RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OAZ3 (Homo sapiens)

Ensembl gene IDs: ENSG00000143450

Ensembl transcript IDs: ENST00000321531.10, ENST00000400999.7, ENST00000453029.2, ENST00000479764.7, ENST00000577465.1, ENST00000582415.2, ENST00000627780.2, ENST00000635179.1, ENST00000635322.1, ENST00000635374.1

Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACCATAAAGATGACATTGTCCAAGGGAGGGAGGGCAGGGTGATCTaGTCTGACCACCTCAAAGCCCATGTAGCTGAAGGCCCGCAGCAG +
Preference number: 1 (lower is better)
Translates to: HHKDDIVQGREGRVI*SDHLKAHVAEGPQQ
Trigger: CTGCTGCGGGCCTTCAGCTACATGGGCTTTGAGGTGGTCAGACCAGATCACCCTGCCCTCCCTCCCTTGGACAATGTCATCTTTATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479764.7
ENST00000635322.1
3UTR CCA 90 bp GGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTaGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACA +
Preference number: 1 (lower is better)
Translates to: GPLIPCVKASSPSKR*NKHVQGGSLGRWPT
Trigger: TGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
3UTR TCA 90 bp TTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTaGTTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATA +
Preference number: 1 (lower is better)
Translates to: FIPRMESVLNHIPGP*FHVSRLPAPQSVGI
Trigger: TATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000627780.2
ENST00000635322.1
ENST00000635374.1
3UTR CCA 90 bp TCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTaGCCAACATCCCTTTCAAGGGGATACACCATAAAGATGACATTG +
Preference number: 1 (lower is better)
Translates to: SKRWNKHVQGGSLGR*PTSLSRGYTIKMTL
Trigger: CAATGTCATCTTTATGGTGTATCCCCTTGAAAGGGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
3UTR-3UTR TCA 90 bp GCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAAAGCCCATGTAGCTaGAGGCCCGCAGCAGGGCAC +
Preference number: 2 (lower is better)
Translates to: APQSVGISMFKEAHWAGGQSPCS*RPAAGH
Trigger: GTGCCCTGCTGCGGGCCTTCAGCTACATGGGCTTTG...GCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479764.7
ENST00000635322.1
3UTR-3UTR TCA 90 bp ATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGCACATCCCGGGCCCCTaGTTCCATGTGTCAAGGCTT +
Preference number: 2 (lower is better)
Translates to: ITSRAPDSMCQGFQPLKAHIPGP*FHVSRL
Trigger: AAGCCTTGACACATGGAATCAGGGGCCCGGGATGTG...CGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000627780.2
ENST00000635322.1
ENST00000635374.1
3UTR-3UTR TCA 90 bp ACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGCACATCCCGGGCCCCTaGTTCCATGTGTCAAGGCTT +
Preference number: 2 (lower is better)
Translates to: TSRAPDSMCQGFQPLKALHIPGP*FHVSRL
Trigger: AAGCCTTGACACATGGAATCAGGGGCCCGGGATGTG...CAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000627780.2
ENST00000635322.1
ENST00000635374.1
3UTR-3UTR TCA 90 bp ACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGGATGGAAAGTGTCCTaGATCACATCCCGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: TSRAPDSMCQGFQPLKALGWKVS*ITSRAP
Trigger: AGGGGCCCGGGATGTGATTCAGGACACTTTCCATCC...CAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000627780.2
ENST00000635322.1
ENST00000635374.1
3UTR-3UTR CCA 90 bp ACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGTTCAAGGAGGCTCACTaGGCAGGTGGCCAACATCCC +
Preference number: 2 (lower is better)
Translates to: TSRAPDSMCQGFQPLKALFKEAH*AGGQHP
Trigger: GGGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAA...CAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
3UTR-3UTR TCA 90 bp CCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTCACATCCCGGGCCCCTaGTTCCATGTGTCAAGGCTT +
Preference number: 2 (lower is better)
Translates to: PAPQSVGISMFKEAHWAGHIPGP*FHVSRL
Trigger: AAGCCTTGACACATGGAATCAGGGGCCCGGGATGTG...ACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
3UTR-3UTR TCA 90 bp AGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACATCCCCACATCCCGGGCCCCTaGTTCCATGTGTCAAGGCTT +
Preference number: 2 (lower is better)
Translates to: SVGISMFKEAHWAGGQHPHIPGP*FHVSRL
Trigger: AAGCCTTGACACATGGAATCAGGGGCCCGGGATGTG...GGGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
3UTR-3UTR CCA 90 bp GCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCGAGGGCAGGGTGATCTaGTCTGACCACCTCAAAGCC +
Preference number: 2 (lower is better)
Translates to: ASSPSKRWNKHVQGGSLGEGRVI*SDHLKA
Trigger: GGCTTTGAGGTGGTCAGACCAGATCACCCTGCCCTC...GCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479764.7
ENST00000635322.1
3UTR-3UTR CCA 90 bp ATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGAGGGCAGGGTGATCTaGTCTGACCACCTCAAAGCC +
Preference number: 2 (lower is better)
Translates to: IPCVKASSPSKRWNKHVQEGRVI*SDHLKA
Trigger: GGCTTTGAGGTGGTCAGACCAGATCACCCTGCCCTC...TTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479764.7
ENST00000635322.1
3UTR CCA 72 bp GATGACATTGTCCAAGGGAGGGAGGGCAGGGTGATCTaGTCTGACCACCTCAAAGCCCATGTAGCTGAAGGC +
Preference number: 3 (lower is better)
Translates to: DDIVQGREGRVI*SDHLKAHVAEG
Trigger: GCCTTCAGCTACATGGGCTTTGAGGTGGTCAGACCAGATCACCCTGCCCTCCCTCCCTTGGACAATGTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479764.7
ENST00000635322.1
3UTR TCA 72 bp AGGATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTaGTTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGC +
Preference number: 3 (lower is better)
Translates to: RMESVLNHIPGP*FHVSRLPAPQS
Trigger: GCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000627780.2
ENST00000635322.1
ENST00000635374.1
3UTR CCA 72 bp ATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTaGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: IPCVKASSPSKR*NKHVQGGSLGR
Trigger: CCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
3UTR-3UTR CAA 90 bp CCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAAACCATAAAGATGACATaGTCCAAGGGAGGGAGGGCA +
Preference number: 3 (lower is better)
Translates to: PQSVGISMFKEAHWAGGQTIKMT*SKGGRA
Trigger: TGCCCTCCCTCCCTTGGACAATGTCATCTTTATGGT...TTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
3UTR CCA 72 bp TGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTaGCCAACATCCCTTTCAAGGGGATACACCATAAAG +
Preference number: 3 (lower is better)
Translates to: WNKHVQGGSLGR*PTSLSRGYTIK
Trigger: CTTTATGGTGTATCCCCTTGAAAGGGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
3UTR TCA 72 bp TTGCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTaGATCACATCCCGGGCCCCTGATTCCATGTGTCAA +
Preference number: 3 (lower is better)
Translates to: LHYPLFLGWKVS*ITSRAPDSMCQ
Trigger: TTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000479764.7
ENST00000582415.2
ENST00000627780.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR GCA 90 bp TCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAAGCCGGAAGCCGCGCCTaGACCGGCGACATCGCGTCT +
Preference number: 4 (lower is better)
Translates to: SRAPDSMCQGFQPLKALEAGSRA*TGDIAS
Trigger: AGACGCGATGTCGCCGGTGCAGGCGCGGCTTCCGGC...TTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321531.10
ENST00000635322.1
CDS-3UTR GCA 90 bp CCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATGCCGGAAGCCGCGCCTaGACCGGCGACATCGCGTCT +
Preference number: 4 (lower is better)
Translates to: PGPLIPCVKASSPSKRWNAGSRA*TGDIAS
Trigger: AGACGCGATGTCGCCGGTGCAGGCGCGGCTTCCGGC...ATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321531.10
ENST00000635322.1
CDS-3UTR CCA 90 bp TGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCAGGGACTCGGAGCACTaGAGGCAGGAACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: CPESHPGPLIPCVKASSPRDSEH*RQERGW
Trigger: CCAGCCCCGTTCCTGCCTCCAGTGCTCCGAGTCCCT...GGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp ATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGAGGGACTCGGAGCACTaGAGGCAGGAACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ITSRAPDSMCQGFQPLKARDSEH*RQERGW
Trigger: CCAGCCCCGTTCCTGCCTCCAGTGCTCCGAGTCCCT...CGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp GATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTCGCCGCAGGCAGCACTaGCGGGGGCCTTTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: DGKCPESHPGPLIPCVKARRRQH*RGPFLP
Trigger: CGGCAGGAAAGGCCCCCGCCAGTGCTGCCTGCGGCG...AGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453029.2
CDS-3UTR CCA 90 bp CCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATGTAATCCCAGCGCTTTaGGAGGCCGAGGCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: PGPLIPCVKASSPSKRWNVIPAL*EAEAGG
Trigger: TCCGCCCGCCTCGGCCTCCCAAAGCGCTGGGATTAC...ATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR GCA 90 bp CCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATTGTGCCCACCCACCCTaGTCCTCTGTGGACACTCCC +
Preference number: 4 (lower is better)
Translates to: PGPLIPCVKASSPSKRWNCAHPP*SSVDTP
Trigger: GGGAGTGTCCACAGAGGAGCAGGGTGGGTGGGCACA...ATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CCA 90 bp TGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCGTCATCGTGGAGCGCTaGTGGAAGGTACCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: CPESHPGPLIPCVKASSPVIVER*WKVPLA
Trigger: GGCCAGCGGTACCTTCCACCAGCGCTCCACGATGAC...GGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321531.10
ENST00000635322.1
CDS-3UTR TCA 90 bp GAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCAAAGCCCATGTAGCTaGAGGCCCGCAGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: ESHPGPLIPCVKASSPSKQSPCS*RPAAGH
Trigger: GTGCCCTGCTGCGGGCCTTCAGCTACATGGGCTTTG...CTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR GCA 90 bp TCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTGGTTACCCTGCTCGGTaGTTTTGCCCTCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SHPGPLIPCVKASSPSKRGYPAR*FCPPGG
Trigger: GCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACC...ACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR GCA 90 bp ACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGGTTACCCTGCTCGGTaGTTTTGCCCTCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: TSRAPDSMCQGFQPLKALGYPAR*FCPPGG
Trigger: GCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACC...CAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp GAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGGATGCGTCGCTTTCCTaGCCGCCAGGGCACGGTCAT +
Preference number: 4 (lower is better)
Translates to: ESHPGPLIPCVKASSPSKDASLS*PPGHGH
Trigger: ATGACCGTGCCCTGGCGGCCAGGAAAGCGACGCATC...CTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321531.10
ENST00000635322.1
CDS-3UTR CCA 90 bp GGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGGGACTCGGAGCACTaGAGGCAGGAACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GKCPESHPGPLIPCVKASRDSEH*RQERGW
Trigger: CCAGCCCCGTTCCTGCCTCCAGTGCTCCGAGTCCCT...GGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp AGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACATCCCAGGGACTCGGAGCACTaGAGGCAGGAACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SVGISMFKEAHWAGGQHPRDSEH*RQERGW
Trigger: CCAGCCCCGTTCCTGCCTCCAGTGCTCCGAGTCCCT...GGGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR TCA 90 bp TCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAACACATCCCGGGCCCCTaGTTCCATGTGTCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: SRAPDSMCQGFQPLKALEHIPGP*FHVSRL
Trigger: AAGCCTTGACACATGGAATCAGGGGCCCGGGATGTG...TTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR TCA 90 bp CCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCACACATCCCGGGCCCCTaGTTCCATGTGTCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: PESHPGPLIPCVKASSPSHIPGP*FHVSRL
Trigger: AAGCCTTGACACATGGAATCAGGGGCCCGGGATGTG...TGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR TCA 90 bp CCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATCTCCCTGTGGCAAAGTaGAGTTCACAGGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PGPLIPCVKASSPSKRWNLPVAK*SSQVGG
Trigger: GCCACCCACCTGTGAACTTCACTTTGCCACAGGGAG...ATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400999.7
ENST00000479764.7
CDS-3UTR TCA 90 bp CCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGCCAAAAGCCCTGCCTaGGCACTTGTGCCCACCCAC +
Preference number: 4 (lower is better)
Translates to: PAPQSVGISMFKEAHWAGAKSPA*ALVPTH
Trigger: GTGGGTGGGCACAAGTGCTCAGGCAGGGCTTTTGGC...ACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR GCA 90 bp ACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGCCTGCTCGGTGCTTTTaGCCTCCTGGAGGCCTACTA +
Preference number: 4 (lower is better)
Translates to: TSRAPDSMCQGFQPLKALPARCF*PPGGLL
Trigger: TAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGG...CAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR GCA 90 bp TCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTCCTGCTCGGTGCTTTTaGCCTCCTGGAGGCCTACTA +
Preference number: 4 (lower is better)
Translates to: SHPGPLIPCVKASSPSKRPARCF*PPGGLL
Trigger: TAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGG...ACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR GCA 90 bp ATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGCCTGCTCGGTGCTTTTaGCCTCCTGGAGGCCTACTA +
