)
Translates to: FALGKLLLGRPWVTFLSDPHRAG*ELSLEQ
Trigger: TTGCTCTAGAGACAACTCCAAGCCCGCTCTGTGTGG...ATCGCTGAGAAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp GGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGGTAATAGGTTAAGATGCGGCTaGAACCATTCTGGGCCATCT +
Preference number: 5 (lower is better)
Translates to: GPEGLQDSQKRLWCRVGNRLRCG*NHSGPS
Trigger: AGATGGCCCAGAATGGTTCAAGCCGCATCTTAACCT...ATTACCCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp GGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAGGGTGGAGAAAAAGAAAAGTTTaGCTTTGGGCAAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GGGLRDSRTARKGCGVGWRKRKV*LWASCC
Trigger: GCAGCAGCTTGCCCAAAGCAAAACTTTTCTTTTTCT...CCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp AGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGTGGGGATGCGGGAGTaGGGTACTTTACATTCCAGC +
Preference number: 5 (lower is better)
Translates to: RQKAMAGRWDRGMWAPNYVGMRE*GTLHSS
Trigger: GCTGGAATGTAAAGTACCCAACTCCCGCATCCCCAC...ATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp TGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATCCCGTAGTGGTACGGGAGTaGCCCAGGCTAAAGGTGACC +
Preference number: 5 (lower is better)
Translates to: CGVLFDSHPCYLSGYVYPVVVRE*PRLKVT
Trigger: GGTCACCTTTAGCCTGGGCAACTCCCGTACCACTAC...GGGATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CAA 90 bp AAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGCAGTGTTCTTGTGGCCCTaGAACATCTCTGCCAATATG +
Preference number: 5 (lower is better)
Translates to: KQWQGGGTEECGPQTMGAVFLWP*NISANM
Trigger: CATATTGGCAGAGATGTTCAAGGGCCACAAGAACAC...TGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp AGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATAGGATCAGACGGTGTTaGCGCCCATCCATCTTCACC +
Preference number: 5 (lower is better)
Translates to: RQKAMAGRWDRGMWAPNYRIRRC*RPSIFT
Trigger: GGTGAAGATGGATGGGCGCAAACACCGTCTGATCCT...ATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp AGGTGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATCGGAACTTGGCGTGCTaGCCCTCGTTCACCCAGAAG +
Preference number: 5 (lower is better)
Translates to: RCGVLFDSHPCYLSGYVYRNLAC*PSFTQK
Trigger: CTTCTGGGTGAACGAGGGCAAGCACGCCAAGTTCCG...ATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CAA 90 bp CACTTTGGTGGGGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTGGTGTAAAGAAAAGTTTTGCTTaGGGCAAGCTGCTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: HFGGGLRDSRTARKGCGVKKSFA*GKLLLG
Trigger: TCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT...TACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCCCCACCAAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp AGGTTAACTTGCATGAGGTCACATAGGAAACAGAGGGCTCCAGCTTTGGGTGGGGGTGTGGGGTGCTGTTaGACAGCCATCCCTGCTACT +
Preference number: 5 (lower is better)
Translates to: RLTCMRSHRKQRAPALGGGVGCC*TAIPAT
Trigger: AGTAGCAGGGATGGCTGTCAAACAGCACCCCACACC...CCCACCCAAAGCTGGAGCCCTCTGTTTCCTATGTGACCTCATGCAAGTTAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS TCA 90 bp CTCAGGATGCAGGCCCTCGTCCCCAGTCATTTAACAGACCTTCTGTaGGGACCTACTATGTATCGACCACACCGATGGCCCAAAGGACAA +
Preference number: 5 (lower is better)
Translates to: LRMQALVPSHLTDLL*GPTMYRPHRWPKGQ
Trigger: TTGTCCTTTGGGCCATCGGTGTGGTCGATACATAGTAGGTCCTCACAGAAGGTCTGTTAAATGACTGGGGACGAGGGCCTGCATCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472388.1
CDS-3UTR CAA 90 bp AGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTCCTGGGGGACTGTGCTaGACACATTTTACTCTGAGA +
Preference number: 5 (lower is better)
Translates to: RGKKQWQGGGTEECGPQTPGGLC*THFTLR
Trigger: TCTCAGAGTAAAATGTGTCAAGCACAGTCCCCCAGG...AGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp AGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTAACAGGACCGTGTTCTaGTGGCCCTTGAACATCTCT +
Preference number: 5 (lower is better)
Translates to: RGKKQWQGGGTEECGPQTNRTVF*WPLNIS
Trigger: AGAGATGTTCAAGGGCCACAAGAACACGGTCCTGTT...AGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp AGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATTCCGGCTCGTTACTCTaGAGCTCTTCCCCATTAAGG +
Preference number: 5 (lower is better)
Translates to: RQKAMAGRWDRGMWAPNYSGSLL*SSSPLR
Trigger: CCTTAATGGGGAAGAGCTCAAGAGTAACGAGCCGGA...ATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp AGGTGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATGCTGCCACATACACCTaGCCGCTGGGATACACGATC +
Preference number: 5 (lower is better)
Translates to: RCGVLFDSHPCYLSGYVYAATYT*PLGYTI
Trigger: GATCGTGTATCCCAGCGGCAAGGTGTATGTGGCAGC...ATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CAA 90 bp AAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATGGGGGTGTTCTTGTGGCCCTaGAACATCTCTGCCAATATG +
Preference number: 5 (lower is better)
Translates to: KKQWQGGGTEECGPQTMGVFLWP*NISANM
Trigger: CATATTGGCAGAGATGTTCAAGGGCCACAAGAACAC...CCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp AGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTATGCACGGGCCTCCCATaGTGGCTCCAGACCACGGGG +
Preference number: 5 (lower is better)
Translates to: SKADLEICNGMQNPHGLLCTGLP*WLQTTG
Trigger: CCCCGTGGTCTGGAGCCACAATGGGAGGCCCGTGCA...TAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp AAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAAGGTGCACGGGCCTCCCATaGTGGCTCCAGACCACGGGG +
Preference number: 5 (lower is better)
Translates to: KADLEICNGMQNPHGLLRCTGLP*WLQTTG
Trigger: CCCCGTGGTCTGGAGCCACAATGGGAGGCCCGTGCA...CCTTAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp GAGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACACTCCGGATTGTTATTaGAACTGTCCTGACTTTGGT +
Preference number: 5 (lower is better)
Translates to: ERQKAMAGRWDRGMWAPNTPDCY*NCPDFG
Trigger: ACCAAAGTCAGGACAGTTCAAATAACAATCCGGAGT...GTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp AGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAGTGACGACGGCCCCATaGCGCAGCCAGGTGACATCG +
Preference number: 5 (lower is better)
Translates to: SKADLEICNGMQNPHGLLVTTAP*RSQVTS
Trigger: CGATGTCACCTGGCTGCGCAATGGGGCCGTCGTCAC...TAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp TGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATCCCAGGTTAAGATGCGGCTaGAACCATTCTGGGCCATCT +
Preference number: 5 (lower is better)
Translates to: CGVLFDSHPCYLSGYVYPRLRCG*NHSGPS
Trigger: AGATGGCCCAGAATGGTTCAAGCCGCATCTTAACCT...GGGATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS GCA 90 bp AGGACCTACTATGTATCGACCACACCGATGGCCCAAAGGACAAGATaGCAGCTCCCTGCCACTCCTTTTAGTCAGTTCCTCATAATCCTA +