Preference number: 4 (lower is better)
Translates to: ITSRAPDSMCQGFQPLKAPARCF*PPGGLL
Trigger: TAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGG...CGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR GCA 90 bp CCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCATGGTCGTGGTTACCCTaGTCGGTGCTTTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PESHPGPLIPCVKASSPSWSWLP*SVLLPS
Trigger: GGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCA...TGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR GCA 90 bp CCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATTGGTCGTGGTTACCCTaGTCGGTGCTTTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PGPLIPCVKASSPSKRWNWSWLP*SVLLPS
Trigger: GGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCA...ATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR GCA 90 bp TCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATGGTCGTGGTTACCCTaGTCGGTGCTTTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SRAPDSMCQGFQPLKALEWSWLP*SVLLPS
Trigger: GGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCA...TTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR GCA 90 bp GCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGGGCCCCATAGGCAAGCCGCGGTaGCATCTGTTCCCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: ALPFIPRMESVLNHIPGPIGKPR*HLFPGP
Trigger: CGGGCCGGGGAACAGATGGCACCGCGGCTTGCCTAT...GGGGCCCGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CCA 90 bp TCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAAAGGCAGGAACGGGGCTaGAGTGTCAAGTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SRAPDSMCQGFQPLKALERQERG*SVKSSS
Trigger: AGAGGAGGACTTGACACTCCAGCCCCGTTCCTGCCT...TTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
CDS-3UTR CCA 90 bp GATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTAGGGACTCGGAGCACTaGAGGCAGGAACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: DGKCPESHPGPLIPCVKARDSEH*RQERGW
Trigger: CCAGCCCCGTTCCTGCCTCCAGTGCTCCGAGTCCCT...AGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp ATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGAGAAGGCCGTGCCAATaGGCAGAGGTCTGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: ITSRAPDSMCQGFQPLKARRPCQ*AEVWEV
Trigger: TACCTCCCAGACCTCTGCCCATTGGCACGGCCTTCT...CGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000635374.1
CDS-3UTR CCA 90 bp CCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAGAAGGCCGTGCCAATaGGCAGAGGTCTGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: PESHPGPLIPCVKASSPSRRPCQ*AEVWEV
Trigger: TACCTCCCAGACCTCTGCCCATTGGCACGGCCTTCT...TGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000635374.1
CDS-3UTR CCA 90 bp ACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGAGAAGGCCGTGCCAATaGGCAGAGGTCTGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: TSRAPDSMCQGFQPLKALRRPCQ*AEVWEV
Trigger: TACCTCCCAGACCTCTGCCCATTGGCACGGCCTTCT...CAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000635374.1
CDS-3UTR CCA 90 bp ACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAGGGCAGGGTGATCTaGTCTGACCACCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: TSRAPDSMCQGFQPLKALEGRVI*SDHLKA
Trigger: GGCTTTGAGGTGGTCAGACCAGATCACCCTGCCCTC...CAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp CCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATTTCAAGGAGGCTCACTaGGCAGGTGGCCAACATCCC +
Preference number: 4 (lower is better)
Translates to: PGPLIPCVKASSPSKRWNFKEAH*AGGQHP
Trigger: GGGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAA...ATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp TCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATTCAAGGAGGCTCACTaGGCAGGTGGCCAACATCCC +
Preference number: 4 (lower is better)
Translates to: SRAPDSMCQGFQPLKALEFKEAH*AGGQHP
Trigger: GGGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAA...TTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp ATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTCAAGGAGGCTCACTaGGCAGGTGGCCAACATCCC +
Preference number: 4 (lower is better)
Translates to: ITSRAPDSMCQGFQPLKAFKEAH*AGGQHP
Trigger: GGGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAA...CGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR TCA 90 bp CCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCACAGGGTGATCTGGTCTaGCCACCTCAAAGCCCATGT +
Preference number: 4 (lower is better)
Translates to: PESHPGPLIPCVKASSPSQGDLV*PPQSPC
Trigger: ACATGGGCTTTGAGGTGGTCAGACCAGATCACCCTG...TGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR TCA 90 bp TGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCCAGGGTGATCTGGTCTaGCCACCTCAAAGCCCATGT +
Preference number: 4 (lower is better)
Translates to: CPESHPGPLIPCVKASSPQGDLV*PPQSPC
Trigger: ACATGGGCTTTGAGGTGGTCAGACCAGATCACCCTG...GGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR TCA 90 bp ACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGCAGGGTGATCTGGTCTaGCCACCTCAAAGCCCATGT +
Preference number: 4 (lower is better)
Translates to: TSRAPDSMCQGFQPLKALQGDLV*PPQSPC
Trigger: ACATGGGCTTTGAGGTGGTCAGACCAGATCACCCTG...CAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR GCA 90 bp GGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGGGTTACCCTGCTCGGTaGTTTTGCCCTCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GPLIPCVKASSPSKRWNKGYPAR*FCPPGG
Trigger: GCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACC...CTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp GGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGGGCACGGTCATCGTaGAGCGCTGGTGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: GKCPESHPGPLIPCVKASRARSS*SAGGRY
Trigger: GTACCTTCCACCAGCGCTCCACGATGACCGTGCCCT...GGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321531.10
ENST00000635322.1
CDS-3UTR CCA 90 bp GAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGAGGCAGGAACGGGGCTaGAGTGTCAAGTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ESHPGPLIPCVKASSPSKRQERG*SVKSSS
Trigger: AGAGGAGGACTTGACACTCCAGCCCCGTTCCTGCCT...CTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
CDS-3UTR CCA 90 bp ACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGAACTGTACTGGGTCCTaGTGGAGCAGGGGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: TSRAPDSMCQGFQPLKALNCTGS*WSRGSV
Trigger: TACTGACCCCCTGCTCCACCAGGACCCAGTACAGTT...CAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000635374.1
CDS-3UTR CCA 90 bp GAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGGAGGGCAGGGTGATCTaGTCTGACCACCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: ESHPGPLIPCVKASSPSKEGRVI*SDHLKA
Trigger: GGCTTTGAGGTGGTCAGACCAGATCACCCTGCCCTC...CTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR TCA 90 bp GAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCAGGGTGATCTGGTCTaGCCACCTCAAAGCCCATGT +
Preference number: 4 (lower is better)
Translates to: ESHPGPLIPCVKASSPSKQGDLV*PPQSPC
Trigger: ACATGGGCTTTGAGGTGGTCAGACCAGATCACCCTG...CTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR TCA 90 bp GGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCCACATCCCGGGCCCCTaGTTCCATGTGTCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: GKCPESHPGPLIPCVKASHIPGP*FHVSRL
Trigger: AAGCCTTGACACATGGAATCAGGGGCCCGGGATGTG...GGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR TCA 90 bp GGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCGGATGGAAAGTGTCCTaGATCACATCCCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GKCPESHPGPLIPCVKASGWKVS*ITSRAP
Trigger: AGGGGCCCGGGATGTGATTCAGGACACTTTCCATCC...GGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR TCA 90 bp AGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGAGGCGGAGCTTGCAGTaGGCTGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: RLPAPQSVGISMFKEAHWRRSLQ*AEIVPL
Trigger: CAGTGGCACGATCTCAGCTCACTGCAAGCTCCGCCT...CCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR TCA 90 bp GCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCAACCTGGTGGCATTGTaGCCCAGTGGGCACTATGAC +
Preference number: 4 (lower is better)
Translates to: APQSVGISMFKEAHWAGGNLVAL*PSGHYD
Trigger: GTCATAGTGCCCACTGGGTCACAATGCCACCAGGTT...GCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR GCA 90 bp CCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAAGGTTACCCTGCTCGGTaGTTTTGCCCTCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PQSVGISMFKEAHWAGGQGYPAR*FCPPGG
Trigger: GCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACC...TTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp GATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTAGGGCACGGTCATCGTaGAGCGCTGGTGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: DGKCPESHPGPLIPCVKARARSS*SAGGRY
Trigger: GTACCTTCCACCAGCGCTCCACGATGACCGTGCCCT...AGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321531.10
ENST00000635322.1
CDS-3UTR CCA 90 bp TCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACGATGCGTCGCTTTCCTaGCCGCCAGGGCACGGTCAT +
Preference number: 4 (lower is better)
Translates to: SRLPAPQSVGISMFKEAHDASLS*PPGHGH
Trigger: ATGACCGTGCCCTGGCGGCCAGGAAAGCGACGCATC...GTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635322.1
CDS-3UTR CCA 90 bp GGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGAGGCAGGAACGGGGCTaGAGTGTCAAGTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GPLIPCVKASSPSKRWNKRQERG*SVKSSS
Trigger: AGAGGAGGACTTGACACTCCAGCCCCGTTCCTGCCT...CTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
CDS-3UTR CCA 90 bp GGCAGGTGGCCAACATCCCTTTCAAGGGGATACACCATAAAGATGACATTGTCCAGGGACTCGGAGCACTaGAGGCAGGAACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRWPTSLSRGYTIKMTLSRDSEH*RQERGW
Trigger: CCAGCCCCGTTCCTGCCTCCAGTGCTCCGAGTCCCT...GGACAATGTCATCTTTATGGTGTATCCCCTTGAAAGGGATGTTGGCCACCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp GGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCGGCTCACTGGGCAGGTaGCCAACATCCCTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: GKCPESHPGPLIPCVKASGSLGR*PTSLSR
Trigger: CCTTGAAAGGGATGTTGGCCACCTGCCCAGTGAGCC...GGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp AGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACATCCCGGCTCACTGGGCAGGTaGCCAACATCCCTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: SVGISMFKEAHWAGGQHPGSLGR*PTSLSR
Trigger: CCTTGAAAGGGATGTTGGCCACCTGCCCAGTGAGCC...GGGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp TCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGGGCTCACTGGGCAGGTaGCCAACATCCCTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: SSPSKRWNKHVQGGSLGRGSLGR*PTSLSR
Trigger: CCTTGAAAGGGATGTTGGCCACCTGCCCAGTGAGCC...CCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp GGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCTTCAAGGAGGCTCACTaGGCAGGTGGCCAACATCCC +
Preference number: 4 (lower is better)
Translates to: GKCPESHPGPLIPCVKASFKEAH*AGGQHP
Trigger: GGGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAA...GGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp TCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTTCAAGGAGGCTCACTaGGCAGGTGGCCAACATCCC +
Preference number: 4 (lower is better)
Translates to: SSPSKRWNKHVQGGSLGRFKEAH*AGGQHP
Trigger: GGGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAA...CCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp ATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGAGAAGGCCGTGCCAATaGGCAGAGGTCGAATACAGT +
Preference number: 4 (lower is better)
Translates to: ITSRAPDSMCQGFQPLKARRPCQ*AEVEYS
Trigger: ACTGTATTCGACCTCTGCCCATTGGCACGGCCTTCT...CGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582415.2
CDS-3UTR TCA 90 bp TCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTGAGGTAAGGCGGAAGTaGAAGTCTAACTGTACTGGG +
Preference number: 4 (lower is better)
Translates to: SHPGPLIPCVKASSPSKREVRRK*KSNCTG
Trigger: CCCAGTACAGTTAGACTTTCACTTCCGCCTTACCTC...ACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000635374.1
CDS-3UTR TCA 90 bp ACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAGGTAAGGCGGAAGTaGAAGTCTAACTGTACTGGG +
Preference number: 4 (lower is better)
Translates to: TSRAPDSMCQGFQPLKALEVRRK*KSNCTG
Trigger: CCCAGTACAGTTAGACTTTCACTTCCGCCTTACCTC...CAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000635374.1
CDS-3UTR TCA 90 bp ATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGGAGGTAAGGCGGAAGTaGAAGTCTAACTGTACTGGG +
Preference number: 4 (lower is better)
Translates to: ITSRAPDSMCQGFQPLKAEVRRK*KSNCTG
Trigger: CCCAGTACAGTTAGACTTTCACTTCCGCCTTACCTC...CGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000635374.1
CDS-3UTR TCA 90 bp GATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTCACATCCCGGGCCCCTaGTTCCATGTGTCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: DGKCPESHPGPLIPCVKAHIPGP*FHVSRL
Trigger: AAGCCTTGACACATGGAATCAGGGGCCCGGGATGTG...AGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR TCA 90 bp GCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGGGCCCCCACATCCCGGGCCCCTaGTTCCATGTGTCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: ALPFIPRMESVLNHIPGPHIPGP*FHVSRL
Trigger: AAGCCTTGACACATGGAATCAGGGGCCCGGGATGTG...GGGGCCCGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR TCA 90 bp GCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGGGCCCCGGATGGAAAGTGTCCTaGATCACATCCCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: ALPFIPRMESVLNHIPGPGWKVS*ITSRAP
Trigger: AGGGGCCCGGGATGTGATTCAGGACACTTTCCATCC...GGGGCCCGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR TCA 90 bp AGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGGATGGAAAGTGTCCTaGATCACATCCCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: RLPAPQSVGISMFKEAHWGWKVS*ITSRAP
Trigger: AGGGGCCCGGGATGTGATTCAGGACACTTTCCATCC...CCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR TCA 90 bp AAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACATCCGGATGGAAAGTGTCCTaGATCACATCCCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: KRWNKHVQGGSLGRWPTSGWKVS*ITSRAP
Trigger: AGGGGCCCGGGATGTGATTCAGGACACTTTCCATCC...GGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR TCA 90 bp ATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGGTAATAGGCGTATGGTaGCCAGATCGGGTAGAGGTA +
Preference number: 4 (lower is better)
Translates to: ITSRAPDSMCQGFQPLKAVIGVW*PDRVEV
Trigger: TACCTCTACCCGATCTGGTCACCATACGCCTATTAC...CGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400999.7
ENST00000479764.7
CDS-3UTR TCA 90 bp CCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCATCTTCTCCCGGAGAGTaGTCCGGTACTTGTAACAGT +
Preference number: 4 (lower is better)
Translates to: PESHPGPLIPCVKASSPSSSPGE*SGTCNS
Trigger: ACTGTTACAAGTACCGGATCACTCTCCGGGAGAAGA...TGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400999.7
ENST00000479764.7
CDS-3UTR GCA 90 bp GCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTGGTCGTGGTTACCCTaGTCGGTGCTTTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: ALPFIPRMESVLNHIPGPWSWLP*SVLLPS
Trigger: GGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCA...GGGGCCCGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR GCA 90 bp GGCAGGTGGCCAACATCCCTTTCAAGGGGATACACCATAAAGATGACATTGTCCCTGCCTGAGCACTTGTaGCCACCCACCCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GRWPTSLSRGYTIKMTLSLPEHL*PPTLLL
Trigger: GAGGAGCAGGGTGGGTGGGCACAAGTGCTCAGGCAG...GGACAATGTCATCTTTATGGTGTATCCCCTTGAAAGGGATGTTGGCCACCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CCA 90 bp CCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGCGTCTATAAGCTGGTaGAGGACACGAAGCATCGGC +
Preference number: 4 (lower is better)
Translates to: PAPQSVGISMFKEAHWAGASISW*RTRSIG
Trigger: GCCGATGCTTCGTGTCCTCCACCAGCTTATAGACGC...ACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635322.1
CDS-3UTR CCA 90 bp TCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAAATCGCGTCTATAAGCTaGTGGAGGACACGAAGCATC +
Preference number: 4 (lower is better)
Translates to: SRAPDSMCQGFQPLKALEIASIS*WRTRSI
Trigger: GATGCTTCGTGTCCTCCACCAGCTTATAGACGCGAT...TTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321531.10
ENST00000635322.1
CDS-3UTR CCA 90 bp CCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAATCGCGTCTATAAGCTaGTGGAGGACACGAAGCATC +
Preference number: 4 (lower is better)
Translates to: PESHPGPLIPCVKASSPSIASIS*WRTRSI
Trigger: GATGCTTCGTGTCCTCCACCAGCTTATAGACGCGAT...TGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321531.10
ENST00000635322.1
CDS-3UTR CCA 90 bp ATTGCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGGGCATCGTGGAGCGCTGGTaGAAGGTACCGCTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: IALPFIPRMESVLNHIPGIVERW*KVPLAG
Trigger: CCCGGCCAGCGGTACCTTCCACCAGCGCTCCACGAT...GCCCGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321531.10
ENST00000635322.1
CDS-3UTR CCA 90 bp GGCAGGTGGCCAACATCCCTTTCAAGGGGATACACCATAAAGATGACATTGTCCGTCATCGTGGAGCGCTaGTGGAAGGTACCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GRWPTSLSRGYTIKMTLSVIVER*WKVPLA
Trigger: GGCCAGCGGTACCTTCCACCAGCGCTCCACGATGAC...GGACAATGTCATCTTTATGGTGTATCCCCTTGAAAGGGATGTTGGCCACCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635322.1
CDS-3UTR CCA 90 bp GATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTAGGCAGGAACGGGGCTaGAGTGTCAAGTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: DGKCPESHPGPLIPCVKARQERG*SVKSSS
Trigger: AGAGGAGGACTTGACACTCCAGCCCCGTTCCTGCCT...AGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
CDS-3UTR CCA 90 bp ATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTCTTTAAGCTGGTCGTaGTTACCCTGCTCGGTGCTT +
Preference number: 4 (lower is better)
Translates to: ITSRAPDSMCQGFQPLKASLSWS*LPCSVL
Trigger: AAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGA...CGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp GGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGAACTGTACTGGGTCCTaGTGGAGCAGGGGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: GPLIPCVKASSPSKRWNKNCTGS*WSRGSV
Trigger: TACTGACCCCCTGCTCCACCAGGACCCAGTACAGTT...CTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000635374.1
CDS-3UTR CCA 90 bp GGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAACTGTACTGGGTCCTaGTGGAGCAGGGGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: GKCPESHPGPLIPCVKASNCTGS*WSRGSV
Trigger: TACTGACCCCCTGCTCCACCAGGACCCAGTACAGTT...GGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000635374.1
CDS-3UTR CCA 90 bp GATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTGAGGGCAGGGTGATCTaGTCTGACCACCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: DGKCPESHPGPLIPCVKAEGRVI*SDHLKA
Trigger: GGCTTTGAGGTGGTCAGACCAGATCACCCTGCCCTC...AGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp GATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTGGCTCACTGGGCAGGTaGCCAACATCCCTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: DGKCPESHPGPLIPCVKAGSLGR*PTSLSR
Trigger: CCTTGAAAGGGATGTTGGCCACCTGCCCAGTGAGCC...AGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp GCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGGGCCCCGGCTCACTGGGCAGGTaGCCAACATCCCTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: ALPFIPRMESVLNHIPGPGSLGR*PTSLSR
Trigger: CCTTGAAAGGGATGTTGGCCACCTGCCCAGTGAGCC...GGGGCCCGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp AAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACATCCTTCAAGGAGGCTCACTaGGCAGGTGGCCAACATCCC +
Preference number: 4 (lower is better)
Translates to: KRWNKHVQGGSLGRWPTSFKEAH*AGGQHP
Trigger: GGGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAA...GGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp GATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTTCAAGGAGGCTCACTaGGCAGGTGGCCAACATCCC +
Preference number: 4 (lower is better)
Translates to: DGKCPESHPGPLIPCVKAFKEAH*AGGQHP
Trigger: GGGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAA...AGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp TCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTGTGGGCACTATGACATaGATAAGGGGTCAGCCCTTA +
Preference number: 4 (lower is better)
Translates to: SHPGPLIPCVKASSPSKRVGTMT*IRGQPL
Trigger: TAAGGGCTGACCCCTTATCCATGTCATAGTGCCCAC...ACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR TCA 90 bp GATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTCAGGGTGATCTGGTCTaGCCACCTCAAAGCCCATGT +
Preference number: 4 (lower is better)
Translates to: DGKCPESHPGPLIPCVKAQGDLV*PPQSPC
Trigger: ACATGGGCTTTGAGGTGGTCAGACCAGATCACCCTG...AGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR TCA 90 bp CCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAGGAGTTTCTGTCAACTaGGAGGAAAAAGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PESHPGPLIPCVKASSPSGVSVN*EEKGCR
Trigger: TCTGCAGCCTTTTTCCTCTCAGTTGACAGAAACTCC...TGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR GCA 90 bp GGCAGGTGGCCAACATCCCTTTCAAGGGGATACACCATAAAGATGACATTGTCCGGTTACCCTGCTCGGTaGTTTTGCCCTCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GRWPTSLSRGYTIKMTLSGYPAR*FCPPGG
Trigger: GCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACC...GGACAATGTCATCTTTATGGTGTATCCCCTTGAAAGGGATGTTGGCCACCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR GCA 90 bp CCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGTTACCCTGCTCGGTaGTTTTGCCCTCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PCVKASSPSKRWNKHVQGGYPAR*FCPPGG
Trigger: GCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACC...TCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR GCA 90 bp AAGGGGATACACCATAAAGATGACATTGTCCAAGGGAGGGAGGGCAGGGTGATCTGGTCGTGGTTACCCTaGTCGGTGCTTTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: KGIHHKDDIVQGREGRVIWSWLP*SVLLPS
Trigger: GGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCA...GATCACCCTGCCCTCCCTCCCTTGGACAATGTCATCTTTATGGTGTATCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR GCA 90 bp TCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATCAAACTTTCCCGGTTaGCTTGATCCAAGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: SRAPDSMCQGFQPLKALESNFPG*LDPRPD
Trigger: ATCAGGCCTTGGATCAAGGCAACCGGGAAAGTTTGA...TTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000582415.2
CDS-3UTR GCA 90 bp GAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCACGTACTCCAGGGTTaGAGTCAAACTTTCCCGGTT +
Preference number: 4 (lower is better)
Translates to: ESHPGPLIPCVKASSPSKHVLQG*SQTFPV
Trigger: AACCGGGAAAGTTTGACTGCAACCCTGGAGTACGTG...CTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000582415.2
CDS-3UTR GCA 90 bp TCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTCCTGAGCAGGAAACGTaGCTGGTGTTTTCAAGAAAC +
Preference number: 4 (lower is better)
Translates to: SHPGPLIPCVKASSPSKRPEQET*LVFSRN
Trigger: GTTTCTTGAAAACACCAGGCACGTTTCCTGCTCAGG...ACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CCA 90 bp ACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGTACAGTTCTTTAAGCTaGTCGTGGTTACCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: TSRAPDSMCQGFQPLKALYSSLS*SWLPCS
Trigger: CGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTA...CAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp ATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGATCCAAGGCCTGATATaGGATATCCAGGAAGAGTCG +
Preference number: 4 (lower is better)
Translates to: ITSRAPDSMCQGFQPLKAIQGLI*DIQEES
Trigger: CGACTCTTCCTGGATATCCCATATCAGGCCTTGGAT...CGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000582415.2
ENST00000635374.1
CDS-3UTR CCA 90 bp CCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAATCCAAGGCCTGATATaGGATATCCAGGAAGAGTCG +
Preference number: 4 (lower is better)
Translates to: PESHPGPLIPCVKASSPSIQGLI*DIQEES
Trigger: CGACTCTTCCTGGATATCCCATATCAGGCCTTGGAT...TGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000582415.2
ENST00000635374.1
CDS-3UTR CCA 90 bp CCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGAGGGCAGGGTGATCTaGTCTGACCACCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: PLIPCVKASSPSKRWNKHEGRVI*SDHLKA
Trigger: GGCTTTGAGGTGGTCAGACCAGATCACCCTGCCCTC...ATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp CAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACATGAGGGCAGGGTGATCTaGTCTGACCACCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: QSVGISMFKEAHWAGGQHEGRVI*SDHLKA
Trigger: GGCTTTGAGGTGGTCAGACCAGATCACCCTGCCCTC...ATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp TCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACGGGTCAGGCTCCTCCTaGAGCTGGCAGAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SRLPAPQSVGISMFKEAHGSGSS*SWQSFP
Trigger: TGGAAAACTCTGCCAGCTCCAGGAGGAGCCTGACCC...GTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CCA 90 bp CAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACATCGCTTCCTCTCAGGCTaGTCCGGTTTGGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: QSVGISMFKEAHWAGGQHRFLSG*SGLASA
Trigger: AGCTGATGCCAAACCGGACCAGCCTGAGAGGAAGCG...ATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635322.1
CDS-3UTR TCA 90 bp CCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATCAGGGTGATCTGGTCTaGCCACCTCAAAGCCCATGT +
Preference number: 4 (lower is better)
Translates to: PLIPCVKASSPSKRWNKHQGDLV*PPQSPC
Trigger: ACATGGGCTTTGAGGTGGTCAGACCAGATCACCCTG...ATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR GCA 90 bp GGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGGGCGTCCGTCACCTCTaGCAAAAAGCAAAAATAGGC +
Preference number: 4 (lower is better)
Translates to: GPLIPCVKASSPSKRWNKGVRHL*QKAKIG
Trigger: GCCTATTTTTGCTTTTTGGCAGAGGTGACGGACGCC...CTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR GCA 90 bp CATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGTTGGCCAAAAGCCCTaGCTGAGCACTTGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: HVSRLPAPQSVGISMFKEVGQKP*LSTCAH