Preference number: 5 (lower is better)
Translates to: RTYYVSTTPMAQRTR*QLPATPFSQFLIIL
Trigger: TAGGATTATGAGGAACTGACTAAAAGGAGTGGCAGGGAGCTGGCATCTTGTCCTTTGGGCCATCGGTGTGGTCGATACATAGTAGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472388.1
CDS-3UTR CAA 90 bp TATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCCTTTGACTGTGACGTaGGCCACGGTGCGCACCCGG +
Preference number: 5 (lower is better)
Translates to: YSKADLEICNGMQNPHGLPLTVT*ATVRTR
Trigger: CCGGGTGCGCACCGTGGCCAACGTCACAGTCAAAGG...AAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CAA 90 bp AGAGGCAAAAAGCAATGGCAGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTACTCCGGATTGTTATTaGAACTGTCCTGACTTTGGT +
Preference number: 5 (lower is better)
Translates to: RGKKQWQGGGTEECGPQTTPDCY*NCPDFG
Trigger: ACCAAAGTCAGGACAGTTCAAATAACAATCCGGAGT...AGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCTGCCATTGCTTTTTGCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS-3UTR CAA 90 bp CCACTGCACCTGGTCTCAGCCCCATTTTTAAGGAGACTTGGCTCAAAGAGGTTAGTGTTCTTGTGGCCCTaGAACATCTCTGCCAATATG +
Preference number: 5 (lower is better)
Translates to: PLHLVSAPFLRRLGSKRLVFLWP*NISANM
Trigger: CATATTGGCAGAGATGTTCAAGGGCCACAAGAACAC...TAACCTCTTTGAGCCAAGTCTCCTTAAAAATGGGGCTGAGACCAGGTGCAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CAA 90 bp AAGAAAAGTTTTGCTTTGGGCAAGCTGCTGCTGGGACGGCCATGGGTGACTTTTAAGAAAAGTTTTGCTTaGGGCAAGCTGCTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: KKSFALGKLLLGRPWVTFKKSFA*GKLLLG
Trigger: TCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT...AAAAGTCACCCATGGCCGTCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp AGGTGTGGGGTGCTGTTTGACAGCCATCCCTGCTACTTAAGTGGGTATGTGTATAAGAAAAGTTTTGCTTaGGGCAAGCTGCTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: RCGVLFDSHPCYLSGYVYKKSFA*GKLLLG
Trigger: TCCCAGCAGCAGCTTGCCCAAAGCAAAACTTTTCTT...ATACACATACCCACTTAAGTAGCAGGGATGGCTGTCAAACAGCACCCCACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp CAAATGACAACCATTCACCAAGCTCTGTGTAAGAATTTTCATGTTATCTCAGTTTCGATCTGCTCGTACTaGCGGCAGGGCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: QMTTIHQALCKNFHVISVSICSY*RQGSSR
Trigger: GCGGCTGCTGCCCTGCCGCAAGTACGAGCAGATCGA...AACTGAGATAACATGAAAATTCTTACACAGAGCTTGGTGAATGGTTGTCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CAA 90 bp AAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTAAGGGTGCACGGGAGGATCTaGGACAGTGACGCCGAAGAA +
Preference number: 5 (lower is better)
Translates to: KADLEICNGMQNPHGLLRVHGRI*DSDAEE
Trigger: TTCTTCGGCGTCACTGTCCAAGATCCTCCCGTGCAC...CCTTAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CAA 90 bp CAAATGACAACCATTCACCAAGCTCTGTGTAAGAATTTTCATGTTATCTCAGTTACCTCCTCTCCATCCTaGGTCCAGCGCACCTCTGCC +
Preference number: 5 (lower is better)
Translates to: QMTTIHQALCKNFHVISVTSSPS*VQRTSA
Trigger: GGCAGAGGTGCGCTGGACCAAGGATGGAGAGGAGGT...AACTGAGATAACATGAAAATTCTTACACAGAGCTTGGTGAATGGTTGTCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CAA 90 bp AGGTTAACTTGCATGAGGTCACATAGGAAACAGAGGGCTCCAGCTTTGGGTGGGTATAGCAAAGCCGACTaGGAAATATGCAATGGAATG +
Preference number: 5 (lower is better)
Translates to: RLTCMRSHRKQRAPALGGYSKAD*EICNGM
Trigger: CATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA...CCCACCCAAAGCTGGAGCCCTCTGTTTCCTATGTGACCTCATGCAAGTTAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp GTTTATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGAGGTGTGGGGTGCTGTTaGACAGCCATCCCTGCTACT +
Preference number: 5 (lower is better)
Translates to: VYSKADLEICNGMQNPHGGVGCC*TAIPAT
Trigger: AGTAGCAGGGATGGCTGTCAAACAGCACCCCACACC...TCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp AGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGACTTCTATCAGCCAGGATGACATaGAAGGTGATGGCCTCATGC +
Preference number: 5 (lower is better)
Translates to: SKADLEICNGMQNPHGLLSARMT*KVMASC
Trigger: GCATGAGGCCATCACCTTCAATGTCATCCTGGCTGA...TAGAAGTCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456147.1
ENST00000603926.5
CDS-3UTR CAA 90 bp GTTAGAAGAGATGTGTCACAAATGACAACCATTCACCAAGCTCTGTGTAAGAATTCCGGCTCGTTACTCTaGAGCTCTTCCCCATTAAGG +
Preference number: 5 (lower is better)
Translates to: VRRDVSQMTTIHQALCKNSGSLL*SSSPLR
Trigger: CCTTAATGGGGAAGAGCTCAAGAGTAACGAGCCGGA...ATTCTTACACAGAGCTTGGTGAATGGTTGTCATTTGTGACACATCTCTTCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CAA 90 bp AAGTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCACATCCTTGTACCAGGTaGCCGGGAAGTCCACCCTTG +
Preference number: 5 (lower is better)
Translates to: KSFWRIFVFIAKPTWKYAHPCTR*PGSPPL
Trigger: CAAGGGTGGACTTCCCGGCAACCTGGTACAAGGATG...TGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CAA 90 bp CAAATGACAACCATTCACCAAGCTCTGTGTAAGAATTTTCATGTTATCTCAGTTCCACTGTCCTGGACTTaGGCCTCAGGCAGGATCAGA +
Preference number: 5 (lower is better)
Translates to: QMTTIHQALCKNFHVISVPLSWT*ASGRIR
Trigger: TCTGATCCTGCCTGAGGCCAAAGTCCAGGACAGTGG...AACTGAGATAACATGAAAATTCTTACACAGAGCTTGGTGAATGGTTGTCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CAA 90 bp AAGTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCAGTGGGGATGCGGGAGTaGGGTACTTTACATTCCAGC +
Preference number: 5 (lower is better)
Translates to: KSFWRIFVFIAKPTWKYAVGMRE*GTLHSS
Trigger: GCTGGAATGTAAAGTACCCAACTCCCGCATCCCCAC...TGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CAA 90 bp GTTTATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGAAGGTTAAGATGCGGCTaGAACCATTCTGGGCCATCT +
Preference number: 5 (lower is better)
Translates to: VYSKADLEICNGMQNPHGRLRCG*NHSGPS
Trigger: AGATGGCCCAGAATGGTTCAAGCCGCATCTTAACCT...TCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp CAAATGACAACCATTCACCAAGCTCTGTGTAAGAATTTTCATGTTATCTCAGTTCCTGGGGGACTGTGCTaGACACATTTTACTCTGAGA +
Preference number: 5 (lower is better)
Translates to: QMTTIHQALCKNFHVISVPGGLC*THFTLR
Trigger: TCTCAGAGTAAAATGTGTCAAGCACAGTCCCCCAGG...AACTGAGATAACATGAAAATTCTTACACAGAGCTTGGTGAATGGTTGTCATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CAA 90 bp AAGTCTTTCTGGAGAATATTTGTGTTTATAGCAAAGCCGACTTGGAAATATGCAAACAGGACCGTGTTCTaGTGGCCCTTGAACATCTCT +
Preference number: 5 (lower is better)
Translates to: KSFWRIFVFIAKPTWKYANRTVF*WPLNIS
Trigger: AGAGATGTTCAAGGGCCACAAGAACACGGTCCTGTT...TGCATATTTCCAAGTCGGCTTTGCTATAAACACAAATATTCTCCAGAAAGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603926.5