Trigger: GTGGGCACAAGTGCTCAGGCAGGGCTTTTGGCCAAC...CTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR GCA 90 bp CAAGGGAGGGAGGGCAGGGTGATCTGGTCTGACCACCTCAAAGCCCATGTAGCTCACGTACTCCAGGGTTaGAGTCAAACGAATACAGTT +
Preference number: 4 (lower is better)
Translates to: QGREGRVIWSDHLKAHVAHVLQG*SQTNTV
Trigger: AACTGTATTCGTTTGACTGCAACCCTGGAGTACGTG...AGCTACATGGGCTTTGAGGTGGTCAGACCAGATCACCCTGCCCTCCCTCCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479764.7
ENST00000635322.1
CDS-3UTR CCA 90 bp CCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGCGTCTATAAGCTGGTaGAGGACACGAAGCATCGGC +
Preference number: 4 (lower is better)
Translates to: PLIPCVKASSPSKRWNKHASISW*RTRSIG
Trigger: GCCGATGCTTCGTGTCCTCCACCAGCTTATAGACGC...ATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321531.10
ENST00000635322.1
CDS-3UTR CCA 90 bp GGCAGGTGGCCAACATCCCTTTCAAGGGGATACACCATAAAGATGACATTGTCCAGGCAGGAACGGGGCTaGAGTGTCAAGTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GRWPTSLSRGYTIKMTLSRQERG*SVKSSS
Trigger: AGAGGAGGACTTGACACTCCAGCCCCGTTCCTGCCT...GGACAATGTCATCTTTATGGTGTATCCCCTTGAAAGGGATGTTGGCCACCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479764.7
ENST00000635322.1
CDS-3UTR CCA 90 bp GGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCTCTTTAAGCTGGTCGTaGTTACCCTGCTCGGTGCTT +
Preference number: 4 (lower is better)
Translates to: GKCPESHPGPLIPCVKASSLSWS*LPCSVL
Trigger: AAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGA...GGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp GCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCTCTTTAAGCTGGTCGTaGTTACCCTGCTCGGTGCTT +
Preference number: 4 (lower is better)
Translates to: ASSPSKRWNKHVQGGSLGSLSWS*LPCSVL
Trigger: AAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGA...GCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp GAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGTACAGTTCTTTAAGCTaGTCGTGGTTACCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: ESHPGPLIPCVKASSPSKYSSLS*SWLPCS
Trigger: CGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTA...CTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp AAGGGGATACACCATAAAGATGACATTGTCCAAGGGAGGGAGGGCAGGGTGATCAACTGTACTGGGTCCTaGTGGAGCAGGGGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: KGIHHKDDIVQGREGRVINCTGS*WSRGSV
Trigger: TACTGACCCCCTGCTCCACCAGGACCCAGTACAGTT...GATCACCCTGCCCTCCCTCCCTTGGACAATGTCATCTTTATGGTGTATCCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635374.1
CDS-3UTR CCA 90 bp ACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGAGCCCCTCAAAGCGTTaGAATAAGCATGTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: TSRAPDSMCQGFQPLKALSPSKR*NKHVQG
Trigger: TCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCT...CAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp TCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAAAGCCCCTCAAAGCGTTaGAATAAGCATGTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: SRAPDSMCQGFQPLKALESPSKR*NKHVQG
Trigger: TCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCT...TTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp TCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTAGCCCCTCAAAGCGTTaGAATAAGCATGTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: SHPGPLIPCVKASSPSKRSPSKR*NKHVQG
Trigger: TCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCT...ACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp AGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACATCCCTTCAGTGCCTCCCTGTaGCAAAGTGAAGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: SVGISMFKEAHWAGGQHPFSASL*QSEVHR
Trigger: CCTGTGAACTTCACTTTGCCACAGGGAGGCACTGAA...GGGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CCA 90 bp CCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGGCTCCTCCTGGAGCTaGCAGAGTTTTCCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: PLIPCVKASSPSKRWNKHGSSWS*QSFPRD
Trigger: ATCCCTTGGAAAACTCTGCCAGCTCCAGGAGGAGCC...ATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CCA 90 bp AGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACATCCCAGGAGGAAGGAGGACTaGTCAGTATGTTTAAGGGCC +
Preference number: 4 (lower is better)
Translates to: SVGISMFKEAHWAGGQHPRRKED*SVCLRA
Trigger: GGCCCTTAAACATACTGACCAGTCCTCCTTCCTCCT...GGGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CCA 90 bp TCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTAGCAAAATTTGGTTCTaGGACTGCCACTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: SHPGPLIPCVKASSPSKRSKIWF*DCHFET
Trigger: GGTCTCAAAGTGGCAGTCCCAGAACCAAATTTTGCT...ACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR TCA 90 bp AAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACATCCGAGGTAAGGCGGAAGTaGAAGTCTAACTGTACTGGG +
Preference number: 4 (lower is better)
Translates to: KRWNKHVQGGSLGRWPTSEVRRK*KSNCTG
Trigger: CCCAGTACAGTTAGACTTTCACTTCCGCCTTACCTC...GGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635374.1
CDS-3UTR TCA 90 bp ATTGCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGGGCGGATGGAAAGTGTCCTaGATCACATCCCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: IALPFIPRMESVLNHIPGGWKVS*ITSRAP
Trigger: AGGGGCCCGGGATGTGATTCAGGACACTTTCCATCC...GCCCGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR TCA 90 bp ATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGGAGATGATACATCAGTaGACAAAACAAATCCCTGCC +
Preference number: 4 (lower is better)
Translates to: ITSRAPDSMCQGFQPLKAEMIHQ*TKQIPA
Trigger: GGCAGGGATTTGTTTTGTTCACTGATGTATCATCTC...CGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR GCA 90 bp GGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCTCAAACTTTCCCGGTTaGCTTGATCCAAGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: GKCPESHPGPLIPCVKASSNFPG*LDPRPD
Trigger: ATCAGGCCTTGGATCAAGGCAACCGGGAAAGTTTGA...GGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000582415.2
CDS-3UTR GCA 90 bp GCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGGGCCCCCACGTACTCCAGGGTTaGAGTCAAACTTTCCCGGTT +
Preference number: 4 (lower is better)
Translates to: ALPFIPRMESVLNHIPGPHVLQG*SQTFPV
Trigger: AACCGGGAAAGTTTGACTGCAACCCTGGAGTACGTG...GGGGCCCGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000582415.2
CDS-3UTR GCA 90 bp CATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGGCACCTTTCCCGGTTaGCTTGATCCAAGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: HVSRLPAPQSVGISMFKEGTFPG*LDPRPD
Trigger: ATCAGGCCTTGGATCAAGGCAACCGGGAAAGGTGCC...CTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635374.1
CDS-3UTR CCA 90 bp GATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCTTTAAGCTGGTCGTaGTTACCCTGCTCGGTGCTT +
Preference number: 4 (lower is better)
Translates to: DGKCPESHPGPLIPCVKASLSWS*LPCSVL
Trigger: AAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGA...AGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp TCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTACAGTTCTTTAAGCTaGTCGTGGTTACCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SSPSKRWNKHVQGGSLGRYSSLS*SWLPCS
Trigger: CGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTA...CCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp CTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTAGAAGGCCGTGCCAATaGGCAGAGGTCTGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: LIPCVKASSPSKRWNKHVRRPCQ*AEVWEV
Trigger: TACCTCCCAGACCTCTGCCCATTGGCACGGCCTTCT...AACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635374.1
CDS-3UTR CCA 90 bp GGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGATCCAAGGCCTGATATaGGATATCCAGGAAGAGTCG +
Preference number: 4 (lower is better)
Translates to: GPLIPCVKASSPSKRWNKIQGLI*DIQEES
Trigger: CGACTCTTCCTGGATATCCCATATCAGGCCTTGGAT...CTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000582415.2
ENST00000635374.1
CDS-3UTR CCA 90 bp ATTGCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGGGCGGCTCACTGGGCAGGTaGCCAACATCCCTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: IALPFIPRMESVLNHIPGGSLGR*PTSLSR
Trigger: CCTTGAAAGGGATGTTGGCCACCTGCCCAGTGAGCC...GCCCGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp GAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGAGCCCCTCAAAGCGTTaGAATAAGCATGTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: ESHPGPLIPCVKASSPSKSPSKR*NKHVQG
Trigger: TCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCT...CTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp GCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCACAAGGAGGCCACTGTaGGTGGAGCAGTGTAAATTA +
Preference number: 4 (lower is better)
Translates to: ASSPSKRWNKHVQGGSLGTRRPL*VEQCKL
Trigger: TAATTTACACTGCTCCACCCACAGTGGCCTCCTTGT...GCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CCA 90 bp CCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAATGGAAATTAGTGGAGTaGCAGGGTAGGGCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: PQSVGISMFKEAHWAGGQWKLVE*QGRAVA
Trigger: TGCTACAGCCCTACCCTGCCACTCCACTAATTTCCA...TTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CCA 90 bp AGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACATCCCGGCCTAGACAGCTTATaGAAATTAGTGGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SVGISMFKEAHWAGGQHPGLDSL*KLVEWQ
Trigger: CTGCCACTCCACTAATTTCCATAAGCTGTCTAGGCC...GGGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR TCA 90 bp TCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAAGTGTTTTTCCCCTCTTaGTATAAGAAAGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: SRAPDSMCQGFQPLKALEVFFPS*YKKGSR
Trigger: TCTACTCCCTTTCTTATATCAAGAGGGGAAAAACAC...TTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000400999.7
ENST00000479764.7
CDS-3UTR TCA 90 bp CAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACATTCTTCTCCCGGAGAGTaGTCCGGTACTTGTAACAGT +
Preference number: 4 (lower is better)
Translates to: QSVGISMFKEAHWAGGQHSSPGE*SGTCNS
Trigger: ACTGTTACAAGTACCGGATCACTCTCCGGGAGAAGA...ATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR TCA 90 bp CAGGTGGCCAACATCCCTTTCAAGGGGATACACCATAAAGATGACATTGTCCAACCAGTGCAAAAGCCCTaGGCAGGAAACGTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: QVANIPFKGIHHKDDIVQPVQKP*AGNVPG
Trigger: ACCAGGCACGTTTCCTGCTCAGGGCTTTTGCACTGG...TTGGACAATGTCATCTTTATGGTGTATCCCCTTGAAAGGGATGTTGGCCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR GCA 90 bp GATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCAAACTTTCCCGGTTaGCTTGATCCAAGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: DGKCPESHPGPLIPCVKASNFPG*LDPRPD
Trigger: ATCAGGCCTTGGATCAAGGCAACCGGGAAAGTTTGA...AGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000582415.2
CDS-3UTR GCA 90 bp CCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATCACGTACTCCAGGGTTaGAGTCAAACTTTCCCGGTT +
Preference number: 4 (lower is better)
Translates to: PLIPCVKASSPSKRWNKHHVLQG*SQTFPV
Trigger: AACCGGGAAAGTTTGACTGCAACCCTGGAGTACGTG...ATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000582415.2
CDS-3UTR GCA 90 bp CCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATCTTTTAGGGGACTATTaGAGTAATCCAGGAGAAAGT +
Preference number: 4 (lower is better)
Translates to: PGPLIPCVKASSPSKRWNLLGDY*SNPGES
Trigger: ACTTTCTCCTGGATTACTGCAATAGTCCCCTAAAAG...ATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR GCA 90 bp GCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGGGCCCCAGGACTCCACTCTGCTaGTTATCTACCCTAATCCCT +
Preference number: 4 (lower is better)
Translates to: ALPFIPRMESVLNHIPGPRTPLC*LSTLIP
Trigger: AGGGATTAGGGTAGATAAGCAGCAGAGTGGAGTCCT...GGGGCCCGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CCA 90 bp CCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATTCTTTAAGCTGGTCGTaGTTACCCTGCTCGGTGCTT +
Preference number: 4 (lower is better)
Translates to: PLIPCVKASSPSKRWNKHSLSWS*LPCSVL
Trigger: AAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGA...ATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp GATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTACAGTTCTTTAAGCTaGTCGTGGTTACCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: DGKCPESHPGPLIPCVKAYSSLS*SWLPCS
Trigger: CGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTA...AGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp GCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTACAGTTCTTTAAGCTaGTCGTGGTTACCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: ALPFIPRMESVLNHIPGPYSSLS*SWLPCS
Trigger: CGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTA...GGGGCCCGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp CAGGTGGCCAACATCCCTTTCAAGGGGATACACCATAAAGATGACATTGTCCAAGGCTCACTGGGCAGGTaGCCAACATCCCTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: QVANIPFKGIHHKDDIVQGSLGR*PTSLSR
Trigger: CCTTGAAAGGGATGTTGGCCACCTGCCCAGTGAGCC...TTGGACAATGTCATCTTTATGGTGTATCCCCTTGAAAGGGATGTTGGCCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp CCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATTTCAGTGCCTCCCTGTaGCAAAGTGAAGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: PLIPCVKASSPSKRWNKHFSASL*QSEVHR
Trigger: CCTGTGAACTTCACTTTGCCACAGGGAGGCACTGAA...ATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400999.7
ENST00000479764.7
CDS-3UTR CCA 90 bp GATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTGGAGGTGGTGACAAGTaGCTGGATTCTGGAAATACA +
Preference number: 4 (lower is better)
Translates to: DGKCPESHPGPLIPCVKAGGGDK*LDSGNT
Trigger: TGTATTTCCAGAATCCAGCCACTTGTCACCACCTCC...AGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CCA 90 bp CCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGACTTCTGTACTGGTTaGCCAAAAGCCCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PCVKASSPSKRWNKHVQGDFCTG*PKALPE
Trigger: CTCAGGCAGGGCTTTTGGCCAACCAGTACAGAAGTC...TCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CCA 90 bp GGCAGGTGGCCAACATCCCTTTCAAGGGGATACACCATAAAGATGACATTGTCCCAGGCTGGTCCGGTTTaGCATCAGCTTTTTCTAGCC +
Preference number: 4 (lower is better)
Translates to: GRWPTSLSRGYTIKMTLSQAGPV*HQLFLA
Trigger: GGCTAGAAAAAGCTGATGCCAAACCGGACCAGCCTG...GGACAATGTCATCTTTATGGTGTATCCCCTTGAAAGGGATGTTGGCCACCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635322.1
CDS-3UTR TCA 90 bp CCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATGGTGGAAGAATGACATaGTCTGACTTATGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: PGPLIPCVKASSPSKRWNGGRMT*SDLCFK
Trigger: TTTAAAGCATAAGTCAGATCATGTCATTCTTCCACC...ATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR TCA 90 bp CAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACATCTGGGACTGCCACTTTaGGACCTCTGCATATTTATC +
Preference number: 4 (lower is better)
Translates to: QSVGISMFKEAHWAGGQHLGLPL*DLCIFI
Trigger: GATAAATATGCAGAGGTCTCAAAGTGGCAGTCCCAG...ATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR GCA 90 bp CAAGGGAGGGAGGGCAGGGTGATCTGGTCTGACCACCTCAAAGCCCATGTAGCTTCTTTCCATAATCTCTaGCAAATGGACCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: QGREGRVIWSDHLKAHVASFHNL*QMDLLS
Trigger: TGAAAGAAGGTCCATTTGGCAGAGATTATGGAAAGA...AGCTACATGGGCTTTGAGGTGGTCAGACCAGATCACCCTGCCCTCCCTCCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CCA 90 bp AAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACATCCAGCCCCTCAAAGCGTTaGAATAAGCATGTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: KRWNKHVQGGSLGRWPTSSPSKR*NKHVQG
Trigger: TCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCT...GGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp CAAGGGAGGGAGGGCAGGGTGATCTGGTCTGACCACCTCAAAGCCCATGTAGCTTCATTGGCTTATAAATaGTATTGTAAGCCACGAGAC +
Preference number: 4 (lower is better)
Translates to: QGREGRVIWSDHLKAHVASLAYK*YCKPRD
Trigger: GTCTCGTGGCTTACAATACCATTTATAAGCCAATGA...AGCTACATGGGCTTTGAGGTGGTCAGACCAGATCACCCTGCCCTCCCTCCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CCA 90 bp GCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGGGCCCCCAAGTGGCTGGATTCTaGAAATACAAGTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ALPFIPRMESVLNHIPGPQVAGF*KYKCSL
Trigger: CAAGGAGCACTTGTATTTCCAGAATCCAGCCACTTG...GGGGCCCGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CCA 90 bp AGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGGTGACCTGATTAGTTaGTTCCCAGTTCATACCAGT +
Preference number: 4 (lower is better)
Translates to: RLPAPQSVGISMFKEAHWGDLIS*FPVHTS
Trigger: ACTGGTATGAACTGGGAACCAACTAATCAGGTCACC...CCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR GCA 90 bp ATTGCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGGGCCACGTACTCCAGGGTTaGAGTCAAACTTTCCCGGTT +
Preference number: 4 (lower is better)
Translates to: IALPFIPRMESVLNHIPGHVLQG*SQTFPV
Trigger: AACCGGGAAAGTTTGACTGCAACCCTGGAGTACGTG...GCCCGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000582415.2
CDS-3UTR GCA 90 bp TCCCTTTCAAGGGGATACACCATAAAGATGACATTGTCCAAGGGAGGGAGGGCACTCAGGACTCCACTCTaGTGCTTATCTACCCTAATC +
Preference number: 4 (lower is better)
Translates to: SLSRGYTIKMTLSKGGRALRTPL*CLSTLI
Trigger: GATTAGGGTAGATAAGCAGCAGAGTGGAGTCCTGAG...TGCCCTCCCTCCCTTGGACAATGTCATCTTTATGGTGTATCCCCTTGAAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR GCA 90 bp CAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACATCACGTACTCCAGGGTTaGAGTCAAACGAATACAGTT +
Preference number: 4 (lower is better)
Translates to: QSVGISMFKEAHWAGGQHHVLQG*SQTNTV
Trigger: AACTGTATTCGTTTGACTGCAACCCTGGAGTACGTG...ATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479764.7
ENST00000635322.1
CDS-3UTR CCA 90 bp CTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTTCTTTAAGCTGGTCGTaGTTACCCTGCTCGGTGCTT +
Preference number: 4 (lower is better)
Translates to: LIPCVKASSPSKRWNKHVSLSWS*LPCSVL
Trigger: AAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGA...AACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp GGCAGGTGGCCAACATCCCTTTCAAGGGGATACACCATAAAGATGACATTGTCCTACAGTTCTTTAAGCTaGTCGTGGTTACCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: GRWPTSLSRGYTIKMTLSYSSLS*SWLPCS
Trigger: CGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTA...GGACAATGTCATCTTTATGGTGTATCCCCTTGAAAGGGATGTTGGCCACCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp AAGGGGATACACCATAAAGATGACATTGTCCAAGGGAGGGAGGGCAGGGTGATCAGCCCCTCAAAGCGTTaGAATAAGCATGTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: KGIHHKDDIVQGREGRVISPSKR*NKHVQG
Trigger: TCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCT...GATCACCCTGCCCTCCCTCCCTTGGACAATGTCATCTTTATGGTGTATCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CCA 90 bp CTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTAAGTTCACAGGTGGGTaGCAGAGGTTTAGGCAACCT +
Preference number: 4 (lower is better)
Translates to: LIPCVKASSPSKRWNKHVKFTGG*QRFRQP
Trigger: AGGTTGCCTAAACCTCTGCCACCCACCTGTGAACTT...AACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR TCA 90 bp TTGATGATTGCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCTCCCTGTGGCAAAGTaGAGTTCACAGGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LMIALPFIPRMESVLNHILPVAK*SSQVGG
Trigger: GCCACCCACCTGTGAACTTCACTTTGCCACAGGGAG...GATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGCAATCATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400999.7
CDS-3UTR TCA 90 bp ATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGTAATAGGCGTATGGTaGCCAGATCGGGTAGAGGTA +
Preference number: 4 (lower is better)
Translates to: IPCVKASSPSKRWNKHVQVIGVW*PDRVEV
Trigger: TACCTCTACCCGATCTGGTCACCATACGCCTATTAC...TTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR TCA 90 bp AGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACATCCCTTTCCTGATGGAGTATaGGAGAAAAGAGTTAGAATG +
Preference number: 4 (lower is better)
Translates to: SVGISMFKEAHWAGGQHPFPDGV*EKRVRM
Trigger: CATTCTAACTCTTTTCTCTCATACTCCATCAGGAAA...GGGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR TCA 90 bp CCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAATCTAGGTGCTTGAGATaGTACATCAGTGAACAAAAC +
Preference number: 4 (lower is better)
Translates to: PQSVGISMFKEAHWAGGQSRCLR*YISEQN
Trigger: GTTTTGTTCACTGATGTATCATCTCAAGCACCTAGA...TTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR TCA 90 bp GCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTGGTGCTGTATCGTATaGTTTTTGAACAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: ALPFIPRMESVLNHIPGPWCCIV*FLNRNW
Trigger: CCAGTTTCTGTTCAAAAATCATACGATACAGCACCA...GGGGCCCGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR GCA 90 bp TTGATGATTGCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCTGGTCGTGGTTACCCTaGTCGGTGCTTTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LMIALPFIPRMESVLNHIWSWLP*SVLLPS
Trigger: GGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCA...GATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGCAATCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400999.7
ENST00000635374.1
CDS-3UTR CCA 90 bp ATTGCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGGGCATCCAAGGCCTGATATaGGATATCCAGGAAGAGTCG +
Preference number: 4 (lower is better)
Translates to: IALPFIPRMESVLNHIPGIQGLI*DIQEES
Trigger: CGACTCTTCCTGGATATCCCATATCAGGCCTTGGAT...GCCCGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000582415.2
ENST00000635374.1
CDS-3UTR CCA 90 bp CTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTATCCAAGGCCTGATATaGGATATCCAGGAAGAGTCG +
Preference number: 4 (lower is better)
Translates to: LIPCVKASSPSKRWNKHVIQGLI*DIQEES
Trigger: CGACTCTTCCTGGATATCCCATATCAGGCCTTGGAT...AACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635374.1
CDS-3UTR CCA 90 bp TTGATGATTGCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCGAGGGCAGGGTGATCTaGTCTGACCACCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: LMIALPFIPRMESVLNHIEGRVI*SDHLKA
Trigger: GGCTTTGAGGTGGTCAGACCAGATCACCCTGCCCTC...GATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGCAATCATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400999.7
ENST00000635374.1
CDS-3UTR TCA 90 bp GATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTCCTCTTCCTTATAAGTaGTGCTTTTATAACAACGAG +
Preference number: 4 (lower is better)
Translates to: DGKCPESHPGPLIPCVKAPLPYK*CFYNNE
Trigger: CTCGTTGTTATAAAAGCATCACTTATAAGGAAGAGG...AGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400999.7
ENST00000479764.7
CDS-3UTR TCA 90 bp CCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAATTTCATGTAACTTATTaGTGTCCTACTGAGTGCACA +
Preference number: 4 (lower is better)
Translates to: PQSVGISMFKEAHWAGGQFHVTY*CPTECT
Trigger: TGTGCACTCAGTAGGACATCAATAAGTTACATGAAA...TTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR TCA 90 bp CAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACATACTATTCTAGGTGCTTaGGATGATACATCAGTGAAC +
Preference number: 4 (lower is better)
Translates to: QSVGISMFKEAHWAGGQHTILGA*DDTSVN
Trigger: GTTCACTGATGTATCATCTCAAGCACCTAGAATAGT...ATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR TCA 90 bp CATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGTGTTTTTCCCCTCTTaGTATAAGAAAGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: HVSRLPAPQSVGISMFKEVFFPS*YKKGSR
Trigger: TCTACTCCCTTTCTTATATCAAGAGGGGAAAAACAC...CTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR TCA 90 bp CAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACATCCTCTTCCTTATAAGTaGTGCTTTTATAACAACGAG +
Preference number: 4 (lower is better)
Translates to: QSVGISMFKEAHWAGGQHPLPYK*CFYNNE
Trigger: CTCGTTGTTATAAAAGCATCACTTATAAGGAAGAGG...ATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CCA 90 bp CCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAAAACTTATCCGACAGTTaGGTAAAATCATCTAACACA +
Preference number: 4 (lower is better)
Translates to: PQSVGISMFKEAHWAGGQNLSDS*VKSSNT
Trigger: TGTGTTAGATGATTTTACCCAACTGTCGGATAAGTT...TTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CCA 90 bp AAGGGGATACACCATAAAGATGACATTGTCCAAGGGAGGGAGGGCAGGGTGATCATTGTAAGCAAAATTTaGTTCTGGGACTGCCACTTT +
Preference number: 4 (lower is better)
Translates to: KGIHHKDDIVQGREGRVIIVSKI*FWDCHF
Trigger: AAAGTGGCAGTCCCAGAACCAAATTTTGCTTACAAT...GATCACCCTGCCCTCCCTCCCTTGGACAATGTCATCTTTATGGTGTATCCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CCA 90 bp TTGATGATTGCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCTCTTTAAGCTGGTCGTaGTTACCCTGCTCGGTGCTT +
Preference number: 4 (lower is better)
Translates to: LMIALPFIPRMESVLNHISLSWS*LPCSVL
Trigger: AAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGA...GATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGCAATCATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400999.7
ENST00000635374.1
CDS-3UTR CCA 90 bp ATGATTGCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGAGCCCCTCAAAGCGTTaGAATAAGCATGTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: MIALPFIPRMESVLNHIPSPSKR*NKHVQG
Trigger: TCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCT...CGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGCAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400999.7
ENST00000479764.7
ENST00000635374.1
CDS-3UTR CCA 90 bp CCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAATAATCTCTGCCAAATaGACCTTCTTTCATCCAGTT +
Preference number: 4 (lower is better)
Translates to: PCVKASSPSKRWNKHVQGIISAK*TFFHPV
Trigger: AACTGGATGAAAGAAGGTCCATTTGGCAGAGATTAT...TCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR TCA 90 bp CAGGTGGCCAACATCCCTTTCAAGGGGATACACCATAAAGATGACATTGTCCAATTATTGATGTCCTACTaGGTGCACATCACTTTCACA +
Preference number: 4 (lower is better)
Translates to: QVANIPFKGIHHKDDIVQLLMSY*VHITFT
Trigger: TGTGAAAGTGATGTGCACTCAGTAGGACATCAATAA...TTGGACAATGTCATCTTTATGGTGTATCCCCTTGAAAGGGATGTTGGCCACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CCA 90 bp TTGATGATTGCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCTACAGTTCTTTAAGCTaGTCGTGGTTACCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: LMIALPFIPRMESVLNHIYSSLS*SWLPCS
Trigger: CGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTA...GATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGCAATCATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400999.7