CDS-3UTR CAA 90 bp TACATGCCTGAAGGATGCCCATGGCAAGTCTTTCTGGAGAATATTTGTGTTTATAGAAAAAGAAAAGTTTaGCTTTGGGCAAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: YMPEGCPWQVFLENICVYRKRKV*LWASCC
Trigger: GCAGCAGCTTGCCCAAAGCAAAACTTTTCTTTTTCT...ATAAACACAAATATTCTCCAGAAAGACTTGCCATGGGCATCCTTCAGGCATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603926.5
ENST00000604031.5
CDS-3UTR CAA 90 bp GTTTATAGCAAAGCCGACTTGGAAATATGCAATGGAATGCAAAATCCACATGGATATAGCAAAGCCGACTaGGAAATATGCAATGGAATG +
Preference number: 5 (lower is better)
Translates to: VYSKADLEICNGMQNPHGYSKAD*EICNGM
Trigger: CATTCCATTGCATATTTCCAAGTCGGCTTTGCTATA...TCCATGTGGATTTTGCATTCCATTGCATATTTCCAAGTCGGCTTTGCTATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS GCA 72 bp CGTGTGAACCGGAGGCGGGGCTCCTCGGCCCCGAGCTaGAGCTCTGCGGCGGCGGCGGCGGCGATTCCCGGG +
Preference number: 6 (lower is better)
Translates to: RVNRRRGSSAPS*SSAAAAAAIPG
Trigger: CCCGGGAATCGCCGCCGCCGCCGCCGCAGAGCTGCAGCTCGGGGCCGAGGAGCCCCGCCTCCGGTTCACACG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289656.3
CDS GCA 72 bp CGCTCCCGGCTCGCCTCCTTACCCTCGGCCCCGAGCTaGAGCTCTGCGGCGGCGGCGGCGGCGATTCCCGGG +
Preference number: 6 (lower is better)
Translates to: RSRLASLPSAPS*SSAAAAAAIPG
Trigger: CCCGGGAATCGCCGCCGCCGCCGCCGCAGAGCTGCAGCTCGGGGCCGAGGGTAAGGAGGCGAGCCGGGAGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404537.6
CDS GCA 72 bp GGCGCGGCACACGTAGACCCCCGCGTCGGTGGGCAGTaGGGCGGTCAGCAGCAGGCCGTGCTCCGCGCCGTC +
Preference number: 6 (lower is better)
Translates to: GAAHVDPRVGGQ*GGQQQAVLRAV
Trigger: GACGGCGCGGAGCACGGCCTGCTGCTGACCGCCGCACTGCCCACCGACGCGGGGGTCTACGTGTGCCGCGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000603926.5
CDS GCA 72 bp GCGTCGGTGGGCAGTGCGGCGGTCAGCAGCAGGCCGTaGTCCGCGCCGTCCGCCGGGAAGCTCAGGCGTTCC +
Preference number: 6 (lower is better)
Translates to: ASVGSAAVSSRP*SAPSAGKLRRS
Trigger: GGAACGCCTGAGCTTCCCGGCGGACGGCGCGGAGCACGGCCTGCTGCTGACCGCCGCACTGCCCACCGACGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000603926.5
CDS GCA 72 bp CGTAGACGCCGGAATCCGGCAGCCGAGCCGCCAGGATaGGCAGTGCCAGGCTCGCGCCGGGGCCGTCCTCGG +
Preference number: 6 (lower is better)
Translates to: RRRRNPAAEPPG*AVPGSRRGRPR
Trigger: CCGAGGACGGCCCCGGCGCGAGCCTGGCACTGCGCATCCTGGCGGCTCGGCTGCCGGATTCCGGCGTCTACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000465589.1
ENST00000603926.5
CDS CCA 72 bp AGGCTCGCGCCGGGGCCGTCCTCGGCGCGGCCCGGCTaGAGCGCGAAGTGGCTGCTGTCCCACACTTCGTCC +
Preference number: 6 (lower is better)
Translates to: RLAPGPSSARPG*SAKWLLSHTSS
Trigger: GGACGAAGTGTGGGACAGCAGCCACTTCGCGCTCCAGCCGGGCCGCGCCGAGGACGGCCCCGGCGCGAGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 72 bp CGGCGGCGGTCCGGGAGCAGCGGGCGGCCCTCCCAGTaGCATTCGATCTCGGGCTCGGGCTTGCCCATCACG +
Preference number: 6 (lower is better)
Translates to: RRRSGSSGRPSQ*HSISGSGLPIT
Trigger: CGTGATGGGCAAGCCCGAGCCCGAGATCGAATGGCACTGGGAGGGCCGCCCGCTGCTCCCGGACCGCCGCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000465589.1
ENST00000603926.5
CDS CCA 72 bp CGTCGCAGCTGGAGAAGGCGGCGCGTGCCGAGGGCCTaGAGCCGGAGCCGCGGGCTAGGCGTAAGCGCGTTC +
Preference number: 6 (lower is better)
Translates to: RRSWRRRRVPRA*SRSRGLGVSAF
Trigger: GAACGCGCTTACGCCTAGCCCGCGGCTCCGGCTCCAGGCCCTCGGCACGCGCCGCCTTCTCCAGCTGCGACG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
CDS CCA 72 bp GCGGCGGCGGCGGCGGCGATTCCCGGGCCCGAAGCCTaGCGCTCAGGGGGCAGTCCTTCCTGTTTGCCTCTC +
Preference number: 6 (lower is better)
Translates to: AAAAAAIPGPEA*RSGGSPSCLPL
Trigger: GAGAGGCAAACAGGAAGGACTGCCCCCTGAGCGCCAGGCTTCGGGCCCGGGAATCGCCGCCGCCGCCGCCGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404537.6
ENST00000465589.1
ENST00000491370.1
CDS CCA 72 bp GCCTGGATGCAGAGGACTCGGCGGGGGCCCTCGGCATaGAGCTCTAGGCCCTCGCCCTCCTGCACGGGCCTC +
Preference number: 6 (lower is better)
Translates to: AWMQRTRRGPSA*SSRPSPSCTGL
Trigger: GAGGCCCGTGCAGGAGGGCGAGGGCCTAGAGCTCCATGCCGAGGGCCCCCGCCGAGTCCTCTGCATCCAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000603926.5
ENST00000604031.5
CDS CAA 72 bp AGCTCTAGGCCCTCGCCCTCCTGCACGGGCCTCCCATaGTGGCTCCAGACCACGGGGGCGCCAGCCCGGGAC +
Preference number: 6 (lower is better)
Translates to: SSRPSPSCTGLP*WLQTTGAPARD
Trigger: GTCCCGGGCTGGCGCCCCCGTGGTCTGGAGCCACAATGGGAGGCCCGTGCAGGAGGGCGAGGGCCTAGAGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000603926.5
ENST00000604031.5
CDS TCA 72 bp GGAGGCGGGGCTCTTTCACGTGCAGCTGCACGGCACTaGGCGTCTGGCCCGCCGAGTTGCGCGCGGCGCAGA +
Preference number: 6 (lower is better)
Translates to: GGGALSRAAARH*ASGPPSCARRR
Trigger: TCTGCGCCGCGCGCAACTCGGCGGGCCAGACGCTCAGTGCCGTGCAGCTGCACGTGAAAGAGCCCCGCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 72 bp AGCACGGCAATCCCGTGCTCACGGCCCTCCACGTCCTaGAGGGGCCGTGTGAACCGGAGGCGGGGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: STAIPCSRPSTS*RGRVNRRRGSS
Trigger: CGAGGAGCCCCGCCTCCGGTTCACACGGCCCCTGCAGGACGTGGAGGGCCGTGAGCACGGGATTGCCGTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289656.3
CDS GCA 72 bp CGTCCTCGGCGCGGCCCGGCTGGAGCGCGAAGTGGCTaGTGTCCCACACTTCGTCCAGGGCCATCCCGTCCT +
Preference number: 6 (lower is better)
Translates to: RPRRGPAGARSG*CPTLRPGPSRP
Trigger: AGGACGGGATGGCCCTGGACGAAGTGTGGGACAGCAGCCACTTCGCGCTCCAGCCGGGCCGCGCCGAGGACG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000603926.5
CDS GCA 72 bp GGGCCCTCGGCATGGAGCTCTAGGCCCTCGCCCTCCTaGACGGGCCTCCCATTGTGGCTCCAGACCACGGGG +
Preference number: 6 (lower is better)
Translates to: GPSAWSSRPSPS*TGLPLWLQTTG
Trigger: CCCCGTGGTCTGGAGCCACAATGGGAGGCCCGTGCAGGAGGGCGAGGGCCTAGAGCTCCATGCCGAGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000603926.5
ENST00000604031.5
CDS CCA 72 bp TCTAGGCCCTCGCCCTCCTGCACGGGCCTCCCATTGTaGCTCCAGACCACGGGGGCGCCAGCCCGGGACAGT +
Preference number: 6 (lower is better)
Translates to: SRPSPSCTGLPL*LQTTGAPARDS
Trigger: ACTGTCCCGGGCTGGCGCCCCCGTGGTCTGGAGCCACAATGGGAGGCCCGTGCAGGAGGGCGAGGGCCTAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000603926.5
ENST00000604031.5
CDS CCA 72 bp ACTTCCAGTAGAGCCAGGGACTGGGCGGGCCCCGCCTaGAAGCGGACTTCACCGGCGTCCTCGGCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: TSSRARDWAGPA*KRTSPASSARS
Trigger: GCTGCGCGCCGAGGACGCCGGTGAAGTCCGCTTCCAGGCGGGGCCCGCCCAGTCCCTGGCTCTACTGGAAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000462534.5
ENST00000465149.1
ENST00000489804.5