ENST00000635374.1
CDS CCA 90 bp CGTCGCTTTCCTGGCCGCCAGGGCACGGTCATCGTGGAGCGCTGGTaGAAGGTACCGCTGGCCGGGGAGGGCCGGAAGCCGCGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: RRFPGRQGTVIVERW*KVPLAGEGRKPRLH
Trigger: GTGCAGGCGCGGCTTCCGGCCCTCCCCGGCCAGCGGTACCTTCCACCAGCGCTCCACGATGACCGTGCCCTGGCGGCCAGGAAAGCGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321531.10
ENST00000635322.1
CDS CCA 90 bp AGTCGGTGGAGAGTAAGGCCCGGGCCGAGGCGCTTCCTCTCAGGCTaGTCCGGTTTGGCATCAGCTTTTTCTAGCCCGTCCCCCTCAACT +
Preference number: 5 (lower is better)
Translates to: SRWRVRPGPRRFLSG*SGLASAFSSPSPST
Trigger: AGTTGAGGGGGACGGGCTAGAAAAAGCTGATGCCAAACCGGACCAGCCTGAGAGGAAGCGCCTCGGCCCGGGCCTTACTCTCCACCGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635322.1
CDS CCA 90 bp TCTTTAAGCTGGTCGTGGTTACCCTGCTCGGTGCTTTTGCCCTCCTaGAGGCCTACTAGGGACTCGGAGCACTGGAGGCAGGAACGGGGC +
Preference number: 5 (lower is better)
Translates to: SLSWSWLPCSVLLPS*RPTRDSEHWRQERG
Trigger: GCCCCGTTCCTGCCTCCAGTGCTCCGAGTCCCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CAA 90 bp CCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATCCCTGCTCGGTGCTTTaGCCCTCCTGGAGGCCTACT +
Preference number: 5 (lower is better)
Translates to: PGPLIPCVKASSPSKRWNPCSVL*PSWRPT
Trigger: AGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGG...ATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS CCA 90 bp TCGGTGCTTTTGCCCTCCTGGAGGCCTACTAGGGACTCGGAGCACTaGAGGCAGGAACGGGGCTGGAGTGTCAAGTCCTCCTCTTCCTTA +
Preference number: 5 (lower is better)
Translates to: SVLLPSWRPTRDSEH*RQERGWSVKSSSSL
Trigger: TAAGGAAGAGGAGGACTTGACACTCCAGCCCCGTTCCTGCCTCCAGTGCTCCGAGTCCCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
CDS CCA 90 bp CGGTGCTTTTGCCCTCCTGGAGGCCTACTAGGGACTCAGGAGCACTaGAGGCAGGAACGGGGCTGGAGTGTCAAGTCCTCCTCTTCCTTA +
Preference number: 5 (lower is better)
Translates to: RCFCPPGGLLGTQEH*RQERGWSVKSSSSL
Trigger: TAAGGAAGAGGAGGACTTGACACTCCAGCCCCGTTCCTGCCTCCAGTGCTCCTGAGTCCCTAGTAGGCCTCCAGGAGGGCAAAAGCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577465.1
ENST00000635179.1
CDS CCA 90 bp TCTTTAAGCTGGTCGTGGTTACCCTGCTCGGTGCTTTTGCCCTCCTaGAGGCCTACTAGGGACTCAGGAGCACTGGAGGCAGGAACGGGG +
Preference number: 5 (lower is better)
Translates to: SLSWSWLPCSVLLPS*RPTRDSGALEAGTG
Trigger: CCCCGTTCCTGCCTCCAGTGCTCCTGAGTCCCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577465.1
ENST00000635179.1
CDS CCA 90 bp CGCAGCAGGGCACCTTTCCCGGTTGCCTTGATCCAAGGCCTGATATaGGATATCCAGGAAGAGTCGACGGTCACAGAGAAGGCCGTGCCA +
Preference number: 5 (lower is better)
Translates to: RSRAPFPVALIQGLI*DIQEESTVTEKAVP
Trigger: TGGCACGGCCTTCTCTGTGACCGTCGACTCTTCCTGGATATCCCATATCAGGCCTTGGATCAAGGCAACCGGGAAAGGTGCCCTGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635374.1
CDS-3UTR CAA 90 bp GGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCCCCTGCTCGGTGCTTTaGCCCTCCTGGAGGCCTACT +
Preference number: 5 (lower is better)
Translates to: GKCPESHPGPLIPCVKASPCSVL*PSWRPT
Trigger: AGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGG...GGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CAA 90 bp AGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACATCCCCCCTGCTCGGTGCTTTaGCCCTCCTGGAGGCCTACT +
Preference number: 5 (lower is better)
Translates to: SVGISMFKEAHWAGGQHPPCSVL*PSWRPT
Trigger: AGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGG...GGGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS TCA 90 bp AGAAGGCCGTGCCAATGGGCAGAGGTCTGGGAGGTAAGGCGGAAGTaGAAGTCTAACTGTACTGGGTCCTGGTGGAGCAGGGGGTCAGTA +
Preference number: 5 (lower is better)
Translates to: RRPCQWAEVWEVRRK*KSNCTGSWWSRGSV
Trigger: TACTGACCCCCTGCTCCACCAGGACCCAGTACAGTTAGACTTTCACTTCCGCCTTACCTCCCAGACCTCTGCCCATTGGCACGGCCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000577465.1
ENST00000635374.1
CDS-3UTR CAA 90 bp CCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCACCACGTACTCCAGGGTaGCAGTCAAACTTTCCCGGT +
Preference number: 5 (lower is better)
Translates to: PESHPGPLIPCVKASSPSPRTPG*QSNFPG
Trigger: ACCGGGAAAGTTTGACTGCAACCCTGGAGTACGTGG...TGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000582415.2
CDS-3UTR CAA 90 bp CCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATACTTTCCCGGTTGCCTaGATCCAAGGCCTGATATGG +
Preference number: 5 (lower is better)
Translates to: PGPLIPCVKASSPSKRWNTFPVA*IQGLIW
Trigger: CCATATCAGGCCTTGGATCAAGGCAACCGGGAAAGT...ATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000582415.2
CDS-3UTR CAA 90 bp CCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAACTTTCCCGGTTGCCTaGATCCAAGGCCTGATATGG +
Preference number: 5 (lower is better)
Translates to: PESHPGPLIPCVKASSPSTFPVA*IQGLIW
Trigger: CCATATCAGGCCTTGGATCAAGGCAACCGGGAAAGT...TGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000582415.2
CDS-3UTR CAA 90 bp ATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGACTTTCCCGGTTGCCTaGATCCAAGGCCTGATATGG +
Preference number: 5 (lower is better)
Translates to: ITSRAPDSMCQGFQPLKATFPVA*IQGLIW
Trigger: CCATATCAGGCCTTGGATCAAGGCAACCGGGAAAGT...CGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000582415.2
CDS-3UTR CAA 90 bp CCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATTTCCAAGGTAGAGCATaGGAGGTGGTGACAAGTGGC +
Preference number: 5 (lower is better)
Translates to: PGPLIPCVKASSPSKRWNFQGRA*EVVTSG
Trigger: GCCACTTGTCACCACCTCCAATGCTCTACCTTGGAA...ATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS GCA 90 bp AAGTTCCCAGCCGAATACAGTTCTTTAAGCTGGTCGTGGTTACCCTaGTCGGTGCTTTTGCCCTCCTGGAGGCCTACTAGGGACTCGGAG +
Preference number: 5 (lower is better)
Translates to: KFPAEYSSLSWSWLP*SVLLPSWRPTRDSE
Trigger: CTCCGAGTCCCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTCGGCTGGGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000635374.1
CDS GCA 90 bp ATGGGGAGAGCCGAATACAGTTCTTTAAGCTGGTCGTGGTTACCCTaGTCGGTGCTTTTGCCCTCCTGGAGGCCTACTAGGGACTCAGGA +
Preference number: 5 (lower is better)
Translates to: MGRAEYSSLSWSWLP*SVLLPSWRPTRDSG
Trigger: TCCTGAGTCCCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTCGGCTCTCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577465.1
CDS CCA 90 bp AGCACCGTCAAGTTCCCAGCCGAATACAGTTCTTTAAGCTGGTCGTaGTTACCCTGCTCGGTGCTTTTGCCCTCCTGGAGGCCTACTAGG +
Preference number: 5 (lower is better)
Translates to: STVKFPAEYSSLSWS*LPCSVLLPSWRPTR
Trigger: CCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTCGGCTGGGAACTTGACGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000635374.1
CDS CCA 90 bp TTCAGTTCAGTGCCTCCCTGTGGCAAAGTGAAGTTCACAGGTGGGTaGCAGAGGTTTAGGCAACCTGGTGGCATTGTGACCCAGTGGGCA +
Preference number: 5 (lower is better)
Translates to: FSSVPPCGKVKFTGG*QRFRQPGGIVTQWA
Trigger: TGCCCACTGGGTCACAATGCCACCAGGTTGCCTAAACCTCTGCCACCCACCTGTGAACTTCACTTTGCCACAGGGAGGCACTGAACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS CCA 90 bp TGGGCATTGATGGGGAGAGCCGAATACAGTTCTTTAAGCTGGTCGTaGTTACCCTGCTCGGTGCTTTTGCCCTCCTGGAGGCCTACTAGG +
Preference number: 5 (lower is better)
Translates to: WALMGRAEYSSLSWS*LPCSVLLPSWRPTR
Trigger: CCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTCGGCTCTCCCCATCAATGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577465.1
CDS-3UTR CAA 90 bp GGGCAGGTGGCCAACATCCCTTTCAAGGGGATACACCATAAAGATGACATTGTCCCCTGCTCGGTGCTTTaGCCCTCCTGGAGGCCTACT +
Preference number: 5 (lower is better)
Translates to: GQVANIPFKGIHHKDDIVPCSVL*PSWRPT
Trigger: AGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGG...GACAATGTCATCTTTATGGTGTATCCCCTTGAAAGGGATGTTGGCCACCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CAA 90 bp TCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTACCATAAAGATGACATaGTCCAAGGGAGGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: SHPGPLIPCVKASSPSKRTIKMT*SKGGRA
Trigger: TGCCCTCCCTCCCTTGGACAATGTCATCTTTATGGT...ACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CAA 90 bp CAGGTGGCCAACATCCCTTTCAAGGGGATACACCATAAAGATGACATTGTCCAAGCCCTGCCTGAGCACTaGTGCCCACCCACCCTGCTC +
Preference number: 5 (lower is better)
Translates to: QVANIPFKGIHHKDDIVQALPEH*CPPTLL
Trigger: GAGCAGGGTGGGTGGGCACAAGTGCTCAGGCAGGGC...TTGGACAATGTCATCTTTATGGTGTATCCCCTTGAAAGGGATGTTGGCCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS TCA 90 bp AGTTCACAGGTGGGTGGCAGAGGTTTAGGCAACCTGGTGGCATTGTaGCCCAGTGGGCACTATGACATGGATAAGGGGTCAGCCCTTATG +
Preference number: 5 (lower is better)
Translates to: SSQVGGRGLGNLVAL*PSGHYDMDKGSALM
Trigger: CATAAGGGCTGACCCCTTATCCATGTCATAGTGCCCACTGGGTCACAATGCCACCAGGTTGCCTAAACCTCTGCCACCCACCTGTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS CCA 90 bp GGTTGCAGTCAAACTTTCCCGGTTGCCTTGATCCAAGGCCTGATATaGGATATCCAGGAAGAGTCGACGGTCACAGAGAAGGCCGTGCCA +
Preference number: 5 (lower is better)
Translates to: GCSQTFPVALIQGLI*DIQEESTVTEKAVP
Trigger: TGGCACGGCCTTCTCTGTGACCGTCGACTCTTCCTGGATATCCCATATCAGGCCTTGGATCAAGGCAACCGGGAAAGTTTGACTGCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000582415.2
CDS-3UTR CAA 90 bp GATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTCCACGTACTCCAGGGTaGCAGTCAAACTTTCCCGGT +
Preference number: 5 (lower is better)
Translates to: DGKCPESHPGPLIPCVKAPRTPG*QSNFPG
Trigger: ACCGGGAAAGTTTGACTGCAACCCTGGAGTACGTGG...AGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000582415.2
CDS-3UTR CAA 90 bp GCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGGGCCCCCCACGTACTCCAGGGTaGCAGTCAAACTTTCCCGGT +
Preference number: 5 (lower is better)
Translates to: ALPFIPRMESVLNHIPGPPRTPG*QSNFPG
Trigger: ACCGGGAAAGTTTGACTGCAACCCTGGAGTACGTGG...GGGGCCCGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000582415.2
CDS GCA 90 bp TTGCAGTCAAACGAATACAGTTCTTTAAGCTGGTCGTGGTTACCCTaGTCGGTGCTTTTGCCCTCCTGGAGGCCTACTAGGGACTCGGAG +
Preference number: 5 (lower is better)
Translates to: LQSNEYSSLSWSWLP*SVLLPSWRPTRDSE
Trigger: CTCCGAGTCCCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTCGTTTGACTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479764.7
ENST00000635322.1
CDS GCA 90 bp AGTCCACTTACCGAATACAGTTCTTTAAGCTGGTCGTGGTTACCCTaGTCGGTGCTTTTGCCCTCCTGGAGGCCTACTAGGGACTCAGGA +
Preference number: 5 (lower is better)
Translates to: SPLTEYSSLSWSWLP*SVLLPSWRPTRDSG
Trigger: TCCTGAGTCCCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTCGGTAAGTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635179.1
CDS CCA 90 bp ACTCCAGGGTTGCAGTCAAACGAATACAGTTCTTTAAGCTGGTCGTaGTTACCCTGCTCGGTGCTTTTGCCCTCCTGGAGGCCTACTAGG +
Preference number: 5 (lower is better)
Translates to: TPGLQSNEYSSLSWS*LPCSVLLPSWRPTR
Trigger: CCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTCGTTTGACTGCAACCCTGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479764.7
ENST00000635322.1
CDS CCA 90 bp CTAGCTCACAGTCCACTTACCGAATACAGTTCTTTAAGCTGGTCGTaGTTACCCTGCTCGGTGCTTTTGCCCTCCTGGAGGCCTACTAGG +
Preference number: 5 (lower is better)
Translates to: LAHSPLTEYSSLSWS*LPCSVLLPSWRPTR
Trigger: CCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTCGGTAAGTGGACTGTGAGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635179.1
CDS CCA 90 bp ACAGCACTAGCTCACAGTCCACTTACCGAATACAGTTCTTTAAGCTaGTCGTGGTTACCCTGCTCGGTGCTTTTGCCCTCCTGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: TALAHSPLTEYSSLS*SWLPCSVLLPSWRP
Trigger: AGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTCGGTAAGTGGACTGTGAGCTAGTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635179.1
CDS-3UTR CAA 90 bp TGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCACACAGAGTCCACATTaGTCTTCTCTTCCACGTACT +
Preference number: 5 (lower is better)
Translates to: CPESHPGPLIPCVKASSPTQSPH*SSLPRT
Trigger: AGTACGTGGAAGAGAAGACAAATGTGGACTCTGTGT...GGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
CDS-3UTR CAA 90 bp GGGCCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGACCATAAAGATGACATaGTCCAAGGGAGGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: GPLIPCVKASSPSKRWNKTIKMT*SKGGRA
Trigger: TGCCCTCCCTCCCTTGGACAATGTCATCTTTATGGT...CTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CAA 90 bp GGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCACCATAAAGATGACATaGTCCAAGGGAGGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: GKCPESHPGPLIPCVKASTIKMT*SKGGRA
Trigger: TGCCCTCCCTCCCTTGGACAATGTCATCTTTATGGT...GGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS TCA 90 bp CTCTTACAAGGCAGTTTTTCAGTTCAGTGCCTCCCTGTGGCAAAGTaGAGTTCACAGGTGGGTGGCAGAGGTTTAGGCAACCTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LLQGSFSVQCLPVAK*SSQVGGRGLGNLVA
Trigger: TGCCACCAGGTTGCCTAAACCTCTGCCACCCACCTGTGAACTTCACTTTGCCACAGGGAGGCACTGAACTGAAAAACTGCCTTGTAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CAA 90 bp GATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTACCATAAAGATGACATaGTCCAAGGGAGGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: DGKCPESHPGPLIPCVKATIKMT*SKGGRA