CDS CAA 90 bp TTCTCCCACACCACTACAGGCGGCGGCTCCCCCAGGACCACGCACTaGAGCTCGGCCTCGGCGCCACTTACCACCCGCACAGGCCGCGGG +
Preference number: 6 (lower is better)
Translates to: FSHTTTGGGSPRTTH*SSASAPLTTRTGRG
Trigger: CCCGCGGCCTGTGCGGGTGGTAAGTGGCGCCGAGGCCGAGCTCAAGTGCGTGGTCCTGGGGGAGCCGCCGCCTGTAGTGGTGTGGGAGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000603926.5
CDS CAA 90 bp TTGGCGTGCTTGCCCTCGTTCACCCAGAAGGTCTTAGGCGCGCACTaGAGCGGCTCCACCACCGGCGCGGGGGCCTCGTCGGGGTCCGCG +
Preference number: 6 (lower is better)
Translates to: LACLPSFTQKVLGAH*SGSTTGAGASSGSA
Trigger: CGCGGACCCCGACGAGGCCCCCGCGCCGGTGGTGGAGCCGCTCAAGTGCGCGCCTAAGACCTTCTGGGTGAACGAGGGCAAGCACGCCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000465589.1
ENST00000603926.5
CDS TCA 72 bp CCACTACAGGCGGCGGCTCCCCCAGGACCACGCACTTaGGCTCGGCCTCGGCGCCACTTACCACCCGCACAG +
Preference number: 6 (lower is better)
Translates to: PLQAAAPPGPRT*ARPRRHLPPAQ
Trigger: CTGTGCGGGTGGTAAGTGGCGCCGAGGCCGAGCTCAAGTGCGTGGTCCTGGGGGAGCCGCCGCCTGTAGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000603926.5
CDS GCA 72 bp AGGGTCAGGGTGCGGGTGGGCCCCTCGGCACCCAGCTaGAGGGCATCTGATGCCTCCACTTCCAGCCCGTCC +
Preference number: 6 (lower is better)
Translates to: RVRVRVGPSAPS*RASDASTSSPS
Trigger: GGACGGGCTGGAAGTGGAGGCATCAGATGCCCTGCAGCTGGGTGCCGAGGGGCCCACCCGCACCCTGACCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000603926.5
CDS TCA 72 bp CGTGCTCACGGCCCTCCACGTCCTGCAGGGGCCGTGTaGACCGGAGGCGGGGCTCTTTCACGTGCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: RAHGPPRPAGAV*TGGGALSRAAA
Trigger: TGCAGCTGCACGTGAAAGAGCCCCGCCTCCGGTTCACACGGCCCCTGCAGGACGTGGAGGGCCGTGAGCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 72 bp CGTGTGAACCGGAGGCGGGGCTCTTTCACGTGCAGCTaGACGGCACTGAGCGTCTGGCCCGCCGAGTTGCGC +
Preference number: 6 (lower is better)
Translates to: RVNRRRGSFTCS*TALSVWPAELR
Trigger: GCGCAACTCGGCGGGCCAGACGCTCAGTGCCGTGCAGCTGCACGTGAAAGAGCCCCGCCTCCGGTTCACACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 72 bp AGCACGGCAATCCCGTGCTCACGGCCCTCCACGTCCTaGAGGGGCCGTGTGAACCGGAGGCGGGGCTCTTTC +
Preference number: 6 (lower is better)
Translates to: STAIPCSRPSTS*RGRVNRRRGSF
Trigger: GAAAGAGCCCCGCCTCCGGTTCACACGGCCCCTGCAGGACGTGGAGGGCCGTGAGCACGGGATTGCCGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CCA 72 bp GGGCAGCTGCTACTCAGTGCCAGCTGTTCGTCGCCATaGGGGGAAGCGGGACCAGAGCCGCCGGGTCTTCGG +
Preference number: 6 (lower is better)
Translates to: GQLLLSASCSSP*GEAGPEPPGLR
Trigger: CCGAAGACCCGGCGGCTCTGGTCCCGCTTCCCCCCATGGCGACGAACAGCTGGCACTGAGTAGCAGCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS CAA 72 bp GGCAGGCGCTTCAGGATGGGCCCTTTGACTGTGACGTaGGCCACGGTGCGCACCCGGCCCCGCATCTCGCAC +
Preference number: 6 (lower is better)
Translates to: GRRFRMGPLTVT*ATVRTRPRISH
Trigger: GTGCGAGATGCGGGGCCGGGTGCGCACCGTGGCCAACGTCACAGTCAAAGGGCCCATCCTGAAGCGCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CAA 72 bp ACCACTACAGGCGGCGGCTCCCCCAGGACCACGCACTaGAGCTCGGCCTCGGCGCCACTTACCACCCGCACA +
Preference number: 6 (lower is better)
Translates to: TTTGGGSPRTTH*SSASAPLTTRT
Trigger: TGTGCGGGTGGTAAGTGGCGCCGAGGCCGAGCTCAAGTGCGTGGTCCTGGGGGAGCCGCCGCCTGTAGTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000603926.5
CDS GCA 72 bp ACCGGGCTCTCTTGGATTGTGAGGGCAGCTGAGTCCTaGACGCCGGGGCAGCTGAAGCCGACCAGGGCACCG +
Preference number: 6 (lower is better)
Translates to: TGLSWIVRAAES*TPGQLKPTRAP
Trigger: CGGTGCCCTGGTCGGCTTCAGCTGCCCCGGCGTGCAGGACTCAGCTGCCCTCACAATCCAAGAGAGCCCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 72 bp TCCGGGGGCTGCTCCAGACTGGCAGGTGTAGAGCCCTaGATGGGCTGGGCCTGCAGCCTGGATGCAGAGGAC +
Preference number: 6 (lower is better)
Translates to: SGGCSRLAGVEP*MGWACSLDAED
Trigger: GTCCTCTGCATCCAGGCTGCAGGCCCAGCCCATGCAGGGCTCTACACCTGCCAGTCTGGAGCAGCCCCCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000603926.5
ENST00000604031.5
CDS GCA 72 bp CTGGACGGTGAAGCTGAGGCTTGGGGCTCCGGGGGCTaGTCCAGACTGGCAGGTGTAGAGCCCTGCATGGGC +
Preference number: 6 (lower is better)
Translates to: LDGEAEAWGSGG*SRLAGVEPCMG
Trigger: GCCCATGCAGGGCTCTACACCTGCCAGTCTGGAGCAGCCCCCGGAGCCCCAAGCCTCAGCTTCACCGTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000603926.5
ENST00000604031.5
CDS GCA 72 bp AGAGGTGCACCACCAGCTCTAGGTCCCCGCCTGGGGTaGTCCGAACCCTCGTCTGGGCTGCCTCGGGAGCTA +
Preference number: 6 (lower is better)
Translates to: RGAPPALGPRLG*SEPSSGLPREL
Trigger: TAGCTCCCGAGGCAGCCCAGACGAGGGTTCGGAGCACCCCAGGCGGGGACCTAGAGCTGGTGGTGCACCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CCA 72 bp AGAGGCAATGCCTCCACTTCCAGTAGAGCCAGGGACTaGGCGGGCCCCGCCTGGAAGCGGACTTCACCGGCG +
Preference number: 6 (lower is better)
Translates to: RGNASTSSRARD*AGPAWKRTSPA
Trigger: CGCCGGTGAAGTCCGCTTCCAGGCGGGGCCCGCCCAGTCCCTGGCTCTACTGGAAGTGGAGGCATTGCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000462534.5
ENST00000465149.1
ENST00000489804.5
CDS TCA 72 bp CCAGGGCATGCATGTGGCCTGAGCTGCTCTGGCAGATaGCCGGCAGCTCCTCCCCATCACGGCTCCAGCGTC +
Preference number: 6 (lower is better)
Translates to: PGHACGLSCSGR*PAAPPHHGSSV
Trigger: GACGCTGGAGCCGTGATGGGGAGGAGCTGCCGGTCATCTGCCAGAGCAGCTCAGGCCACATGCATGCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CCA 72 bp CCGGGGCAGCTGAAGCCGACCAGGGCACCGCTGTCCTaGTGCTTGACGGCATGCAGGATGAGTCTGTGCTGC +
Preference number: 6 (lower is better)
Translates to: PGQLKPTRAPLS*CLTACRMSLCC
Trigger: GCAGCACAGACTCATCCTGCATGCCGTCAAGCACCAGGACAGCGGTGCCCTGGTCGGCTTCAGCTGCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CCA 72 bp GGCTCTTCCACGCTGACAAGGAAGATGCGGCTGTCCTaGGGCGCATCGCACAGGTACTCCCCAGCGTCCCCG +
Preference number: 6 (lower is better)
Translates to: GSSTLTRKMRLS*GASHRYSPASP
Trigger: CGGGGACGCTGGGGAGTACCTGTGCGATGCGCCCCAGGACAGCCGCATCTTCCTTGTCAGCGTGGAAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CCA 72 bp CCAGGTCCCCAGCCGCCCGCCAGGCTTGGGCCTGAGTaGCAGAGGCGCCTGCAGCTGCCAATCCCAAAAATA +
Preference number: 6 (lower is better)
Translates to: PGPQPPARLGPE*QRRLQLPIPKI
Trigger: TATTTTTGGGATTGGCAGCTGCAGGCGCCTCTGCCACTCAGGCCCAAGCCTGGCGGGCGGCTGGGGACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491370.1
CDS CAA 72 bp AGGCGCCGGACAGTGCCCTCTTCGATCTGCTCGTACTaGCGGCAGGGCAGCAGCCGCTGGTCCTCACGGAAC +
Preference number: 6 (lower is better)
Translates to: RRRTVPSSICSY*RQGSSRWSSRN
Trigger: GTTCCGTGAGGACCAGCGGCTGCTGCCCTGCCGCAAGTACGAGCAGATCGAAGAGGGCACTGTCCGGCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS TCA 72 bp CTTCAGAGCCCACTTCCTGCCGCTCCAGCCGGTAGATaGATGGGGTCTCGGGAGCTGGCTCGGGAGGCTTCC +