Trigger: TGCCCTCCCTCCCTTGGACAATGTCATCTTTATGGT...AGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CAA 90 bp CCCCTGATTCCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATTCAGGCTGGTCCGGTTaGGCATCAGCTTTTTCTAGC +
Preference number: 5 (lower is better)
Translates to: PLIPCVKASSPSKRWNKHSGWSG*ASAFSS
Trigger: GCTAGAAAAAGCTGATGCCAAACCGGACCAGCCTGA...ATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGGAATCAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635322.1
CDS-3UTR CAA 90 bp GGGCAGGTGGCCAACATCCCTTTCAAGGGGATACACCATAAAGATGACATTGTCCCTTTCCCGGTTGCCTaGATCCAAGGCCTGATATGG +
Preference number: 5 (lower is better)
Translates to: GQVANIPFKGIHHKDDIVPFPVA*IQGLIW
Trigger: CCATATCAGGCCTTGGATCAAGGCAACCGGGAAAGG...GACAATGTCATCTTTATGGTGTATCCCCTTGAAAGGGATGTTGGCCACCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635374.1
CDS-3UTR CAA 90 bp ATTGCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGGGCCCACGTACTCCAGGGTaGCAGTCAAACTTTCCCGGT +
Preference number: 5 (lower is better)
Translates to: IALPFIPRMESVLNHIPGPRTPG*QSNFPG
Trigger: ACCGGGAAAGTTTGACTGCAACCCTGGAGTACGTGG...GCCCGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000582415.2
CDS-3UTR CAA 90 bp GGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTTCCACACAGAGTCCACATTaGTCTTCTCTTCCACGTACT +
Preference number: 5 (lower is better)
Translates to: GKCPESHPGPLIPCVKASTQSPH*SSLPRT
Trigger: AGTACGTGGAAGAGAAGACAAATGTGGACTCTGTGT...GGAAGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
CDS-3UTR CAA 90 bp TCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTCTGGGACTGCCACTTaGAGACCTCTGCATATTTAT +
Preference number: 5 (lower is better)
Translates to: SSPSKRWNKHVQGGSLGRSGTAT*RPLHIY
Trigger: ATAAATATGCAGAGGTCTCAAAGTGGCAGTCCCAGA...CCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS GCA 90 bp CACTCATTCCATTATCAGTCAGTAATTCTAGGCGTCCGTCACCTCTaGCAAAAAGCAAAAATAGGCAAGCCGCGGTGCCATCTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: HSFHYQSVILGVRHL*QKAKIGKPRCHLFP
Trigger: GGGGAACAGATGGCACCGCGGCTTGCCTATTTTTGCTTTTTGGCAGAGGTGACGGACGCCTAGAATTACTGACTGATAATGGAATGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CAA 90 bp TTGATGATTGCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCCTGCTCGGTGCTTTaGCCCTCCTGGAGGCCTACT +
Preference number: 5 (lower is better)
Translates to: LMIALPFIPRMESVLNHIPCSVL*PSWRPT
Trigger: AGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGG...GATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGCAATCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400999.7
ENST00000635374.1
CDS-3UTR CAA 90 bp GATGGAAAGTGTCCTGAATCACATCCCGGGCCCCTGATTCCATGTGTCAAGGCTACACAGAGTCCACATTaGTCTTCTCTTCCACGTACT +
Preference number: 5 (lower is better)
Translates to: DGKCPESHPGPLIPCVKATQSPH*SSLPRT
Trigger: AGTACGTGGAAGAGAAGACAAATGTGGACTCTGTGT...AGCCTTGACACATGGAATCAGGGGCCCGGGATGTGATTCAGGACACTTTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000582415.2
ENST00000635322.1
CDS-3UTR CAA 90 bp CATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGACCATAAAGATGACATaGTCCAAGGGAGGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: HVSRLPAPQSVGISMFKETIKMT*SKGGRA
Trigger: TGCCCTCCCTCCCTTGGACAATGTCATCTTTATGGT...CTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CAA 90 bp GGCAGGTGGCCAACATCCCTTTCAAGGGGATACACCATAAAGATGACATTGTCCACCATAAAGATGACATaGTCCAAGGGAGGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: GRWPTSLSRGYTIKMTLSTIKMT*SKGGRA
Trigger: TGCCCTCCCTCCCTTGGACAATGTCATCTTTATGGT...GGACAATGTCATCTTTATGGTGTATCCCCTTGAAAGGGATGTTGGCCACCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS-3UTR CAA 90 bp AAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACTGGGCAGGTGGCCAACATCCTTGGGACAGTTAACTTaGAGGTGTCCTTTGGATACG +
Preference number: 5 (lower is better)
Translates to: KRWNKHVQGGSLGRWPTSLGQLT*RCPLDT
Trigger: CGTATCCAAAGGACACCTCAAAGTTAACTGTCCCAA...GGATGTTGGCCACCTGCCCAGTGAGCCTCCTTGAACATGCTTATTCCAACGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CAA 90 bp CAAGGGAGGGAGGGCAGGGTGATCTGGTCTGACCACCTCAAAGCCCATGTAGCTCCTTTTTCTTTTACCTaGAGTAAAGGAGGAAGTCAT +
Preference number: 5 (lower is better)
Translates to: QGREGRVIWSDHLKAHVAPFSFT*SKGGSH
Trigger: ATGACTTCCTCCTTTACTCAAGGTAAAAGAAAAAGG...AGCTACATGGGCTTTGAGGTGGTCAGACCAGATCACCCTGCCCTCCCTCCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS-3UTR CAA 90 bp CCATGTGTCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGACCACGTACTCCAGGGTaGCAGTCAAACGAATACAGT +
Preference number: 5 (lower is better)
Translates to: PCVKASSPSKRWNKHVQGPRTPG*QSNEYS
Trigger: ACTGTATTCGTTTGACTGCAACCCTGGAGTACGTGG...TCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGACACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479764.7
ENST00000635322.1
CDS GCA 90 bp ACATGGATAAGGGGTCAGCCCTTATGTCACCTCAGGACTCCACTCTaGTGCTTATCTACCCTAATCCCTTATCCAAGGCTCATATTCGAC +
Preference number: 5 (lower is better)
Translates to: TWIRGQPLCHLRTPL*CLSTLIPYPRLIFD
Trigger: GTCGAATATGAGCCTTGGATAAGGGATTAGGGTAGATAAGCAGCAGAGTGGAGTCCTGAGGTGACATAAGGGCTGACCCCTTATCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS GCA 90 bp CAACTTGCTAATGTCCCTCCTCTGCAAGGTATGCAAGAAAAGGGTTaGCCTGTCACAGCACTAGCTCACAGTCCACTTACCGAATACAGT +
Preference number: 5 (lower is better)
Translates to: QLANVPPLQGMQEKG*PVTALAHSPLTEYS
Trigger: ACTGTATTCGGTAAGTGGACTGTGAGCTAGTGCTGTGACAGGGCAACCCTTTTCTTGCATACCTTGCAGAGGAGGGACATTAGCAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635179.1
CDS-3UTR CAA 90 bp TCAAGGCTTCCAGCCCCTCAAAGCGTTGGAATAAGCATGTTCAAGGAGGCTCACACACAGAGTCCACATTaGTCTTCTCTTCCACGTACT +
Preference number: 5 (lower is better)
Translates to: SRLPAPQSVGISMFKEAHTQSPH*SSLPRT
Trigger: AGTACGTGGAAGAGAAGACAAATGTGGACTCTGTGT...GTGAGCCTCCTTGAACATGCTTATTCCAACGCTTTGAGGGGCTGGAAGCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479764.7
ENST00000635322.1
CDS-3UTR CAA 90 bp ATGATTGCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGACCATAAAGATGACATaGTCCAAGGGAGGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: MIALPFIPRMESVLNHIPTIKMT*SKGGRA
Trigger: TGCCCTCCCTCCCTTGGACAATGTCATCTTTATGGT...CGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGCAATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400999.7
ENST00000479764.7
ENST00000635374.1
CDS-3UTR CAA 90 bp ATGATTGCACTACCCTTTATTCCTAGGATGGAAAGTGTCCTGAATCACATCCCGCCACGTACTCCAGGGTaGCAGTCAAACGAATACAGT +
Preference number: 5 (lower is better)
Translates to: MIALPFIPRMESVLNHIPPRTPG*QSNEYS
Trigger: ACTGTATTCGTTTGACTGCAACCCTGGAGTACGTGG...CGGGATGTGATTCAGGACACTTTCCATCCTAGGAATAAAGGGTAGTGCAATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS TCA 90 bp GAGAGTGATCCGGTACTTGTAACAGTAAAGGTAATAGGCGTATGGTaGCCAGATCGGGTAGAGGTAGTTACGTGTTTTTCCCCTCTTGAT +
Preference number: 5 (lower is better)
Translates to: ESDPVLVTVKVIGVW*PDRVEVVTCFSPLD
Trigger: ATCAAGAGGGGAAAAACACGTAACTACCTCTACCCGATCTGGTCACCATACGCCTATTACCTTTACTGTTACAAGTACCGGATCACTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400999.7
ENST00000479764.7
ENST00000577465.1
ENST00000635179.1
CDS TCA 90 bp AAAATCCAGCAAGTAAAGAGTTGGTATCTGACTCTTCCAAGGCTCTaGTCCAGTGGTGACCTGATTAGTTGGTTCCCAGTTCATACCAGT +
Preference number: 5 (lower is better)
Translates to: KIQQVKSWYLTLPRL*SSGDLISWFPVHTS
Trigger: ACTGGTATGAACTGGGAACCAACTAATCAGGTCACCACTGGATCAGAGCCTTGGAAGAGTCAGATACCAACTCTTTACTTGCTGGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS GCA 90 bp GGAGGACTGGTCAGTATGTTTAAGGGCCAGTCTTTCCATAATCTCTaGCAAATGGACCTTCTTTCATCCAGTTTTTATGGTCTTCTGTCC +
Preference number: 5 (lower is better)
Translates to: GGLVSMFKGQSFHNL*QMDLLSSSFYGLLS
Trigger: GGACAGAAGACCATAAAAACTGGATGAAAGAAGGTCCATTTGGCAGAGATTATGGAAAGACTGGCCCTTAAACATACTGACCAGTCCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS TCA 90 bp ATTGAGGGTCTACTATTAGCCAGGCACTATTCTAGGTGCTTGAGATaGTACATCAGTGAACAAAACAAATCCCTGCCCTATGGAACGTAT +
Preference number: 5 (lower is better)
Translates to: IEGLLLARHYSRCLR*YISEQNKSLPYGTY
Trigger: ATACGTTCCATAGGGCAGGGATTTGTTTTGTTCACTGATGTATCATCTCAAGCACCTAGAATAGTGCCTGGCTAATAGTAGACCCTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS CCA 90 bp AACCCACAGGATTTCCTGATGGAGTATGAGAGAAAAGAGTTAGAATaGAAAGAATGGAGTTTCTGTCAACTGAGAGGAAAAAGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: NPQDFLMEYERKELE*KEWSFCQLRGKRLQ
Trigger: CTGCAGCCTTTTTCCTCTCAGTTGACAGAAACTCCATTCTTTCCATTCTAACTCTTTTCTCTCATACTCCATCAGGAAATCCTGTGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS CCA 90 bp TATTTGAGACGAGTTTGGGAGATGTCTAGGATGGAACTAGAAATTTaGGAGTCATTGGCTTATAAATGGTATTGTAAGCCACGAGACTGG +
Preference number: 5 (lower is better)
Translates to: YLRRVWEMSRMELEI*ESLAYKWYCKPRDW
Trigger: CCAGTCTCGTGGCTTACAATACCATTTATAAGCCAATGACTCCCAAATTTCTAGTTCCATCCTAGACATCTCCCAAACTCGTCTCAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS GCA 90 bp CGTTATCTAAAGGAAGTCCACACAACTCAATTCCATCCAGTTCCATaGAAGAATGCAGACTTGATGGTGCTGTATCGTATGATTTTTGAA +
Preference number: 5 (lower is better)
Translates to: RYLKEVHTTQFHPVP*KNADLMVLYRMIFE
Trigger: TTCAAAAATCATACGATACAGCACCATCAAGTCTGCATTCTTGCATGGAACTGGATGGAATTGAGTTGTGTGGACTTCCTTTAGATAACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS CCA 90 bp ATGTCTAGGATGGAACTAGAAATTTGGGAGTCATTGGCTTATAAATaGTATTGTAAGCCACGAGACTGGATGAGATCAACAGTGAGTGTA +
Preference number: 5 (lower is better)
Translates to: MSRMELEIWESLAYK*YCKPRDWMRSTVSV
Trigger: TACACTCACTGTTGATCTCATCCAGTCTCGTGGCTTACAATACCATTTATAAGCCAATGACTCCCAAATTTCTAGTTCCATCCTAGACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS TCA 90 bp ATCTGTAATTTAAAGGTAGAACCCACAGGATTTCCTGATGGAGTATaGGAGAAAAGAGTTAGAATGGAAAGAATGGAGTTTCTGTCAACT +
Preference number: 5 (lower is better)
Translates to: ICNLKVEPTGFPDGV*EKRVRMERMEFLST
Trigger: AGTTGACAGAAACTCCATTCTTTCCATTCTAACTCTTTTCTCTCATACTCCATCAGGAAATCCTGTGGGTTCTACCTTTAAATTACAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS GCA 72 bp CGGCGCGCCGCAGGCAGCACTGGCGGGGGCCTTTCCTaGCGCCGACGCCGGGGTCCTCCCTCAGGTCTCATT +
Preference number: 6 (lower is better)
Translates to: RRAAGSTGGGLS*RRRRGPPSGLI
Trigger: AATGAGACCTGAGGGAGGACCCCGGCGTCGGCGGCAGGAAAGGCCCCCGCCAGTGCTGCCTGCGGCGCGCCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453029.2
CDS CCA 72 bp CCTGGCCGCCAGGGCACGGTCATCGTGGAGCGCTGGTaGAAGGTACCGCTGGCCGGGGAGGGCCGGAAGCCG +
Preference number: 6 (lower is better)
Translates to: PGRQGTVIVERW*KVPLAGEGRKP
Trigger: CGGCTTCCGGCCCTCCCCGGCCAGCGGTACCTTCCACCAGCGCTCCACGATGACCGTGCCCTGGCGGCCAGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321531.10
ENST00000635322.1
CDS CCA 72 bp TTGCCCTCCTGGAGGCCTACTAGGGACTCGGAGCACTaGAGGCAGGAACGGGGCTGGAGTGTCAAGTCCTCC +
Preference number: 6 (lower is better)
Translates to: LPSWRPTRDSEH*RQERGWSVKSS
Trigger: GGAGGACTTGACACTCCAGCCCCGTTCCTGCCTCCAGTGCTCCGAGTCCCTAGTAGGCCTCCAGGAGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
CDS CCA 72 bp TGCCCTCCTGGAGGCCTACTAGGGACTCAGGAGCACTaGAGGCAGGAACGGGGCTGGAGTGTCAAGTCCTCC +
Preference number: 6 (lower is better)
Translates to: CPPGGLLGTQEH*RQERGWSVKSS
Trigger: GGAGGACTTGACACTCCAGCCCCGTTCCTGCCTCCAGTGCTCCTGAGTCCCTAGTAGGCCTCCAGGAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577465.1
ENST00000635179.1
CDS CAA 72 bp CCCGGGCCGAGGCGCTTCCTCTCAGGCTGGTCCGGTTaGGCATCAGCTTTTTCTAGCCCGTCCCCCTCAACT +
Preference number: 6 (lower is better)
Translates to: PGPRRFLSGWSG*ASAFSSPSPST
Trigger: AGTTGAGGGGGACGGGCTAGAAAAAGCTGATGCCAAACCGGACCAGCCTGAGAGGAAGCGCCTCGGCCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635322.1
CDS CCA 72 bp CCGGGCCGAGGCGCTTCCTCTCAGGCTGGTCCGGTTTaGCATCAGCTTTTTCTAGCCCGTCCCCCTCAACTA +
Preference number: 6 (lower is better)
Translates to: PGRGASSQAGPV*HQLFLARPPQL
Trigger: TAGTTGAGGGGGACGGGCTAGAAAAAGCTGATGCCAAACCGGACCAGCCTGAGAGGAAGCGCCTCGGCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635322.1
CDS CAA 90 bp AGAGTAAGGCCCGGGCCGAGGCGCTTCCTCTCAGGCTGGTCCGGTTaGGCATCAGCTTTTTCTAGCCCGTCCCCCTCAACTATTTGCCTT +
Preference number: 6 (lower is better)
Translates to: RVRPGPRRFLSGWSG*ASAFSSPSPSTICL
Trigger: AAGGCAAATAGTTGAGGGGGACGGGCTAGAAAAAGCTGATGCCAAACCGGACCAGCCTGAGAGGAAGCGCCTCGGCCCGGGCCTTACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635322.1
CDS GCA 72 bp ATATCCAGGAAGAGTCGACGGTCACAGAGAAGGCCGTaGCAATGGGCAGAGGTCTGGGAGGTAAGGCGGAAG +
Preference number: 6 (lower is better)
Translates to: ISRKSRRSQRRP*QWAEVWEVRRK
Trigger: CTTCCGCCTTACCTCCCAGACCTCTGCCCATTGGCACGGCCTTCTCTGTGACCGTCGACTCTTCCTGGATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000635374.1
CDS CAA 72 bp TCTTTAAGCTGGTCGTGGTTACCCTGCTCGGTGCTTTaGCCCTCCTGGAGGCCTACTAGGGACTCGGAGCAC +
Preference number: 6 (lower is better)
Translates to: SLSWSWLPCSVL*PSWRPTRDSEH
Trigger: GTGCTCCGAGTCCCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS CAA 72 bp CTGAAGGCCCGCAGCAGGGCACCTTTCCCGGTTGCCTaGATCCAAGGCCTGATATGGGATATCCAGGAAGAG +
Preference number: 6 (lower is better)
Translates to: LKARSRAPFPVA*IQGLIWDIQEE
Trigger: CTCTTCCTGGATATCCCATATCAGGCCTTGGATCAAGGCAACCGGGAAAGGTGCCCTGCTGCGGGCCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635374.1