Preference number: 6 (lower is better)
Translates to: LQSPLPAAPAGR*MGSRELAREAS
Trigger: GGAAGCCTCCCGAGCCAGCTCCCGAGACCCCATTCATCTACCGGCTGGAGCGGCAGGAAGTGGGCTCTGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS TCA 72 bp GATGTGCACCGGGCTCTCTTGGATTGTGAGGGCAGCTaGGTCCTGCACGCCGGGGCAGCTGAAGCCGACCAG +
Preference number: 6 (lower is better)
Translates to: DVHRALLDCEGS*VLHAGAAEADQ
Trigger: CTGGTCGGCTTCAGCTGCCCCGGCGTGCAGGACTCAGCTGCCCTCACAATCCAAGAGAGCCCGGTGCACATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS TCA 72 bp AGGAGACACAGCCTGAGTCGGCCAGGCCCAGGCCATTaGGTACCAGTCGGTGACGGTGGCCGTCCGAGTGGA +
Preference number: 6 (lower is better)
Translates to: RRHSLSRPGPGH*VPVGDGGRPSG
Trigger: TCCACTCGGACGGCCACCGTCACCGACTGGTACTCAATGGCCTGGGCCTGGCCGACTCAGGCTGTGTCTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000596474.1
CDS TCA 72 bp TGCATTAAGAGAGGACGGGGCACTCACGCCTCACGCTaGGCCTGGCCAGGGTGCGATCGTGGTGGCTCTCGC +
Preference number: 6 (lower is better)
Translates to: CIKRGRGTHASR*AWPGCDRGGSR
Trigger: GCGAGAGCCACCACGATCGCACCCTGGCCAGGCTCAGCGTGAGGCGTGAGTGCCCCGTCCTCTCTTAATGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS GCA 72 bp TGGATGATGAGGCGCCGGACAGTGCCCTCTTCGATCTaGTCGTACTTGCGGCAGGGCAGCAGCCGCTGGTCC +
Preference number: 6 (lower is better)
Translates to: WMMRRRTVPSSI*SYLRQGSSRWS
Trigger: GGACCAGCGGCTGCTGCCCTGCCGCAAGTACGAGCAGATCGAAGAGGGCACTGTCCGGCGCCTCATCATCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 72 bp TCGAACATGGAGCCGGGCACTTGTGGCCGTGCTCCCTaGCCGCAAAGTCACGGTCCCTGCATCCCCCAGTTG +
Preference number: 6 (lower is better)
Translates to: SNMEPGTCGRAP*PQSHGPCIPQL
Trigger: CAACTGGGGGATGCAGGGACCGTGACTTTGCGGGCAGGGAGCACGGCCACAAGTGCCCGGCTCCATGTTCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS GCA 72 bp CTGTCTCTCGAACATGGAGCCGGGCACTTGTGGCCGTaGTCCCTGCCCGCAAAGTCACGGTCCCTGCATCCC +
Preference number: 6 (lower is better)
Translates to: LSLEHGAGHLWP*SLPAKSRSLHP
Trigger: GGGATGCAGGGACCGTGACTTTGCGGGCAGGGAGCACGGCCACAAGTGCCCGGCTCCATGTTCGAGAGACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS GCA 72 bp CTCCACATGGGGCCTCTACCAGCAGCCGTGTGTGGGTaGTGTCCTGGCCGGCCTGGCAGCAGTAAGTGCCTT +
Preference number: 6 (lower is better)
Translates to: LHMGPLPAAVCG*CPGRPGSSKCL
Trigger: AAGGCACTTACTGCTGCCAGGCCGGCCAGGACAGCACCCACACACGGCTGCTGGTAGAGGCCCCATGTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489804.5
CDS CCA 72 bp TCTCGGGTGACCCCTGGAAGGACCAGGGCATGCATGTaGCCTGAGCTGCTCTGGCAGATGACCGGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SRVTPGRTRACM*PELLWQMTGSS
Trigger: GGAGCTGCCGGTCATCTGCCAGAGCAGCTCAGGCCACATGCATGCCCTGGTCCTTCCAGGGGTCACCCGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CCA 72 bp AGAGCCCACTTCCTGCCGCTCCAGCCGGTAGATGAATaGGGTCTCGGGAGCTGGCTCGGGAGGCTTCCAGGT +
Preference number: 6 (lower is better)
Translates to: RAHFLPLQPVDE*GLGSWLGRLPG
Trigger: ACCTGGAAGCCTCCCGAGCCAGCTCCCGAGACCCCATTCATCTACCGGCTGGAGCGGCAGGAAGTGGGCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CCA 72 bp GCAGCTCTGTCTCTCGAACATGGAGCCGGGCACTTGTaGCCGTGCTCCCTGCCCGCAAAGTCACGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: AALSLEHGAGHL*PCSLPAKSRSL
Trigger: CAGGGACCGTGACTTTGCGGGCAGGGAGCACGGCCACAAGTGCCCGGCTCCATGTTCGAGAGACAGAGCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS CCA 72 bp ACGGTGGCCGTCCGAGTGGATGTGACACTTGGGTCCTaGATACAGCTGTACTCCACCCCGGGCCCACTCCCC +
Preference number: 6 (lower is better)
Translates to: TVAVRVDVTLGS*IQLYSTPGPLP
Trigger: GGGGAGTGGGCCCGGGGTGGAGTACAGCTGTATCCAGGACCCAAGTGTCACATCCACTCGGACGGCCACCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000596474.1
CDS CAA 90 bp AGCAGCCGCTGGTCCTCACGGAACCAGGCCGTGGGGATGCGGGAGTaGGGTACTTTACATTCCAGCACGGCAATCCCGTGCTCACGGCCC +
Preference number: 6 (lower is better)
Translates to: SSRWSSRNQAVGMRE*GTLHSSTAIPCSRP
Trigger: GGGCCGTGAGCACGGGATTGCCGTGCTGGAATGTAAAGTACCCAACTCCCGCATCCCCACGGCCTGGTTCCGTGAGGACCAGCGGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CAA 90 bp ACGCCGGGGCAGCTGAAGCCGACCAGGGCACCGCTGTCCTGGTGCTaGACGGCATGCAGGATGAGTCTGTGCTGCAGACCCTTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: TPGQLKPTRAPLSWC*TACRMSLCCRPFCS
Trigger: AGAGCAGAAGGGTCTGCAGCACAGACTCATCCTGCATGCCGTCAAGCACCAGGACAGCGGTGCCCTGGTCGGCTTCAGCTGCCCCGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CAA 90 bp CCGTGTGTGGGTGCTGTCCTGGCCGGCCTGGCAGCAGTAAGTGCCTaGGTCCTCAGGTCGAACGTCATGGATGACCAGGCTGTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: PCVGAVLAGLAAVSA*VLRSNVMDDQAVGG
Trigger: CCCACCCACAGCCTGGTCATCCATGACGTTCGACCTGAGGACCAAGGCACTTACTGCTGCCAGGCCGGCCAGGACAGCACCCACACACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000462534.5
ENST00000465149.1
ENST00000489804.5
CDS CAA 90 bp AACCCATCAGCTCCCAGGCGCCCTCACCCTCCTGCCGCTGCCCAGTaGGCTTTACTCACCCTCTACCAGCAGCCGTGTGTGGGTGCTGTC +
Preference number: 6 (lower is better)
Translates to: NPSAPRRPHPPAAAQ*ALLTLYQQPCVGAV
Trigger: GACAGCACCCACACACGGCTGCTGGTAGAGGGTGAGTAAAGCCAACTGGGCAGCGGCAGGAGGGTGAGGGCGCCTGGGAGCTGATGGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465149.1
CDS TCA 72 bp CGTGGAACACCACGTGGGGACTACGGCCATGTCCGCTaGCTGTGCAGATGCGGAAGCGGTAGTCACCCTCGG +
Preference number: 6 (lower is better)
Translates to: RGTPRGDYGHVR*LCRCGSGSHPR
Trigger: CCGAGGGTGACTACCGCTTCCGCATCTGCACAGTCAGCGGACATGGCCGTAGTCCCCACGTGGTGTTCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS TCA 72 bp GCAGCGCAGGGAATCCGCTGTGAAGGAGACACAGCCTaGGTCGGCCAGGCCCAGGCCATTGAGTACCAGTCG +
Preference number: 6 (lower is better)
Translates to: AAQGIRCEGDTA*VGQAQAIEYQS
Trigger: CGACTGGTACTCAATGGCCTGGGCCTGGCCGACTCAGGCTGTGTCTCCTTCACAGCGGATTCCCTGCGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000596474.1
CDS GCA 72 bp CCACACGCTCCAGGCGCACGGCTGCCACATACACCTTaGCGCTGGGATACACGATCCACGAGGAGACGTCTG +
Preference number: 6 (lower is better)
Translates to: PHAPGARLPHTP*RWDTRSTRRRL
Trigger: CAGACGTCTCCTCGTGGATCGTGTATCCCAGCGGCAAGGTGTATGTGGCAGCCGTGCGCCTGGAGCGTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CCA 72 bp CCGCTCCAGCCGGTAGATGAATGGGGTCTCGGGAGCTaGCTCGGGAGGCTTCCAGGTCAACAGGACCGTGTT +
Preference number: 6 (lower is better)
Translates to: PLQPVDEWGLGS*LGRLPGQQDRV
Trigger: AACACGGTCCTGTTGACCTGGAAGCCTCCCGAGCCAGCTCCCGAGACCCCATTCATCTACCGGCTGGAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CCA 72 bp GGCCCCATTGCGCAGCCAGGTGACATCGGCATCTGGTaGGGAGACTTCACACCGGAACGTGGCATCATCGCC +
Preference number: 6 (lower is better)
Translates to: GPIAQPGDIGIW*GDFTPERGIIA
Trigger: GGCGATGATGCCACGTTCCGGTGTGAAGTCTCCCCACCAGATGCCGATGTCACCTGGCTGCGCAATGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS CCA 72 bp AAGATGCGGCTTGAACCATTCTGGGCCATCTCCACCTaGGGCCCTGGAGTGACGACGGCCCCATTGCGCAGC +
Preference number: 6 (lower is better)
Translates to: KMRLEPFWAIST*GPGVTTAPLRS
Trigger: GCTGCGCAATGGGGCCGTCGTCACTCCAGGGCCCCAGGTGGAGATGGCCCAGAATGGTTCAAGCCGCATCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS CCA 72 bp CCCCTGGCAGAGCCTGGACACCAGTACACAAAGAGCTaGGCCCCCAGGTTCTGCCCTACCCTTTCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: PLAEPGHQYTKS*APRFCPTLSGP
Trigger: AGGCCCAGAAAGGGTAGGGCAGAACCTGGGGGCCCAGCTCTTTGTGTACTGGTGTCCAGGCTCTGCCAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465149.1
CDS CAA 72 bp CAGCTGAAGCCGACCAGGGCACCGCTGTCCTGGTGCTaGACGGCATGCAGGATGAGTCTGTGCTGCAGACCC +
Preference number: 6 (lower is better)
Translates to: QLKPTRAPLSWC*TACRMSLCCRP
Trigger: GGGTCTGCAGCACAGACTCATCCTGCATGCCGTCAAGCACCAGGACAGCGGTGCCCTGGTCGGCTTCAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CAA 72 bp ACAGCAGCTCTGTCTCTCGAACATGGAGCCGGGCACTaGTGGCCGTGCTCCCTGCCCGCAAAGTCACGGTCC +
Preference number: 6 (lower is better)
Translates to: TAALSLEHGAGH*WPCSLPAKSRS
Trigger: GGACCGTGACTTTGCGGGCAGGGAGCACGGCCACAAGTGCCCGGCTCCATGTTCGAGAGACAGAGCTGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS CAA 90 bp CAGGTCAGCACCACACGCTCCAGGCGCACGGCTGCCACATACACCTaGCCGCTGGGATACACGATCCACGAGGAGACGTCTGTGATGGTG +
Preference number: 6 (lower is better)
Translates to: QVSTTRSRRTAATYT*PLGYTIHEETSVMV
Trigger: CACCATCACAGACGTCTCCTCGTGGATCGTGTATCCCAGCGGCAAGGTGTATGTGGCAGCCGTGCGCCTGGAGCGTGTGGTGCTGACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 72 bp GAGTTGGGTACTTTACATTCCAGCACGGCAATCCCGTaGTCACGGCCCTCCACGTCCTGCAGGGGCCGTGTG +
Preference number: 6 (lower is better)
Translates to: ELGTLHSSTAIP*SRPSTSCRGRV
Trigger: CACACGGCCCCTGCAGGACGTGGAGGGCCGTGAGCACGGGATTGCCGTGCTGGAATGTAAAGTACCCAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 72 bp CCGACCAGGGCACCGCTGTCCTGGTGCTTGACGGCATaGAGGATGAGTCTGTGCTGCAGACCCTTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: PTRAPLSWCLTA*RMSLCCRPFCS
Trigger: AGAGCAGAAGGGTCTGCAGCACAGACTCATCCTGCATGCCGTCAAGCACCAGGACAGCGGTGCCCTGGTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 72 bp TCTCCTAGTTGCCCTCTACCAGCAGCCGTGTGTGGGTaGTGTCCTGGCCGGCCTGGCAGCAGTAAGTGCCTT +
Preference number: 6 (lower is better)
Translates to: SPSCPLPAAVCG*CPGRPGSSKCL
Trigger: AAGGCACTTACTGCTGCCAGGCCGGCCAGGACAGCACCCACACACGGCTGCTGGTAGAGGGCAACTAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000462534.5
CDS GCA 72 bp GGCTTTACTCACCCTCTACCAGCAGCCGTGTGTGGGTaGTGTCCTGGCCGGCCTGGCAGCAGTAAGTGCCTT +
Preference number: 6 (lower is better)
Translates to: GFTHPLPAAVCG*CPGRPGSSKCL
Trigger: AAGGCACTTACTGCTGCCAGGCCGGCCAGGACAGCACCCACACACGGCTGCTGGTAGAGGGTGAGTAAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465149.1
CDS CCA 72 bp CCGGAACGTGGCATCATCGCCCTCGTGGACAGTGAGTaGTGTCAGCTCCGAGACCAGCTTCACCAGCAGTGG +
Preference number: 6 (lower is better)
Translates to: PERGIIALVDSE*CQLRDQLHQQW
Trigger: CCACTGCTGGTGAAGCTGGTCTCGGAGCTGACACCACTCACTGTCCACGAGGGCGATGATGCCACGTTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS CCA 72 bp GACGGCCCCATTGCGCAGCCAGGTGACATCGGCATCTaGTGGGGAGACTTCACACCGGAACGTGGCATCATC +
Preference number: 6 (lower is better)
Translates to: DGPIAQPGDIGI*WGDFTPERGII
Trigger: GATGATGCCACGTTCCGGTGTGAAGTCTCCCCACCAGATGCCGATGTCACCTGGCTGCGCAATGGGGCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS CAA 72 bp ACCACACGCTCCAGGCGCACGGCTGCCACATACACCTaGCCGCTGGGATACACGATCCACGAGGAGACGTCT +
Preference number: 6 (lower is better)
Translates to: TTRSRRTAATYT*PLGYTIHEETS
Trigger: AGACGTCTCCTCGTGGATCGTGTATCCCAGCGGCAAGGTGTATGTGGCAGCCGTGCGCCTGGAGCGTGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CAA 72 bp CTGGCTCCCCAGGGGCCACACAGAGCGGGCTTGGAGTaGTCTCTAGAGCAAGGAACTGCACTGGAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: LAPQGPHRAGLE*SLEQGTALEAQ
Trigger: CTGAGCCTCCAGTGCAGTTCCTTGCTCTAGAGACAACTCCAAGCCCGCTCTGTGTGGCCCCTGGGGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000603926.5
CDS CAA 72 bp CCCCCAGTTGGCAGCCTCGCAAGGTTAAGATGCGGCTaGAACCATTCTGGGCCATCTCCACCTGGGGCCCTG +
Preference number: 6 (lower is better)
Translates to: PPVGSLARLRCG*NHSGPSPPGAL
Trigger: CAGGGCCCCAGGTGGAGATGGCCCAGAATGGTTCAAGCCGCATCTTAACCTTGCGAGGCTGCCAACTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS CAA 72 bp GGTGCTGTCCTGGCCGGCCTGGCAGCAGTAAGTGCCTaGGTCCTCAGGTCGAACGTCATGGATGACCAGGCT +
Preference number: 6 (lower is better)
Translates to: GAVLAGLAAVSA*VLRSNVMDDQA
Trigger: AGCCTGGTCATCCATGACGTTCGACCTGAGGACCAAGGCACTTACTGCTGCCAGGCCGGCCAGGACAGCACC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000462534.5
ENST00000465149.1
ENST00000489804.5
CDS CAA 72 bp CTGGCTCCCCAGGGGCCACACAGAGCGGGCTTGGAGTaGTCTCTAGAGCAAGGAACTGCACTGGAGGCTCTG +
Preference number: 6 (lower is better)
Translates to: LAPQGPHRAGLE*SLEQGTALEAL
Trigger: CAGAGCCTCCAGTGCAGTTCCTTGCTCTAGAGACAACTCCAAGCCCGCTCTGTGTGGCCCCTGGGGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465149.1
ENST00000604031.5
CDS TCA 72 bp CGCCCGGCACCTCCACGGCTCCGGCTTTCTCGATGCTaGAGCACTGAATCCAGTCTTCAGAGCCCACTTCCT +
Preference number: 6 (lower is better)
Translates to: RPAPPRLRLSRC*STESSLQSPLP
Trigger: AGGAAGTGGGCTCTGAAGACTGGATTCAGTGCTTCAGCATCGAGAAAGCCGGAGCCGTGGAGGTGCCGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS TCA 72 bp CACACCGGAACGTGGCATCATCGCCCTCGTGGACAGTaGGTGGTGTCAGCTCCGAGACCAGCTTCACCAGCA +
Preference number: 6 (lower is better)
Translates to: HTGTWHHRPRGQ*VVSAPRPASPA
Trigger: TGCTGGTGAAGCTGGTCTCGGAGCTGACACCACTCACTGTCCACGAGGGCGATGATGCCACGTTCCGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS GCA 72 bp ACGGCATGCAGGATGAGTCTGTGCTGCAGACCCTTCTaGTCTATACGGTACCGCAGGGCCCCAGGTTCCACC +
Preference number: 6 (lower is better)
Translates to: TACRMSLCCRPF*SIRYRRAPGST
Trigger: GGTGGAACCTGGGGCCCTGCGGTACCGTATAGAGCAGAAGGGTCTGCAGCACAGACTCATCCTGCATGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 72 bp AAGGTCAACGACACCCTGTCCTGGGGGCTCAGGATGTaGACCGGGCTCTCTTGGATTGTGAGGGCAGCTGAG +
Preference number: 6 (lower is better)
Translates to: KVNDTLSWGLRM*TGLSWIVRAAE