CDS CAA 90 bp GAATACAGTTCTTTAAGCTGGTCGTGGTTACCCTGCTCGGTGCTTTaGCCCTCCTGGAGGCCTACTAGGGACTCGGAGCACTGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: EYSSLSWSWLPCSVL*PSWRPTRDSEHWRQ
Trigger: CTGCCTCCAGTGCTCCGAGTCCCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000479764.7
ENST00000635322.1
ENST00000635374.1
CDS TCA 72 bp TGCCAATGGGCAGAGGTCTGGGAGGTAAGGCGGAAGTaGAAGTCTAACTGTACTGGGTCCTGGTGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: CQWAEVWEVRRK*KSNCTGSWWSR
Trigger: CCTGCTCCACCAGGACCCAGTACAGTTAGACTTTCACTTCCGCCTTACCTCCCAGACCTCTGCCCATTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000577465.1
ENST00000635374.1
CDS CAA 72 bp TCTTTAAGCTGGTCGTGGTTACCCTGCTCGGTGCTTTaGCCCTCCTGGAGGCCTACTAGGGACTCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: SLSWSWLPCSVL*PSWRPTRDSGA
Trigger: TGCTCCTGAGTCCCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577465.1
ENST00000635179.1
CDS CAA 90 bp GAATACAGTTCTTTAAGCTGGTCGTGGTTACCCTGCTCGGTGCTTTaGCCCTCCTGGAGGCCTACTAGGGACTCAGGAGCACTGGAGGCA +
Preference number: 6 (lower is better)
Translates to: EYSSLSWSWLPCSVL*PSWRPTRDSGALEA
Trigger: TGCCTCCAGTGCTCCTGAGTCCCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577465.1
ENST00000635179.1
CDS TCA 72 bp GTGGGTGGCAGAGGTTTAGGCAACCTGGTGGCATTGTaGCCCAGTGGGCACTATGACATGGATAAGGGGTCA +
Preference number: 6 (lower is better)
Translates to: VGGRGLGNLVAL*PSGHYDMDKGS
Trigger: TGACCCCTTATCCATGTCATAGTGCCCACTGGGTCACAATGCCACCAGGTTGCCTAAACCTCTGCCACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS GCA 72 bp GCCGAATACAGTTCTTTAAGCTGGTCGTGGTTACCCTaGTCGGTGCTTTTGCCCTCCTGGAGGCCTACTAGG +
Preference number: 6 (lower is better)
Translates to: AEYSSLSWSWLP*SVLLPSWRPTR
Trigger: CCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000577465.1
ENST00000635374.1
CDS GCA 72 bp AACTTGAAGACTTCTGTACTGGTTGGCCAAAAGCCCTaGCTGAGCACTTGTGCCCACCCACCCTGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: NLKTSVLVGQKP*LSTCAHPPCSS
Trigger: AGAGGAGCAGGGTGGGTGGGCACAAGTGCTCAGGCAGGGCTTTTGGCCAACCAGTACAGAAGTCTTCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS CCA 72 bp ATGGGGAGAGCCGAATACAGTTCTTTAAGCTGGTCGTaGTTACCCTGCTCGGTGCTTTTGCCCTCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: MGRAEYSSLSWS*LPCSVLLPSWR
Trigger: CCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTCGGCTCTCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577465.1
CDS GCA 72 bp ACCGAATACAGTTCTTTAAGCTGGTCGTGGTTACCCTaGTCGGTGCTTTTGCCCTCCTGGAGGCCTACTAGG +
Preference number: 6 (lower is better)
Translates to: TEYSSLSWSWLP*SVLLPSWRPTR
Trigger: CCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635179.1
CDS CCA 72 bp AAGTTCCCAGCCGAATACAGTTCTTTAAGCTGGTCGTaGTTACCCTGCTCGGTGCTTTTGCCCTCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: KFPAEYSSLSWS*LPCSVLLPSWR
Trigger: CCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTCGGCTGGGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000635374.1
CDS CCA 72 bp ACCGTCAAGTTCCCAGCCGAATACAGTTCTTTAAGCTaGTCGTGGTTACCCTGCTCGGTGCTTTTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: TVKFPAEYSSLS*SWLPCSVLLPS
Trigger: GGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTCGGCTGGGAACTTGACGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000635374.1
CDS CCA 72 bp ACCTGGTGGCATTGTGACCCAGTGGGCACTATGACATaGATAAGGGGTCAGCCCTTATGTCACCTCAGGACT +
Preference number: 6 (lower is better)
Translates to: TWWHCDPVGTMT*IRGQPLCHLRT
Trigger: AGTCCTGAGGTGACATAAGGGCTGACCCCTTATCCATGTCATAGTGCCCACTGGGTCACAATGCCACCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS CCA 72 bp GCATTGATGGGGAGAGCCGAATACAGTTCTTTAAGCTaGTCGTGGTTACCCTGCTCGGTGCTTTTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: ALMGRAEYSSLS*SWLPCSVLLPS
Trigger: GGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTCGGCTCTCCCCATCAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577465.1
CDS CCA 72 bp GCACCTTTCCCGGTTGCCTTGATCCAAGGCCTGATATaGGATATCCAGGAAGAGTCGACGGTCACAGAGAAG +
Preference number: 6 (lower is better)
Translates to: APFPVALIQGLI*DIQEESTVTEK
Trigger: CTTCTCTGTGACCGTCGACTCTTCCTGGATATCCCATATCAGGCCTTGGATCAAGGCAACCGGGAAAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635374.1
CDS TCA 72 bp GGCAGTTTTTCAGTTCAGTGCCTCCCTGTGGCAAAGTaGAGTTCACAGGTGGGTGGCAGAGGTTTAGGCAAC +
Preference number: 6 (lower is better)
Translates to: GSFSVQCLPVAK*SSQVGGRGLGN
Trigger: GTTGCCTAAACCTCTGCCACCCACCTGTGAACTTCACTTTGCCACAGGGAGGCACTGAACTGAAAAACTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400999.7
ENST00000479764.7
CDS GCA 72 bp AGGGGTCAGCCCTTATGTCACCTCAGGACTCCACTCTaGTGCTTATCTACCCTAATCCCTTATCCAAGGCTC +
Preference number: 6 (lower is better)
Translates to: RGQPLCHLRTPL*CLSTLIPYPRL
Trigger: GAGCCTTGGATAAGGGATTAGGGTAGATAAGCAGCAGAGTGGAGTCCTGAGGTGACATAAGGGCTGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS GCA 72 bp AACGAATACAGTTCTTTAAGCTGGTCGTGGTTACCCTaGTCGGTGCTTTTGCCCTCCTGGAGGCCTACTAGG +
Preference number: 6 (lower is better)
Translates to: NEYSSLSWSWLP*SVLLPSWRPTR
Trigger: CCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479764.7
ENST00000635322.1
CDS CCA 72 bp AATTGTCTAGGCCCCTTCAGGGGCCTAGACAGCTTATaGAAATTAGTGGAGTGGCAGGGTAGGGCTGTAGCA +
Preference number: 6 (lower is better)
Translates to: NCLGPFRGLDSL*KLVEWQGRAVA
Trigger: TGCTACAGCCCTACCCTGCCACTCCACTAATTTCCATAAGCTGTCTAGGCCCCTGAAGGGGCCTAGACAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS CCA 72 bp CCAGGGTTGCAGTCAAACGAATACAGTTCTTTAAGCTaGTCGTGGTTACCCTGCTCGGTGCTTTTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: PGLQSNEYSSLS*SWLPCSVLLPS
Trigger: GGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTCGTTTGACTGCAACCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479764.7
ENST00000635322.1
CDS CCA 72 bp AGTCCACTTACCGAATACAGTTCTTTAAGCTGGTCGTaGTTACCCTGCTCGGTGCTTTTGCCCTCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: SPLTEYSSLSWS*LPCSVLLPSWR
Trigger: CCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTCGGTAAGTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635179.1
CDS CCA 72 bp GCTCACAGTCCACTTACCGAATACAGTTCTTTAAGCTaGTCGTGGTTACCCTGCTCGGTGCTTTTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: AHSPLTEYSSLS*SWLPCSVLLPS
Trigger: GGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTCGGTAAGTGGACTGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635179.1
CDS GCA 72 bp ATATCCAGGAAGAGTCGACGGTCACAGAGAAGGCCGTaGCAATGGGCAGAGGTCGAATACAGTTCTTTAAGC +
Preference number: 6 (lower is better)
Translates to: ISRKSRRSQRRP*QWAEVEYSSLS
Trigger: GCTTAAAGAACTGTATTCGACCTCTGCCCATTGGCACGGCCTTCTCTGTGACCGTCGACTCTTCCTGGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582415.2
CDS GCA 72 bp AATGTCCCTCCTCTGCAAGGTATGCAAGAAAAGGGTTaGCCTGTCACAGCACTAGCTCACAGTCCACTTACC +
Preference number: 6 (lower is better)
Translates to: NVPPLQGMQEKG*PVTALAHSPLT
Trigger: GGTAAGTGGACTGTGAGCTAGTGCTGTGACAGGGCAACCCTTTTCTTGCATACCTTGCAGAGGAGGGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635179.1
CDS CCA 72 bp CAAACTTTCCCGGTTGCCTTGATCCAAGGCCTGATATaGGATATCCAGGAAGAGTCGACGGTCACAGAGAAG +
Preference number: 6 (lower is better)
Translates to: QTFPVALIQGLI*DIQEESTVTEK
Trigger: CTTCTCTGTGACCGTCGACTCTTCCTGGATATCCCATATCAGGCCTTGGATCAAGGCAACCGGGAAAGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000582415.2
CDS CCA 72 bp TTGCAGTCAAACGAATACAGTTCTTTAAGCTGGTCGTaGTTACCCTGCTCGGTGCTTTTGCCCTCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: LQSNEYSSLSWS*LPCSVLLPSWR
Trigger: CCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGAACTGTATTCGTTTGACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479764.7
ENST00000635322.1
CDS CAA 72 bp GTACTCCAGGGTTGCAGTCAAACTTTCCCGGTTGCCTaGATCCAAGGCCTGATATGGGATATCCAGGAAGAG +
Preference number: 6 (lower is better)
Translates to: VLQGCSQTFPVA*IQGLIWDIQEE
Trigger: CTCTTCCTGGATATCCCATATCAGGCCTTGGATCAAGGCAACCGGGAAAGTTTGACTGCAACCCTGGAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321531.10
ENST00000400999.7
ENST00000453029.2
ENST00000582415.2
CDS CCA 72 bp TCTTACAAGGCAGTTTTTCAGTTCAGTGCCTCCCTGTaGCAAAGTGAAGTTCACAGGTGGGTGGCAGAGGTT +
Preference number: 6 (lower is better)
Translates to: SYKAVFQFSASL*QSEVHRWVAEV
Trigger: AACCTCTGCCACCCACCTGTGAACTTCACTTTGCCACAGGGAGGCACTGAACTGAAAAACTGCCTTGTAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400999.7
ENST00000479764.7
CDS CAA 90 bp TGCAGTAATCCAGGAGAAAGTAGTGTCTTATTCCAAGGTAGAGCATaGGAGGTGGTGACAAGTGGCTGGATTCTGGAAATACAAGTGCTC +
Preference number: 6 (lower is better)
Translates to: CSNPGESSVLFQGRA*EVVTSGWILEIQVL
Trigger: GAGCACTTGTATTTCCAGAATCCAGCCACTTGTCACCACCTCCAATGCTCTACCTTGGAATAAGACACTACTTTCTCCTGGATTACTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS TCA 72 bp CCGGTACTTGTAACAGTAAAGGTAATAGGCGTATGGTaGCCAGATCGGGTAGAGGTAGTTACGTGTTTTTCC +
Preference number: 6 (lower is better)
Translates to: PVLVTVKVIGVW*PDRVEVVTCFS
Trigger: GGAAAAACACGTAACTACCTCTACCCGATCTGGTCACCATACGCCTATTACCTTTACTGTTACAAGTACCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000400999.7
ENST00000479764.7
ENST00000577465.1
ENST00000635179.1
CDS TCA 72 bp CAAGTAAAGAGTTGGTATCTGACTCTTCCAAGGCTCTaGTCCAGTGGTGACCTGATTAGTTGGTTCCCAGTT +
Preference number: 6 (lower is better)
Translates to: QVKSWYLTLPRL*SSGDLISWFPV
Trigger: AACTGGGAACCAACTAATCAGGTCACCACTGGATCAGAGCCTTGGAAGAGTCAGATACCAACTCTTTACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS GCA 72 bp TGTAATTCATCTTCCAACTTGCTAATGTCCCTCCTCTaGAAGGTATGCAAGAAAAGGGTTGCCCTGTCACAG +
Preference number: 6 (lower is better)
Translates to: CNSSSNLLMSLL*KVCKKRVALSQ
Trigger: CTGTGACAGGGCAACCCTTTTCTTGCATACCTTGCAGAGGAGGGACATTAGCAAGTTGGAAGATGAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635179.1
CDS CCA 72 bp AGGAGGCCAAGTAGTGTATTTAGGAGGAAGGAGGACTaGTCAGTATGTTTAAGGGCCAGTCTTTCCATAATC +
Preference number: 6 (lower is better)
Translates to: RRPSSVFRRKED*SVCLRASLSII
Trigger: GATTATGGAAAGACTGGCCCTTAAACATACTGACCAGTCCTCCTTCCTCCTAAATACACTACTTGGCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS CAA 72 bp CCAGGAGAAAGTAGTGTCTTATTCCAAGGTAGAGCATaGGAGGTGGTGACAAGTGGCTGGATTCTGGAAATA +
Preference number: 6 (lower is better)
Translates to: PGESSVLFQGRA*EVVTSGWILEI
Trigger: TATTTCCAGAATCCAGCCACTTGTCACCACCTCCAATGCTCTACCTTGGAATAAGACACTACTTTCTCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS TCA 72 bp TTTTATAACAACGAGGCAGCATCTTCTCCCGGAGAGTaGTCCGGTACTTGTAACAGTAAAGGTAATAGGCGT +
Preference number: 6 (lower is better)
Translates to: FYNNEAASSPGE*SGTCNSKGNRR
Trigger: ACGCCTATTACCTTTACTGTTACAAGTACCGGATCACTCTCCGGGAGAAGATGCTGCCTCGTTGTTATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400999.7
ENST00000479764.7
ENST00000577465.1
ENST00000635179.1
CDS GCA 72 bp AAGGAAGTCCACACAACTCAATTCCATCCAGTTCCATaGAAGAATGCAGACTTGATGGTGCTGTATCGTATG +
Preference number: 6 (lower is better)
Translates to: KEVHTTQFHPVP*KNADLMVLYRM
Trigger: CATACGATACAGCACCATCAAGTCTGCATTCTTGCATGGAACTGGATGGAATTGAGTTGTGTGGACTTCCTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS CCA 72 bp TTCCAAGGTAGAGCATTGGAGGTGGTGACAAGTGGCTaGATTCTGGAAATACAAGTGCTCCTTGACTTAAAA +
Preference number: 6 (lower is better)
Translates to: FQGRALEVVTSG*ILEIQVLLDLK
Trigger: TTTTAAGTCAAGGAGCACTTGTATTTCCAGAATCCAGCCACTTGTCACCACCTCCAATGCTCTACCTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS TCA 72 bp CTACTATTAGCCAGGCACTATTCTAGGTGCTTGAGATaGTACATCAGTGAACAAAACAAATCCCTGCCCTAT +
Preference number: 6 (lower is better)
Translates to: LLLARHYSRCLR*YISEQNKSLPY
Trigger: ATAGGGCAGGGATTTGTTTTGTTCACTGATGTATCATCTCAAGCACCTAGAATAGTGCCTGGCTAATAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS CAA 72 bp GAGATGTCTAGGATGGAACTAGAAATTTGGGAGTCATaGGCTTATAAATGGTATTGTAAGCCACGAGACTGG +
Preference number: 6 (lower is better)
Translates to: EMSRMELEIWES*AYKWYCKPRDW
Trigger: CCAGTCTCGTGGCTTACAATACCATTTATAAGCCAATGACTCCCAAATTTCTAGTTCCATCCTAGACATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS CAA 72 bp ACTCAATTCCATCCAGTTCCATGCAAGAATGCAGACTaGATGGTGCTGTATCGTATGATTTTTGAACAGAAA +
Preference number: 6 (lower is better)
Translates to: TQFHPVPCKNAD*MVLYRMIFEQK
Trigger: TTTCTGTTCAAAAATCATACGATACAGCACCATCAAGTCTGCATTCTTGCATGGAACTGGATGGAATTGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS GCA 72 bp AAAAACAACATTGTAAGCAAAATTTGGTTCTGGGACTaGCACTTTGAGACCTCTGCATATTTATCCATTCAA +
Preference number: 6 (lower is better)
Translates to: KNNIVSKIWFWD*HFETSAYLSIQ
Trigger: TTGAATGGATAAATATGCAGAGGTCTCAAAGTGGCAGTCCCAGAACCAAATTTTGCTTACAATGTTGTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479764.7
CDS TCA 72 bp AAGGAGGAAGTCATTACAAAGTTTTGGGTGGAAGAATaGCATGATCTGACTTATGCTTTAAAAAGATCATTC +
Preference number: 6 (lower is better)
Translates to: KEEVITKFWVEE*HDLTYALKRSF
Trigger: GAATGATCTTTTTAAAGCATAAGTCAGATCATGTCATTCTTCCACCCAAAACTTTGTAATGACTTCCTCCTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479764.7