Trigger: CTCAGCTGCCCTCACAATCCAAGAGAGCCCGGTGCACATCCTGAGCCCCCAGGACAGGGTGTCGTTGACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 72 bp GCCAGTATGACACCATGGATGAAGAGGCGGTGGATGTaGCCATCCTGGGCCATGGACAGGCGAGAGTCGTGG +
Preference number: 6 (lower is better)
Translates to: ASMTPWMKRRWM*PSWAMDRRESW
Trigger: CCACGACTCTCGCCTGTCCATGGCCCAGGATGGGCACATCCACCGCCTCTTCATCCATGGTGTCATACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000603926.5
ENST00000604031.5
CDS GCA 72 bp AAGGGCACCCGCCTGGCCTGGTTAGGTTCTCCTAGTTaGCTGCAGAGGAATGACTCCACATGGGGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: KGTRLAWLGSPS*LQRNDSTWGWG
Trigger: TCCCCAGCCCCATGTGGAGTCATTCCTCTGCAGGCAACTAGGAGAACCTAACCAGGCCAGGCGGGTGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465149.1
CDS GCA 72 bp GGTCCTGGAGGCCACACCTCTCACAATGAGTCTGGCTaGGCAGCGCAGGGAATCCGCTGTGAAGGAGACACA +
Preference number: 6 (lower is better)
Translates to: GPGGHTSHNESG*AAQGIRCEGDT
Trigger: TGTGTCTCCTTCACAGCGGATTCCCTGCGCTGCGCAGCCAGACTCATTGTGAGAGGTGTGGCCTCCAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596474.1
CDS CCA 72 bp GGTCCTCACGGAACCAGGCCGTGGGGATGCGGGAGTTaGGTACTTTACATTCCAGCACGGCAATCCCGTGCT +
Preference number: 6 (lower is better)
Translates to: GPHGTRPWGCGS*VLYIPARQSRA
Trigger: AGCACGGGATTGCCGTGCTGGAATGTAAAGTACCCAACTCCCGCATCCCCACGGCCTGGTTCCGTGAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CCA 72 bp AGGGAGGTGGGACAGAGGAATGTGGGCCCCAAACTATaGGGGCAGCTGCTACTCAGTGCCAGCTGTTCGTCG +
Preference number: 6 (lower is better)
Translates to: REVGQRNVGPKL*GQLLLSASCSS
Trigger: CGACGAACAGCTGGCACTGAGTAGCAGCTGCCCCCATAGTTTGGGGCCCACATTCCTCTGTCCCACCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289656.3
ENST00000373873.8
CDS CCA 72 bp CCTGCCCGCAAAGTCACGGTCCCTGCATCCCCCAGTTaGCAGCCTCGCAAGGTTAAGATGCGGCTTGAACCA +
Preference number: 6 (lower is better)
Translates to: PARKVTVPASPS*QPRKVKMRLEP
Trigger: TGGTTCAAGCCGCATCTTAACCTTGCGAGGCTGCCAACTGGGGGATGCAGGGACCGTGACTTTGCGGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS CCA 72 bp TGGTCGGCCAGTATGACACCATGGATGAAGAGGCGGTaGATGTGCCCATCCTGGGCCATGGACAGGCGAGAG +
Preference number: 6 (lower is better)
Translates to: WSASMTPWMKRR*MCPSWAMDRRE
Trigger: CTCTCGCCTGTCCATGGCCCAGGATGGGCACATCCACCGCCTCTTCATCCATGGTGTCATACTGGCCGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000465149.1
ENST00000603926.5
ENST00000604031.5
CDS CAA 72 bp TGGTCCTCACGGAACCAGGCCGTGGGGATGCGGGAGTaGGGTACTTTACATTCCAGCACGGCAATCCCGTGC +
Preference number: 6 (lower is better)
Translates to: WSSRNQAVGMRE*GTLHSSTAIPC
Trigger: GCACGGGATTGCCGTGCTGGAATGTAAAGTACCCAACTCCCGCATCCCCACGGCCTGGTTCCGTGAGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS CAA 90 bp TACCGCAGGGCCCCAGGTTCCACCTGGCCCTCCGGCTCGTTACTCTaGAGCTCTTCCCCATTAAGGAACCAGGTACCCTGGATGATGGTG +
Preference number: 6 (lower is better)
Translates to: YRRAPGSTWPSGSLL*SSSPLRNQVPWMMV
Trigger: CACCATCATCCAGGGTACCTGGTTCCTTAATGGGGAAGAGCTCAAGAGTAACGAGCCGGAGGGCCAGGTGGAACCTGGGGCCCTGCGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS TCA 72 bp AGAGCTCACAAGTCAGCACCACCCGCTCTGAGGTTGTaGAGGTCAACGACACCCTGTCCTGGGGGCTCAGGA +
Preference number: 6 (lower is better)
Translates to: RAHKSAPPALRL*RSTTPCPGGSG
Trigger: TCCTGAGCCCCCAGGACAGGGTGTCGTTGACCTTCACAACCTCAGAGCGGGTGGTGCTGACTTGTGAGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 72 bp GCCCCGCATCTCGCACAGGTAGATACCATCATCGTCTaGCTTCAGCCTGTGGATGATGAGGCGCCGGACAGT +
Preference number: 6 (lower is better)
Translates to: APHLAQVDTIIV*LQPVDDEAPDS
Trigger: ACTGTCCGGCGCCTCATCATCCACAGGCTGAAGGCAGACGATGATGGTATCTACCTGTGCGAGATGCGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 72 bp TCCTGGTGCTTGACGGCATGCAGGATGAGTCTGTGCTaGAGACCCTTCTGCTCTATACGGTACCGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: SWCLTACRMSLC*RPFCSIRYRRA
Trigger: GGCCCTGCGGTACCGTATAGAGCAGAAGGGTCTGCAGCACAGACTCATCCTGCATGCCGTCAAGCACCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 72 bp CTGCATCCCCCAGTTGGCAGCCTCGCAAGGTTAAGATaGGGCTTGAACCATTCTGGGCCATCTCCACCTGGG +
Preference number: 6 (lower is better)
Translates to: LHPPVGSLARLR*GLNHSGPSPPG
Trigger: CCCAGGTGGAGATGGCCCAGAATGGTTCAAGCCGCATCTTAACCTTGCGAGGCTGCCAACTGGGGGATGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000472388.1
ENST00000603926.5
ENST00000604031.5
CDS GCA 72 bp GGACACCAGTACACAAAGAGCTGGGCCCCCAGGTTCTaGCCTACCCTTTCTGGGCCTTGGTTAGGGCTGTCT +
Preference number: 6 (lower is better)
Translates to: GHQYTKSWAPRF*PTLSGPWLGLS
Trigger: AGACAGCCCTAACCAAGGCCCAGAAAGGGTAGGGCAGAACCTGGGGGCCCAGCTCTTTGTGTACTGGTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465149.1
CDS GCA 72 bp CGCCCGCCAGGCTTGGGCCTGAGTGGCAGAGGCGCCTaGAGCTGCCAATCCCAAAAATATTCTCTGATGACA +
Preference number: 6 (lower is better)
Translates to: RPPGLGLSGRGA*SCQSQKYSLMT
Trigger: TGTCATCAGAGAATATTTTTGGGATTGGCAGCTGCAGGCGCCTCTGCCACTCAGGCCCAAGCCTGGCGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491370.1
CDS GCA 72 bp AAGGGCACCCGCCTGGCCTGGTTAGGTTCTCCTAGTTaGCTGCAGAGGAATGACTCCACATGGGGCCTCTAC +
Preference number: 6 (lower is better)
Translates to: KGTRLAWLGSPS*LQRNDSTWGLY
Trigger: GTAGAGGCCCCATGTGGAGTCATTCCTCTGCAGGCAACTAGGAGAACCTAACCAGGCCAGGCGGGTGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489804.5
CDS CAA 90 bp CGTAAGCGCGTTCCCGTCCTTCTCCCAGGTAACATCAGCCAAAGCTaGGGAAAGCTCGCACTCGAACGTAGCTGTGTCGCCCTCGGTCAC +
Preference number: 6 (lower is better)
Translates to: RKRVPVLLPGNISQS*GKLALERSCVALGH
Trigger: GTGACCGAGGGCGACACAGCTACGTTCGAGTGCGAGCTTTCCCAAGCTTTGGCTGATGTTACCTGGGAGAAGGACGGGAACGCGCTTACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS CAA 90 bp GAGACCCCTTCTGTCCTGCACTCAAACTCGCCACTGTCCTGGACTTaGGCCTCAGGCAGGATCAGACGGTGTTTGCGCCCATCCATCTTC +
Preference number: 6 (lower is better)
Translates to: ETPSVLHSNSPLSWT*ASGRIRRCLRPSIF
Trigger: GAAGATGGATGGGCGCAAACACCGTCTGATCCTGCCTGAGGCCAAAGTCCAGGACAGTGGCGAGTTTGAGTGCAGGACAGAAGGGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000462385.1
ENST00000465149.1
ENST00000603926.5
CDS TCA 72 bp AGAAAGGTGGGAACAGCTGACCAGGAGCAGCTGATCTaGGCCAAGCAGTTCCAGGGCTTTCCAGCCCTGGGT +
Preference number: 6 (lower is better)
Translates to: RKVGTADQEQLI*AKQFQGFPALG
Trigger: ACCCAGGGCTGGAAAGCCCTGGAACTGCTTGGCTCAGATCAGCTGCTCCTGGTCAGCTGTTCCCACCTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465149.1
CDS GCA 72 bp CTGTCCTGGTGCTTGACGGCATGCAGGATGAGTCTGTaGTGCAGACCCTTCTGCTCTATACGGTACCGCAGG +
Preference number: 6 (lower is better)
Translates to: LSWCLTACRMSL*CRPFCSIRYRR
Trigger: CCTGCGGTACCGTATAGAGCAGAAGGGTCTGCAGCACAGACTCATCCTGCATGCCGTCAAGCACCAGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS GCA 72 bp GATGGTCACTGGGACCTCTCTCACAATGAGTCTGGCTaGGCAGCGCAGGGAATCCGCTGTGAAGGAGACACA +
Preference number: 6 (lower is better)
Translates to: DGHWDLSHNESG*AAQGIRCEGDT
Trigger: TGTGTCTCCTTCACAGCGGATTCCCTGCGCTGCGCAGCCAGACTCATTGTGAGAGAGGTCCCAGTGACCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373876.5
ENST00000404537.6
CDS CCA 72 bp CTGTCCTGCACTCAAACTCGCCACTGTCCTGGACTTTaGCCTCAGGCAGGATCAGACGGTGTTTGCGCCCAT +
Preference number: 6 (lower is better)
Translates to: LSCTQTRHCPGL*PQAGSDGVCAH
Trigger: ATGGGCGCAAACACCGTCTGATCCTGCCTGAGGCCAAAGTCCAGGACAGTGGCGAGTTTGAGTGCAGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000462385.1
ENST00000465149.1
ENST00000603926.5
CDS CCA 72 bp TGGTCCTCAGGTCGAACGTCATGGATGACCAGGCTGTaGGTGGGGCCGTGGCTGCGCATCTCATACTTATCT +
Preference number: 6 (lower is better)
Translates to: WSSGRTSWMTRL*VGPWLRISYLS
Trigger: AGATAAGTATGAGATGCGCAGCCACGGCCCCACCCACAGCCTGGTCATCCATGACGTTCGACCTGAGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000462534.5
ENST00000465149.1
ENST00000489804.5
CDS CCA 72 bp GGGCCTGAGGGACTCCAGGACAGCCAGAAAAGGCTGTaGTGTAGGGTGGGTAATGCATTAAGAGAGGACGGG +
Preference number: 6 (lower is better)
Translates to: GPEGLQDSQKRL*CRVGNALREDG
Trigger: CCCGTCCTCTCTTAATGCATTACCCACCCTACACCACAGCCTTTTCTGGCTGTCCTGGAGTCCCTCAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456147.1
ENST00000603926.5
ENST00000604031.5
CDS CCA 72 bp GGTTCTCCTAGTTGCCTGCAGAGGAATGACTCCACATaGGGCTGGGGAGAGAAGGGGGTACCACCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: GSPSCLQRNDST*GWGEKGVPPSS
Trigger: AGAGGAAGGTGGTACCCCCTTCTCTCCCCAGCCCCATGTGGAGTCATTCCTCTGCAGGCAACTAGGAGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465149.1
CDS CCA 72 bp GCAGGGATGTCAATGAGGGCCACACTGAGACAGGCATaGTCAGTGGGGGTCACACGAGTTGGGGGTCAGTAT +
Preference number: 6 (lower is better)
Translates to: AGMSMRATLRQA*SVGVTRVGGQY
Trigger: ATACTGACCCCCAACTCGTGTGACCCCCACTGACCATGCCTGTCTCAGTGTGGCCCTCATTGACATCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000596474.1
CDS CAA 72 bp TCTGTCCTGCACTCAAACTCGCCACTGTCCTGGACTTaGGCCTCAGGCAGGATCAGACGGTGTTTGCGCCCA +
Preference number: 6 (lower is better)
Translates to: SVLHSNSPLSWT*ASGRIRRCLRP
Trigger: TGGGCGCAAACACCGTCTGATCCTGCCTGAGGCCAAAGTCCAGGACAGTGGCGAGTTTGAGTGCAGGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000462385.1
ENST00000465149.1
ENST00000603926.5
CDS GCA 72 bp CCAGGCTTGGGCCTGAGTGGCAGAGGCGCCTGCAGCTaGCAATCCCAAAAATATTCTCTGATGACACAGCTG +
Preference number: 6 (lower is better)
Translates to: PGLGLSGRGACS*QSQKYSLMTQL
Trigger: CAGCTGTGTCATCAGAGAATATTTTTGGGATTGGCAGCTGCAGGCGCCTCTGCCACTCAGGCCCAAGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491370.1
CDS CCA 72 bp ACCCCTTCTGTCCTGCACTCAAACTCGCCACTGTCCTaGACTTTGGCCTCAGGCAGGATCAGACGGTGTTTG +
Preference number: 6 (lower is better)
Translates to: TPSVLHSNSPLS*TLASGRIRRCL
Trigger: CAAACACCGTCTGATCCTGCCTGAGGCCAAAGTCCAGGACAGTGGCGAGTTTGAGTGCAGGACAGAAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000462385.1
ENST00000465149.1
ENST00000603926.5
CDS CCA 72 bp CCTACGTATCCCAGGACCCGTTGCCACCCCAAGTTCTaGAAAGCCTCCCATAGGTGTGGCTTAACCCATCAG +
Preference number: 6 (lower is better)
Translates to: PTYPRTRCHPKF*KASHRCGLTHQ
Trigger: CTGATGGGTTAAGCCACACCTATGGGAGGCTTTCCAGAACTTGGGGTGGCAACGGGTCCTGGGATACGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465149.1
CDS CAA 72 bp GCAAGGAACTGCACTGGAGGCTCAGCCAGGATGACATaGAAGGTGATGGCCTCATGCCGGGTCTCACACACA +
Preference number: 6 (lower is better)
Translates to: ARNCTGGSARMT*KVMASCRVSHT
Trigger: TGTGTGTGAGACCCGGCATGAGGCCATCACCTTCAATGTCATCCTGGCTGAGCCTCCAGTGCAGTTCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373876.5
ENST00000404537.6
ENST00000456147.1
ENST00000603926.5
CDS CAA 90 bp CTGTGCTTGACACATTTTACTCTGAGAAGCGTAGTGGTACGGGAGTaGCCCAGGCTAAAGGTGACCTCGCCAGCATCCTCTCGGGTGACC +
Preference number: 6 (lower is better)
Translates to: LCLTHFTLRSVVVRE*PRLKVTSPASSRVT
Trigger: GGTCACCCGAGAGGATGCTGGCGAGGTCACCTTTAGCCTGGGCAACTCCCGTACCACTACGCTTCTCAGAGTAAAATGTGTCAAGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5
CDS TCA 72 bp CAGGCCCTCGTCCCCAGTCATTTAACAGACCTTCTGTaGGGACCTACTATGTATCGACCACACCGATGGCCC +
Preference number: 6 (lower is better)
Translates to: QALVPSHLTDLL*GPTMYRPHRWP
Trigger: GGGCCATCGGTGTGGTCGATACATAGTAGGTCCTCACAGAAGGTCTGTTAAATGACTGGGGACGAGGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472388.1
CDS GCA 72 bp TCACAGGCCAGCATGACACACTCGGAAGTTATGGCATaGACGAACACATGTTCTCGGGGGTCCACGATGTGC +
Preference number: 6 (lower is better)
Translates to: SQASMTHSEVMA*TNTCSRGSTMC
Trigger: GCACATCGTGGACCCCCGAGAACATGTGTTCGTGCATGCCATAACTTCCGAGTGTGTCATGCTGGCCTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000462385.1
ENST00000465149.1
ENST00000603926.5
CDS CCA 72 bp AGCCTCGGCTGTAGAAACGCTCCACATTCTCTGGGTTaGGACAGGGACGGTATGAAGGGTGGAACTGATGAG +
Preference number: 6 (lower is better)
Translates to: SLGCRNAPHSLG*DRDGMKGGTDE
Trigger: CTCATCAGTTCCACCCTTCATACCGTCCCTGTCCCAACCCAGAGAATGTGGAGCGTTTCTACAGCCGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462385.1
CDS CAA 72 bp CAGGAAGGAGGAGGGACAGGCTGGAGGAAGGCAGTGTaGGTGAAGTGGGGAGGAAAGGAACTGGTAGAAACA +
Preference number: 6 (lower is better)
Translates to: QEGGGTGWRKAV*VKWGGKELVET
Trigger: TGTTTCTACCAGTTCCTTTCCTCCCCACTTCACCAACACTGCCTTCCTCCAGCCTGTCCCTCCTCCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465149.1
CDS GCA 72 bp TATGTATCGACCACACCGATGGCCCAAAGGACAAGATaGCAGCTCCCTGCCACTCCTTTTAGTCAGTTCCTC +
Preference number: 6 (lower is better)
Translates to: YVSTTPMAQRTR*QLPATPFSQFL
Trigger: GAGGAACTGACTAAAAGGAGTGGCAGGGAGCTGGCATCTTGTCCTTTGGGCCATCGGTGTGGTCGATACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472388.1
CDS CAA 72 bp ACACATTTTACTCTGAGAAGCGTAGTGGTACGGGAGTaGCCCAGGCTAAAGGTGACCTCGCCAGCATCCTCT +
Preference number: 6 (lower is better)
Translates to: THFTLRSVVVRE*PRLKVTSPASS
Trigger: AGAGGATGCTGGCGAGGTCACCTTTAGCCTGGGCAACTCCCGTACCACTACGCTTCTCAGAGTAAAATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289656.3
ENST00000373873.8
ENST00000373876.5
ENST00000404537.6
ENST00000465149.1
ENST00000603926.5